Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003587

Physical Location & Seq

Genomic Coordinates Forward (+)

54123832 .. 54127631

Gene Structure 3800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1441500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGTCATTCTACCGCCTGCTCCACCGCTCTCTCCGCCGCCCTTCCACCCCAACAACCCTACCCCTAACCCAATCCCTCTCCTCCCTCCACCTCCACAACCCTAACCATCACATTCCTCTCCATCTCACTACCCCCACGCGCACCTTCGCCTTCTCCTCCGCCGAAGAAGCCGCCGCTGAGCGCCGACGCCGCAAGCGCCGCCTCCGCATCGAGCCCCCGCTCAACGCCCTCCGTCGGGACTCACGCCCCCCTCCCCCACGGGACCCGAACGCCCCCCGCCTACCTGACACCACCTCCGCCCTCGTCGGTCCCCGCCTCAACCTCCACAACCGCGTCCAGTCGCTCATCCGCGCCGGAGACTTGGACGCGGCCTCCGAGGTTGCGCGCCGCTCGGTTTTCTCCAACACTCGCCCCACCGTCTTCACCTGCAATGCCATTGTGGCTGCAATGTACCGCGCCAAGAGGTATAATGACGCTATTGCCCTCTTCCACTTCTTCTTCAATCAATCAAACATTGTTCCTAACATTGTATCTTATAATAATTTGATTAATACTCACTGCGACGAGGGCCGTGTCGATGTGGGCCTGGAGATTTATCGGCATATAATTGCAAATTGCCCCTACAGTCCCTCGCCCGTGACATACCGGCATTTGACTAAAGGGTTGGTCGATGCTGGGAGGATAGGTGAGGGTGTGGACTTGTTGAGGGAGATGTTGAATAAGGGCCACGGAGCGGATTCTTTGGTTTATAATAATTTGATTAAGGGGTTCTTACATTTGGAGAATATGGAGAAGGCTGTTGAGCTTTTTGATGAGCTTAAAGAGAGATGCTTGGTTTATGATGGGGTCGTGAATTCAACGTTTATGGATTGGTTTTTCAACCAGGGGAAAGAGAAGGAGGCGATGGAGTCATACAAGTCCTTGCTTGATAGGCAGTTTAGGATGGTCCCGGCAACTTGTAATGTTCTCTTGGAGGTATTGCTTAAGCATGGGAAGAAGAAGGAAGCCTGGGATTTGTTCGATCAAATGTTGGATAATCACACCCCGCCAAACTCCCAGGCTGTGAATTCGGATACATTTAACATTATGGTTAATGAGTGTTTTAAGCTTGGAAAGTGCGATGAGGCAATTGCCACCTTTAAGAAGGTGGGGACAAAGGTGAATTCAAAGCCATTTTCTATGGACGTTGCGGGGTATAACAATATCATTGCTAGATATTGTGAGAATGGGATGTTGCCGGAGGCTGAGACATTGTTTGCAGAATTGTCCTCAAAGTCATTGACCCCGGATGTCACGACTCATAGGACGCTGATTGATGCATATTTGAAGGTAGAGAGGATAGATGATGCTCTTAAGATATTTAGCAGGATGGTGGAGGTTGGTCTGCGAGTGGTTGCTAGTCTTGGTAGTAGGGTGTTCGATGAATTGATTAAGAACGGGAAGGTAGTAGACTGTGCGCAGATTTTGAAGAAAATGGGAGAAAAAGATCCAAAACCAGATGCCAGTTTTTATGAAGCTGTGATCAAGGGGCTTTGCAACGAAGGTGCGCTTGATACAGGCCGTGATTTAGTGGAAGAGATGGTGAGGTATGGCATTGGTGTTCCTCCAGCATTACAGCAGTTTGTAAATGAGGTTTTTGGAGAAGCTGGGCGTGGTGAAGAGATTCAGAGAGTATTAAATACAAATATGCGGGGATACCAACCACTACCTAGAGAGGCACCACCTCGGCAATTCCAACCAAGATCGCCTCAAATGGCAGGACAGGAGCCTCCGTCAGGACCTTCTCAAATGGCAGGACAATATCGTCCGTCTTCGGCACCGCCCCAAATGACTAGACAATATCAACCGCCATCTGGACCCTATCAGCCACCATCTGGAACGTATCAGCCGCCTTCTGGACCCTATCAAAAGACTGGAACTTACCAATCACCACCAACACCTCTACAGATGGCTACAAGCCAGCACCCCACAGCTCAATCCCCTCAAATGGCTGGACAGTATTGCTCTTCATCAGGAGCCTCCCAAACGGCAGTACCACGCCACCCTCCGTCCAGACTCCCTCATGTGGAAGCTTCGAACCCGCCATCTGAAGCTTTTCAGAGCTTAGTACCACCTGCTCAAGGGACAGGATCTCACCAATCACCATCAGAACCCCCTCAAAATACAGAACAGTCTAATGTTGGAACACAATATCTAGCTTGGATTACAGGTAAAACAGGATTAGGGGTTCCTGCCAAGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

748

Amino Acids

83.05

Weight (kDa)

8.9

Isoelectric Point (pI)

51.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	319 - 354	2e-07	PPR repeat family
PPR_2	PF13041	395 - 442	1.8e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003587)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10270 AT3G60980
fragaria_vesca	FvH4_5g27880
malus_domestica	MD08G1246600.v1.1 MD15G1441500.v1.1
prunus_persica	Prupe.1G583600_v2.0.a1 Prupe.1G583600_v2.0.a1 Prupe.1G583600_v2.0.a1
pyrus_communis	pycom08g21380 pycom11g13110 pycom11g13120 pycom15g38950 pycom17g02590
rosa_chinensis	RchiOBHm_Chr3g0472581 RchiOBHm_Chr7g0220071
rosa_laevigata	RLG00000002259 RLG00000024069
rosa_multiflora	Rmu_co8321059.1_g000001 Rmu_sc0003510.1_g000024 Rmu_sc0003510.1_g000025 Rmu_sc0005838.1_g000004 Rmu_sc0007553.1_g000004 Rmu_sc0011581.1_g000008
rosa_roxburghii	Rroxscaffold_3G00239800 Rroxscaffold_6G00408800
rosa_rugosa	Rorug07G0188700
rosa_samantha	Rh3AG178600 Rh3BG204500 Rh3CG194900 Rh3CG201900 Rh7AG332400 Rh7BG322300 Rh7CG349900 Rh7DG328000
rosa_wichuraiana	Rw7G027990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	537, 750
AarI	CACCTGC	2 cut(s)	434, 2122
AasI	GACNNNNNNGTC	1 cut(s)	1803
Acc16I	TGCGCA	1 cut(s)	1458
Acc36I	ACCTGC	2 cut(s)	434, 2122
AccB1I	GGYRCC	2 cut(s)	1717, 1816
AccB7I	CCANNNNNTGG	1 cut(s)	1874
AccBSI	CCGCTC	4 cut(s)	27, 220, 390, 734
AccI	GTMKAC	1 cut(s)	1449
AccII	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
AclI	AACGTT	1 cut(s)	860
AclWI	GGATC	2 cut(s)	1481, 2137
AcsI	RAATTY	3 cut(s)	853, 1066, 1162
AcuI	CTGAAG	1 cut(s)	2109
AcyI	GRCGYC	1 cut(s)	187
AfaI	GTAC	3 cut(s)	452, 2034, 2109
AflII	CTTAAG	2 cut(s)	983, 1352
AgsI	TTSAA	7 cut(s)	502, 718, 858, 880, 1167, 1327, 1468
AjnI	CCWGG	4 cut(s)	585, 882, 1007, 1056
AloI	GAACNNNNNNTCC	2 cut(s)	2211, 2243
Alw26I	GTCTC	2 cut(s)	351, 1241
AlwI	GGATC	2 cut(s)	1481, 2137
AoxI	GGCC	5 cut(s)	369, 568, 583, 724, 1558
ApeKI	GCWGC	1 cut(s)	443
ApoI	RAATTY	3 cut(s)	853, 1066, 1162
AseI	ATTAAT	1 cut(s)	549
Asp700I	GAANNNNTTC	2 cut(s)	1662, 2094
AspLEI	GCGC	9 cut(s)	141, 183, 198, 353, 385, 387, 458, 1459, 1549
AspS9I	GGNCC	9 cut(s)	262, 308, 568, 583, 724, 946, 1778, 1856, 1898
AsuC2I	CCSGG	2 cut(s)	950, 1286
AsuHPI	GGTGA	8 cut(s)	415, 698, 1171, 1594, 1667, 1920, 2126, 2133
AsuII	TTCGAA	1 cut(s)	2075
AvaII	GGWCC	6 cut(s)	262, 308, 946, 1778, 1856, 1898
BaeI	ACNNNNGTAYC	2 cut(s)	2016, 2049
BanI	GGYRCC	2 cut(s)	1717, 1816
BanII	GRGCYC	1 cut(s)	216
BbsI	GAAGAC	2 cut(s)	412, 1803
BbvI	GCAGC	1 cut(s)	430
BceAI	ACGGC	3 cut(s)	555, 1545, 2043
BciT130I	CCWGG	4 cut(s)	587, 884, 1009, 1058
BciVI	GTATCC	2 cut(s)	1066, 1688
BclI	TGATCA	1 cut(s)	1521
BcnI	CCSGG	2 cut(s)	950, 1286
BcoDI	GTCTC	2 cut(s)	351, 1241
BfaI	CTAG	5 cut(s)	1212, 1398, 1710, 1833, 2195
BfmI	CTRYAG	2 cut(s)	622, 1943
BfoI	RGCGCY	2 cut(s)	184, 199
BfrI	CTTAAG	2 cut(s)	983, 1352
BfuAI	ACCTGC	2 cut(s)	434, 2122
BfuI	GTATCC	2 cut(s)	1066, 1688
BglI	GCCNNNNNGGC	1 cut(s)	440
BisI	GCNGC	9 cut(s)	37, 171, 174, 190, 199, 369, 388, 444, 1889
BlpI	GCTNAGC	1 cut(s)	177
BlsI	GCNGC	9 cut(s)	38, 172, 175, 191, 200, 370, 389, 445, 1890
Bme1390I	CCNGG	6 cut(s)	587, 884, 950, 1009, 1058, 1286
Bme18I	GGWCC	6 cut(s)	262, 308, 946, 1778, 1856, 1898
BmgT120I	GGNCC	9 cut(s)	262, 308, 568, 583, 724, 946, 1778, 1856, 1898
BmrFI	CCNGG	6 cut(s)	587, 884, 950, 1009, 1058, 1286
BmsI	GCATC	6 cut(s)	216, 661, 818, 1306, 1336, 1489
BpiI	GAAGAC	2 cut(s)	412, 1803
BpmI	CTGGAG	2 cut(s)	608, 1590
Bpu1102I	GCTNAGC	1 cut(s)	177
Bpu14I	TTCGAA	1 cut(s)	2075
BpuEI	CTTGAG	1 cut(s)	2103
BpuMI	CCSGG	2 cut(s)	950, 1286
BsaHI	GRCGYC	1 cut(s)	187
BsaJI	CCNNGG	8 cut(s)	257, 375, 727, 883, 1008, 1056, 1284, 1724
BsaXI	ACNNNNNCTCC	8 cut(s)	278, 308, 356, 386, 670, 700, 1757, 1787
Bse118I	RCCGGY	1 cut(s)	645
Bse1I	ACTGG	3 cut(s)	337, 1503, 1918
Bse3DI	GCAATG	3 cut(s)	436, 453, 1206
BseBI	CCWGG	4 cut(s)	587, 884, 1009, 1058
BseDI	CCNNGG	8 cut(s)	257, 375, 727, 883, 1008, 1056, 1284, 1724
BseGI	GGATG	5 cut(s)	345, 948, 1236, 1294, 1374
BseMI	GCAATG	3 cut(s)	436, 453, 1206
BseMII	CTCAG	2 cut(s)	168, 1236
BseNI	ACTGG	3 cut(s)	337, 1503, 1918
BsePI	GCGCGC	1 cut(s)	383
BseRI	GAGGAG	2 cut(s)	70, 145
BseXI	GCAGC	1 cut(s)	430
BseYI	CCCAGC	2 cut(s)	674, 1646
Bsh1236I	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
BshFI	GGCC	5 cut(s)	371, 570, 585, 726, 1560
BshNI	GGYRCC	2 cut(s)	1717, 1816
BsiSI	CCGG	5 cut(s)	354, 646, 950, 1238, 1286
BslFI	GGGAC	7 cut(s)	251, 275, 294, 612, 932, 1165, 2137
BsmAI	GTCTC	2 cut(s)	351, 1241
BsmFI	GGGAC	7 cut(s)	251, 275, 294, 612, 932, 1165, 2137
BsnI	GGCC	5 cut(s)	371, 570, 585, 726, 1560
Bsp119I	TTCGAA	1 cut(s)	2075
Bsp1286I	GDGCHC	1 cut(s)	216
Bsp143I	GATC	5 cut(s)	1021, 1486, 1521, 1742, 2129
Bsp1720I	GCTNAGC	1 cut(s)	177
BspANI	GGCC	5 cut(s)	371, 570, 585, 726, 1560
BspCNI	CTCAG	2 cut(s)	169, 1237
BspFNI	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
BspMI	ACCTGC	2 cut(s)	434, 2122
BspPI	GGATC	2 cut(s)	1481, 2137
BspQI	GCTCTTC	1 cut(s)	2011
BspT104I	TTCGAA	1 cut(s)	2075
BspT107I	GGYRCC	2 cut(s)	1717, 1816
BspTI	CTTAAG	2 cut(s)	983, 1352
BsrBI	CCGCTC	4 cut(s)	27, 220, 390, 734
BsrDI	GCAATG	3 cut(s)	436, 453, 1206
BsrFI	RCCGGY	1 cut(s)	645
BsrI	ACTGG	3 cut(s)	337, 1503, 1918
BssAI	RCCGGY	1 cut(s)	645
BssECI	CCNNGG	8 cut(s)	257, 375, 727, 883, 1008, 1056, 1284, 1724
BssHII	GCGCGC	1 cut(s)	383
BssMI	GATC	5 cut(s)	1021, 1486, 1521, 1742, 2129
BssNI	GRCGYC	1 cut(s)	187
Bst2UI	CCWGG	4 cut(s)	587, 884, 1009, 1058
Bst4CI	ACNGT	5 cut(s)	418, 626, 1454, 1998, 2172
Bst6I	CTCTTC	4 cut(s)	491, 1569, 1653, 2011
BstACI	GRCGYC	1 cut(s)	187
BstAFI	CTTAAG	2 cut(s)	983, 1352
BstBI	TTCGAA	1 cut(s)	2075
BstC8I	GCNNGC	4 cut(s)	17, 194, 385, 1961
BstDEI	CTNAG	3 cut(s)	177, 1245, 2104
BstDSI	CCRYGG	2 cut(s)	257, 727
BstENI	CCTNNNNNAGG	2 cut(s)	1773, 2118
BstF5I	GGATG	5 cut(s)	345, 948, 1236, 1294, 1374
BstFNI	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
BstH2I	RGCGCY	2 cut(s)	184, 199
BstHHI	GCGC	9 cut(s)	141, 183, 198, 353, 385, 387, 458, 1459, 1549
BstKTI	GATC	5 cut(s)	1024, 1489, 1524, 1745, 2132
BstMAI	GTCTC	2 cut(s)	351, 1241
BstMBI	GATC	5 cut(s)	1021, 1486, 1521, 1742, 2129
BstMWI	GCNNNNNNNGC	9 cut(s)	33, 167, 189, 195, 198, 204, 440, 567, 931
BstNI	CCWGG	4 cut(s)	587, 884, 1009, 1058
BstSCI	CCNGG	6 cut(s)	585, 882, 948, 1007, 1056, 1284
BstSFI	CTRYAG	2 cut(s)	622, 1943
BstUI	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
BstV1I	GCAGC	1 cut(s)	430
BstV2I	GAAGAC	2 cut(s)	412, 1803
BstX2I	RGATCY	2 cut(s)	1486, 2129
BstYI	RGATCY	2 cut(s)	1486, 2129
BsuI	GTATCC	2 cut(s)	1066, 1688
BsuRI	GGCC	5 cut(s)	371, 570, 585, 726, 1560
BtgI	CCRYGG	2 cut(s)	257, 727
BtgZI	GCGATG	2 cut(s)	917, 1134
BtsCI	GGATG	5 cut(s)	345, 948, 1236, 1294, 1374
BtsI	GCAGTG	1 cut(s)	556
BtsIMutI	CAGTG	1 cut(s)	556
BveI	ACCTGC	2 cut(s)	434, 2122
Cac8I	GCNNGC	4 cut(s)	17, 194, 385, 1961
CfoI	GCGC	9 cut(s)	141, 183, 198, 353, 385, 387, 458, 1459, 1549
Cfr10I	RCCGGY	1 cut(s)	645
Cfr13I	GGNCC	9 cut(s)	262, 308, 568, 583, 724, 946, 1778, 1856, 1898
CseI	GACGC	5 cut(s)	195, 322, 374, 482, 1315
Csp6I	GTAC	3 cut(s)	451, 2033, 2108
CviAII	CATG	2 cut(s)	989, 2063
CviQI	GTAC	3 cut(s)	451, 2033, 2108
DdeI	CTNAG	3 cut(s)	177, 1245, 2104
DpnI	GATC	5 cut(s)	1023, 1488, 1523, 1744, 2131
DpnII	GATC	5 cut(s)	1021, 1486, 1521, 1742, 2129
DrdI	GACNNNNNNGTC	1 cut(s)	1803
DseDI	GACNNNNNNGTC	1 cut(s)	1803
Eam1104I	CTCTTC	4 cut(s)	491, 1569, 1653, 2011
EarI	CTCTTC	4 cut(s)	491, 1569, 1653, 2011
EciI	GGCGGA	3 cut(s)	23, 148, 286
Eco24I	GRGCYC	1 cut(s)	216
Eco47I	GGWCC	6 cut(s)	262, 308, 946, 1778, 1856, 1898
Eco57I	CTGAAG	1 cut(s)	2109
EcoNI	CCTNNNNNAGG	2 cut(s)	1773, 2118
EcoO109I	RGGNCCY	2 cut(s)	262, 1778
EcoRI	GAATTC	3 cut(s)	853, 1066, 1162
EcoRII	CCWGG	4 cut(s)	585, 882, 1007, 1056
EcoT22I	ATGCAT	1 cut(s)	1321
EcoT38I	GRGCYC	1 cut(s)	216
FaeI	CATG	2 cut(s)	992, 2066
FalI	AAGNNNNNCTT	4 cut(s)	755, 787, 1533, 1565
FaqI	GGGAC	7 cut(s)	251, 275, 294, 612, 932, 1165, 2137
FatI	CATG	2 cut(s)	988, 2062
FauI	CCCGC	7 cut(s)	225, 284, 320, 1053, 1183, 1683, 2088
FbaI	TGATCA	1 cut(s)	1521
FblI	GTMKAC	1 cut(s)	1449
Fnu4HI	GCNGC	9 cut(s)	37, 171, 174, 190, 199, 369, 388, 444, 1889
FokI	GGATG	5 cut(s)	332, 955, 1243, 1301, 1381
FriOI	GRGCYC	1 cut(s)	216
Fsp4HI	GCNGC	9 cut(s)	37, 171, 174, 190, 199, 369, 388, 444, 1889
FspBI	CTAG	5 cut(s)	1212, 1398, 1710, 1833, 2195
FspI	TGCGCA	1 cut(s)	1458
GlaI	GCGC	9 cut(s)	140, 182, 197, 352, 384, 386, 457, 1458, 1548
GluI	GCNGC	9 cut(s)	37, 171, 174, 190, 199, 369, 388, 444, 1889
GsaI	CCCAGC	2 cut(s)	678, 1650
GsuI	CTGGAG	2 cut(s)	608, 1590
HaeII	RGCGCY	2 cut(s)	184, 199
HaeIII	GGCC	5 cut(s)	371, 570, 585, 726, 1560
HapII	CCGG	5 cut(s)	354, 646, 950, 1238, 1286
HgaI	GACGC	5 cut(s)	195, 322, 374, 482, 1315
HhaI	GCGC	9 cut(s)	141, 183, 198, 353, 385, 387, 458, 1459, 1549
Hin1I	GRCGYC	1 cut(s)	187
Hin1II	CATG	2 cut(s)	992, 2066
Hin6I	GCGC	9 cut(s)	139, 181, 196, 351, 383, 385, 456, 1457, 1547
HinP1I	GCGC	9 cut(s)	139, 181, 196, 351, 383, 385, 456, 1457, 1547
HindIII	AAGCTT	3 cut(s)	1106, 2070, 2091
HinfI	GANTC	6 cut(s)	239, 737, 908, 1297, 1663, 2055
HpaII	CCGG	5 cut(s)	354, 646, 950, 1238, 1286
HphI	GGTGA	8 cut(s)	415, 698, 1171, 1594, 1667, 1920, 2126, 2133
Hpy166II	GTNNAC	2 cut(s)	697, 1450
Hpy188I	TCNGA	6 cut(s)	376, 1072, 1668, 2089, 2100, 2149
Hpy188III	TCNNGA	9 cut(s)	236, 850, 1294, 1776, 1854, 1875, 1896, 2013, 2052
Hpy8I	GTNNAC	2 cut(s)	697, 1450
Hpy99I	CGWCG	4 cut(s)	189, 237, 308, 566
HpyCH4III	ACNGT	5 cut(s)	418, 626, 1454, 1998, 2172
HpyCH4IV	ACGT	3 cut(s)	860, 1185, 1880
HpyCH4V	TGCA	6 cut(s)	429, 446, 611, 1259, 1319, 1536
HpyF10VI	GCNNNNNNNGC	9 cut(s)	33, 167, 189, 195, 198, 204, 440, 567, 931
HpyF3I	CTNAG	3 cut(s)	177, 1245, 2104
HpySE526I	ACGT	3 cut(s)	860, 1185, 1880
Hsp92I	GRCGYC	1 cut(s)	187
Hsp92II	CATG	2 cut(s)	992, 2066
HspAI	GCGC	9 cut(s)	139, 181, 196, 351, 383, 385, 456, 1457, 1547
KflI	GGGWCCC	1 cut(s)	262
Ksp22I	TGATCA	1 cut(s)	1521
Kzo9I	GATC	5 cut(s)	1021, 1486, 1521, 1742, 2129
LguI	GCTCTTC	1 cut(s)	2011
LmnI	GCTCC	4 cut(s)	24, 731, 1765, 2015
Lsp1109I	GCAGC	1 cut(s)	430
LweI	GCATC	6 cut(s)	216, 661, 818, 1306, 1336, 1489
MaeI	CTAG	5 cut(s)	1212, 1398, 1710, 1833, 2195
MaeII	ACGT	3 cut(s)	860, 1185, 1880
MaeIII	GTNAC	2 cut(s)	637, 1291
MalI	GATC	5 cut(s)	1023, 1488, 1523, 1744, 2131
MbiI	CCGCTC	4 cut(s)	27, 220, 390, 734
MboI	GATC	5 cut(s)	1021, 1486, 1521, 1742, 2129
MfeI	CAATTG	1 cut(s)	1128
MflI	RGATCY	2 cut(s)	1486, 2129
MhlI	GDGCHC	1 cut(s)	216
MlyI	GAGTC	4 cut(s)	233, 917, 1291, 2049
MmeI	TCCRAC	4 cut(s)	426, 1011, 1759, 2161
Mph1103I	ATGCAT	1 cut(s)	1321
MroXI	GAANNNNTTC	2 cut(s)	1662, 2094
MspA1I	CMGCKG	1 cut(s)	176
MspCI	CTTAAG	2 cut(s)	983, 1352
MspI	CCGG	5 cut(s)	354, 646, 950, 1238, 1286
MspR9I	CCNGG	6 cut(s)	587, 884, 950, 1009, 1058, 1286
MunI	CAATTG	1 cut(s)	1128
MvaI	CCWGG	4 cut(s)	587, 884, 1009, 1058
MvnI	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
MwoI	GCNNNNNNNGC	9 cut(s)	33, 167, 189, 195, 198, 204, 440, 567, 931
NciI	CCSGG	2 cut(s)	950, 1286
NdeII	GATC	5 cut(s)	1021, 1486, 1521, 1742, 2129
NlaIII	CATG	2 cut(s)	992, 2066
NmeAIII	GCCGAG	1 cut(s)	1705
NmuCI	GTSAC	2 cut(s)	637, 1291
NsbI	TGCGCA	1 cut(s)	1458
NsiI	ATGCAT	1 cut(s)	1321
NspV	TTCGAA	1 cut(s)	2075
PaqCI	CACCTGC	2 cut(s)	434, 2122
PauI	GCGCGC	1 cut(s)	383
PciSI	GCTCTTC	1 cut(s)	2011
PcsI	WCGNNNNNNNCGW	1 cut(s)	372
PdmI	GAANNNNTTC	2 cut(s)	1662, 2094
PfeI	GAWTC	2 cut(s)	737, 1663
PflMI	CCANNNNNTGG	1 cut(s)	1874
PkrI	GCNGC	9 cut(s)	38, 172, 175, 191, 200, 370, 389, 445, 1890
PleI	GAGTC	4 cut(s)	233, 916, 1291, 2049
PpsI	GAGTC	4 cut(s)	233, 916, 1291, 2049
PpuMI	RGGWCCY	2 cut(s)	262, 1778
PshBI	ATTAAT	1 cut(s)	549
PsiI	TTATAA	2 cut(s)	537, 750
Psp1406I	AACGTT	1 cut(s)	860
Psp5II	RGGWCCY	2 cut(s)	262, 1778
Psp6I	CCWGG	4 cut(s)	585, 882, 1007, 1056
PspFI	CCCAGC	2 cut(s)	674, 1646
PspGI	CCWGG	4 cut(s)	585, 882, 1007, 1056
PspPI	GGNCC	9 cut(s)	262, 308, 568, 583, 724, 946, 1778, 1856, 1898
PspPPI	RGGWCCY	2 cut(s)	262, 1778
PsuI	RGATCY	2 cut(s)	1486, 2129
PteI	GCGCGC	1 cut(s)	383
RsaI	GTAC	3 cut(s)	452, 2034, 2109
RsaNI	GTAC	3 cut(s)	451, 2033, 2108
SapI	GCTCTTC	1 cut(s)	2011
SatI	GCNGC	9 cut(s)	37, 171, 174, 190, 199, 369, 388, 444, 1889
Sau3AI	GATC	5 cut(s)	1021, 1486, 1521, 1742, 2129
Sau96I	GGNCC	9 cut(s)	262, 308, 568, 583, 724, 946, 1778, 1856, 1898
SchI	GAGTC	4 cut(s)	233, 917, 1291, 2049
ScrFI	CCNGG	6 cut(s)	587, 884, 950, 1009, 1058, 1286
SduI	GDGCHC	1 cut(s)	216
SfaNI	GCATC	6 cut(s)	216, 661, 818, 1306, 1336, 1489
SfcI	CTRYAG	2 cut(s)	622, 1943
SfuI	TTCGAA	1 cut(s)	2075
SinI	GGWCC	6 cut(s)	262, 308, 946, 1778, 1856, 1898
SmlI	CTYRAG	3 cut(s)	983, 1352, 2118
SmoI	CTYRAG	3 cut(s)	983, 1352, 2118
SspMI	CTAG	5 cut(s)	1212, 1398, 1710, 1833, 2195
StyD4I	CCNGG	6 cut(s)	585, 882, 948, 1007, 1056, 1284
TaaI	ACNGT	5 cut(s)	418, 626, 1454, 1998, 2172
TaiI	ACGT	3 cut(s)	863, 1188, 1883
TaqI	TCGA	6 cut(s)	210, 576, 669, 1020, 1419, 2075
TaqII	GACCGA	1 cut(s)	296
TauI	GCSGC	8 cut(s)	39, 173, 176, 192, 201, 371, 390, 1891
TfiI	GAWTC	2 cut(s)	737, 1663
TscAI	CASTG	1 cut(s)	563
TseFI	GTSAC	2 cut(s)	637, 1291
TseI	GCWGC	1 cut(s)	443
Tsp45I	GTSAC	2 cut(s)	637, 1291
TspDTI	ATGAA	3 cut(s)	1437, 1527, 1998
TspGWI	ACGGA	5 cut(s)	221, 744, 1761, 1797, 2037
TspRI	CASTG	1 cut(s)	563
Van91I	CCANNNNNTGG	1 cut(s)	1874
Vha464I	CTTAAG	2 cut(s)	983, 1352
VpaK11BI	GGWCC	6 cut(s)	262, 308, 946, 1778, 1856, 1898
VspI	ATTAAT	1 cut(s)	549
XagI	CCTNNNNNAGG	2 cut(s)	1773, 2118
XapI	RAATTY	3 cut(s)	853, 1066, 1162
XmiI	GTMKAC	1 cut(s)	1449
XmnI	GAANNNNTTC	2 cut(s)	1662, 2094
XspI	CTAG	5 cut(s)	1212, 1398, 1710, 1833, 2195
Zsp2I	ATGCAT	1 cut(s)	1321

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.