Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0004091

Physical Location & Seq

Genomic Coordinates Reverse (-)

24322560 .. 24326341

Gene Structure 3782 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g33590.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3069 bp

ATGGTTAAAATGGCAACAACACTAATGGAGTCTCACTTACGCATTCCCCATTTTCAGTCCATCTACCACCACCCACTCCTCATTTCCGTCAACCCCATCATCATGCCATTACCCAAAACCCACCACCTCCATCTCTACCTCCTCTTCTTCGTCTTCCTCCTCTCCCACGCCGCCGCAGCCGACGAGCTTCAACTCCTACTCAAACTCAAATCCTCCCTCCAAGACTCCAACACCCAACTCTTCTCCACATGGGACTCCTCCTCCACCGCCAACTACTCGTTCTGCTCCTTCACCGGAATTACCTGCAACGGCGTCAATTCCGTCCTAGAAATCGATCTATCCAACAAAAAGCTATCGGGGTCTCTCCCGTTGGACTCCATATGCCAACTTCCATCGTTGGAAAAGCTCGCTTTCGGGTCCAACTTCTTGCACGGGACAATCACGGAGGACTTGAGAAACTGCACGACTTTGAAATACCTGGATTTGGGGAACAACATGTTTTCTGGTTCAGTCCCTGACATATCTTCCTTGTCAAAACTTGAGCATCTTCATTTGAACGGCAGCCATTTTTCCGGGATCTTCCCGTGGACTTCCCTCACCAGCATGACCGGTCTGATTCGTCTGAGCTTGGGTGACAACCCCTTCGATCCTAGCCCGTTCCCGAAGGAAGTTGTAAACCTTAACAAGCTCGAGTGGCTCTACTTGGCGAACTGCAGCATCCAAGGAACTATACCAAGCGAAATCGGCAACTTGGTCGAGCTCATCAACCTGGAATTGTCCGATAACAACATGACAGGAGAAATCCCGGCAGAGATTAGAAAGCTCACCAAGCTCTGGCAGCTGGAGCTCTACGCCAACGGCTTCACCGGAAAGCTTCCTTTCGGGCTAAGAAACCTCACCAAGCTCGAGAACTTCGACGCCTCCGGGAATCATTTAGAAGGCGATTTGAACGAGCTGAGGTTTCTAACAAATTTAGTTTCTCTGCAGCTCTATGACAACAACTTTTCCGGCGAGTTACCGGAAGAATTTGGGGAATTCAAGAGGTTCGTGAATCTATCTTTATACGGTAACAAGCTGACTGGTAATCTGCCTCAGAAACTGGGATCATGGTCCGAGATGAACTTCATCGACGTGTCGGAGAATTTCTTGACCGGTACTATTCCACCGGACATGTGCAAGAAAGGGACGATGACGCAGCTGCTCATGCTTCAGAATAAGTTGACCGGTGATATTCCGGCCAACTACGCAAAGTGCACAACGTTGACTCGATTTAGGGTCAACAACAACTCGCTCTCCGGTGTGGTTCCGGCTGGACTTTGGGGATTGCCGAACGTGACAATCATTGATCTCACTTCGAACCAGTTTGAAGGTCCCATTACTTCCGATATCGGAAACGCCAAGAAGCTTGCGCAGTTTCTTGTGAGTTACAATCGGTTATCTGGTGAATTACCTGACGAGCTTTCGGAGACAACTTCTTTGGTTTCGGTTGTGTTGAATAACAATCAGTTTTCCGGGAAGATTCCGGCGAAGGTAGGGGACTTGAAGCAATTGAGTACTCTGTATTTACAGAGCAACTTATTGTCTTCTTCGATTCCCAAGTCATTAGGAAGTTGTAGCTTCCTGAGTGACTTGAACATGGCAAACAACTCTCTCTCCGGTGAAATTCCATCATCTTTAGGCTCTTTGCCGACCTTGAATTCTCTGGATTTGTCTCATAATGACCTGTCTGGTAAAATCCCGGAAAGTCTAGCATCCCTGAGACTAAGCATGTTTGATCTTTCGCACAACAGACTGACCGGTGCCGTGCCGAAATCTCTCTCGATTGCAGCCTACAACGGCAGCCTTTCCGGTAACCCGGGACTCTGTAGCATGGATATCACCTACTTCCCACGGTGCTCGCCGGAAAAGGAAATGTCCGACGATGTCAGAACACTCATTATTTGCTTCTCAGTGGGCACAGCAATATTGTTTGTTTCACTCATTGGCTTCGTGTTCTTAAAGAGGAAGGAGAAAGATCAAGACCGTTCATTGAAGGAAGAATCTTGGGATGTAAAGTCTTTCCATGTAATAACCTTCAGTGAGGATGAGATTCTTGATTCCATTACTCAAGAGAATCTAATTGGAAAAGGAGGTTCTGGAAATGTCTACAAAGTTTCACTTTCCAATGGCAAAGACCTCGCCGTGAAGCACATATGGAACACTGATCCAAGTGGCCGGAAAATGTTGAAGAGCTCCACACCGATGCTTGGTGGTAGACGGAGCAGCAGTGGTTCGAAATCAAAGGAATTCGATGCTGAGGTGCAAACTTTGAGCTCAATAAGGCATGTGAATGTGGTGAAGTTGTTCTGCAGCATTACTAGTGAGGACTCGAGCTTGTTGGTCTACGAGTACTTACCGAATGGAAGCTTGTGGGATCGGCTGCACATGTGTGAGAAGATGAAGCTTGATTGGGACACAAGGTACGAGATTGCAGTTGGAGCAGCCAAAGGGTTAGAGTATTTACACCATAGCTGTGAGAGGCTAGTGATTCATAGAGATGTCAAGTCGAGTAACATTTTGTTAGATGAGTTCTTGAAGCCCCGGATTGCAGATTTTGGGCTTGCCAAGATCGTTCAGACTAATGGAATCAACGACTCGACTCATGTTGTTGCTGGAACACACGGTTACATAGCTCCTGAATATGGTTATACCTACAAGGTGAATGAAAAGAGCGATGTATATAGCTTCGGAGTAGTACTAATGGAGCTAGTGACTGGGAAAAAGCCGATAGATCCATCCTTTGGTGACAACAAGGACATAGTGAACTGGATATGTGACAACCTGAAGTGTAGGGAGAGTGTGTTAGGTGTCGTGGACTCGTACATTCCTGAGGCCTATAGGGAAGAGGCTATCAAGGTATTGAGAATTGCAATTCTATGCACAGCTAGGCTTCCGGAGCTAAGACCTTCCATGAGAAGTGTTGTTCAAATGCTCGAAGAAGCTCACGAACCAATGAAGTTGCTAGGAATTGTTATCAGCAAAGATGGTTCTAGTAAGAAGATGGAAGTACAGAAGGGAACAGAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001653 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009845 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090351 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

1023

Amino Acids

113.09

Weight (kDa)

5.96

Isoelectric Point (pI)

31.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	60 - 103	5.1e-08	Leucine rich repeat N-terminal domain
LRR_14	PF23598	222 - 330	1.8e-11	Leucine-rich repeat region
Pkinase	PF00069	703 - 989	3.4e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	705 - 991	8.7e-37	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09970 AT1G09970
fragaria_vesca	FvH4_5g33590
malus_domestica	MD08G1210000.v1.1 MD15G1394100.v1.1
prunus_persica	Prupe.1G542300_v2.0.a1
pyrus_communis	pycom08g18120 pycom15g35400 pycom15g35410
rosa_chinensis	RchiOBHm_Chr7g0217331 RchiOBHm_Chr7g0232471
rosa_laevigata	RLG00000001335 RLG00000002489 RLG00000002493
rosa_multiflora	Rmu_sc0001898.1_g000015 Rmu_sc0004663.1_g000011 Rmu_sc0011824.1_g000016
rosa_roxburghii	Rroxscaffold_3G00228280 Rroxscaffold_3G00242430
rosa_rugosa	Rorug07G0168100 Rorug07G0274700
rosa_samantha	Rh7AG307400 Rh7AG307800 Rh7AG428100 Rh7BG298200 Rh7BG402600 Rh7CG326500 Rh7CG326900 Rh7CG447100 Rh7DG306900 Rh7DG418900
rosa_wichuraiana	Rw7G026090 Rw7G035470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1410
Acc36I	ACCTGC	1 cut(s)	311
AccB1I	GGYRCC	1 cut(s)	1799
AccB7I	CCANNNNNTGG	2 cut(s)	834, 2780
AccI	GTMKAC	3 cut(s)	2145, 2254, 2382
AccIII	TCCGGA	1 cut(s)	2932
AciI	CCGC	3 cut(s)	171, 174, 267
AclI	AACGTT	1 cut(s)	1259
AclWI	GGATC	6 cut(s)	584, 641, 1111, 2198, 2421, 2765
AcoI	YGGCCR	2 cut(s)	1236, 2212
AcsI	RAATTY	7 cut(s)	970, 1025, 1034, 1141, 1662, 1696, 2285
AcuI	CTGAAG	3 cut(s)	1193, 2059, 2843
AcyI	GRCGYC	2 cut(s)	312, 918
AfaI	GTAC	7 cut(s)	1156, 1555, 2390, 2462, 2736, 2861, 3048
AfiI	CCNNNNNNNGG	5 cut(s)	484, 834, 2246, 2681, 2780
AflIII	ACRYGT	4 cut(s)	495, 1131, 1170, 2424
AgeI	ACCGGT	4 cut(s)	608, 1151, 1223, 1796
AhlI	ACTAGT	1 cut(s)	2357
AjiI	CACGTC	1 cut(s)	1132
AjnI	CCWGG	2 cut(s)	477, 768
AjuI	GAANNNNNNNTTGG	2 cut(s)	263, 295
AleI	CACNNNNGTG	1 cut(s)	2427
Alw21I	GWGCWC	6 cut(s)	762, 849, 1256, 1898, 2234, 2315
Alw26I	GTCTC	5 cut(s)	36, 366, 1460, 1716, 1753
Alw44I	GTGCAC	1 cut(s)	1252
AlwI	GGATC	6 cut(s)	584, 641, 1111, 2198, 2421, 2765
AlwNI	CAGNNNCTG	2 cut(s)	515, 1099
Ama87I	CYCGRG	4 cut(s)	689, 905, 1855, 2368
Aor13HI	TCCGGA	1 cut(s)	2932
AoxI	GGCC	3 cut(s)	1236, 2212, 2871
ApaLI	GTGCAC	1 cut(s)	1252
ApoI	RAATTY	7 cut(s)	970, 1025, 1034, 1141, 1662, 1696, 2285
ArsI	GACNNNNNNTTYG	4 cut(s)	626, 658, 1459, 1491
AsiGI	ACCGGT	4 cut(s)	608, 1151, 1223, 1796
Asp700I	GAANNNNTTC	1 cut(s)	2342
AspLEI	GCGC	1 cut(s)	1411
AspS9I	GGNCC	3 cut(s)	417, 1110, 1370
AsuC2I	CCSGG	8 cut(s)	574, 806, 925, 1513, 1739, 1856, 1857, 2581
AsuII	TTCGAA	2 cut(s)	1355, 2273
AvaI	CYCGRG	4 cut(s)	689, 905, 1855, 2368
AvaII	GGWCC	3 cut(s)	417, 1110, 1370
AxyI	CCTNAGG	1 cut(s)	2868
BaeGI	GKGCMC	2 cut(s)	1256, 1958
BanI	GGYRCC	1 cut(s)	1799
BanII	GRGCYC	4 cut(s)	762, 849, 2234, 2315
BbsI	GAAGAC	2 cut(s)	145, 1575
Bbv12I	GWGCWC	6 cut(s)	762, 849, 1256, 1898, 2234, 2315
BbvCI	CCTCAGC	2 cut(s)	956, 2295
BccI	CCATC	8 cut(s)	68, 104, 138, 400, 1675, 2782, 3017, 3034
BceAI	ACGGC	6 cut(s)	325, 574, 874, 1787, 1852, 2165
BcgI	CGANNNNNNTGC	4 cut(s)	736, 770, 2158, 2192
BciT130I	CCWGG	2 cut(s)	479, 770
BcnI	CCSGG	8 cut(s)	574, 806, 925, 1513, 1739, 1856, 1857, 2581
BcoDI	GTCTC	5 cut(s)	36, 366, 1460, 1716, 1753
BcuI	ACTAGT	1 cut(s)	2357
BfaI	CTAG	9 cut(s)	326, 651, 1748, 2358, 2522, 2747, 2925, 3002, 3030
BfmI	CTRYAG	5 cut(s)	712, 983, 1864, 2347, 2875
BfuAI	ACCTGC	1 cut(s)	311
BmcAI	AGTACT	3 cut(s)	1555, 2390, 2736
Bme18I	GGWCC	3 cut(s)	417, 1110, 1370
BmeT110I	CYCGRG	4 cut(s)	689, 905, 1855, 2368
BmgBI	CACGTC	1 cut(s)	1132
BmgT120I	GGNCC	3 cut(s)	417, 1110, 1370
BmiI	GGNNCC	4 cut(s)	418, 1305, 1372, 1801
BmrI	ACTGGG	2 cut(s)	1109, 2763
BmsI	GCATC	5 cut(s)	553, 726, 1760, 2232, 2281
BmuI	ACTGGG	2 cut(s)	1109, 2763
BpiI	GAAGAC	2 cut(s)	145, 1575
BpmI	CTGGAG	1 cut(s)	863
Bpu10I	CCTNAGC	2 cut(s)	956, 2295
Bpu14I	TTCGAA	2 cut(s)	1355, 2273
BpuEI	CTTGAG	3 cut(s)	472, 560, 2091
BpuMI	CCSGG	8 cut(s)	574, 806, 925, 1513, 1739, 1856, 1857, 2581
Bsa29I	ATCGAT	1 cut(s)	333
BsaHI	GRCGYC	2 cut(s)	312, 918
BsaI	GGTCTC	1 cut(s)	366
BsaJI	CCNNGG	5 cut(s)	584, 721, 1855, 1889, 2579
Bsc4I	CCNNNNNNNGG	5 cut(s)	484, 834, 2246, 2681, 2780
Bse118I	RCCGGY	4 cut(s)	608, 1151, 1223, 1796
Bse1I	ACTGG	5 cut(s)	1084, 1104, 1360, 2758, 2810
Bse21I	CCTNAGG	1 cut(s)	2868
BseAI	TCCGGA	1 cut(s)	2932
BseBI	CCWGG	2 cut(s)	479, 770
BseCI	ATCGAT	1 cut(s)	333
BseDI	CCNNGG	5 cut(s)	584, 721, 1855, 1889, 2579
BseGI	GGATG	5 cut(s)	717, 1751, 2053, 2089, 2774
BseLI	CCNNNNNNNGG	5 cut(s)	484, 834, 2246, 2681, 2780
BseMII	CTCAG	8 cut(s)	614, 947, 1106, 1613, 1748, 1962, 2286, 2859
BseNI	ACTGG	5 cut(s)	1084, 1104, 1360, 2758, 2810
BseRI	GAGGAG	5 cut(s)	68, 131, 149, 247, 250
BseSI	GKGCMC	2 cut(s)	1256, 1958
BsgI	GTGCAG	2 cut(s)	445, 2405
BshFI	GGCC	3 cut(s)	1238, 2214, 2873
BshNI	GGYRCC	1 cut(s)	1799
BshTI	ACCGGT	4 cut(s)	608, 1151, 1223, 1796
BshVI	ATCGAT	1 cut(s)	333
BsiHKAI	GWGCWC	6 cut(s)	762, 849, 1256, 1898, 2234, 2315
BsiHKCI	CYCGRG	4 cut(s)	689, 905, 1855, 2368
BslFI	GGGAC	8 cut(s)	266, 448, 497, 1198, 1356, 1550, 1872, 2465
BslI	CCNNNNNNNGG	5 cut(s)	484, 834, 2246, 2681, 2780
BsmAI	GTCTC	5 cut(s)	36, 366, 1460, 1716, 1753
BsmFI	GGGAC	8 cut(s)	266, 448, 497, 1198, 1356, 1550, 1872, 2465
BsmI	GAATGC	1 cut(s)	42
BsnI	GGCC	3 cut(s)	1238, 2214, 2873
Bso31I	GGTCTC	1 cut(s)	366
BsoBI	CYCGRG	4 cut(s)	689, 905, 1855, 2368
Bsp119I	TTCGAA	2 cut(s)	1355, 2273
Bsp1286I	GDGCHC	7 cut(s)	762, 849, 1256, 1898, 1958, 2234, 2315
Bsp13I	TCCGGA	1 cut(s)	2932
BspACI	CCGC	3 cut(s)	171, 174, 267
BspANI	GGCC	3 cut(s)	1238, 2214, 2873
BspCNI	CTCAG	8 cut(s)	615, 948, 1105, 1614, 1749, 1961, 2287, 2860
BspDI	ATCGAT	1 cut(s)	333
BspEI	TCCGGA	1 cut(s)	2932
BspLI	GGNNCC	4 cut(s)	418, 1305, 1372, 1801
BspMAI	CTGCAG	3 cut(s)	716, 987, 2351
BspMI	ACCTGC	1 cut(s)	311
BspPI	GGATC	6 cut(s)	584, 641, 1111, 2198, 2421, 2765
BspQI	GCTCTTC	1 cut(s)	2222
BspT104I	TTCGAA	2 cut(s)	1355, 2273
BspT107I	GGYRCC	1 cut(s)	1799
BspTNI	GGTCTC	1 cut(s)	366
BsrFI	RCCGGY	4 cut(s)	608, 1151, 1223, 1796
BsrI	ACTGG	5 cut(s)	1084, 1104, 1360, 2758, 2810
BssAI	RCCGGY	4 cut(s)	608, 1151, 1223, 1796
BssECI	CCNNGG	5 cut(s)	584, 721, 1855, 1889, 2579
BssNI	GRCGYC	2 cut(s)	312, 918
BssT1I	CCWWGG	1 cut(s)	721
Bst2UI	CCWGG	2 cut(s)	479, 770
Bst4CI	ACNGT	4 cut(s)	1067, 1893, 2024, 2663
Bst6I	CTCTTC	4 cut(s)	149, 245, 2222, 2877
BstACI	GRCGYC	2 cut(s)	312, 918
BstBI	TTCGAA	2 cut(s)	1355, 2273
BstC8I	GCNNGC	4 cut(s)	408, 1407, 1898, 2601
BstDSI	CCRYGG	2 cut(s)	584, 1889
BstEII	GGTNACC	1 cut(s)	1850
BstF5I	GGATG	5 cut(s)	717, 1751, 2053, 2089, 2774
BstHHI	GCGC	1 cut(s)	1411
BstMAI	GTCTC	5 cut(s)	36, 366, 1460, 1716, 1753
BstNI	CCWGG	2 cut(s)	479, 770
BstNSI	RCATGY	5 cut(s)	499, 1174, 1771, 2327, 2428
BstPI	GGTNACC	1 cut(s)	1850
BstSFI	CTRYAG	5 cut(s)	712, 983, 1864, 2347, 2875
BstSLI	GKGCMC	2 cut(s)	1256, 1958
BstV2I	GAAGAC	2 cut(s)	145, 1575
BstX2I	RGATCY	2 cut(s)	576, 2770
BstYI	RGATCY	2 cut(s)	576, 2770
Bsu15I	ATCGAT	1 cut(s)	333
Bsu36I	CCTNAGG	1 cut(s)	2868
BsuRI	GGCC	3 cut(s)	1238, 2214, 2873
BsuTUI	ATCGAT	1 cut(s)	333
BtgI	CCRYGG	2 cut(s)	584, 1889
BtgZI	GCGATG	1 cut(s)	2727
BtrI	CACGTC	1 cut(s)	1132
BtsCI	GGATG	5 cut(s)	717, 1751, 2053, 2089, 2774
BtsI	GCAGTG	1 cut(s)	2272
BtsIMutI	CAGTG	4 cut(s)	1956, 2083, 2199, 2272
BveI	ACCTGC	1 cut(s)	311
Cac8I	GCNNGC	4 cut(s)	408, 1407, 1898, 2601
CaiI	CAGNNNCTG	2 cut(s)	515, 1099
CfoI	GCGC	1 cut(s)	1411
Cfr10I	RCCGGY	4 cut(s)	608, 1151, 1223, 1796
Cfr13I	GGNCC	3 cut(s)	417, 1110, 1370
Cfr9I	CCCGGG	1 cut(s)	1855
ClaI	ATCGAT	1 cut(s)	333
CseI	GACGC	3 cut(s)	301, 926, 1201
Csp6I	GTAC	7 cut(s)	1155, 1554, 2389, 2461, 2735, 2860, 3047
CspAI	ACCGGT	4 cut(s)	608, 1151, 1223, 1796
CviQI	GTAC	7 cut(s)	1155, 1554, 2389, 2461, 2735, 2860, 3047
EaeI	YGGCCR	2 cut(s)	1236, 2212
Eam1104I	CTCTTC	4 cut(s)	149, 245, 2222, 2877
EarI	CTCTTC	4 cut(s)	149, 245, 2222, 2877
Ecl136II	GAGCTC	4 cut(s)	760, 847, 2232, 2313
Eco130I	CCWWGG	1 cut(s)	721
Eco147I	AGGCCT	1 cut(s)	2873
Eco24I	GRGCYC	4 cut(s)	762, 849, 2234, 2315
Eco31I	GGTCTC	1 cut(s)	366
Eco32I	GATATC	2 cut(s)	1387, 1876
Eco47I	GGWCC	3 cut(s)	417, 1110, 1370
Eco53kI	GAGCTC	4 cut(s)	760, 847, 2232, 2313
Eco57I	CTGAAG	3 cut(s)	1193, 2059, 2843
Eco81I	CCTNAGG	1 cut(s)	2868
Eco88I	CYCGRG	4 cut(s)	689, 905, 1855, 2368
Eco91I	GGTNACC	1 cut(s)	1850
EcoICRI	GAGCTC	4 cut(s)	760, 847, 2232, 2313
EcoO109I	RGGNCCY	1 cut(s)	1370
EcoO65I	GGTNACC	1 cut(s)	1850
EcoRI	GAATTC	3 cut(s)	1034, 1696, 2285
EcoRII	CCWGG	2 cut(s)	477, 768
EcoRV	GATATC	2 cut(s)	1387, 1876
EcoT14I	CCWWGG	1 cut(s)	721
EcoT38I	GRGCYC	4 cut(s)	762, 849, 2234, 2315
ErhI	CCWWGG	1 cut(s)	721
FalI	AAGNNNNNCTT	2 cut(s)	2142, 2174
FaqI	GGGAC	8 cut(s)	266, 448, 497, 1198, 1356, 1550, 1872, 2465
FauNDI	CATATG	2 cut(s)	380, 2192
FblI	GTMKAC	3 cut(s)	2145, 2254, 2382
FokI	GGATG	5 cut(s)	704, 1738, 2060, 2096, 2761
FriOI	GRGCYC	4 cut(s)	762, 849, 2234, 2315
FspBI	CTAG	9 cut(s)	326, 651, 1748, 2358, 2522, 2747, 2925, 3002, 3030
FspI	TGCGCA	1 cut(s)	1410
GlaI	GCGC	1 cut(s)	1410
GsuI	CTGGAG	1 cut(s)	863
HaeIII	GGCC	3 cut(s)	1238, 2214, 2873
HgaI	GACGC	3 cut(s)	301, 926, 1201
HhaI	GCGC	1 cut(s)	1411
Hin1I	GRCGYC	2 cut(s)	312, 918
Hin6I	GCGC	1 cut(s)	1409
HinP1I	GCGC	1 cut(s)	1409
HincII	GTYRAC	4 cut(s)	91, 1221, 1263, 1279
HindII	GTYRAC	4 cut(s)	91, 1221, 1263, 1279
HindIII	AAGCTT	4 cut(s)	872, 1403, 2404, 2441
Hpy99I	CGWCG	4 cut(s)	185, 920, 1133, 1922
HpyCH4III	ACNGT	4 cut(s)	1067, 1893, 2024, 2663
HpyCH4IV	ACGT	3 cut(s)	1131, 1259, 1332
HpySE526I	ACGT	3 cut(s)	1131, 1259, 1332
Hsp92I	GRCGYC	2 cut(s)	312, 918
HspAI	GCGC	1 cut(s)	1409
Kpn2I	TCCGGA	1 cut(s)	2932
LguI	GCTCTTC	1 cut(s)	2222
LmnI	GCTCC	8 cut(s)	290, 844, 2237, 2259, 2477, 2677, 2743, 2935
LweI	GCATC	5 cut(s)	553, 726, 1760, 2232, 2281
MaeI	CTAG	9 cut(s)	326, 651, 1748, 2358, 2522, 2747, 2925, 3002, 3030
MaeII	ACGT	3 cut(s)	1131, 1259, 1332
MfeI	CAATTG	1 cut(s)	1547
MflI	RGATCY	2 cut(s)	576, 2770
MhlI	GDGCHC	7 cut(s)	762, 849, 1256, 1898, 1958, 2234, 2315
MmeI	TCCRAC	8 cut(s)	252, 351, 366, 378, 444, 1116, 1941, 2455
MroI	TCCGGA	1 cut(s)	2932
MroXI	GAANNNNTTC	1 cut(s)	2342
MseI	TTAA	3 cut(s)	6, 681, 1997
MslI	CAYNNNNRTG	8 cut(s)	101, 602, 1130, 2240, 2328, 2427, 2511, 2535
MspA1I	CMGCKG	2 cut(s)	841, 1198
MunI	CAATTG	1 cut(s)	1547
Mva1269I	GAATGC	1 cut(s)	42
MvaI	CCWGG	2 cut(s)	479, 770
NciI	CCSGG	8 cut(s)	574, 806, 925, 1513, 1739, 1856, 1857, 2581
NdeI	CATATG	2 cut(s)	380, 2192
NlaIV	GGNNCC	4 cut(s)	418, 1305, 1372, 1801
NmuCI	GTSAC	6 cut(s)	632, 1333, 1625, 2749, 2783, 2813
NsbI	TGCGCA	1 cut(s)	1410
NspI	RCATGY	5 cut(s)	499, 1174, 1771, 2327, 2428
NspV	TTCGAA	2 cut(s)	1355, 2273
OliI	CACNNNNGTG	1 cut(s)	2427
PaeR7I	CTCGAG	3 cut(s)	689, 905, 2368
PceI	AGGCCT	1 cut(s)	2873
PciI	ACATGT	3 cut(s)	495, 1170, 2424
PciSI	GCTCTTC	1 cut(s)	2222
PcsI	WCGNNNNNNNCGW	1 cut(s)	912
PctI	GAATGC	1 cut(s)	42
PdmI	GAANNNNTTC	1 cut(s)	2342
PflFI	GACNNNGTC	1 cut(s)	1922
PflMI	CCANNNNNTGG	2 cut(s)	834, 2780
PfoI	TCCNGGA	4 cut(s)	572, 923, 1511, 1737
PinAI	ACCGGT	4 cut(s)	608, 1151, 1223, 1796
PpuMI	RGGWCCY	1 cut(s)	1370
PscI	ACATGT	3 cut(s)	495, 1170, 2424
Psp124BI	GAGCTC	4 cut(s)	762, 849, 2234, 2315
Psp1406I	AACGTT	1 cut(s)	1259
Psp5II	RGGWCCY	1 cut(s)	1370
Psp6I	CCWGG	2 cut(s)	477, 768
PspEI	GGTNACC	1 cut(s)	1850
PspGI	CCWGG	2 cut(s)	477, 768
PspN4I	GGNNCC	4 cut(s)	418, 1305, 1372, 1801
PspPI	GGNCC	3 cut(s)	417, 1110, 1370
PspPPI	RGGWCCY	1 cut(s)	1370
PspXI	VCTCGAGB	2 cut(s)	689, 2368
PstI	CTGCAG	3 cut(s)	716, 987, 2351
PstNI	CAGNNNCTG	2 cut(s)	515, 1099
PsuI	RGATCY	2 cut(s)	576, 2770
PsyI	GACNNNGTC	1 cut(s)	1922
PvuII	CAGCTG	2 cut(s)	841, 1198
RsaI	GTAC	7 cut(s)	1156, 1555, 2390, 2462, 2736, 2861, 3048
RsaNI	GTAC	7 cut(s)	1155, 1554, 2389, 2461, 2735, 2860, 3047
RseI	CAYNNNNRTG	8 cut(s)	101, 602, 1130, 2240, 2328, 2427, 2511, 2535
SacI	GAGCTC	4 cut(s)	762, 849, 2234, 2315
SapI	GCTCTTC	1 cut(s)	2222
SaqAI	TTAA	3 cut(s)	6, 681, 1997
Sau96I	GGNCC	3 cut(s)	417, 1110, 1370
ScaI	AGTACT	3 cut(s)	1555, 2390, 2736
SduI	GDGCHC	7 cut(s)	762, 849, 1256, 1898, 1958, 2234, 2315
SfaNI	GCATC	5 cut(s)	553, 726, 1760, 2232, 2281
SfcI	CTRYAG	5 cut(s)	712, 983, 1864, 2347, 2875
Sfr274I	CTCGAG	3 cut(s)	689, 905, 2368
SfuI	TTCGAA	2 cut(s)	1355, 2273
SinI	GGWCC	3 cut(s)	417, 1110, 1370
SlaI	CTCGAG	3 cut(s)	689, 905, 2368
SmaI	CCCGGG	1 cut(s)	1857
SmiMI	CAYNNNNRTG	8 cut(s)	101, 602, 1130, 2240, 2328, 2427, 2511, 2535
SmlI	CTYRAG	6 cut(s)	451, 539, 689, 905, 2106, 2368
SmoI	CTYRAG	6 cut(s)	451, 539, 689, 905, 2106, 2368
SpeI	ACTAGT	1 cut(s)	2357
SseBI	AGGCCT	1 cut(s)	2873
SsiI	CCGC	3 cut(s)	171, 174, 267
SspI	AATATT	1 cut(s)	1965
SspMI	CTAG	9 cut(s)	326, 651, 1748, 2358, 2522, 2747, 2925, 3002, 3030
SstI	GAGCTC	4 cut(s)	762, 849, 2234, 2315
StuI	AGGCCT	1 cut(s)	2873
StyI	CCWWGG	1 cut(s)	721
TaaI	ACNGT	4 cut(s)	1067, 1893, 2024, 2663
TaiI	ACGT	3 cut(s)	1134, 1262, 1335
TatI	WGTACW	4 cut(s)	1553, 2388, 2734, 3046
TauI	GCSGC	2 cut(s)	173, 176
Tru1I	TTAA	3 cut(s)	6, 681, 1997
Tru9I	TTAA	3 cut(s)	6, 681, 1997
TscAI	CASTG	4 cut(s)	1956, 2083, 2206, 2272
TseFI	GTSAC	6 cut(s)	632, 1333, 1625, 2749, 2783, 2813
Tsp45I	GTSAC	6 cut(s)	632, 1333, 1625, 2749, 2783, 2813
TspDTI	ATGAA	8 cut(s)	539, 1114, 1133, 2016, 2453, 2519, 2718, 3008
TspGWI	ACGGA	4 cut(s)	76, 310, 458, 2272
TspMI	CCCGGG	1 cut(s)	1855
TspRI	CASTG	4 cut(s)	1956, 2083, 2206, 2272
Tth111I	GACNNNGTC	1 cut(s)	1922
Van91I	CCANNNNNTGG	2 cut(s)	834, 2780
VneI	GTGCAC	1 cut(s)	1252
VpaK11BI	GGWCC	3 cut(s)	417, 1110, 1370
XapI	RAATTY	7 cut(s)	970, 1025, 1034, 1141, 1662, 1696, 2285
XceI	RCATGY	5 cut(s)	499, 1174, 1771, 2327, 2428
XhoI	CTCGAG	3 cut(s)	689, 905, 2368
XmaI	CCCGGG	1 cut(s)	1855
XmiI	GTMKAC	3 cut(s)	2145, 2254, 2382
XmnI	GAANNNNTTC	1 cut(s)	2342
XspI	CTAG	9 cut(s)	326, 651, 1748, 2358, 2522, 2747, 2925, 3002, 3030
ZrmI	AGTACT	3 cut(s)	1555, 2390, 2736

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.