Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004091

Physical Location & Seq

Genomic Coordinates Forward (+)

35197812 .. 35200983

Gene Structure 3172 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ19449

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGCCATTACCCAAAAACCACCACCTCCATCTCCACCTCCTCTTCTTCCTCTTCCTCTTCCTCCTCTCCAACGCCGTCGCAGCAGACGAGCTTCAAATCCTACTAAAACTCAAATCCTCCCTCCAAGACTCCAACGCCCAACTCTTCGCCACATGGGACTCCACCGCCAATTCGTTTTGCACCTTCACCGGAATCACCTGCAACAACGTCGGTTCGGTTCGAGAAATCGATCTTTCGCACCAGAAGCTGTCGGGGTCTCTTCCGTTGGACTCGATATGCCAACTTCCATCATTAGAAAAGCTCGCTTTCGGGTCCAATTTCCTGCACGGGACAATCACGGAGGACTTGAGAAACTGTACGAATTTGAAGTACCTGGATTTGGGGAACAACTTGTTCGCGGGTTCATTCCCTGACATATCTTCCTTGTCCCAACTGGAGCATCTTCATTTAAACCACAGCGTGTTTTCGGGGATTTTCCCGTGGACTTGCCTCACCAACATGACTGGTCTGATTCGTTTGAGCTTGGGTGACAACCCGTTTGATCCGAGCCCGTTTCCAAAGGAAGTAGTAACTCTTAAGAAGCTCGAGTGGCTCTACTTATCAAACTGCAGCATCCAAGGAACGATACCAAGCGAAATCGGGAACTTGGTCGAGCTTATCAACCTGGAGCTGTCAGGTAACAACATGCCCGGAGAAATTCCGGCCGAGATTGGACAGCTCACCAAGCTCTGGCAGCTGGAGCTCTACGCCAACAGGTTCACCGGAAAACTTCCTTTCGGGCTAAGAAACCTCATCAATCTCGAGAACTTCGATGCTTCCACGAATTTTCTAGAAGGCGATTTGAACGAGTTGGGGTTTCTGACCAATTTGGTTTCTCTGCAGCTGTCTAAGAACAATTTTTCAGGCAATGTACCGGAAGAATTCGGCGAGTTCAAGAAGCTTGTGAGTCTGTGTTTGTACGCTAACAAGCTGACCGGTCCTCTGCCTCAGAAATTGGGGTCTTGGTCGAAGATGGACTACATCGATGTGTCGGAGAATTTCTTGACCGGGACTATTCCGCCGGACATGTGCAACAAAGGGACGATGAAGAAGCTGCTCATGCTTCAGAACAAGTTGACCGGCGAAATTCCGGCAAACTACGCGAAGTGCACGACGCTGACCCGGTTCAGGGTCAACAACAACTCCCTCTCCGGTGTAGTTCCGGCTGGACTTTGGGGATTGCCGAATGTGGCAATCATTGACATCACTTTGAATCAAATTGAAGGTCCGATTACTTCCGATATCGGAAACGCCAAGAAGCTTGCGCAGTTGTTTGTGAGTTACAATCGGTTATCTGGTGAATTACCGGACGAGCTTTCGAAGTCAACTTCGTTGGTTTCGGTTGTGTTGAATAACAATCAGTTTTCCGGTAAGATTCCGGCGAAGATAGGGGACTTGAAGCAATTGAGTACCCTGTATTTACAGAGCAACTTGTTGTCTTCTTCAATTCCCAAGTCATTAGGAAGCTGTAGTTACCTGAGTGACTTGAACATGGCAAACAACTCGCTTTCCGGTAAAATCCCGTCATCTTTGGGCTCTTTGCCTACCTTGAATTCTTTGGATTTGTCTCACAATCAACTCTCCGGTAAAATCCCGGAAAGTCTGGCATCTCTGAGACTAAGCATGCTTGATCTTTCGCATAACAGACTGACCGGTGCCGTACCGGAATCTCTCTCGATTACAGCCTACAACGGCAGCCTTTCCGGTAACCCGGGTCTCTGCAGCATGGACATCACCTACTTCCCACGGTGCTCGCCAGAAAAGGAAATGTCCAACGATGTCAGGACACTCATTATTTGCTTCTCAGTGGGTACAGCAATTTTGTTTGTTTCACTCATTTGCTTCTTGCTCTTAAAGAGGAAGGAGAAAGATCAAGACCGTTCATTGAAGGAAGAATCTTGGGATGTAAAGTCTTTCCATGTAATAACCTTCAGTGAGGATGAGATTCTTGATTCCATTACTCAAGAGAATCTAATTGGAAAAGGAGGTTCTGGAGATGTCTACAAAGTGTCACTAGCCAATGGCAAAGAACTCGCCGTGAAGCACATATGGAACACTGATTCAAGCGGCCGGAAAATGTTCAAGAGCACCACACCGATGCGAGGGAGACGGGGCAGTGGTAGTTCGAAATCGAAGGAATTTGATGCTGAGGTGCAGACGTTGAGCTCAATAAGGCATGTGAATGTGGTGAAGCTGTTCTGCAGCATTACTAGTGAGGACTCGAGCCTTTTGGTCTACGAGTACTTACCGAATGGAAGCTTGTGGGATCGGCTGCACATGTGTGAGAAAACGAAGCTTGATTGGGACGCAAGGTATGAGATTGCAGTCGGAGCAGCCAAAGGGTTGGGGTATCTGCACCATGGCTGTGAGAGGCTAGTGATTCATAGAGATGTCAAGTCCAGTAACATTTTGTTAGACGAGTCTTTGAAGCCCCGGATTGCGGATTTTGGGCTTGCCAAGATGGTTCAGCCTAATGCAATCAAGGACTCGACTCATGTTGTTGCTGGAACACACGGTTACATAGCTCCTGAATATGGTTACACCTACAAGGTGAATGAGAAGAGCGATGTGTATAGCTTCGGTGTAGTACTAATGGAGCTAGTGACCGGGAAAAACCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001653 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009845 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090351 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

886

Amino Acids

97.61

Weight (kDa)

6.39

Isoelectric Point (pI)

30.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	28 - 68	3.1e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	187 - 324	2e-12	Leucine-rich repeat region
LRR_8	PF13855	506 - 563	3.1e-07	Leucine rich repeat
Pkinase	PF00069	668 - 884	9.2e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	670 - 883	3e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09970 AT1G09970
fragaria_vesca	FvH4_5g33590
malus_domestica	MD08G1210000.v1.1 MD15G1394100.v1.1
prunus_persica	Prupe.1G542300_v2.0.a1
pyrus_communis	pycom08g18120 pycom15g35400 pycom15g35410
rosa_chinensis	RchiOBHm_Chr7g0217331 RchiOBHm_Chr7g0232471
rosa_laevigata	RLG00000001335 RLG00000002489 RLG00000002493
rosa_multiflora	Rmu_sc0001898.1_g000015 Rmu_sc0004663.1_g000011 Rmu_sc0011824.1_g000016
rosa_roxburghii	Rroxscaffold_3G00228280 Rroxscaffold_3G00242430
rosa_rugosa	Rorug07G0168100 Rorug07G0274700
rosa_samantha	Rh7AG307400 Rh7AG307800 Rh7AG428100 Rh7BG298200 Rh7BG402600 Rh7CG326500 Rh7CG326900 Rh7CG447100 Rh7DG306900 Rh7DG418900
rosa_wichuraiana	Rw7G026090 Rw7G035470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	206
Acc16I	TGCGCA	1 cut(s)	1305
Acc36I	ACCTGC	1 cut(s)	206
AccB1I	GGYRCC	1 cut(s)	1694
AccB7I	CCANNNNNTGG	1 cut(s)	729
AccI	GTMKAC	2 cut(s)	2040, 2274
AccII	CGCG	2 cut(s)	398, 1142
AciI	CCGC	5 cut(s)	165, 398, 1058, 2106, 2480
AclWI	GGATC	2 cut(s)	536, 2313
AcoI	YGGCCR	2 cut(s)	702, 2107
AcsI	RAATTY	8 cut(s)	361, 696, 823, 920, 1036, 1125, 1591, 2177
AcuI	CTGAAG	2 cut(s)	1088, 1954
AdeI	CACNNNGTG	1 cut(s)	460
AfaI	GTAC	9 cut(s)	358, 371, 912, 959, 1450, 1701, 1852, 2282, 2628
AfiI	CCNNNNNNNGG	7 cut(s)	379, 729, 1167, 1168, 2141, 2479, 2573
AflII	CTTAAG	1 cut(s)	575
AflIII	ACRYGT	2 cut(s)	1065, 2316
AgeI	ACCGGT	2 cut(s)	974, 1691
AhlI	ACTAGT	1 cut(s)	2249
AjnI	CCWGG	2 cut(s)	372, 663
AleI	CACNNNNGTG	1 cut(s)	2319
Alw21I	GWGCWC	5 cut(s)	744, 1151, 1793, 2129, 2207
Alw26I	GTCTC	5 cut(s)	261, 1611, 1648, 1760, 2140
Alw44I	GTGCAC	1 cut(s)	1147
AlwI	GGATC	2 cut(s)	536, 2313
AlwNI	CAGNNNCTG	1 cut(s)	247
Ama87I	CYCGRG	4 cut(s)	584, 800, 1750, 2260
AoxI	GGCC	2 cut(s)	702, 2107
ApaLI	GTGCAC	1 cut(s)	1147
ApoI	RAATTY	8 cut(s)	361, 696, 823, 920, 1036, 1125, 1591, 2177
ArsI	GACNNNNNNTTYG	4 cut(s)	521, 553, 1249, 1281
AsiGI	ACCGGT	2 cut(s)	974, 1691
Asp700I	GAANNNNTTC	2 cut(s)	2117, 2234
AspLEI	GCGC	1 cut(s)	1306
AspS9I	GGNCC	3 cut(s)	312, 977, 1265
AsuC2I	CCSGG	8 cut(s)	690, 1048, 1162, 1634, 1751, 1752, 2473, 2647
AsuII	TTCGAA	2 cut(s)	1358, 2165
AvaI	CYCGRG	4 cut(s)	584, 800, 1750, 2260
AvaII	GGWCC	3 cut(s)	312, 977, 1265
BaeGI	GKGCMC	1 cut(s)	1151
BanI	GGYRCC	1 cut(s)	1694
BanII	GRGCYC	4 cut(s)	551, 744, 1577, 2207
BarI	GAAGNNNNNNTAC	2 cut(s)	1001, 1033
BbsI	GAAGAC	1 cut(s)	1470
Bbv12I	GWGCWC	5 cut(s)	744, 1151, 1793, 2129, 2207
BbvCI	CCTCAGC	1 cut(s)	2187
BccI	CCATC	4 cut(s)	36, 295, 1006, 2494
BceAI	ACGGC	4 cut(s)	59, 1682, 1747, 2060
BcgI	CGANNNNNNTGC	6 cut(s)	190, 224, 1524, 1558, 2053, 2087
BciT130I	CCWGG	2 cut(s)	374, 665
BcnI	CCSGG	8 cut(s)	690, 1048, 1162, 1634, 1751, 1752, 2473, 2647
BcoDI	GTCTC	5 cut(s)	261, 1611, 1648, 1760, 2140
BcuI	ACTAGT	1 cut(s)	2249
BfaI	CTAG	5 cut(s)	830, 2054, 2250, 2414, 2639
BfmI	CTRYAG	5 cut(s)	607, 878, 1507, 1759, 2239
BfrI	CTTAAG	1 cut(s)	575
BfuAI	ACCTGC	1 cut(s)	206
BmcAI	AGTACT	2 cut(s)	2282, 2628
Bme18I	GGWCC	3 cut(s)	312, 977, 1265
BmeT110I	CYCGRG	4 cut(s)	584, 800, 1750, 2260
BmgT120I	GGNCC	3 cut(s)	312, 977, 1265
BmiI	GGNNCC	2 cut(s)	313, 1696
BmsI	GCATC	6 cut(s)	448, 621, 802, 1655, 2127, 2173
BpiI	GAAGAC	1 cut(s)	1470
BpmI	CTGGAG	4 cut(s)	455, 686, 758, 2052
Bpu10I	CCTNAGC	1 cut(s)	2187
Bpu14I	TTCGAA	2 cut(s)	1358, 2165
BpuEI	CTTGAG	2 cut(s)	367, 1986
BpuMI	CCSGG	8 cut(s)	690, 1048, 1162, 1634, 1751, 1752, 2473, 2647
Bsa29I	ATCGAT	2 cut(s)	228, 1023
BsaI	GGTCTC	2 cut(s)	261, 1760
BsaJI	CCNNGG	6 cut(s)	479, 616, 1750, 1784, 2398, 2471
BsaXI	ACNNNNNCTCC	4 cut(s)	1166, 1172, 1196, 1202
Bsc4I	CCNNNNNNNGG	7 cut(s)	379, 729, 1167, 1168, 2141, 2479, 2573
Bse118I	RCCGGY	3 cut(s)	974, 1118, 1691
Bse1I	ACTGG	3 cut(s)	438, 508, 2439
Bse3DI	GCAATG	1 cut(s)	913
BseBI	CCWGG	2 cut(s)	374, 665
BseCI	ATCGAT	2 cut(s)	228, 1023
BseDI	CCNNGG	6 cut(s)	479, 616, 1750, 1784, 2398, 2471
BseGI	GGATG	3 cut(s)	612, 1948, 1984
BseLI	CCNNNNNNNGG	7 cut(s)	379, 729, 1167, 1168, 2141, 2479, 2573
BseMI	GCAATG	1 cut(s)	913
BseMII	CTCAG	5 cut(s)	1001, 1508, 1643, 1857, 2178
BseNI	ACTGG	3 cut(s)	438, 508, 2439
BseRI	GAGGAG	2 cut(s)	29, 53
BseSI	GKGCMC	1 cut(s)	1151
BseX3I	CGGCCG	2 cut(s)	702, 2107
BsgI	GTGCAG	4 cut(s)	308, 2213, 2297, 2378
Bsh1236I	CGCG	2 cut(s)	398, 1142
Bsh1285I	CGRYCG	2 cut(s)	705, 2110
BshFI	GGCC	2 cut(s)	704, 2109
BshNI	GGYRCC	1 cut(s)	1694
BshTI	ACCGGT	2 cut(s)	974, 1691
BshVI	ATCGAT	2 cut(s)	228, 1023
BsiEI	CGRYCG	2 cut(s)	705, 2110
BsiHKAI	GWGCWC	5 cut(s)	744, 1151, 1793, 2129, 2207
BsiHKCI	CYCGRG	4 cut(s)	584, 800, 1750, 2260
BslFI	GGGAC	7 cut(s)	170, 343, 412, 1063, 1093, 1445, 2357
BslI	CCNNNNNNNGG	7 cut(s)	379, 729, 1167, 1168, 2141, 2479, 2573
BsmAI	GTCTC	5 cut(s)	261, 1611, 1648, 1760, 2140
BsmBI	CGTCTC	1 cut(s)	2140
BsmFI	GGGAC	7 cut(s)	170, 343, 412, 1063, 1093, 1445, 2357
BsnI	GGCC	2 cut(s)	704, 2109
Bso31I	GGTCTC	2 cut(s)	261, 1760
BsoBI	CYCGRG	4 cut(s)	584, 800, 1750, 2260
Bsp119I	TTCGAA	2 cut(s)	1358, 2165
Bsp1286I	GDGCHC	7 cut(s)	551, 744, 1151, 1577, 1793, 2129, 2207
Bsp143I	GATC	5 cut(s)	229, 541, 1669, 1909, 2305
Bsp19I	CCATGG	1 cut(s)	2398
BspACI	CCGC	5 cut(s)	165, 398, 1058, 2106, 2480
BspANI	GGCC	2 cut(s)	704, 2109
BspCNI	CTCAG	5 cut(s)	1000, 1509, 1644, 1856, 2179
BspDI	ATCGAT	2 cut(s)	228, 1023
BspFNI	CGCG	2 cut(s)	398, 1142
BspLI	GGNNCC	2 cut(s)	313, 1696
BspMAI	CTGCAG	4 cut(s)	611, 882, 1763, 2243
BspMI	ACCTGC	1 cut(s)	206
BspPI	GGATC	2 cut(s)	536, 2313
BspQI	GCTCTTC	1 cut(s)	2594
BspT104I	TTCGAA	2 cut(s)	1358, 2165
BspT107I	GGYRCC	1 cut(s)	1694
BspTI	CTTAAG	1 cut(s)	575
BspTNI	GGTCTC	2 cut(s)	261, 1760
BsrDI	GCAATG	1 cut(s)	913
BsrFI	RCCGGY	3 cut(s)	974, 1118, 1691
BsrI	ACTGG	3 cut(s)	438, 508, 2439
BssAI	RCCGGY	3 cut(s)	974, 1118, 1691
BssECI	CCNNGG	6 cut(s)	479, 616, 1750, 1784, 2398, 2471
BssMI	GATC	5 cut(s)	229, 541, 1669, 1909, 2305
BssT1I	CCWWGG	2 cut(s)	616, 2398
Bst2UI	CCWGG	2 cut(s)	374, 665
Bst4CI	ACNGT	4 cut(s)	356, 1788, 1919, 2555
Bst6I	CTCTTC	6 cut(s)	47, 56, 62, 149, 264, 2594
BstAFI	CTTAAG	1 cut(s)	575
BstBI	TTCGAA	2 cut(s)	1358, 2165
BstC8I	GCNNGC	5 cut(s)	303, 1302, 1664, 1793, 2493
BstDEI	CTNAG	8 cut(s)	782, 888, 987, 1517, 1652, 1658, 1843, 2187
BstDSI	CCRYGG	3 cut(s)	479, 1784, 2398
BstEII	GGTNACC	1 cut(s)	1745
BstF5I	GGATG	3 cut(s)	612, 1948, 1984
BstFNI	CGCG	2 cut(s)	398, 1142
BstHHI	GCGC	1 cut(s)	1306
BstKTI	GATC	5 cut(s)	232, 544, 1672, 1912, 2308
BstMAI	GTCTC	5 cut(s)	261, 1611, 1648, 1760, 2140
BstMBI	GATC	5 cut(s)	229, 541, 1669, 1909, 2305
BstMCI	CGRYCG	2 cut(s)	705, 2110
BstMWI	GCNNNNNNNGC	9 cut(s)	80, 244, 589, 724, 733, 739, 1099, 1139, 2369
BstNI	CCWGG	2 cut(s)	374, 665
BstNSI	RCATGY	5 cut(s)	688, 1069, 1666, 2219, 2320
BstPI	GGTNACC	1 cut(s)	1745
BstSFI	CTRYAG	5 cut(s)	607, 878, 1507, 1759, 2239
BstSLI	GKGCMC	1 cut(s)	1151
BstUI	CGCG	2 cut(s)	398, 1142
BstV2I	GAAGAC	1 cut(s)	1470
BstXI	CCANNNNNNTGG	1 cut(s)	2383
BstZI	CGGCCG	2 cut(s)	702, 2107
Bsu15I	ATCGAT	2 cut(s)	228, 1023
BsuRI	GGCC	2 cut(s)	704, 2109
BsuTUI	ATCGAT	2 cut(s)	228, 1023
BtgI	CCRYGG	3 cut(s)	479, 1784, 2398
BtgZI	GCGATG	1 cut(s)	2619
BtsCI	GGATG	3 cut(s)	612, 1948, 1984
BtsI	GCAGTG	1 cut(s)	2161
BtsIMutI	CAGTG	4 cut(s)	1851, 1978, 2094, 2161
BveI	ACCTGC	1 cut(s)	206
Cac8I	GCNNGC	5 cut(s)	303, 1302, 1664, 1793, 2493
CaiI	CAGNNNCTG	1 cut(s)	247
CfoI	GCGC	1 cut(s)	1306
Cfr10I	RCCGGY	3 cut(s)	974, 1118, 1691
Cfr13I	GGNCC	3 cut(s)	312, 977, 1265
Cfr9I	CCCGGG	1 cut(s)	1750
ClaI	ATCGAT	2 cut(s)	228, 1023
CseI	GACGC	2 cut(s)	1162, 2354
Csp6I	GTAC	9 cut(s)	357, 370, 911, 958, 1449, 1700, 1851, 2281, 2627
CspAI	ACCGGT	2 cut(s)	974, 1691
CviQI	GTAC	9 cut(s)	357, 370, 911, 958, 1449, 1700, 1851, 2281, 2627
DdeI	CTNAG	8 cut(s)	782, 888, 987, 1517, 1652, 1658, 1843, 2187
DpnI	GATC	5 cut(s)	231, 543, 1671, 1911, 2307
DpnII	GATC	5 cut(s)	229, 541, 1669, 1909, 2305
DraI	TTTAAA	1 cut(s)	450
DraIII	CACNNNGTG	1 cut(s)	460
EaeI	YGGCCR	2 cut(s)	702, 2107
EagI	CGGCCG	2 cut(s)	702, 2107
Eam1104I	CTCTTC	6 cut(s)	47, 56, 62, 149, 264, 2594
EarI	CTCTTC	6 cut(s)	47, 56, 62, 149, 264, 2594
EciI	GGCGGA	1 cut(s)	1047
Ecl136II	GAGCTC	2 cut(s)	742, 2205
EclXI	CGGCCG	2 cut(s)	702, 2107
Eco130I	CCWWGG	2 cut(s)	616, 2398
Eco24I	GRGCYC	4 cut(s)	551, 744, 1577, 2207
Eco31I	GGTCTC	2 cut(s)	261, 1760
Eco32I	GATATC	1 cut(s)	1282
Eco47I	GGWCC	3 cut(s)	312, 977, 1265
Eco52I	CGGCCG	2 cut(s)	702, 2107
Eco53kI	GAGCTC	2 cut(s)	742, 2205
Eco57I	CTGAAG	2 cut(s)	1088, 1954
Eco88I	CYCGRG	4 cut(s)	584, 800, 1750, 2260
Eco91I	GGTNACC	1 cut(s)	1745
EcoICRI	GAGCTC	2 cut(s)	742, 2205
EcoO65I	GGTNACC	1 cut(s)	1745
EcoRI	GAATTC	2 cut(s)	920, 1591
EcoRII	CCWGG	2 cut(s)	372, 663
EcoRV	GATATC	1 cut(s)	1282
EcoT14I	CCWWGG	2 cut(s)	616, 2398
EcoT38I	GRGCYC	4 cut(s)	551, 744, 1577, 2207
ErhI	CCWWGG	2 cut(s)	616, 2398
Esp3I	CGTCTC	1 cut(s)	2140
FaqI	GGGAC	7 cut(s)	170, 343, 412, 1063, 1093, 1445, 2357
FauI	CCCGC	1 cut(s)	391
FauNDI	CATATG	1 cut(s)	2087
FblI	GTMKAC	2 cut(s)	2040, 2274
FokI	GGATG	3 cut(s)	599, 1955, 1991
FriOI	GRGCYC	4 cut(s)	551, 744, 1577, 2207
FspBI	CTAG	5 cut(s)	830, 2054, 2250, 2414, 2639
FspI	TGCGCA	1 cut(s)	1305
GlaI	GCGC	1 cut(s)	1305
GsuI	CTGGAG	4 cut(s)	455, 686, 758, 2052
HaeIII	GGCC	2 cut(s)	704, 2109
HgaI	GACGC	2 cut(s)	1162, 2354
HhaI	GCGC	1 cut(s)	1306
Hin6I	GCGC	1 cut(s)	1304
HinP1I	GCGC	1 cut(s)	1304
HincII	GTYRAC	3 cut(s)	1116, 1174, 1365
HindII	GTYRAC	3 cut(s)	1116, 1174, 1365
HindIII	AAGCTT	4 cut(s)	938, 1298, 2296, 2333
Hpy166II	GTNNAC	8 cut(s)	483, 759, 1116, 1149, 1174, 1365, 2041, 2275
Hpy8I	GTNNAC	8 cut(s)	483, 759, 1116, 1149, 1174, 1365, 2041, 2275
Hpy99I	CGWCG	3 cut(s)	80, 212, 1156
HpyAV	CCTTC	7 cut(s)	193, 827, 1256, 1894, 1921, 1978, 2167
HpyCH4III	ACNGT	4 cut(s)	356, 1788, 1919, 2555
HpyCH4IV	ACGT	2 cut(s)	207, 2198
HpyF10VI	GCNNNNNNNGC	9 cut(s)	80, 244, 589, 724, 733, 739, 1099, 1139, 2369
HpyF3I	CTNAG	8 cut(s)	782, 888, 987, 1517, 1652, 1658, 1843, 2187
HpySE526I	ACGT	2 cut(s)	207, 2198
HspAI	GCGC	1 cut(s)	1304
Kzo9I	GATC	5 cut(s)	229, 541, 1669, 1909, 2305
LguI	GCTCTTC	1 cut(s)	2594
LmnI	GCTCC	6 cut(s)	436, 667, 739, 2369, 2569, 2635
LweI	GCATC	6 cut(s)	448, 621, 802, 1655, 2127, 2173
MaeI	CTAG	5 cut(s)	830, 2054, 2250, 2414, 2639
MaeII	ACGT	2 cut(s)	207, 2198
MalI	GATC	5 cut(s)	231, 543, 1671, 1911, 2307
MboI	GATC	5 cut(s)	229, 541, 1669, 1909, 2305
MfeI	CAATTG	1 cut(s)	1442
MhlI	GDGCHC	7 cut(s)	551, 744, 1151, 1577, 1793, 2129, 2207
MlyI	GAGTC	8 cut(s)	122, 152, 263, 955, 2252, 2468, 2519, 2524
MmeI	TCCRAC	6 cut(s)	93, 156, 246, 1011, 1836, 2347
MroXI	GAANNNNTTC	2 cut(s)	2117, 2234
MseI	TTAA	3 cut(s)	449, 576, 1892
MslI	CAYNNNNRTG	7 cut(s)	497, 1025, 2135, 2220, 2319, 2403, 2427
MspA1I	CMGCKG	2 cut(s)	736, 883
MspCI	CTTAAG	1 cut(s)	575
MunI	CAATTG	1 cut(s)	1442
MvaI	CCWGG	2 cut(s)	374, 665
MvnI	CGCG	2 cut(s)	398, 1142
MwoI	GCNNNNNNNGC	9 cut(s)	80, 244, 589, 724, 733, 739, 1099, 1139, 2369
NciI	CCSGG	8 cut(s)	690, 1048, 1162, 1634, 1751, 1752, 2473, 2647
NcoI	CCATGG	1 cut(s)	2398
NdeI	CATATG	1 cut(s)	2087
NdeII	GATC	5 cut(s)	229, 541, 1669, 1909, 2305
NlaIV	GGNNCC	2 cut(s)	313, 1696
NmeAIII	GCCGAG	1 cut(s)	730
NmuCI	GTSAC	4 cut(s)	527, 1520, 2049, 2641
NsbI	TGCGCA	1 cut(s)	1305
NspI	RCATGY	5 cut(s)	688, 1069, 1666, 2219, 2320
NspV	TTCGAA	2 cut(s)	1358, 2165
OliI	CACNNNNGTG	1 cut(s)	2319
PaeI	GCATGC	1 cut(s)	1666
PaeR7I	CTCGAG	3 cut(s)	584, 800, 2260
PaqCI	CACCTGC	1 cut(s)	206
PciI	ACATGT	2 cut(s)	1065, 2316
PciSI	GCTCTTC	1 cut(s)	2594
PcsI	WCGNNNNNNNCGW	2 cut(s)	84, 807
PdmI	GAANNNNTTC	2 cut(s)	2117, 2234
PflMI	CCANNNNNTGG	1 cut(s)	729
PfoI	TCCNGGA	1 cut(s)	1632
PinAI	ACCGGT	2 cut(s)	974, 1691
PleI	GAGTC	8 cut(s)	122, 152, 263, 954, 2252, 2467, 2519, 2524
PpsI	GAGTC	8 cut(s)	122, 152, 263, 954, 2252, 2467, 2519, 2524
PscI	ACATGT	2 cut(s)	1065, 2316
Psp124BI	GAGCTC	2 cut(s)	744, 2207
Psp6I	CCWGG	2 cut(s)	372, 663
PspEI	GGTNACC	1 cut(s)	1745
PspGI	CCWGG	2 cut(s)	372, 663
PspN4I	GGNNCC	2 cut(s)	313, 1696
PspPI	GGNCC	3 cut(s)	312, 977, 1265
PspXI	VCTCGAGB	2 cut(s)	584, 2260
PstI	CTGCAG	4 cut(s)	611, 882, 1763, 2243
PstNI	CAGNNNCTG	1 cut(s)	247
PvuII	CAGCTG	2 cut(s)	736, 883
RsaI	GTAC	9 cut(s)	358, 371, 912, 959, 1450, 1701, 1852, 2282, 2628
RsaNI	GTAC	9 cut(s)	357, 370, 911, 958, 1449, 1700, 1851, 2281, 2627
RseI	CAYNNNNRTG	7 cut(s)	497, 1025, 2135, 2220, 2319, 2403, 2427
SacI	GAGCTC	2 cut(s)	744, 2207
SapI	GCTCTTC	1 cut(s)	2594
SaqAI	TTAA	3 cut(s)	449, 576, 1892
Sau3AI	GATC	5 cut(s)	229, 541, 1669, 1909, 2305
Sau96I	GGNCC	3 cut(s)	312, 977, 1265
ScaI	AGTACT	2 cut(s)	2282, 2628
SchI	GAGTC	8 cut(s)	122, 152, 263, 955, 2252, 2468, 2519, 2524
SduI	GDGCHC	7 cut(s)	551, 744, 1151, 1577, 1793, 2129, 2207
SfaNI	GCATC	6 cut(s)	448, 621, 802, 1655, 2127, 2173
SfcI	CTRYAG	5 cut(s)	607, 878, 1507, 1759, 2239
Sfr274I	CTCGAG	3 cut(s)	584, 800, 2260
SfuI	TTCGAA	2 cut(s)	1358, 2165
SinI	GGWCC	3 cut(s)	312, 977, 1265
SlaI	CTCGAG	3 cut(s)	584, 800, 2260
SmaI	CCCGGG	1 cut(s)	1752
SmiMI	CAYNNNNRTG	7 cut(s)	497, 1025, 2135, 2220, 2319, 2403, 2427
SmlI	CTYRAG	6 cut(s)	346, 575, 584, 800, 2001, 2260
SmoI	CTYRAG	6 cut(s)	346, 575, 584, 800, 2001, 2260
SpeI	ACTAGT	1 cut(s)	2249
SphI	GCATGC	1 cut(s)	1666
SsiI	CCGC	5 cut(s)	165, 398, 1058, 2106, 2480
SspMI	CTAG	5 cut(s)	830, 2054, 2250, 2414, 2639
SstI	GAGCTC	2 cut(s)	744, 2207
StyI	CCWWGG	2 cut(s)	616, 2398
TaaI	ACNGT	4 cut(s)	356, 1788, 1919, 2555
TaiI	ACGT	2 cut(s)	210, 2201
TatI	WGTACW	2 cut(s)	2280, 2626
TauI	GCSGC	1 cut(s)	2109
Tru1I	TTAA	3 cut(s)	449, 576, 1892
Tru9I	TTAA	3 cut(s)	449, 576, 1892
TscAI	CASTG	4 cut(s)	1851, 1978, 2101, 2161
TseFI	GTSAC	4 cut(s)	527, 1520, 2049, 2641
Tsp45I	GTSAC	4 cut(s)	527, 1520, 2049, 2641
TspDTI	ATGAA	5 cut(s)	393, 434, 1100, 1911, 2411
TspGWI	ACGGA	2 cut(s)	252, 353
TspMI	CCCGGG	1 cut(s)	1750
TspRI	CASTG	4 cut(s)	1851, 1978, 2101, 2161
Van91I	CCANNNNNTGG	1 cut(s)	729
Vha464I	CTTAAG	1 cut(s)	575
VneI	GTGCAC	1 cut(s)	1147
VpaK11BI	GGWCC	3 cut(s)	312, 977, 1265
XapI	RAATTY	8 cut(s)	361, 696, 823, 920, 1036, 1125, 1591, 2177
XbaI	TCTAGA	1 cut(s)	829
XceI	RCATGY	5 cut(s)	688, 1069, 1666, 2219, 2320
XhoI	CTCGAG	3 cut(s)	584, 800, 2260
XmaI	CCCGGG	1 cut(s)	1750
XmiI	GTMKAC	2 cut(s)	2040, 2274
XmnI	GAANNNNTTC	2 cut(s)	2117, 2234
XspI	CTAG	5 cut(s)	830, 2054, 2250, 2414, 2639
ZrmI	AGTACT	2 cut(s)	2282, 2628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.