Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0006369

Physical Location & Seq

Genomic Coordinates Forward (+)

13202911 .. 13206720

Gene Structure 3810 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g08120.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGGTGCACTTTGGCCCAAACACTTCGCCAAGCCCAAAAACTAAAATCCAAAAGAAAACAAAAACCGCGAAAAGAAAACCCGCCGCTCGCCACGTCAGCACTAAACCCCCTATCCCCTTCCCCATCGCCAAAACCTCTCCCTCTCTCTCATCAGTCTCTGCAACCTCAATCTCTCTCATGGCCTTCACTTTCCTCTCAATCCCCCACTTTCTCTCTCCTCAACCCCACTTTCTCTCTCTAAGACCCAATTTCACCTCCCTCAAACCCTCAATTCCCTCCCTTTCCACCCGGCCGATTAAGCCCACCCACGCAATCGGGCCGGACGGCAAATACTACCCGGACCCGGCCGACGACGACCCGCCGGAAGCCCCGGAAGACTCGGGCCACGGAGTGTCCAAGTTCCAGCAAATCCAGCGGCAGGCCTCGCGCCACCGCAAGCTCCAAGAGGAAGACTACTTAAAGCACCAGGACACCTTCCTCAACGCCATTGCTGACGTGGAGGACGCGCCGGAGAATCCCAATTCCGTAGTCAACGACAACTCCGGGGACGATTTTTTTGGCGACATCGACCAGGCGATTGCCTTGAAACGCAAGGAGTTTGTGAAGCAGGGGCTTCTGAAGCCAAACCCTAAGAAAGAGATTGTGGCGGTTGACGAATTGGACCCTGAGGAGGTAGTGGATTTGGAGGAGATTGAGGAGCTTCAGGGGATTAGGGTTGTTGGCGAGGACGAAGAGGAAGACGGGCCGGAGAAATTCGATCCCAAGGTCAGTGATTTGGATGGTAAAGATGGGATTTTGCGTTTGAATTCTGAATTTGATTTGGATTTTGATAATTATGGTAAAACTAGGGCTAGGATTGTGGAACCTAAGTTTAAAATGAGCTTGGCTGAGCTTTTGGATGAGAGTAAAGTGGTACCCGTGTCGGTTTATGGTGACTTAGAGGTTGAGATTACAGGAATTCAACACGATTCGAGGGTGGTTAATGCCGGTGATTTGTTTGTGTGCTGTATTGGGAGCAAGACCGACGGGCATTTGTATTTGAGTGAGGCTATTAAGAGAGGTGCGGTGGCTGTTGTAGCTAGTAAAGAGATATACATGGAGGAAAGTCTGGGGTGTAAGGCATTGGTCATTGTGGAAGATACAAATGCGGATTTACCTGCATTGGCTGCGTCGTTTTATCGGTACCCGTCGAAGAATATGGCGGTGATTGGGATAACGGGAACAAATGGGAAGACCACAACTGCATATTTGATAAAGGGTATGTATGAAGCGATGGGATTGAGGACCGGTATGTTGAGTACAGTTGCATATTATGTGCATGGGGATAATAAGTTGGAGTCACCTAACACGACCCCGGATGCTGTTTTGGTTCAAAATTTGATGGCTAAGATGCTCCATAATGGGGCTGAAGCCGTTGTCATGGAGGCTTCTTCTCATGGTCTTGCTCTATCCAGGTGCGATGAAGTTGACTTTGACATAGCAGTTTTCACAAATTTAACGAGAGACCATCTGGATTTTCACAAGACTGAGGAGGAGTATAGGGATGCAAAGGCTAAGTTGTTTTCAAGGATGATGGATCCGGAACGGCACAGGAAAGTTGTGAACATTGATGATCCGAATGCAACCTTCTTTATTGCACAAGGCAACCCAGATGTTCCGGTTGTGACCTTTGCCATGGAGAATACGAATGCAGACGTTCACCCCTTGAAGTTTGAACTTTCCTTGTTTGAGACACAGGTTTTAGTCAATACTCCAAATGGTATATTGGAGATATCATCAGGCTTACTTGGAAGACATAATATATACAATATACTGGCTGCTGTGGCTGTTGGGATTGCAGTCGGAGCACCATTGGAGGATATCGTTAGAGGAATTGAAGAGGTTGATGCAGTTCCAGGGAGGTGTGAATTAATAGATGAGGAACAGGCCTTTGGAGTAATTGTGGACTATGCTCATACTCCTGATGCCTTGTCTAGGCTATTGGATTCTGTAAGGGAGCTTGGTTCAAGGAGGATTATTACTGTAATTGGTTGTCCTGGAGAGAGTGACAGAGGGAAAAGACCCATGATGACGAAGATTGCAACAGATAAAAGTGACGTGACCATACTGACGTCTGACAATCCAAAGAATGAAGATCCATTGGACATCTTGGATGATATGTTGGCTGGTGTAGGATGGACAATGCAAGATTACTTAAAACACGGGGAGAACGATTACTACCCACCTCTTGCAAATGGTCATAGGCTTTTCCTTCATGATATTAGACGAGTAGCTGTACGTTGTGCTGTTGCCATGGGCGAGGAAGGTGATATGGTTGTGGTTGCTGGCAAAGGGCATGAAGCATATCAGATCGAAGGTGACAAAAAAGAGTTCTTTGATGACCGGGAAGAGTGCCGAGAGGCATTACAGTACGTTGATGAGCTTCACCAAGCTGGAATAGACACAAGTGAATTTCCATGGAGGTTACCTGAAAGTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009295 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010020 GO:0010468 GO:0016043 GO:0019222 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044424 GO:0044444 GO:0044464 GO:0048285 GO:0050789 GO:0060255 GO:0065007 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mur_ligase Mur_ligase_C Mur_ligase_M

Protein Analysis

827

Amino Acids

91.29

Weight (kDa)

4.94

Isoelectric Point (pI)

38.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63680 AT1G63680 AT1G63680
fragaria_vesca	FvH4_5g02610 FvH4_5g02610 FvH4_5g02610 FvH4_5g02610
malus_domestica	MD06G1085100.v1.1 MD14G1106100.v1.1 MD14G1106300.v1.1
prunus_persica	Prupe.5G101100_v2.0.a1
pyrus_communis	pycom06g08120
rosa_chinensis	RchiOBHm_Chr7g0197491
rosa_laevigata	RLG00000003936 RLG00000003970
rosa_multiflora	Rmu_co8124254.1_g000001 Rmu_co8184758.1_g000001 Rmu_sc0002167.1_g000003 Rmu_sc0013361.1_g000005
rosa_roxburghii	Rroxscaffold_3G00258420
rosa_rugosa	Rorug07G0040000 Rorug07G0040100
rosa_samantha	Rh7AG165200 Rh7BG167300 Rh7CG173700 Rh7DG166600
rosa_wichuraiana	Rw7G014400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2114
Acc36I	ACCTGC	1 cut(s)	1165
Acc65I	GGTACC	2 cut(s)	913, 1182
AccB1I	GGYRCC	2 cut(s)	913, 1182
AccBSI	CCGCTC	1 cut(s)	86
AccII	CGCG	3 cut(s)	68, 427, 506
AccIII	TCCGGA	1 cut(s)	1579
AclWI	GGATC	5 cut(s)	752, 1571, 1584, 1607, 2129
AcoI	YGGCCR	2 cut(s)	290, 345
AcsI	RAATTY	7 cut(s)	752, 805, 812, 957, 1375, 1492, 2450
AcuI	CTGAAG	3 cut(s)	638, 686, 1428
AcyI	GRCGYC	1 cut(s)	2111
AdeI	CACNNNGTG	1 cut(s)	391
AfaI	GTAC	5 cut(s)	915, 1184, 1300, 2277, 2411
AfiI	CCNNNNNNNGG	5 cut(s)	343, 418, 670, 1402, 1974
AgeI	ACCGGT	1 cut(s)	1286
AgsI	TTSAA	9 cut(s)	586, 805, 962, 1373, 1566, 1708, 1715, 1877, 2007
AjiI	CACGTC	3 cut(s)	94, 496, 2098
AjnI	CCWGG	5 cut(s)	465, 570, 1451, 1894, 2035
AjuI	GAANNNNNNNTTGG	2 cut(s)	1914, 1946
AluBI	AGCT	9 cut(s)	439, 700, 882, 892, 1079, 1999, 2273, 2422, 2432
AluI	AGCT	9 cut(s)	439, 700, 882, 892, 1079, 1999, 2273, 2422, 2432
Alw21I	GWGCWC	2 cut(s)	9, 1849
Alw26I	GTCTC	3 cut(s)	160, 1497, 1724
Alw44I	GTGCAC	1 cut(s)	5
AlwI	GGATC	5 cut(s)	752, 1571, 1584, 1607, 2129
AlwNI	CAGNNNCTG	1 cut(s)	158
Ama87I	CYCGRG	1 cut(s)	379
Aor13HI	TCCGGA	1 cut(s)	1579
AoxI	GGCC	9 cut(s)	13, 180, 290, 317, 345, 382, 420, 743, 1926
ApaLI	GTGCAC	1 cut(s)	5
ApeKI	GCWGC	2 cut(s)	1166, 1817
ApoI	RAATTY	7 cut(s)	752, 805, 812, 957, 1375, 1492, 2450
ArsI	GACNNNNNNTTYG	2 cut(s)	539, 571
AseI	ATTAAT	1 cut(s)	1910
AsiGI	ACCGGT	1 cut(s)	1286
Asp718I	GGTACC	2 cut(s)	913, 1182
AspLEI	GCGC	2 cut(s)	429, 508
AspS9I	GGNCC	7 cut(s)	14, 317, 340, 382, 661, 743, 1284
AsuC2I	CCSGG	7 cut(s)	289, 338, 344, 371, 544, 1355, 2384
AsuHPI	GGTGA	9 cut(s)	244, 944, 1001, 1216, 1332, 1691, 2318, 2369, 2417
AvaI	CYCGRG	1 cut(s)	379
AvaII	GGWCC	3 cut(s)	340, 661, 1284
AxyI	CCTNAGG	1 cut(s)	666
BaeGI	GKGCMC	1 cut(s)	9
BaeI	ACNNNNGTAYC	2 cut(s)	905, 938
BamHI	GGATCC	1 cut(s)	1576
BanI	GGYRCC	2 cut(s)	913, 1182
BbsI	GAAGAC	5 cut(s)	381, 456, 744, 1238, 1798
Bbv12I	GWGCWC	2 cut(s)	9, 1849
BbvI	GCAGC	2 cut(s)	1153, 1804
BccI	CCATC	8 cut(s)	131, 773, 782, 1267, 1375, 1515, 1567, 2169
BceAI	ACGGC	3 cut(s)	340, 1397, 1601
BciT130I	CCWGG	5 cut(s)	467, 572, 1453, 1896, 2037
BcnI	CCSGG	7 cut(s)	289, 338, 344, 371, 544, 1355, 2384
BcoDI	GTCTC	3 cut(s)	160, 1497, 1724
BfaI	CTAG	4 cut(s)	846, 852, 1080, 1974
BfuAI	ACCTGC	1 cut(s)	1165
BisI	GCNGC	4 cut(s)	84, 416, 1167, 1818
BlpI	GCTNAGC	1 cut(s)	888
BlsI	GCNGC	4 cut(s)	85, 417, 1168, 1819
Bme18I	GGWCC	3 cut(s)	340, 661, 1284
BmeT110I	CYCGRG	1 cut(s)	379
BmgBI	CACGTC	3 cut(s)	94, 496, 2098
BmgT120I	GGNCC	7 cut(s)	14, 317, 340, 382, 661, 743, 1284
BmiI	GGNNCC	6 cut(s)	342, 663, 864, 915, 1184, 1578
BmsI	GCATC	5 cut(s)	1348, 1380, 1534, 1876, 1954
BpiI	GAAGAC	5 cut(s)	381, 456, 744, 1238, 1798
BpmI	CTGGAG	1 cut(s)	2058
Bpu1102I	GCTNAGC	1 cut(s)	888
BpuMI	CCSGG	7 cut(s)	289, 338, 344, 371, 544, 1355, 2384
BsaHI	GRCGYC	1 cut(s)	2111
BsaI	GGTCTC	1 cut(s)	1497
BsaJI	CCNNGG	9 cut(s)	369, 385, 543, 762, 1353, 1674, 1895, 2292, 2456
BsaWI	WCCGGW	3 cut(s)	1286, 1579, 1657
BsaXI	ACNNNNNCTCC	4 cut(s)	524, 554, 1926, 1956
Bsc4I	CCNNNNNNNGG	5 cut(s)	343, 418, 670, 1402, 1974
Bse118I	RCCGGY	2 cut(s)	986, 1286
Bse1I	ACTGG	1 cut(s)	1818
Bse21I	CCTNAGG	1 cut(s)	666
Bse3DI	GCAATG	1 cut(s)	486
BseAI	TCCGGA	1 cut(s)	1579
BseBI	CCWGG	5 cut(s)	467, 572, 1453, 1896, 2037
BseDI	CCNNGG	9 cut(s)	369, 385, 543, 762, 1353, 1674, 1895, 2292, 2456
BseGI	GGATG	7 cut(s)	784, 904, 1363, 1549, 1575, 2158, 2180
BseLI	CCNNNNNNNGG	5 cut(s)	343, 418, 670, 1402, 1974
BseMI	GCAATG	1 cut(s)	486
BseMII	CTCAG	3 cut(s)	657, 879, 1518
BseNI	ACTGG	1 cut(s)	1818
BseRI	GAGGAG	6 cut(s)	207, 683, 701, 710, 1544, 1547
BseSI	GKGCMC	1 cut(s)	9
BseX3I	CGGCCG	2 cut(s)	290, 345
BseXI	GCAGC	2 cut(s)	1153, 1804
Bsh1236I	CGCG	3 cut(s)	68, 427, 506
Bsh1285I	CGRYCG	2 cut(s)	293, 348
BshFI	GGCC	9 cut(s)	15, 182, 292, 319, 347, 384, 422, 745, 1928
BshNI	GGYRCC	2 cut(s)	913, 1182
BshTI	ACCGGT	1 cut(s)	1286
BsiEI	CGRYCG	2 cut(s)	293, 348
BsiHKAI	GWGCWC	2 cut(s)	9, 1849
BsiHKCI	CYCGRG	1 cut(s)	379
BslFI	GGGAC	1 cut(s)	560
BslI	CCNNNNNNNGG	5 cut(s)	343, 418, 670, 1402, 1974
BsmAI	GTCTC	3 cut(s)	160, 1497, 1724
BsmFI	GGGAC	1 cut(s)	560
BsmI	GAATGC	2 cut(s)	1624, 1693
BsnI	GGCC	9 cut(s)	15, 182, 292, 319, 347, 384, 422, 745, 1928
Bso31I	GGTCTC	1 cut(s)	1497
BsoBI	CYCGRG	1 cut(s)	379
Bsp1286I	GDGCHC	2 cut(s)	9, 1849
Bsp13I	TCCGGA	1 cut(s)	1579
Bsp143I	GATC	5 cut(s)	757, 1576, 1612, 2134, 2349
Bsp1720I	GCTNAGC	1 cut(s)	888
Bsp19I	CCATGG	3 cut(s)	1674, 2292, 2456
BspANI	GGCC	9 cut(s)	15, 182, 292, 319, 347, 384, 422, 745, 1928
BspCNI	CTCAG	3 cut(s)	658, 880, 1519
BspEI	TCCGGA	1 cut(s)	1579
BspFNI	CGCG	3 cut(s)	68, 427, 506
BspHI	TCATGA	1 cut(s)	2254
BspLI	GGNNCC	6 cut(s)	342, 663, 864, 915, 1184, 1578
BspMI	ACCTGC	1 cut(s)	1165
BspPI	GGATC	5 cut(s)	752, 1571, 1584, 1607, 2129
BspT107I	GGYRCC	2 cut(s)	913, 1182
BspTNI	GGTCTC	1 cut(s)	1497
BsrBI	CCGCTC	1 cut(s)	86
BsrDI	GCAATG	1 cut(s)	486
BsrFI	RCCGGY	2 cut(s)	986, 1286
BsrI	ACTGG	1 cut(s)	1818
BssAI	RCCGGY	2 cut(s)	986, 1286
BssECI	CCNNGG	9 cut(s)	369, 385, 543, 762, 1353, 1674, 1895, 2292, 2456
BssMI	GATC	5 cut(s)	757, 1576, 1612, 2134, 2349
BssNI	GRCGYC	1 cut(s)	2111
BssT1I	CCWWGG	4 cut(s)	762, 1674, 2292, 2456
Bst2UI	CCWGG	5 cut(s)	467, 572, 1453, 1896, 2037
Bst4CI	ACNGT	3 cut(s)	1303, 2023, 2409
Bst6I	CTCTTC	3 cut(s)	726, 1872, 2382
BstACI	GRCGYC	1 cut(s)	2111
BstAPI	GCANNNNNTGC	1 cut(s)	1166
BstC8I	GCNNGC	4 cut(s)	88, 420, 437, 2326
BstDEI	CTNAG	9 cut(s)	239, 630, 666, 867, 888, 937, 1386, 1527, 1554
BstDSI	CCRYGG	4 cut(s)	385, 1674, 2292, 2456
BstEII	GGTNACC	1 cut(s)	2463
BstENI	CCTNNNNNAGG	1 cut(s)	1972
BstF5I	GGATG	7 cut(s)	784, 904, 1363, 1549, 1575, 2158, 2180
BstFNI	CGCG	3 cut(s)	68, 427, 506
BstHHI	GCGC	2 cut(s)	429, 508
BstKTI	GATC	5 cut(s)	760, 1579, 1615, 2137, 2352
BstMAI	GTCTC	3 cut(s)	160, 1497, 1724
BstMBI	GATC	5 cut(s)	757, 1576, 1612, 2134, 2349
BstMCI	CGRYCG	2 cut(s)	293, 348
BstMWI	GCNNNNNNNGC	9 cut(s)	96, 298, 412, 424, 619, 1076, 1166, 1823, 1844
BstNI	CCWGG	5 cut(s)	467, 572, 1453, 1896, 2037
BstPI	GGTNACC	1 cut(s)	2463
BstSLI	GKGCMC	1 cut(s)	9
BstUI	CGCG	3 cut(s)	68, 427, 506
BstV1I	GCAGC	2 cut(s)	1153, 1804
BstV2I	GAAGAC	5 cut(s)	381, 456, 744, 1238, 1798
BstX2I	RGATCY	2 cut(s)	1576, 2134
BstYI	RGATCY	2 cut(s)	1576, 2134
BstZI	CGGCCG	2 cut(s)	290, 345
Bsu36I	CCTNAGG	1 cut(s)	666
BsuRI	GGCC	9 cut(s)	15, 182, 292, 319, 347, 384, 422, 745, 1928
BtgI	CCRYGG	4 cut(s)	385, 1674, 2292, 2456
BtgZI	GCGATG	3 cut(s)	109, 1286, 1473
BtrI	CACGTC	3 cut(s)	94, 496, 2098
BtsCI	GGATG	7 cut(s)	784, 904, 1363, 1549, 1575, 2158, 2180
BtsIMutI	CAGTG	1 cut(s)	775
BveI	ACCTGC	1 cut(s)	1165
Cac8I	GCNNGC	4 cut(s)	88, 420, 437, 2326
CaiI	CAGNNNCTG	1 cut(s)	158
CciI	TCATGA	1 cut(s)	2254
CfoI	GCGC	2 cut(s)	429, 508
Cfr10I	RCCGGY	2 cut(s)	986, 1286
Cfr13I	GGNCC	7 cut(s)	14, 317, 340, 382, 661, 743, 1284
CseI	GACGC	2 cut(s)	512, 1158
Csp6I	GTAC	5 cut(s)	914, 1183, 1299, 2276, 2410
CspAI	ACCGGT	1 cut(s)	1286
CviQI	GTAC	5 cut(s)	914, 1183, 1299, 2276, 2410
DdeI	CTNAG	9 cut(s)	239, 630, 666, 867, 888, 937, 1386, 1527, 1554
DpnI	GATC	5 cut(s)	759, 1578, 1614, 2136, 2351
DpnII	GATC	5 cut(s)	757, 1576, 1612, 2134, 2349
DraI	TTTAAA	1 cut(s)	874
DraIII	CACNNNGTG	1 cut(s)	391
EaeI	YGGCCR	2 cut(s)	290, 345
EagI	CGGCCG	2 cut(s)	290, 345
Eam1104I	CTCTTC	3 cut(s)	726, 1872, 2382
EarI	CTCTTC	3 cut(s)	726, 1872, 2382
EclXI	CGGCCG	2 cut(s)	290, 345
Eco130I	CCWWGG	4 cut(s)	762, 1674, 2292, 2456
Eco147I	AGGCCT	2 cut(s)	422, 1928
Eco31I	GGTCTC	1 cut(s)	1497
Eco32I	GATATC	2 cut(s)	1773, 1861
Eco47I	GGWCC	3 cut(s)	340, 661, 1284
Eco52I	CGGCCG	2 cut(s)	290, 345
Eco57I	CTGAAG	3 cut(s)	638, 686, 1428
Eco81I	CCTNAGG	1 cut(s)	666
Eco88I	CYCGRG	1 cut(s)	379
Eco91I	GGTNACC	1 cut(s)	2463
EcoNI	CCTNNNNNAGG	1 cut(s)	1972
EcoO65I	GGTNACC	1 cut(s)	2463
EcoRI	GAATTC	2 cut(s)	805, 957
EcoRII	CCWGG	5 cut(s)	465, 570, 1451, 1894, 2035
EcoRV	GATATC	2 cut(s)	1773, 1861
EcoT14I	CCWWGG	4 cut(s)	762, 1674, 2292, 2456
ErhI	CCWWGG	4 cut(s)	762, 1674, 2292, 2456
FaqI	GGGAC	1 cut(s)	560
FauI	CCCGC	2 cut(s)	88, 366
Fnu4HI	GCNGC	4 cut(s)	84, 416, 1167, 1818
FokI	GGATG	7 cut(s)	791, 911, 1370, 1556, 1582, 2165, 2187
Fsp4HI	GCNGC	4 cut(s)	84, 416, 1167, 1818
FspBI	CTAG	4 cut(s)	846, 852, 1080, 1974
GlaI	GCGC	2 cut(s)	428, 507
GluI	GCNGC	4 cut(s)	84, 416, 1167, 1818
GsuI	CTGGAG	1 cut(s)	2058
HaeIII	GGCC	9 cut(s)	15, 182, 292, 319, 347, 384, 422, 745, 1928
HgaI	GACGC	2 cut(s)	512, 1158
HhaI	GCGC	2 cut(s)	429, 508
Hin1I	GRCGYC	1 cut(s)	2111
Hin6I	GCGC	2 cut(s)	427, 506
HinP1I	GCGC	2 cut(s)	427, 506
HincII	GTYRAC	3 cut(s)	532, 652, 1468
HindII	GTYRAC	3 cut(s)	532, 652, 1468
HinfI	GANTC	5 cut(s)	377, 514, 968, 1337, 1985
HphI	GGTGA	9 cut(s)	244, 944, 1001, 1216, 1332, 1691, 2318, 2369, 2417
Hpy166II	GTNNAC	7 cut(s)	7, 532, 652, 1468, 1603, 1699, 1945
Hpy188I	TCNGA	6 cut(s)	618, 811, 1617, 1844, 2116, 2349
Hpy188III	TCNNGA	4 cut(s)	1511, 1580, 1961, 2255
Hpy8I	GTNNAC	7 cut(s)	7, 532, 652, 1468, 1603, 1699, 1945
Hpy99I	CGWCG	5 cut(s)	353, 356, 1028, 1174, 1192
HpyAV	CCTTC	7 cut(s)	127, 193, 484, 1636, 2261, 2297, 2348
HpyCH4III	ACNGT	3 cut(s)	1303, 2023, 2409
HpyCH4IV	ACGT	7 cut(s)	93, 495, 1695, 2097, 2111, 2278, 2412
HpyF10VI	GCNNNNNNNGC	9 cut(s)	96, 298, 412, 424, 619, 1076, 1166, 1823, 1844
HpyF3I	CTNAG	9 cut(s)	239, 630, 666, 867, 888, 937, 1386, 1527, 1554
HpySE526I	ACGT	7 cut(s)	93, 495, 1695, 2097, 2111, 2278, 2412
Hsp92I	GRCGYC	1 cut(s)	2111
HspAI	GCGC	2 cut(s)	427, 506
Kpn2I	TCCGGA	1 cut(s)	1579
KpnI	GGTACC	2 cut(s)	917, 1186
Kzo9I	GATC	5 cut(s)	757, 1576, 1612, 2134, 2349
LmnI	GCTCC	6 cut(s)	444, 697, 1014, 1398, 1844, 1996
Lsp1109I	GCAGC	2 cut(s)	1153, 1804
LweI	GCATC	5 cut(s)	1348, 1380, 1534, 1876, 1954
MaeI	CTAG	4 cut(s)	846, 852, 1080, 1974
MaeII	ACGT	7 cut(s)	93, 495, 1695, 2097, 2111, 2278, 2412
MaeIII	GTNAC	8 cut(s)	932, 1338, 1663, 2045, 2093, 2098, 2357, 2463
MalI	GATC	5 cut(s)	759, 1578, 1614, 2136, 2351
MbiI	CCGCTC	1 cut(s)	86
MboI	GATC	5 cut(s)	757, 1576, 1612, 2134, 2349
MflI	RGATCY	2 cut(s)	1576, 2134
MhlI	GDGCHC	2 cut(s)	9, 1849
MlyI	GAGTC	2 cut(s)	371, 1346
MmeI	TCCRAC	2 cut(s)	1314, 1822
MroI	TCCGGA	1 cut(s)	1579
MseI	TTAA	8 cut(s)	297, 458, 873, 981, 1053, 1496, 1910, 2195
MspA1I	CMGCKG	1 cut(s)	415
Mva1269I	GAATGC	2 cut(s)	1624, 1693
MvaI	CCWGG	5 cut(s)	467, 572, 1453, 1896, 2037
MvnI	CGCG	3 cut(s)	68, 427, 506
MwoI	GCNNNNNNNGC	9 cut(s)	96, 298, 412, 424, 619, 1076, 1166, 1823, 1844
NciI	CCSGG	7 cut(s)	289, 338, 344, 371, 544, 1355, 2384
NcoI	CCATGG	3 cut(s)	1674, 2292, 2456
NdeII	GATC	5 cut(s)	757, 1576, 1612, 2134, 2349
NlaIV	GGNNCC	6 cut(s)	342, 663, 864, 915, 1184, 1578
NmeAIII	GCCGAG	1 cut(s)	2420
NmuCI	GTSAC	7 cut(s)	932, 1338, 1663, 2045, 2093, 2098, 2357
PagI	TCATGA	1 cut(s)	2254
PceI	AGGCCT	2 cut(s)	422, 1928
PcsI	WCGNNNNNNNCGW	1 cut(s)	2208
PctI	GAATGC	2 cut(s)	1624, 1693
PfeI	GAWTC	3 cut(s)	514, 968, 1985
PfoI	TCCNGGA	1 cut(s)	2035
PinAI	ACCGGT	1 cut(s)	1286
PkrI	GCNGC	4 cut(s)	85, 417, 1168, 1819
PleI	GAGTC	2 cut(s)	371, 1345
PpsI	GAGTC	2 cut(s)	371, 1345
PshBI	ATTAAT	1 cut(s)	1910
Psp6I	CCWGG	5 cut(s)	465, 570, 1451, 1894, 2035
PspEI	GGTNACC	1 cut(s)	2463
PspGI	CCWGG	5 cut(s)	465, 570, 1451, 1894, 2035
PspN4I	GGNNCC	6 cut(s)	342, 663, 864, 915, 1184, 1578
PspPI	GGNCC	7 cut(s)	14, 317, 340, 382, 661, 743, 1284
PsrI	GAACNNNNNNTAC	2 cut(s)	2201, 2233
PstNI	CAGNNNCTG	1 cut(s)	158
PsuI	RGATCY	2 cut(s)	1576, 2134
RsaI	GTAC	5 cut(s)	915, 1184, 1300, 2277, 2411
RsaNI	GTAC	5 cut(s)	914, 1183, 1299, 2276, 2410
SaqAI	TTAA	8 cut(s)	297, 458, 873, 981, 1053, 1496, 1910, 2195
SatI	GCNGC	4 cut(s)	84, 416, 1167, 1818
Sau3AI	GATC	5 cut(s)	757, 1576, 1612, 2134, 2349
Sau96I	GGNCC	7 cut(s)	14, 317, 340, 382, 661, 743, 1284
SchI	GAGTC	2 cut(s)	371, 1346
SduI	GDGCHC	2 cut(s)	9, 1849
SfaNI	GCATC	5 cut(s)	1348, 1380, 1534, 1876, 1954
SinI	GGWCC	3 cut(s)	340, 661, 1284
SseBI	AGGCCT	2 cut(s)	422, 1928
SspMI	CTAG	4 cut(s)	846, 852, 1080, 1974
StuI	AGGCCT	2 cut(s)	422, 1928
StyI	CCWWGG	4 cut(s)	762, 1674, 2292, 2456
TaaI	ACNGT	3 cut(s)	1303, 2023, 2409
TaiI	ACGT	7 cut(s)	96, 498, 1698, 2100, 2114, 2281, 2415
TaqI	TCGA	5 cut(s)	567, 756, 971, 1190, 2352
TaqII	GACCGA	1 cut(s)	1037
TatI	WGTACW	1 cut(s)	1298
TauI	GCSGC	2 cut(s)	86, 418
TfiI	GAWTC	3 cut(s)	514, 968, 1985
Tru1I	TTAA	8 cut(s)	297, 458, 873, 981, 1053, 1496, 1910, 2195
Tru9I	TTAA	8 cut(s)	297, 458, 873, 981, 1053, 1496, 1910, 2195
TscAI	CASTG	1 cut(s)	775
TseFI	GTSAC	7 cut(s)	932, 1338, 1663, 2045, 2093, 2098, 2357
TseI	GCWGC	2 cut(s)	1166, 1817
Tsp45I	GTSAC	7 cut(s)	932, 1338, 1663, 2045, 2093, 2098, 2357
TspDTI	ATGAA	5 cut(s)	1281, 1476, 2145, 2243, 2352
TspGWI	ACGGA	2 cut(s)	402, 514
TspRI	CASTG	1 cut(s)	775
VneI	GTGCAC	1 cut(s)	5
VpaK11BI	GGWCC	3 cut(s)	340, 661, 1284
VspI	ATTAAT	1 cut(s)	1910
XagI	CCTNNNNNAGG	1 cut(s)	1972
XapI	RAATTY	7 cut(s)	752, 805, 812, 957, 1375, 1492, 2450
XcmI	CCANNNNNNNNNTGG	1 cut(s)	493
XspI	CTAG	4 cut(s)	846, 852, 1080, 1974
ZraI	GACGTC	1 cut(s)	2112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.