Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003587

Physical Location & Seq

Genomic Coordinates Forward (+)

19121634 .. 19123891

Gene Structure 2258 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g27880.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGTCGCTGTACCGCCTGCTCCTCCGCTCTCTCCGCCGCCCAACCGCCGCCCCTCAATCCCTAACCTCTCTCACCCTCCAAAACCCTATCTCCTCACATCCCCACCATCTCACCACCTCCCGCTCCTTCGCCTATTCCACCGCCGAAGAAGCCGCTGCCGAGCGCCGCCGCCGCAAGCGCCGTCTCCGCATCGAGCCCCCACTCCACGCTCTCCGTCGCGACTCCGGCCCGCCGCCTCCACGCGACCCCAACGCGCCCCGCCTCCCCGACTCCACCTCCGCCCTTGTCGGCCCTCGCCTCAACCTCCACAACCGCGTCCAGTCCCTCATACGCGCTGGCGACCTCGATGCCGCCTCCGCCGTGGCGCGTCACTCCGTCTTCTCCAACACGCGCCCCACCGTGTTCACCTGCAATGCCATCATCGCGGCCATGTACCGCGGCAAGAGGTACAATGACGCTATTGCCCTCTTCCACTTCTTCTTCAGCCAATCCAACATTGTTCCCAACATTGTCTCTTATAATAATTTGATTAACACTCATTGTGATGAGGGCCGTGTCGATGTGGGTCTTGAGATTTACCGGCACATCATTGCCACTGCTCCCTTTAGTCCCTCGCCCGTGACGTACCGTCATTTGACTAAAGGGTTGATTGATGCCGGTAGGATAGGTGATGCGGTTGACTTGTTGAGGGAGATGTTGAATAAGGGGCATGGTGCCGATTCTTTGGTTTTCAATAATTTGATTAAAGGGTTCTTGGATTTGGAGAATTTGGACAAGGCCAATGAGCTTTTCGACGAGCTCAAAGAGAGGTGTTTGGTGTATGATGGGGTTGTCAATGCCACTTTTATGGATTGGTTCTTCAATAAGGGGCAAGAGAAGGAGGCCATGGATTCGTATAGGTCCTTGCTTGATAGGCAGTTTAGGATGATCCCAGCTACCTGCAATGTTCTATTGGAAGTGCTGCTTAAGCATGACAAGAAGAAGGAGGCATGGGCTTTATTCGAACAAATGCTGGATAATCACACCCCGCCCAATTTCCAGGCTGTGAATTCCGAGACTTTTAACATAATGGTCAACGAATGTTTTAAACTTGGGAAGTTTGCTGAGGCATTCGACACCTTTAAGAAGGTGGGAACAAATGTGAAGTCAAAGCCTTTCTCCATGGATGTTGCGGGATATAATAATATCATTGCTAGGTATTGTGAGAATGGGATGTTATCGGAGGCTGATGCACTATTTACAGAATTGTCATCAAAGTCGCTGACCCCAGACGTAACAACTCACAGGACTCTGATTGATGCATATTTGAATGTGGAGAGGATAGATGATGCTCTTATGATATTTAACAGAATGGTGGATGTTGGTTTGCGAGTGGTTGCTACTTTTGGTAACAGGGTGTTTACTGAGTTGATCAAGAATGGGAAAGCAGTGGAATGTGCCAAAATTTTGAAGAAAATGGGAGAGAAAGATCCTAAACCAGATGCCAGTTGCTATGACATTGTGATCAGGGGGCTTTCCACCGAAGGTGAACTTGACTCAAGCCTTGATTTACTGGCCGAAATGTTGAGATATGGCATTGGCGTTCCTCCTGCACTGAAGCAATTTGTGTATGAGACTTTTGAAAAAGCCGGGCGTGGTGGACAGGTCGAGAGAACATTAACTGAGACTAGGTTCACACCAACTCCTAGAATGGCACAACCACGGCAATTTCCACCCATAAGATCACCTCAAATGTCAGGACCGCAGGAATCACCGCCAGGAACCTATATGGCAGGACATGGTCACCCATCATCAGCTCCCTCTCAAATGGCTGGACCATATCAGCCACCATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

612

Amino Acids

68.41

Weight (kDa)

8.82

Isoelectric Point (pI)

48.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	389 - 436	6e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003587)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10270 AT3G60980
fragaria_vesca	FvH4_5g27880
malus_domestica	MD08G1246600.v1.1 MD15G1441500.v1.1
prunus_persica	Prupe.1G583600_v2.0.a1 Prupe.1G583600_v2.0.a1 Prupe.1G583600_v2.0.a1
pyrus_communis	pycom08g21380 pycom11g13110 pycom11g13120 pycom15g38950 pycom17g02590
rosa_chinensis	RchiOBHm_Chr3g0472581 RchiOBHm_Chr7g0220071
rosa_laevigata	RLG00000002259 RLG00000024069
rosa_multiflora	Rmu_co8321059.1_g000001 Rmu_sc0003510.1_g000024 Rmu_sc0003510.1_g000025 Rmu_sc0005838.1_g000004 Rmu_sc0007553.1_g000004 Rmu_sc0011581.1_g000008
rosa_roxburghii	Rroxscaffold_3G00239800 Rroxscaffold_6G00408800
rosa_rugosa	Rorug07G0188700
rosa_samantha	Rh3AG178600 Rh3BG204500 Rh3CG194900 Rh3CG201900 Rh7AG332400 Rh7BG322300 Rh7CG349900 Rh7DG328000
rosa_wichuraiana	Rw7G027990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	519
AarI	CACCTGC	1 cut(s)	416
Acc36I	ACCTGC	2 cut(s)	416, 947
AccB1I	GGYRCC	1 cut(s)	713
AccBSI	CCGCTC	2 cut(s)	27, 123
AccII	CGCG	9 cut(s)	219, 243, 254, 315, 333, 367, 391, 425, 438
AclWI	GGATC	2 cut(s)	922, 1463
AcoI	YGGCCR	2 cut(s)	426, 1554
AcsI	RAATTY	3 cut(s)	766, 1048, 1443
AcuI	CTGAAG	2 cut(s)	466, 1616
AfaI	GTAC	4 cut(s)	11, 434, 449, 626
AflII	CTTAAG	1 cut(s)	965
AgsI	TTSAA	6 cut(s)	700, 733, 862, 1309, 1450, 1622
AhdI	GACNNNNNGTC	1 cut(s)	627
AjnI	CCWGG	2 cut(s)	1038, 1756
AjuI	GAANNNNNNNTTGG	2 cut(s)	773, 805
AluBI	AGCT	4 cut(s)	787, 799, 935, 1796
AluI	AGCT	4 cut(s)	787, 799, 935, 1796
Alw21I	GWGCWC	1 cut(s)	801
Alw26I	GTCTC	5 cut(s)	188, 517, 1049, 1607, 1658
AlwI	GGATC	2 cut(s)	922, 1463
AoxI	GGCC	7 cut(s)	226, 289, 426, 550, 777, 882, 1554
ApeKI	GCWGC	2 cut(s)	155, 961
ApoI	RAATTY	3 cut(s)	766, 1048, 1443
ArsI	GACNNNNNNTTYG	2 cut(s)	1130, 1162
AspLEI	GCGC	6 cut(s)	165, 180, 256, 335, 367, 393
AspS9I	GGNCC	6 cut(s)	227, 290, 550, 900, 1739, 1814
AsuC2I	CCSGG	1 cut(s)	1630
AsuHPI	GGTGA	8 cut(s)	64, 103, 397, 680, 1538, 1716, 1743, 1775
AsuII	TTCGAA	1 cut(s)	1002
AvaII	GGWCC	3 cut(s)	900, 1739, 1814
BanI	GGYRCC	1 cut(s)	713
BanII	GRGCYC	2 cut(s)	198, 801
BbsI	GAAGAC	1 cut(s)	370
Bbv12I	GWGCWC	1 cut(s)	801
BbvCI	CCTCAGC	1 cut(s)	1104
BbvI	GCAGC	2 cut(s)	142, 948
BccI	CCATC	4 cut(s)	114, 425, 818, 1795
BceAI	ACGGC	4 cut(s)	165, 344, 537, 1718
BcgI	CGANNNNNNTGC	2 cut(s)	329, 363
BciT130I	CCWGG	2 cut(s)	1040, 1758
BclI	TGATCA	2 cut(s)	1410, 1503
BcnI	CCSGG	1 cut(s)	1630
BcoDI	GTCTC	5 cut(s)	188, 517, 1049, 1607, 1658
BfaI	CTAG	3 cut(s)	1194, 1668, 1686
BfoI	RGCGCY	2 cut(s)	166, 181
BfrI	CTTAAG	1 cut(s)	965
BfuAI	ACCTGC	2 cut(s)	416, 947
Bme1390I	CCNGG	3 cut(s)	1040, 1630, 1758
Bme18I	GGWCC	3 cut(s)	900, 1739, 1814
BmeRI	GACNNNNNGTC	1 cut(s)	627
BmgT120I	GGNCC	6 cut(s)	227, 290, 550, 900, 1739, 1814
BmiI	GGNNCC	2 cut(s)	715, 1762
BmrFI	CCNGG	3 cut(s)	1040, 1630, 1758
BmsI	GCATC	8 cut(s)	198, 337, 643, 661, 1219, 1288, 1318, 1471
BpiI	GAAGAC	1 cut(s)	370
Bpu10I	CCTNAGC	1 cut(s)	1104
Bpu14I	TTCGAA	1 cut(s)	1002
BpuEI	CTTGAG	2 cut(s)	590, 1522
BpuMI	CCSGG	1 cut(s)	1630
BsaJI	CCNNGG	5 cut(s)	360, 436, 885, 1161, 1700
BsaXI	ACNNNNNCTCC	6 cut(s)	74, 104, 260, 290, 1666, 1696
Bse118I	RCCGGY	2 cut(s)	579, 656
Bse1I	ACTGG	3 cut(s)	319, 1485, 1557
Bse3DI	GCAATG	4 cut(s)	418, 588, 949, 1188
BseBI	CCWGG	2 cut(s)	1040, 1758
BseDI	CCNNGG	5 cut(s)	360, 436, 885, 1161, 1700
BseGI	GGATG	5 cut(s)	97, 930, 1171, 1218, 1363
BseMI	GCAATG	4 cut(s)	418, 588, 949, 1188
BseMII	CTCAG	3 cut(s)	1095, 1395, 1653
BseNI	ACTGG	3 cut(s)	319, 1485, 1557
BseRI	GAGGAG	2 cut(s)	11, 82
BseXI	GCAGC	2 cut(s)	142, 948
BseYI	CCCAGC	1 cut(s)	931
BsgI	GTGCAG	1 cut(s)	1575
Bsh1236I	CGCG	9 cut(s)	219, 243, 254, 315, 333, 367, 391, 425, 438
BshFI	GGCC	7 cut(s)	228, 291, 428, 552, 779, 884, 1556
BshNI	GGYRCC	1 cut(s)	713
BsiHKAI	GWGCWC	1 cut(s)	801
BsiSI	CCGG	4 cut(s)	225, 580, 657, 1629
BslFI	GGGAC	2 cut(s)	307, 594
BsmAI	GTCTC	5 cut(s)	188, 517, 1049, 1607, 1658
BsmBI	CGTCTC	1 cut(s)	188
BsmFI	GGGAC	2 cut(s)	307, 594
BsmI	GAATGC	1 cut(s)	1109
BsnI	GGCC	7 cut(s)	228, 291, 428, 552, 779, 884, 1556
Bsp119I	TTCGAA	1 cut(s)	1002
Bsp1286I	GDGCHC	2 cut(s)	198, 801
Bsp143I	GATC	5 cut(s)	927, 1410, 1468, 1503, 1721
Bsp19I	CCATGG	2 cut(s)	885, 1161
Bsp68I	TCGCGA	1 cut(s)	219
BspANI	GGCC	7 cut(s)	228, 291, 428, 552, 779, 884, 1556
BspCNI	CTCAG	3 cut(s)	1096, 1396, 1654
BspFNI	CGCG	9 cut(s)	219, 243, 254, 315, 333, 367, 391, 425, 438
BspLI	GGNNCC	2 cut(s)	715, 1762
BspMI	ACCTGC	2 cut(s)	416, 947
BspPI	GGATC	2 cut(s)	922, 1463
BspT104I	TTCGAA	1 cut(s)	1002
BspT107I	GGYRCC	1 cut(s)	713
BspTI	CTTAAG	1 cut(s)	965
BsrBI	CCGCTC	2 cut(s)	27, 123
BsrDI	GCAATG	4 cut(s)	418, 588, 949, 1188
BsrFI	RCCGGY	2 cut(s)	579, 656
BsrI	ACTGG	3 cut(s)	319, 1485, 1557
BssAI	RCCGGY	2 cut(s)	579, 656
BssECI	CCNNGG	5 cut(s)	360, 436, 885, 1161, 1700
BssMI	GATC	5 cut(s)	927, 1410, 1468, 1503, 1721
BssT1I	CCWWGG	2 cut(s)	885, 1161
Bst2UI	CCWGG	2 cut(s)	1040, 1758
Bst4CI	ACNGT	2 cut(s)	400, 629
Bst6I	CTCTTC	1 cut(s)	473
BstAFI	CTTAAG	1 cut(s)	965
BstBI	TTCGAA	1 cut(s)	1002
BstC8I	GCNNGC	4 cut(s)	17, 176, 230, 337
BstDEI	CTNAG	3 cut(s)	1104, 1404, 1662
BstDSI	CCRYGG	5 cut(s)	360, 436, 885, 1161, 1700
BstEII	GGTNACC	1 cut(s)	1781
BstF5I	GGATG	5 cut(s)	97, 930, 1171, 1218, 1363
BstFNI	CGCG	9 cut(s)	219, 243, 254, 315, 333, 367, 391, 425, 438
BstH2I	RGCGCY	2 cut(s)	166, 181
BstHHI	GCGC	6 cut(s)	165, 180, 256, 335, 367, 393
BstKTI	GATC	5 cut(s)	930, 1413, 1471, 1506, 1724
BstMAI	GTCTC	5 cut(s)	188, 517, 1049, 1607, 1658
BstMBI	GATC	5 cut(s)	927, 1410, 1468, 1503, 1721
BstNI	CCWGG	2 cut(s)	1040, 1758
BstPI	GGTNACC	1 cut(s)	1781
BstSCI	CCNGG	3 cut(s)	1038, 1628, 1756
BstUI	CGCG	9 cut(s)	219, 243, 254, 315, 333, 367, 391, 425, 438
BstV1I	GCAGC	2 cut(s)	142, 948
BstV2I	GAAGAC	1 cut(s)	370
BstX2I	RGATCY	1 cut(s)	1468
BstXI	CCANNNNNNTGG	1 cut(s)	847
BstYI	RGATCY	1 cut(s)	1468
BsuRI	GGCC	7 cut(s)	228, 291, 428, 552, 779, 884, 1556
BtgI	CCRYGG	5 cut(s)	360, 436, 885, 1161, 1700
BtgZI	GCGATG	1 cut(s)	406
BtsCI	GGATG	5 cut(s)	97, 930, 1171, 1218, 1363
BtsI	GCAGTG	2 cut(s)	594, 1434
BtsIMutI	CAGTG	3 cut(s)	594, 1434, 1592
BtuMI	TCGCGA	1 cut(s)	219
BveI	ACCTGC	2 cut(s)	416, 947
Cac8I	GCNNGC	4 cut(s)	17, 176, 230, 337
CfoI	GCGC	6 cut(s)	165, 180, 256, 335, 367, 393
Cfr10I	RCCGGY	2 cut(s)	579, 656
Cfr13I	GGNCC	6 cut(s)	227, 290, 550, 900, 1739, 1814
Cfr42I	CCGCGG	1 cut(s)	439
CseI	GACGC	3 cut(s)	304, 356, 464
Csp6I	GTAC	4 cut(s)	10, 433, 448, 625
CviAII	CATG	7 cut(s)	430, 710, 886, 971, 990, 1162, 1778
CviQI	GTAC	4 cut(s)	10, 433, 448, 625
DdeI	CTNAG	3 cut(s)	1104, 1404, 1662
DpnI	GATC	5 cut(s)	929, 1412, 1470, 1505, 1723
DpnII	GATC	5 cut(s)	927, 1410, 1468, 1503, 1721
DraI	TTTAAA	1 cut(s)	1087
DriI	GACNNNNNGTC	1 cut(s)	627
EaeI	YGGCCR	2 cut(s)	426, 1554
Eam1104I	CTCTTC	1 cut(s)	473
Eam1105I	GACNNNNNGTC	1 cut(s)	627
EarI	CTCTTC	1 cut(s)	473
EciI	GGCGGA	3 cut(s)	23, 268, 346
Ecl136II	GAGCTC	1 cut(s)	799
Eco130I	CCWWGG	2 cut(s)	885, 1161
Eco24I	GRGCYC	2 cut(s)	198, 801
Eco47I	GGWCC	3 cut(s)	900, 1739, 1814
Eco53kI	GAGCTC	1 cut(s)	799
Eco57I	CTGAAG	2 cut(s)	466, 1616
Eco91I	GGTNACC	1 cut(s)	1781
EcoICRI	GAGCTC	1 cut(s)	799
EcoO109I	RGGNCCY	1 cut(s)	900
EcoO65I	GGTNACC	1 cut(s)	1781
EcoRI	GAATTC	1 cut(s)	1048
EcoRII	CCWGG	2 cut(s)	1038, 1756
EcoT14I	CCWWGG	2 cut(s)	885, 1161
EcoT22I	ATGCAT	1 cut(s)	1303
EcoT38I	GRGCYC	2 cut(s)	198, 801
ErhI	CCWWGG	2 cut(s)	885, 1161
Esp3I	CGTCTC	1 cut(s)	188
FaeI	CATG	7 cut(s)	433, 713, 889, 974, 993, 1165, 1781
FalI	AAGNNNNNCTT	4 cut(s)	948, 980, 1515, 1547
FaqI	GGGAC	2 cut(s)	307, 594
FatI	CATG	7 cut(s)	429, 709, 885, 970, 989, 1161, 1777
FauI	CCCGC	5 cut(s)	128, 237, 266, 1035, 1165
FbaI	TGATCA	2 cut(s)	1410, 1503
FokI	GGATG	5 cut(s)	84, 937, 1178, 1225, 1370
FriOI	GRGCYC	2 cut(s)	198, 801
FspBI	CTAG	3 cut(s)	1194, 1668, 1686
GlaI	GCGC	6 cut(s)	164, 179, 255, 334, 366, 392
GsaI	CCCAGC	1 cut(s)	935
HaeII	RGCGCY	2 cut(s)	166, 181
HaeIII	GGCC	7 cut(s)	228, 291, 428, 552, 779, 884, 1556
HapII	CCGG	4 cut(s)	225, 580, 657, 1629
HgaI	GACGC	3 cut(s)	304, 356, 464
HhaI	GCGC	6 cut(s)	165, 180, 256, 335, 367, 393
Hin1II	CATG	7 cut(s)	433, 713, 889, 974, 993, 1165, 1781
Hin6I	GCGC	6 cut(s)	163, 178, 254, 333, 365, 391
HinP1I	GCGC	6 cut(s)	163, 178, 254, 333, 365, 391
HincII	GTYRAC	2 cut(s)	679, 1075
HindII	GTYRAC	2 cut(s)	679, 1075
HinfI	GANTC	7 cut(s)	221, 269, 719, 890, 1288, 1535, 1748
HpaII	CCGG	4 cut(s)	225, 580, 657, 1629
HphI	GGTGA	8 cut(s)	64, 103, 397, 680, 1538, 1716, 1743, 1775
Hpy166II	GTNNAC	7 cut(s)	405, 679, 1075, 1401, 1529, 1640, 1674
Hpy188I	TCNGA	3 cut(s)	1054, 1222, 1293
Hpy188III	TCNNGA	6 cut(s)	218, 569, 1414, 1648, 1737, 1833
Hpy8I	GTNNAC	7 cut(s)	405, 679, 1075, 1401, 1529, 1640, 1674
Hpy99I	CGWCG	2 cut(s)	219, 797
HpyAV	CCTTC	5 cut(s)	136, 871, 976, 1120, 1517
HpyCH4III	ACNGT	2 cut(s)	400, 629
HpyCH4IV	ACGT	2 cut(s)	623, 1272
HpyCH4V	TGCA	5 cut(s)	411, 942, 1232, 1301, 1592
HpyF3I	CTNAG	3 cut(s)	1104, 1404, 1662
HpySE526I	ACGT	2 cut(s)	623, 1272
Hsp92II	CATG	7 cut(s)	433, 713, 889, 974, 993, 1165, 1781
HspAI	GCGC	6 cut(s)	163, 178, 254, 333, 365, 391
Ksp22I	TGATCA	2 cut(s)	1410, 1503
KspI	CCGCGG	1 cut(s)	439
Kzo9I	GATC	5 cut(s)	927, 1410, 1468, 1503, 1721
LmnI	GCTCC	4 cut(s)	24, 128, 604, 1801
Lsp1109I	GCAGC	2 cut(s)	142, 948
LweI	GCATC	8 cut(s)	198, 337, 643, 661, 1219, 1288, 1318, 1471
MaeI	CTAG	3 cut(s)	1194, 1668, 1686
MaeII	ACGT	2 cut(s)	623, 1272
MaeIII	GTNAC	5 cut(s)	368, 619, 1273, 1388, 1781
MalI	GATC	5 cut(s)	929, 1412, 1470, 1505, 1723
MbiI	CCGCTC	2 cut(s)	27, 123
MboI	GATC	5 cut(s)	927, 1410, 1468, 1503, 1721
MboII	GAAGA	8 cut(s)	158, 370, 460, 469, 472, 850, 991, 1462
MflI	RGATCY	1 cut(s)	1468
MhlI	GDGCHC	2 cut(s)	198, 801
MluCI	AATT	9 cut(s)	523, 736, 766, 1033, 1048, 1244, 1443, 1601, 1706
MlyI	GAGTC	4 cut(s)	215, 263, 1282, 1529
MmeI	TCCRAC	2 cut(s)	408, 516
Mph1103I	ATGCAT	1 cut(s)	1303
MseI	TTAA	8 cut(s)	531, 744, 966, 1062, 1086, 1122, 1344, 1658
MslI	CAYNNNNRTG	2 cut(s)	543, 845
MspA1I	CMGCKG	2 cut(s)	155, 438
MspCI	CTTAAG	1 cut(s)	965
MspI	CCGG	4 cut(s)	225, 580, 657, 1629
MspR9I	CCNGG	3 cut(s)	1040, 1630, 1758
Mva1269I	GAATGC	1 cut(s)	1109
MvaI	CCWGG	2 cut(s)	1040, 1758
MvnI	CGCG	9 cut(s)	219, 243, 254, 315, 333, 367, 391, 425, 438
NciI	CCSGG	1 cut(s)	1630
NcoI	CCATGG	2 cut(s)	885, 1161
NdeII	GATC	5 cut(s)	927, 1410, 1468, 1503, 1721
NlaIII	CATG	7 cut(s)	433, 713, 889, 974, 993, 1165, 1781
NlaIV	GGNNCC	2 cut(s)	715, 1762
NmeAIII	GCCGAG	1 cut(s)	184
NmuCI	GTSAC	3 cut(s)	368, 619, 1781
NruI	TCGCGA	1 cut(s)	219
NsiI	ATGCAT	1 cut(s)	1303
NspV	TTCGAA	1 cut(s)	1002
PaqCI	CACCTGC	1 cut(s)	416
PcsI	WCGNNNNNNNCGW	1 cut(s)	620
PctI	GAATGC	1 cut(s)	1109
PfeI	GAWTC	3 cut(s)	719, 890, 1748
PflFI	GACNNNGTC	1 cut(s)	1779
PleI	GAGTC	4 cut(s)	215, 263, 1282, 1529
PpsI	GAGTC	4 cut(s)	215, 263, 1282, 1529
PpuMI	RGGWCCY	1 cut(s)	900
PsiI	TTATAA	1 cut(s)	519
Psp124BI	GAGCTC	1 cut(s)	801
Psp5II	RGGWCCY	1 cut(s)	900
Psp6I	CCWGG	2 cut(s)	1038, 1756
PspEI	GGTNACC	1 cut(s)	1781
PspFI	CCCAGC	1 cut(s)	931
PspGI	CCWGG	2 cut(s)	1038, 1756
PspN4I	GGNNCC	2 cut(s)	715, 1762
PspPI	GGNCC	6 cut(s)	227, 290, 550, 900, 1739, 1814
PspPPI	RGGWCCY	1 cut(s)	900
PsuI	RGATCY	1 cut(s)	1468
PsyI	GACNNNGTC	1 cut(s)	1779
RruI	TCGCGA	1 cut(s)	219
RsaI	GTAC	4 cut(s)	11, 434, 449, 626
RsaNI	GTAC	4 cut(s)	10, 433, 448, 625
RseI	CAYNNNNRTG	2 cut(s)	543, 845
SacI	GAGCTC	1 cut(s)	801
SacII	CCGCGG	1 cut(s)	439
SaqAI	TTAA	8 cut(s)	531, 744, 966, 1062, 1086, 1122, 1344, 1658
Sau3AI	GATC	5 cut(s)	927, 1410, 1468, 1503, 1721
Sau96I	GGNCC	6 cut(s)	227, 290, 550, 900, 1739, 1814
SchI	GAGTC	4 cut(s)	215, 263, 1282, 1529
ScrFI	CCNGG	3 cut(s)	1040, 1630, 1758
SduI	GDGCHC	2 cut(s)	198, 801
SfaNI	GCATC	8 cut(s)	198, 337, 643, 661, 1219, 1288, 1318, 1471
Sfr303I	CCGCGG	1 cut(s)	439
SfuI	TTCGAA	1 cut(s)	1002
SgrBI	CCGCGG	1 cut(s)	439
SinI	GGWCC	3 cut(s)	900, 1739, 1814
SmiMI	CAYNNNNRTG	2 cut(s)	543, 845
SmlI	CTYRAG	3 cut(s)	569, 965, 1537
SmoI	CTYRAG	3 cut(s)	569, 965, 1537
Sse9I	AATT	9 cut(s)	523, 736, 766, 1033, 1048, 1244, 1443, 1601, 1706
SspMI	CTAG	3 cut(s)	1194, 1668, 1686
SstI	GAGCTC	1 cut(s)	801
StyD4I	CCNGG	3 cut(s)	1038, 1628, 1756
StyI	CCWWGG	2 cut(s)	885, 1161
TaaI	ACNGT	2 cut(s)	400, 629
TaiI	ACGT	2 cut(s)	626, 1275
TaqI	TCGA	7 cut(s)	192, 345, 558, 792, 1002, 1113, 1647
TasI	AATT	9 cut(s)	523, 736, 766, 1033, 1048, 1244, 1443, 1601, 1706
TfiI	GAWTC	3 cut(s)	719, 890, 1748
Tru1I	TTAA	8 cut(s)	531, 744, 966, 1062, 1086, 1122, 1344, 1658
Tru9I	TTAA	8 cut(s)	531, 744, 966, 1062, 1086, 1122, 1344, 1658
TscAI	CASTG	3 cut(s)	601, 1434, 1599
TseFI	GTSAC	3 cut(s)	368, 619, 1781
TseI	GCWGC	2 cut(s)	155, 961
Tsp45I	GTSAC	3 cut(s)	368, 619, 1781
TspGWI	ACGGA	2 cut(s)	203, 364
TspRI	CASTG	3 cut(s)	601, 1434, 1599
Tth111I	GACNNNGTC	1 cut(s)	1779
Vha464I	CTTAAG	1 cut(s)	965
VpaK11BI	GGWCC	3 cut(s)	900, 1739, 1814
XapI	RAATTY	3 cut(s)	766, 1048, 1443
XspI	CTAG	3 cut(s)	1194, 1668, 1686
Zsp2I	ATGCAT	1 cut(s)	1303

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.