Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10270 AT3G60980 |
| fragaria_vesca | FvH4_5g27880 |
| malus_domestica | MD08G1246600.v1.1 MD15G1441500.v1.1 |
| prunus_persica | Prupe.1G583600_v2.0.a1 Prupe.1G583600_v2.0.a1 Prupe.1G583600_v2.0.a1 |
| pyrus_communis | pycom08g21380 pycom11g13110 pycom11g13120 pycom15g38950 pycom17g02590 |
| rosa_chinensis | RchiOBHm_Chr3g0472581 RchiOBHm_Chr7g0220071 |
| rosa_laevigata | RLG00000002259 RLG00000024069 |
| rosa_multiflora | Rmu_co8321059.1_g000001 Rmu_sc0003510.1_g000024 Rmu_sc0003510.1_g000025 Rmu_sc0005838.1_g000004 Rmu_sc0007553.1_g000004 Rmu_sc0011581.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00239800 Rroxscaffold_6G00408800 |
| rosa_rugosa | Rorug07G0188700 |
| rosa_samantha | Rh3AG178600 Rh3BG204500 Rh3CG194900 Rh3CG201900 Rh7AG332400 Rh7BG322300 Rh7CG349900 Rh7DG328000 |
| rosa_wichuraiana | Rw7G027990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 82, 91 |
| AcyI | GRCGYC | 1 cut(s) | 33 |
| AgsI | TTSAA | 4 cut(s) | 9, 61, 82, 166 |
| AluBI | AGCT | 1 cut(s) | 112 |
| AluI | AGCT | 1 cut(s) | 112 |
| AoxI | GGCC | 1 cut(s) | 102 |
| ApoI | RAATTY | 2 cut(s) | 82, 91 |
| BaeGI | GKGCMC | 1 cut(s) | 72 |
| BbsI | GAAGAC | 1 cut(s) | 21 |
| BccI | CCATC | 1 cut(s) | 122 |
| BceAI | ACGGC | 1 cut(s) | 20 |
| BpiI | GAAGAC | 1 cut(s) | 21 |
| BsaHI | GRCGYC | 1 cut(s) | 33 |
| BsaJI | CCNNGG | 1 cut(s) | 36 |
| Bse3DI | GCAATG | 1 cut(s) | 195 |
| BseDI | CCNNGG | 1 cut(s) | 36 |
| BseMI | GCAATG | 1 cut(s) | 195 |
| BseSI | GKGCMC | 1 cut(s) | 72 |
| BshFI | GGCC | 1 cut(s) | 104 |
| BsnI | GGCC | 1 cut(s) | 104 |
| Bsp1286I | GDGCHC | 1 cut(s) | 72 |
| BspANI | GGCC | 1 cut(s) | 104 |
| BsrDI | GCAATG | 1 cut(s) | 195 |
| BssECI | CCNNGG | 1 cut(s) | 36 |
| BssNI | GRCGYC | 1 cut(s) | 33 |
| BstACI | GRCGYC | 1 cut(s) | 33 |
| BstDSI | CCRYGG | 1 cut(s) | 36 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 216 |
| BstSLI | GKGCMC | 1 cut(s) | 72 |
| BstV2I | GAAGAC | 1 cut(s) | 21 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 151 |
| BsuRI | GGCC | 1 cut(s) | 104 |
| BtgI | CCRYGG | 1 cut(s) | 36 |
| CseI | GACGC | 1 cut(s) | 41 |
| CviJI | RGCY | 2 cut(s) | 104, 112 |
| CviKI_1 | RGCY | 2 cut(s) | 104, 112 |
| FaiI | YATR | 3 cut(s) | 126, 152, 199 |
| HaeIII | GGCC | 1 cut(s) | 104 |
| HgaI | GACGC | 1 cut(s) | 41 |
| Hin1I | GRCGYC | 1 cut(s) | 33 |
| HinfI | GANTC | 1 cut(s) | 194 |
| Hpy166II | GTNNAC | 1 cut(s) | 40 |
| Hpy188III | TCNNGA | 1 cut(s) | 79 |
| Hpy8I | GTNNAC | 1 cut(s) | 40 |
| HpyAV | CCTTC | 1 cut(s) | 175 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 216 |
| Hsp92I | GRCGYC | 1 cut(s) | 33 |
| LpnPI | CCDG | 1 cut(s) | 187 |
| MboII | GAAGA | 2 cut(s) | 26, 154 |
| MhlI | GDGCHC | 1 cut(s) | 72 |
| MluCI | AATT | 2 cut(s) | 82, 91 |
| MnlI | CCTC | 2 cut(s) | 112, 178 |
| MslI | CAYNNNNRTG | 1 cut(s) | 149 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 216 |
| PfeI | GAWTC | 1 cut(s) | 194 |
| RseI | CAYNNNNRTG | 1 cut(s) | 149 |
| SduI | GDGCHC | 1 cut(s) | 72 |
| SetI | ASST | 4 cut(s) | 114, 123, 149, 206 |
| SgeI | CNNG | 9 cut(s) | 21, 49, 55, 83, 85, 91, 112, 214, 219 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 149 |
| Sse9I | AATT | 2 cut(s) | 82, 91 |
| TasI | AATT | 2 cut(s) | 82, 91 |
| TfiI | GAWTC | 1 cut(s) | 194 |
| TspDTI | ATGAA | 1 cut(s) | 186 |
| XapI | RAATTY | 2 cut(s) | 82, 91 |