Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0003587

Physical Location & Seq

Genomic Coordinates Forward (+)

38646547 .. 38648769

Gene Structure 2223 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g38950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGTCATTCTACCGCCTGCTCCTCCGCTCTCTCCGCCGCCCTTCCACCCCAACAACCCTACCCCTAACCCAATCCCTCTCCTCTCTCCACCTCCACAACCCTAGCCATAACATTCCTCTCCATCTCACCACCCCCACGCGCACCTTCGCCTTCTCCTCCGCCGAAGAAGCCGCCGCTGAGCGCCGACGCCGCAAGCGCCGCCTCCGCATCGAGCCCCCGCTCAACGCCCTCCGTCGGGACTCACGCCCCCCTCCTCCACGGGACCCGAACGCTCCCCGCCTACCTGACACCACCTCCGCCCTCGTCGGTCCCCGCCTCAACCTCCACAACCGCGTCCAGTCGCTCATCCGCGCCGGAGACTTGGACGCGGCCTCCGAGGTTGCGCGCCGCTCGGTTTTCTCCAACACTCGCCCCACCGTCTTCACCTGCAATGCCATTGTGGCTGCAATGTACCGCGCCAAGAGGTATAATGACGCTATTGCCCTCTTCCACTTCTTCTTCAATCAATCAAACATTGTTCCTAACATTGTATCTTATAATAATTTGATTAATACTCACTGCGACGAGGGCCGTGTCGATGTGGGCCTGGAGATTTATCGGCATATAATTGCAAATTGCCCCTACAGTCCCTCGCCCGTGACATACCGGCATTTGACTAAAGGGTTGGTCGATGCTGGAAGGATAGGTGAGGGTGTGGACTTGTTGAGGGAGATGTTGAATAAGGGCCACGGAGCGGATTCTTTGGTTTATAATAATTTGATTAAGGGGTTCTTACATTTGGAGAATATGGAGAAGGCTGTTGAGCTTTTTGATGAGCTTAAAGAGAGATGTTTGGTTTATGATGGGGTCGTGAATTCAACGTTTATGGATTGGTTTTTCAACCAGGGGAAAGAGAAGGAGGCGATGGAGTCATACAAGTCCTTGCTTGATAGACAGTTTAGGATGGTCCCGGCAACTTGTAATGTTCTCTTGGAGGTATTGCTTAAGCATGGGAAGAAGAAGGAAGCCTGGGATTTGATCGATCAGATGTTGGATAATCACACCCCGCCAAACTTCCAGGCTGTGAATTCGGATACATTTAACATTATGGTTAATGAGTGTTTTAAGCTTGGAAAGTGTGATGAGGCGATTGCCACCTTCAAGAAGGTGGGGACAAAGGTGAATTCAAAGCCATTTTCTATGGATGTTGCGGGGTATAACAATATCATTGCTAGATATTGTGACAATGGGATGTTGCTGGAGGCTGAGACACTGTTTGCAGAATTGTCCTCAAAGTCATTGACCCCGGATGTCACGACTCATAGGACGCTGATTGATGCATACTTGAAAGTAGAGAGGATAGATGATGCTCTTAAGATATTTAGCAGGATGGTGGAGGTTGGTCTGCGAGTGGTTGCTAGTCTTGGTAATAGGGTGTTTGATGAATTGATTAAGAACGGGAAGGTAGTAGACTGTGCGCAGATTTTGAAGAAAATGGGAGAAAAAGAACCAAAACCCGATGCCAGTTTTTATGAAGCTGTGATCAAGGGCCTTTGCAATGAAGGTGCGCTTGATACAGGCCGTGATTTATTGGAAGAGATGGTGAGGTATGGCATTGGTGTTCCTCCAGCATTACAGCAGTTTGTAAATGAGGTTTTTGGAGAAGCTGGGCGTGGTGAAGAGATTCAGAGAGTATTAAATACAAATAGGCGAGGATACCAACCACTACCTAGGGAGGCACCACCTCGGCAATTCCAACCAAGGTCGCCTCAAATGGCAGGACAGGAGCCTCCGTCAGGACCTTCTCAAATGGCAGGACAATATCCAGCCACCATCTGGAACGTATCAGCCATGGCTACAAGCCAGCACCCCACAGCTCAATCCCCTCAAATGACTGGACAGTATTACTCTCCATCAGGAGCCTCCCAAACAGCAGTACCACTCCACCCTCCGTCTGGACTCCCTCATGTGACAGCTTTGTACCCGCCATCTGAAGCTTTTCAGAGCTTAGGACCACAGCGCCCTCTGTCAGAACCTGCTCAAGGGACAGGATCTCACCAATCACCATCAGAACCCCCACAAAATACAGAACAGGTGGCAGCTGCTTGGTCCTTAGATATCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051301 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

702

Amino Acids

78.2

Weight (kDa)

8.51

Isoelectric Point (pI)

49.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	395 - 442	3.2e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003587)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10270 AT3G60980
fragaria_vesca	FvH4_5g27880
malus_domestica	MD08G1246600.v1.1 MD15G1441500.v1.1
prunus_persica	Prupe.1G583600_v2.0.a1 Prupe.1G583600_v2.0.a1 Prupe.1G583600_v2.0.a1
pyrus_communis	pycom08g21380 pycom11g13110 pycom11g13120 pycom15g38950 pycom17g02590
rosa_chinensis	RchiOBHm_Chr3g0472581 RchiOBHm_Chr7g0220071
rosa_laevigata	RLG00000002259 RLG00000024069
rosa_multiflora	Rmu_co8321059.1_g000001 Rmu_sc0003510.1_g000024 Rmu_sc0003510.1_g000025 Rmu_sc0005838.1_g000004 Rmu_sc0007553.1_g000004 Rmu_sc0011581.1_g000008
rosa_roxburghii	Rroxscaffold_3G00239800 Rroxscaffold_6G00408800
rosa_rugosa	Rorug07G0188700
rosa_samantha	Rh3AG178600 Rh3BG204500 Rh3CG194900 Rh3CG201900 Rh7AG332400 Rh7BG322300 Rh7CG349900 Rh7DG328000
rosa_wichuraiana	Rw7G027990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	537, 750
AarI	CACCTGC	1 cut(s)	434
Acc16I	TGCGCA	1 cut(s)	1458
Acc36I	ACCTGC	2 cut(s)	434, 2023
AccB1I	GGYRCC	1 cut(s)	1717
AccB7I	CCANNNNNTGG	1 cut(s)	1815
AccBSI	CCGCTC	4 cut(s)	27, 220, 390, 734
AccI	GTMKAC	1 cut(s)	1449
AccII	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
AclI	AACGTT	1 cut(s)	860
AclWI	GGATC	1 cut(s)	2038
AcsI	RAATTY	3 cut(s)	853, 1066, 1162
AcuI	CTGAAG	1 cut(s)	1992
AcyI	GRCGYC	1 cut(s)	187
AfaI	GTAC	3 cut(s)	452, 1917, 1961
AfiI	CCNNNNNNNGG	7 cut(s)	234, 235, 733, 1775, 1815, 1934, 2021
AflII	CTTAAG	2 cut(s)	983, 1352
AgsI	TTSAA	8 cut(s)	502, 718, 858, 880, 1141, 1167, 1327, 1468
AjnI	CCWGG	4 cut(s)	585, 882, 1007, 1056
Alw26I	GTCTC	2 cut(s)	351, 1241
AlwI	GGATC	1 cut(s)	2038
AlwNI	CAGNNNCTG	1 cut(s)	2015
AoxI	GGCC	6 cut(s)	369, 568, 583, 724, 1528, 1558
ApeKI	GCWGC	3 cut(s)	443, 2078, 2081
ApoI	RAATTY	3 cut(s)	853, 1066, 1162
AseI	ATTAAT	1 cut(s)	549
Asp700I	GAANNNNTTC	2 cut(s)	1662, 1977
AspA2I	CCTAGG	1 cut(s)	1709
AsuC2I	CCSGG	2 cut(s)	950, 1286
AsuHPI	GGTGA	8 cut(s)	118, 415, 698, 1171, 1594, 1667, 2027, 2034
AvaII	GGWCC	6 cut(s)	262, 308, 946, 1778, 1991, 2088
AvrII	CCTAGG	1 cut(s)	1709
BaeI	ACNNNNGTAYC	2 cut(s)	1899, 1932
BanI	GGYRCC	1 cut(s)	1717
BanII	GRGCYC	1 cut(s)	216
BbsI	GAAGAC	1 cut(s)	412
BbvI	GCAGC	3 cut(s)	430, 2068, 2090
BceAI	ACGGC	2 cut(s)	555, 1545
BciT130I	CCWGG	4 cut(s)	587, 884, 1009, 1058
BciVI	GTATCC	2 cut(s)	1066, 1688
BclI	TGATCA	1 cut(s)	1521
BcnI	CCSGG	2 cut(s)	950, 1286
BcoDI	GTCTC	2 cut(s)	351, 1241
BfaI	CTAG	4 cut(s)	102, 1212, 1398, 1710
BfmI	CTRYAG	1 cut(s)	622
BfoI	RGCGCY	3 cut(s)	184, 199, 2002
BfrI	CTTAAG	2 cut(s)	983, 1352
BfuAI	ACCTGC	2 cut(s)	434, 2023
BfuI	GTATCC	2 cut(s)	1066, 1688
BglI	GCCNNNNNGGC	1 cut(s)	440
BlnI	CCTAGG	1 cut(s)	1709
BlpI	GCTNAGC	1 cut(s)	177
Bme1390I	CCNGG	6 cut(s)	587, 884, 950, 1009, 1058, 1286
Bme18I	GGWCC	6 cut(s)	262, 308, 946, 1778, 1991, 2088
BmiI	GGNNCC	7 cut(s)	263, 264, 310, 948, 1719, 1767, 1900
BmrFI	CCNGG	6 cut(s)	587, 884, 950, 1009, 1058, 1286
BmsI	GCATC	5 cut(s)	216, 661, 1306, 1336, 1489
BpiI	GAAGAC	1 cut(s)	412
BpmI	CTGGAG	3 cut(s)	608, 1259, 1590
Bpu10I	CCTNAGC	1 cut(s)	1987
Bpu1102I	GCTNAGC	1 cut(s)	177
BpuEI	CTTGAG	1 cut(s)	2004
BpuMI	CCSGG	2 cut(s)	950, 1286
Bsa29I	ATCGAT	1 cut(s)	1020
BsaHI	GRCGYC	1 cut(s)	187
BsaXI	ACNNNNNCTCC	6 cut(s)	278, 308, 356, 386, 1757, 1787
Bsc4I	CCNNNNNNNGG	7 cut(s)	234, 235, 733, 1775, 1815, 1934, 2021
Bse118I	RCCGGY	1 cut(s)	645
Bse1I	ACTGG	3 cut(s)	337, 1503, 1879
Bse3DI	GCAATG	4 cut(s)	436, 453, 1206, 1543
BseBI	CCWGG	4 cut(s)	587, 884, 1009, 1058
BseCI	ATCGAT	1 cut(s)	1020
BseGI	GGATG	6 cut(s)	345, 948, 1189, 1236, 1294, 1374
BseLI	CCNNNNNNNGG	7 cut(s)	234, 235, 733, 1775, 1815, 1934, 2021
BseMI	GCAATG	4 cut(s)	436, 453, 1206, 1543
BseMII	CTCAG	2 cut(s)	168, 1236
BseNI	ACTGG	3 cut(s)	337, 1503, 1879
BsePI	GCGCGC	1 cut(s)	383
BseRI	GAGGAG	4 cut(s)	11, 70, 145, 243
BseXI	GCAGC	3 cut(s)	430, 2068, 2090
BseYI	CCCAGC	1 cut(s)	1646
Bsh1236I	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
BshFI	GGCC	6 cut(s)	371, 570, 585, 726, 1530, 1560
BshNI	GGYRCC	1 cut(s)	1717
BshVI	ATCGAT	1 cut(s)	1020
BsiSI	CCGG	4 cut(s)	354, 646, 950, 1286
BslFI	GGGAC	7 cut(s)	251, 275, 294, 612, 932, 1165, 2038
BslI	CCNNNNNNNGG	7 cut(s)	234, 235, 733, 1775, 1815, 1934, 2021
BsmAI	GTCTC	2 cut(s)	351, 1241
BsmFI	GGGAC	7 cut(s)	251, 275, 294, 612, 932, 1165, 2038
BsnI	GGCC	6 cut(s)	371, 570, 585, 726, 1530, 1560
Bsp1286I	GDGCHC	1 cut(s)	216
Bsp143I	GATC	4 cut(s)	1017, 1021, 1521, 2030
Bsp1720I	GCTNAGC	1 cut(s)	177
Bsp19I	CCATGG	1 cut(s)	1830
BspANI	GGCC	6 cut(s)	371, 570, 585, 726, 1530, 1560
BspCNI	CTCAG	2 cut(s)	169, 1237
BspDI	ATCGAT	1 cut(s)	1020
BspFNI	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
BspLI	GGNNCC	7 cut(s)	263, 264, 310, 948, 1719, 1767, 1900
BspMI	ACCTGC	2 cut(s)	434, 2023
BspPI	GGATC	1 cut(s)	2038
BspT107I	GGYRCC	1 cut(s)	1717
BspTI	CTTAAG	2 cut(s)	983, 1352
BsrBI	CCGCTC	4 cut(s)	27, 220, 390, 734
BsrDI	GCAATG	4 cut(s)	436, 453, 1206, 1543
BsrFI	RCCGGY	1 cut(s)	645
BsrI	ACTGG	3 cut(s)	337, 1503, 1879
BssAI	RCCGGY	1 cut(s)	645
BssHII	GCGCGC	1 cut(s)	383
BssMI	GATC	4 cut(s)	1017, 1021, 1521, 2030
BssNI	GRCGYC	1 cut(s)	187
BssT1I	CCWWGG	3 cut(s)	1709, 1739, 1830
Bst2UI	CCWGG	4 cut(s)	587, 884, 1009, 1058
Bst4CI	ACNGT	6 cut(s)	418, 626, 936, 1254, 1454, 1881
Bst6I	CTCTTC	3 cut(s)	491, 1569, 1653
BstACI	GRCGYC	1 cut(s)	187
BstAFI	CTTAAG	2 cut(s)	983, 1352
BstC8I	GCNNGC	4 cut(s)	17, 194, 385, 1844
BstDEI	CTNAG	4 cut(s)	177, 1245, 1987, 2092
BstDSI	CCRYGG	3 cut(s)	257, 727, 1830
BstENI	CCTNNNNNAGG	2 cut(s)	1773, 2019
BstF5I	GGATG	6 cut(s)	345, 948, 1189, 1236, 1294, 1374
BstFNI	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
BstH2I	RGCGCY	3 cut(s)	184, 199, 2002
BstKTI	GATC	4 cut(s)	1020, 1024, 1524, 2033
BstMAI	GTCTC	2 cut(s)	351, 1241
BstMBI	GATC	4 cut(s)	1017, 1021, 1521, 2030
BstMWI	GCNNNNNNNGC	8 cut(s)	33, 167, 189, 195, 198, 204, 440, 567
BstNI	CCWGG	4 cut(s)	587, 884, 1009, 1058
BstSCI	CCNGG	6 cut(s)	585, 882, 948, 1007, 1056, 1284
BstSFI	CTRYAG	1 cut(s)	622
BstUI	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
BstV1I	GCAGC	3 cut(s)	430, 2068, 2090
BstV2I	GAAGAC	1 cut(s)	412
BstX2I	RGATCY	1 cut(s)	2030
BstYI	RGATCY	1 cut(s)	2030
Bsu15I	ATCGAT	1 cut(s)	1020
BsuI	GTATCC	2 cut(s)	1066, 1688
BsuRI	GGCC	6 cut(s)	371, 570, 585, 726, 1530, 1560
BsuTUI	ATCGAT	1 cut(s)	1020
BtgI	CCRYGG	3 cut(s)	257, 727, 1830
BtgZI	GCGATG	1 cut(s)	917
BtsCI	GGATG	6 cut(s)	345, 948, 1189, 1236, 1294, 1374
BtsI	GCAGTG	1 cut(s)	556
BtsIMutI	CAGTG	2 cut(s)	556, 1250
BveI	ACCTGC	2 cut(s)	434, 2023
Cac8I	GCNNGC	4 cut(s)	17, 194, 385, 1844
CaiI	CAGNNNCTG	1 cut(s)	2015
Cfr10I	RCCGGY	1 cut(s)	645
ClaI	ATCGAT	1 cut(s)	1020
CseI	GACGC	5 cut(s)	195, 322, 374, 482, 1315
Csp6I	GTAC	3 cut(s)	451, 1916, 1960
CviAII	CATG	3 cut(s)	989, 1831, 1946
CviQI	GTAC	3 cut(s)	451, 1916, 1960
DdeI	CTNAG	4 cut(s)	177, 1245, 1987, 2092
DpnI	GATC	4 cut(s)	1019, 1023, 1523, 2032
DpnII	GATC	4 cut(s)	1017, 1021, 1521, 2030
Eam1104I	CTCTTC	3 cut(s)	491, 1569, 1653
EarI	CTCTTC	3 cut(s)	491, 1569, 1653
EciI	GGCGGA	3 cut(s)	23, 148, 286
Eco130I	CCWWGG	3 cut(s)	1709, 1739, 1830
Eco24I	GRGCYC	1 cut(s)	216
Eco32I	GATATC	1 cut(s)	2098
Eco47I	GGWCC	6 cut(s)	262, 308, 946, 1778, 1991, 2088
Eco57I	CTGAAG	1 cut(s)	1992
EcoNI	CCTNNNNNAGG	2 cut(s)	1773, 2019
EcoO109I	RGGNCCY	3 cut(s)	262, 1528, 1778
EcoRI	GAATTC	3 cut(s)	853, 1066, 1162
EcoRII	CCWGG	4 cut(s)	585, 882, 1007, 1056
EcoRV	GATATC	1 cut(s)	2098
EcoT14I	CCWWGG	3 cut(s)	1709, 1739, 1830
EcoT22I	ATGCAT	1 cut(s)	1321
EcoT38I	GRGCYC	1 cut(s)	216
ErhI	CCWWGG	3 cut(s)	1709, 1739, 1830
FaeI	CATG	3 cut(s)	992, 1834, 1949
FalI	AAGNNNNNCTT	4 cut(s)	755, 787, 1533, 1565
FaqI	GGGAC	7 cut(s)	251, 275, 294, 612, 932, 1165, 2038
FatI	CATG	3 cut(s)	988, 1830, 1945
FauI	CCCGC	6 cut(s)	225, 284, 320, 1053, 1183, 1971
FbaI	TGATCA	1 cut(s)	1521
FblI	GTMKAC	1 cut(s)	1449
FokI	GGATG	6 cut(s)	332, 955, 1196, 1243, 1301, 1381
FriOI	GRGCYC	1 cut(s)	216
FspBI	CTAG	4 cut(s)	102, 1212, 1398, 1710
FspI	TGCGCA	1 cut(s)	1458
GsaI	CCCAGC	1 cut(s)	1650
GsuI	CTGGAG	3 cut(s)	608, 1259, 1590
HaeII	RGCGCY	3 cut(s)	184, 199, 2002
HaeIII	GGCC	6 cut(s)	371, 570, 585, 726, 1530, 1560
HapII	CCGG	4 cut(s)	354, 646, 950, 1286
HgaI	GACGC	5 cut(s)	195, 322, 374, 482, 1315
Hin1I	GRCGYC	1 cut(s)	187
Hin1II	CATG	3 cut(s)	992, 1834, 1949
HindIII	AAGCTT	2 cut(s)	1106, 1974
HinfI	GANTC	6 cut(s)	239, 737, 908, 1297, 1663, 1938
HpaII	CCGG	4 cut(s)	354, 646, 950, 1286
HphI	GGTGA	8 cut(s)	118, 415, 698, 1171, 1594, 1667, 2027, 2034
Hpy166II	GTNNAC	2 cut(s)	697, 1450
Hpy188I	TCNGA	8 cut(s)	376, 1026, 1072, 1668, 1972, 1983, 2011, 2050
Hpy188III	TCNNGA	8 cut(s)	236, 850, 1141, 1294, 1776, 1816, 1896, 1935
Hpy8I	GTNNAC	2 cut(s)	697, 1450
Hpy99I	CGWCG	4 cut(s)	189, 237, 308, 566
HpyCH4III	ACNGT	6 cut(s)	418, 626, 936, 1254, 1454, 1881
HpyCH4IV	ACGT	2 cut(s)	860, 1821
HpyCH4V	TGCA	6 cut(s)	429, 446, 611, 1259, 1319, 1536
HpyF10VI	GCNNNNNNNGC	8 cut(s)	33, 167, 189, 195, 198, 204, 440, 567
HpyF3I	CTNAG	4 cut(s)	177, 1245, 1987, 2092
HpySE526I	ACGT	2 cut(s)	860, 1821
Hsp92I	GRCGYC	1 cut(s)	187
Hsp92II	CATG	3 cut(s)	992, 1834, 1949
KflI	GGGWCCC	1 cut(s)	262
Ksp22I	TGATCA	1 cut(s)	1521
Kzo9I	GATC	4 cut(s)	1017, 1021, 1521, 2030
LmnI	GCTCC	5 cut(s)	24, 277, 731, 1765, 1898
Lsp1109I	GCAGC	3 cut(s)	430, 2068, 2090
LweI	GCATC	5 cut(s)	216, 661, 1306, 1336, 1489
MaeI	CTAG	4 cut(s)	102, 1212, 1398, 1710
MaeII	ACGT	2 cut(s)	860, 1821
MaeIII	GTNAC	4 cut(s)	637, 1220, 1291, 1948
MalI	GATC	4 cut(s)	1019, 1023, 1523, 2032
MbiI	CCGCTC	4 cut(s)	27, 220, 390, 734
MboI	GATC	4 cut(s)	1017, 1021, 1521, 2030
MflI	RGATCY	1 cut(s)	2030
MhlI	GDGCHC	1 cut(s)	216
MlyI	GAGTC	4 cut(s)	233, 917, 1291, 1932
MmeI	TCCRAC	3 cut(s)	426, 1011, 1759
Mph1103I	ATGCAT	1 cut(s)	1321
MroXI	GAANNNNTTC	2 cut(s)	1662, 1977
MspA1I	CMGCKG	2 cut(s)	176, 2081
MspCI	CTTAAG	2 cut(s)	983, 1352
MspI	CCGG	4 cut(s)	354, 646, 950, 1286
MspR9I	CCNGG	6 cut(s)	587, 884, 950, 1009, 1058, 1286
MvaI	CCWGG	4 cut(s)	587, 884, 1009, 1058
MvnI	CGCG	6 cut(s)	139, 333, 351, 368, 385, 456
MwoI	GCNNNNNNNGC	8 cut(s)	33, 167, 189, 195, 198, 204, 440, 567
NciI	CCSGG	2 cut(s)	950, 1286
NcoI	CCATGG	1 cut(s)	1830
NdeII	GATC	4 cut(s)	1017, 1021, 1521, 2030
NlaIII	CATG	3 cut(s)	992, 1834, 1949
NlaIV	GGNNCC	7 cut(s)	263, 264, 310, 948, 1719, 1767, 1900
NmeAIII	GCCGAG	1 cut(s)	1705
NmuCI	GTSAC	4 cut(s)	637, 1220, 1291, 1948
NsbI	TGCGCA	1 cut(s)	1458
NsiI	ATGCAT	1 cut(s)	1321
PaqCI	CACCTGC	1 cut(s)	434
PauI	GCGCGC	1 cut(s)	383
PcsI	WCGNNNNNNNCGW	1 cut(s)	372
PdmI	GAANNNNTTC	2 cut(s)	1662, 1977
PfeI	GAWTC	2 cut(s)	737, 1663
PflMI	CCANNNNNTGG	1 cut(s)	1815
PleI	GAGTC	4 cut(s)	233, 916, 1291, 1932
PpsI	GAGTC	4 cut(s)	233, 916, 1291, 1932
PpuMI	RGGWCCY	2 cut(s)	262, 1778
PshBI	ATTAAT	1 cut(s)	549
PsiI	TTATAA	2 cut(s)	537, 750
Psp1406I	AACGTT	1 cut(s)	860
Psp5II	RGGWCCY	2 cut(s)	262, 1778
Psp6I	CCWGG	4 cut(s)	585, 882, 1007, 1056
PspFI	CCCAGC	1 cut(s)	1646
PspGI	CCWGG	4 cut(s)	585, 882, 1007, 1056
PspN4I	GGNNCC	7 cut(s)	263, 264, 310, 948, 1719, 1767, 1900
PspPPI	RGGWCCY	2 cut(s)	262, 1778
PstNI	CAGNNNCTG	1 cut(s)	2015
PsuI	RGATCY	1 cut(s)	2030
PteI	GCGCGC	1 cut(s)	383
PvuII	CAGCTG	1 cut(s)	2081
RsaI	GTAC	3 cut(s)	452, 1917, 1961
RsaNI	GTAC	3 cut(s)	451, 1916, 1960
Sau3AI	GATC	4 cut(s)	1017, 1021, 1521, 2030
SchI	GAGTC	4 cut(s)	233, 917, 1291, 1932
ScrFI	CCNGG	6 cut(s)	587, 884, 950, 1009, 1058, 1286
SduI	GDGCHC	1 cut(s)	216
SfaNI	GCATC	5 cut(s)	216, 661, 1306, 1336, 1489
SfcI	CTRYAG	1 cut(s)	622
SinI	GGWCC	6 cut(s)	262, 308, 946, 1778, 1991, 2088
SmlI	CTYRAG	3 cut(s)	983, 1352, 2019
SmoI	CTYRAG	3 cut(s)	983, 1352, 2019
SspMI	CTAG	4 cut(s)	102, 1212, 1398, 1710
StyD4I	CCNGG	6 cut(s)	585, 882, 948, 1007, 1056, 1284
StyI	CCWWGG	3 cut(s)	1709, 1739, 1830
TaaI	ACNGT	6 cut(s)	418, 626, 936, 1254, 1454, 1881
TaiI	ACGT	2 cut(s)	863, 1824
TaqI	TCGA	4 cut(s)	210, 576, 669, 1020
TaqII	GACCGA	1 cut(s)	296
TauI	GCSGC	7 cut(s)	39, 173, 176, 192, 201, 371, 390
TfiI	GAWTC	2 cut(s)	737, 1663
TscAI	CASTG	2 cut(s)	563, 1257
TseFI	GTSAC	4 cut(s)	637, 1220, 1291, 1948
TseI	GCWGC	3 cut(s)	443, 2078, 2081
Tsp45I	GTSAC	4 cut(s)	637, 1220, 1291, 1948
TspDTI	ATGAA	3 cut(s)	1437, 1527, 1554
TspGWI	ACGGA	4 cut(s)	221, 744, 1761, 1920
TspRI	CASTG	2 cut(s)	563, 1257
Van91I	CCANNNNNTGG	1 cut(s)	1815
Vha464I	CTTAAG	2 cut(s)	983, 1352
VpaK11BI	GGWCC	6 cut(s)	262, 308, 946, 1778, 1991, 2088
VspI	ATTAAT	1 cut(s)	549
XagI	CCTNNNNNAGG	2 cut(s)	1773, 2019
XapI	RAATTY	3 cut(s)	853, 1066, 1162
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1812, 1931
XmaJI	CCTAGG	1 cut(s)	1709
XmiI	GTMKAC	1 cut(s)	1449
XmnI	GAANNNNTTC	2 cut(s)	1662, 1977
XspI	CTAG	4 cut(s)	102, 1212, 1398, 1710
Zsp2I	ATGCAT	1 cut(s)	1321

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.