Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0004091

Physical Location & Seq

Genomic Coordinates Forward (+)

35838700 .. 35842218

Gene Structure 3519 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG326900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2877 bp

ATGCCATTACCCAAAAACCACCACCTCCATCTCTACCTCCTCTTCTTCCTCTTCCTCCTCTCCAACGCAGCCGCAGCAGACGAGCTTCAAATCCTACTAAAACTCAAATCCTCCCTCCAAGACTCCAACGCCCAACTCTTCGCCACATGGGACTCCACCGCCAATTCGTTTTGCACCTTCACCGGAATCACCTGCAACAACGTCGGTTCGGTTCGAGAAATCGAACTTTCGAACCAGAAGCTGTCGGGGTCTCTTCCGTTGGACTCGATATGCCAACTTCCATCATTAGAAAAGCTGGCTTTCGGGTCCAATCTCCTGCACGGCACAATCACGGAGGACTTGAGAAACTGTACGAATTTGAAGTACCTGGATTTGGCGAAAAACTTGTTCACGGGTTCATTCCCTGACATCTCTTCCTTGTCCCAACTGGAGCATCTTCATTTAAACGACAGCGTGTTTTCGGGGATTTTCCCGTGGACTTCCCTCACCAACATGACTGGTCTGATTCGTTTGAGCTTGGGTGACACCCCGCTTGATCCGAGCCCGTTTCCAAAGGAAGTAGTAACTCTTAAGAAGCTCGAGTGGCTCTACTTGGGATTCTGCAGCATCCAAGGAACGATACCAGGTGAAATCGGGAACTTGGTCGAGCTTATCAACCTGGAGCTGTCCGCTAACAACATGACCGGAGAAATTCCGGCTGAGATTGGACAGCTCACCAAGCTCTGGCAGCTGGAGCTCTGGGCCAACAGTTTCACCGGAAAATTTCCTTTCGGGCTAAGAAACCTCATCAATCTCGAGAACTTCGACGCTTCCTCGAATTTTCTAGAAGGCGATTTGAACGAGTTGGGGTTTCTGACCAATTTGGTTTCTCTGCAGCTGTCTAAGAACAATTTTTCCGGCGATGTACCGGAAGAATTCGGCGAGTTCAAGAAGCTTGTGAGTCTGTGTTTGTACGGTAACAAGCTGACCGGTCCTCTGCCTCAGAAATTGGGGTCTTGGTCGGAGATGGACTACATCGATGTGTCGGAGAATTTCTTGACCGGGACTATTCCGCCGGACATGTGCAACAAAGGGACGATGAAGAAGCTGCTCATGCTTCAGAACAAGTTGACCGGCGAAATTCCGGCAAACTACGCGAAGTGCACGACGCTGACCCGGTTCAGGGTCAACAACAACTCCCTCTCCGGTGTGGTTCCGGCTGGACTTTGGGGATTGCCGAATGTGGCAATCATTGACATCACTTTGAATCAAATTGATGGTCCGATTACTTCCGACATCGGAAACGCCAAGAAGCTTGCGCAGTTGTTTGTGAGTTACAATCGGTTATCTGGTGAATTACCGGACGAGCTTTCGAAGTCAACTTCGTTGGTTTCGGTTGTGTTGAATAACAATCAGTTTTCCGGTGAGATTCCAGAGAAGATAGGGGACTTGAAGCAATTGAGTACTCTGTATTTACAGAGCAACTTGTTGTCTTCTTCAATTCCCAAGTCATTAGGAAGCTGTAGTTTCCTGAGGGACTTGGACATGGCAAACAACTCGCTTTTCGGTAAAATCCCGTCATCTTTGGGCTCTTTGCTGAACTTGAATTCTTTGGATTTGTCTCACAATCAACTCTCCGGTGAAATCCCGAAAAGTCTGGAATCTCTGAGACTAAGCATGCTTGATCTTTCGCACAACAGACTGACCGGTGCCGTACCAGATTCTCTCTCGATTGCAGCCTACAACGGCAGCCTTCGCAGTAACCAGGGTCTCTGCAGCATGGACATCACCTACTTCCCACGGTGCTCGCCGGAAAAGGAAATGTCCAACGGTGTCAGGACACTTATTTGCTTCTCAGTGGGTATAGCAATACTGTTTGTTTCACTCATTTGCTTCTTGTTCTTAAGGAGGAAGAAGAAAGATCAAGACCGTTCATTGAAGGAAGAATCTTGGGATGTAAAGTCTTTCCATGTAATAACCTTCAGTGAGGATGAGATTTTTGATTCCATTACTCAAGAGAATCTCATTGGAAAAGGAGGTTCTGGAAATGTCTACAAAGTGTCACTAGCCAACGGCAAAGAACTTGCCGTGAAGCACATATGGAACACTGATCCAAGCGGCCGGAAAATGTTCAAGAGCACCACACCCATGCTCGGGAGACGGGGCAGTGGTAGTTCGAAATCGAAGGAATCTGATGCTGAGGTGCAGACGTTGAGCTCAATAAGGCATGTGAATGTGGTGAAGTTGTTCTGCAGCATTACTAGTGAGGACTCAAGCCTTTTGGTCTACGAGTACTTACCGAATGGAAGCTTGTGGGATCGGCTGCACATGTGTGAGAACATGAAGCTTGATTGGGACGCAAGGTATGAGATTGCAGTCGGAGCAGCCAAAGGGTTGAAGTATCTGCACCATGGCTGTGGGAGGCTAGTGATTCATAGAGATGTCAAGTCCAGTAACATTTTGTTAGACGAGTCTTTGAAGCCCCGGATTGCGGATTTTGGGCTTGCCAAGATGGTTCAGCCTAATGCAATCAAGGACTCGACTCATGTTGTTGCTGGAACACACGGTTACATAGCTCCTGAATATGGTTACACCTACAAGGTGAATGAGAAGAGCGATGTGTATAGCTTCGGTGTAGTACTAATGGAGCTAGTGACCGGGAAAAAACCGATAGATCCATCATTTGGGGACAACAAGGACATAGTGAACTGGATATGTGGCAACCTGAAGGGTAGAGAGAGTGTGTTAGGTGTGGTGGACTCATACATTCCTGAGGCATATAGAGAAGAGGCTATCAAGGTATTGAGAATTGCAATTCTATGCACAGCTAGGCTTCCAGAGCTAAGACCTTCCATGAGAAGTGTCGTTCAAATGCTTGAAGAAGCTCGGAGCCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001653 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009845 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090351 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

958

Amino Acids

105.82

Weight (kDa)

6.01

Isoelectric Point (pI)

32.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	26 - 66	3.4e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	197 - 324	5.1e-10	Leucine-rich repeat region
Pkinase	PF00069	665 - 950	4.5e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	667 - 952	1.8e-35	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09970 AT1G09970
fragaria_vesca	FvH4_5g33590
malus_domestica	MD08G1210000.v1.1 MD15G1394100.v1.1
prunus_persica	Prupe.1G542300_v2.0.a1
pyrus_communis	pycom08g18120 pycom15g35400 pycom15g35410
rosa_chinensis	RchiOBHm_Chr7g0217331 RchiOBHm_Chr7g0232471
rosa_laevigata	RLG00000001335 RLG00000002489 RLG00000002493
rosa_multiflora	Rmu_sc0001898.1_g000015 Rmu_sc0004663.1_g000011 Rmu_sc0011824.1_g000016
rosa_roxburghii	Rroxscaffold_3G00228280 Rroxscaffold_3G00242430
rosa_rugosa	Rorug07G0168100 Rorug07G0274700
rosa_samantha	Rh7AG307400 Rh7AG307800 Rh7AG428100 Rh7BG298200 Rh7BG402600 Rh7CG326500 Rh7CG326900 Rh7CG447100 Rh7DG306900 Rh7DG418900
rosa_wichuraiana	Rw7G026090 Rw7G035470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	200
Acc16I	TGCGCA	1 cut(s)	1299
Acc36I	ACCTGC	1 cut(s)	200
AccB1I	GGYRCC	1 cut(s)	1688
AccB7I	CCANNNNNTGG	2 cut(s)	723, 2663
AccI	GTMKAC	2 cut(s)	2031, 2265
AccII	CGCG	1 cut(s)	1136
AciI	CCGC	7 cut(s)	72, 159, 530, 669, 1052, 2097, 2471
AclWI	GGATC	4 cut(s)	530, 2084, 2304, 2648
AcoI	YGGCCR	1 cut(s)	2098
AcsI	RAATTY	8 cut(s)	355, 690, 761, 817, 914, 1030, 1119, 1585
AcuI	CTGAAG	3 cut(s)	1082, 1945, 2726
AfaI	GTAC	8 cut(s)	352, 365, 906, 953, 1444, 1695, 2273, 2619
AfiI	CCNNNNNNNGG	9 cut(s)	373, 723, 1161, 1162, 2132, 2133, 2470, 2564, 2663
AflII	CTTAAG	2 cut(s)	569, 1882
AflIII	ACRYGT	2 cut(s)	1059, 2307
AgeI	ACCGGT	2 cut(s)	968, 1685
AhlI	ACTAGT	1 cut(s)	2240
AjnI	CCWGG	4 cut(s)	366, 622, 657, 1743
AleI	CACNNNNGTG	1 cut(s)	2310
AloI	GAACNNNNNNTCC	2 cut(s)	878, 910
Alw21I	GWGCWC	5 cut(s)	738, 1145, 1787, 2120, 2198
Alw26I	GTCTC	5 cut(s)	255, 1605, 1642, 1754, 2131
Alw44I	GTGCAC	1 cut(s)	1141
AlwI	GGATC	4 cut(s)	530, 2084, 2304, 2648
AlwNI	CAGNNNCTG	1 cut(s)	241
Ama87I	CYCGRG	3 cut(s)	578, 794, 2132
AoxI	GGCC	2 cut(s)	741, 2098
ApaLI	GTGCAC	1 cut(s)	1141
ApoI	RAATTY	8 cut(s)	355, 690, 761, 817, 914, 1030, 1119, 1585
ArsI	GACNNNNNNTTYG	2 cut(s)	1243, 1275
AsiGI	ACCGGT	2 cut(s)	968, 1685
Asp700I	GAANNNNTTC	2 cut(s)	2108, 2225
AspLEI	GCGC	1 cut(s)	1300
AspS9I	GGNCC	4 cut(s)	306, 741, 971, 1259
AsuC2I	CCSGG	4 cut(s)	1042, 1156, 2464, 2638
AsuII	TTCGAA	3 cut(s)	230, 1352, 2156
AvaI	CYCGRG	3 cut(s)	578, 794, 2132
AvaII	GGWCC	3 cut(s)	306, 971, 1259
AxyI	CCTNAGG	2 cut(s)	1511, 2751
BaeGI	GKGCMC	1 cut(s)	1145
BanI	GGYRCC	1 cut(s)	1688
BanII	GRGCYC	4 cut(s)	545, 738, 1571, 2198
BbsI	GAAGAC	1 cut(s)	1464
Bbv12I	GWGCWC	5 cut(s)	738, 1145, 1787, 2120, 2198
BbvCI	CCTCAGC	1 cut(s)	2178
BccI	CCATC	6 cut(s)	36, 289, 1000, 1250, 2485, 2665
BceAI	ACGGC	5 cut(s)	337, 1676, 1741, 2051, 2068
BcgI	CGANNNNNNTGC	4 cut(s)	184, 218, 1518, 1552
BciT130I	CCWGG	4 cut(s)	368, 624, 659, 1745
BcnI	CCSGG	4 cut(s)	1042, 1156, 2464, 2638
BcoDI	GTCTC	5 cut(s)	255, 1605, 1642, 1754, 2131
BcuI	ACTAGT	1 cut(s)	2240
BfaI	CTAG	6 cut(s)	824, 2045, 2241, 2405, 2630, 2808
BfmI	CTRYAG	5 cut(s)	601, 872, 1501, 1753, 2230
BfrI	CTTAAG	2 cut(s)	569, 1882
BfuAI	ACCTGC	1 cut(s)	200
BmcAI	AGTACT	3 cut(s)	1444, 2273, 2619
Bme1390I	CCNGG	8 cut(s)	368, 624, 659, 1042, 1156, 1745, 2464, 2638
Bme18I	GGWCC	3 cut(s)	306, 971, 1259
BmeT110I	CYCGRG	3 cut(s)	578, 794, 2132
BmgT120I	GGNCC	4 cut(s)	306, 741, 971, 1259
BmiI	GGNNCC	4 cut(s)	307, 1194, 1690, 2870
BmrFI	CCNGG	8 cut(s)	368, 624, 659, 1042, 1156, 1745, 2464, 2638
BmsI	GCATC	3 cut(s)	442, 615, 2164
BpiI	GAAGAC	1 cut(s)	1464
BpmI	CTGGAG	3 cut(s)	449, 680, 752
Bpu10I	CCTNAGC	1 cut(s)	2178
Bpu14I	TTCGAA	3 cut(s)	230, 1352, 2156
BpuEI	CTTGAG	3 cut(s)	361, 1977, 2236
BpuMI	CCSGG	4 cut(s)	1042, 1156, 2464, 2638
Bsa29I	ATCGAT	1 cut(s)	1017
BsaI	GGTCTC	2 cut(s)	255, 1754
BsaJI	CCNNGG	6 cut(s)	473, 610, 1744, 1778, 2389, 2462
BsaXI	ACNNNNNCTCC	4 cut(s)	1160, 1166, 1190, 1196
Bsc4I	CCNNNNNNNGG	9 cut(s)	373, 723, 1161, 1162, 2132, 2133, 2470, 2564, 2663
Bse118I	RCCGGY	3 cut(s)	968, 1112, 1685
Bse1I	ACTGG	4 cut(s)	432, 502, 2430, 2693
Bse21I	CCTNAGG	2 cut(s)	1511, 2751
BseBI	CCWGG	4 cut(s)	368, 624, 659, 1745
BseCI	ATCGAT	1 cut(s)	1017
BseDI	CCNNGG	6 cut(s)	473, 610, 1744, 1778, 2389, 2462
BseGI	GGATG	3 cut(s)	606, 1939, 1975
BseLI	CCNNNNNNNGG	9 cut(s)	373, 723, 1161, 1162, 2132, 2133, 2470, 2564, 2663
BseMII	CTCAG	7 cut(s)	690, 995, 1502, 1637, 1848, 2169, 2742
BseNI	ACTGG	4 cut(s)	432, 502, 2430, 2693
BseRI	GAGGAG	2 cut(s)	29, 47
BseSI	GKGCMC	1 cut(s)	1145
BseX3I	CGGCCG	1 cut(s)	2098
BsgI	GTGCAG	4 cut(s)	302, 2204, 2288, 2369
Bsh1236I	CGCG	1 cut(s)	1136
Bsh1285I	CGRYCG	1 cut(s)	2101
BshFI	GGCC	2 cut(s)	743, 2100
BshNI	GGYRCC	1 cut(s)	1688
BshTI	ACCGGT	2 cut(s)	968, 1685
BshVI	ATCGAT	1 cut(s)	1017
BsiEI	CGRYCG	1 cut(s)	2101
BsiHKAI	GWGCWC	5 cut(s)	738, 1145, 1787, 2120, 2198
BsiHKCI	CYCGRG	3 cut(s)	578, 794, 2132
BslFI	GGGAC	8 cut(s)	164, 406, 1057, 1087, 1439, 1529, 2348, 2681
BslI	CCNNNNNNNGG	9 cut(s)	373, 723, 1161, 1162, 2132, 2133, 2470, 2564, 2663
BsmAI	GTCTC	5 cut(s)	255, 1605, 1642, 1754, 2131
BsmBI	CGTCTC	1 cut(s)	2131
BsmFI	GGGAC	8 cut(s)	164, 406, 1057, 1087, 1439, 1529, 2348, 2681
BsnI	GGCC	2 cut(s)	743, 2100
Bso31I	GGTCTC	2 cut(s)	255, 1754
BsoBI	CYCGRG	3 cut(s)	578, 794, 2132
Bsp119I	TTCGAA	3 cut(s)	230, 1352, 2156
Bsp1286I	GDGCHC	7 cut(s)	545, 738, 1145, 1571, 1787, 2120, 2198
Bsp143I	GATC	6 cut(s)	535, 1663, 1900, 2089, 2296, 2653
Bsp19I	CCATGG	1 cut(s)	2389
BspACI	CCGC	7 cut(s)	72, 159, 530, 669, 1052, 2097, 2471
BspANI	GGCC	2 cut(s)	743, 2100
BspCNI	CTCAG	7 cut(s)	691, 994, 1503, 1638, 1847, 2170, 2743
BspDI	ATCGAT	1 cut(s)	1017
BspFNI	CGCG	1 cut(s)	1136
BspLI	GGNNCC	4 cut(s)	307, 1194, 1690, 2870
BspMAI	CTGCAG	4 cut(s)	605, 876, 1757, 2234
BspMI	ACCTGC	1 cut(s)	200
BspPI	GGATC	4 cut(s)	530, 2084, 2304, 2648
BspQI	GCTCTTC	1 cut(s)	2585
BspT104I	TTCGAA	3 cut(s)	230, 1352, 2156
BspT107I	GGYRCC	1 cut(s)	1688
BspTI	CTTAAG	2 cut(s)	569, 1882
BspTNI	GGTCTC	2 cut(s)	255, 1754
BsrFI	RCCGGY	3 cut(s)	968, 1112, 1685
BsrI	ACTGG	4 cut(s)	432, 502, 2430, 2693
BssAI	RCCGGY	3 cut(s)	968, 1112, 1685
BssECI	CCNNGG	6 cut(s)	473, 610, 1744, 1778, 2389, 2462
BssMI	GATC	6 cut(s)	535, 1663, 1900, 2089, 2296, 2653
BssT1I	CCWWGG	2 cut(s)	610, 2389
Bst2UI	CCWGG	4 cut(s)	368, 624, 659, 1745
Bst4CI	ACNGT	8 cut(s)	350, 749, 956, 1782, 1811, 1854, 1910, 2546
Bst6I	CTCTTC	7 cut(s)	47, 56, 143, 258, 418, 2585, 2760
BstAFI	CTTAAG	2 cut(s)	569, 1882
BstBI	TTCGAA	3 cut(s)	230, 1352, 2156
BstC8I	GCNNGC	5 cut(s)	297, 1296, 1658, 1787, 2484
BstDSI	CCRYGG	3 cut(s)	473, 1778, 2389
BstF5I	GGATG	3 cut(s)	606, 1939, 1975
BstFNI	CGCG	1 cut(s)	1136
BstHHI	GCGC	1 cut(s)	1300
BstKTI	GATC	6 cut(s)	538, 1666, 1903, 2092, 2299, 2656
BstMAI	GTCTC	5 cut(s)	255, 1605, 1642, 1754, 2131
BstMBI	GATC	6 cut(s)	535, 1663, 1900, 2089, 2296, 2653
BstMCI	CGRYCG	1 cut(s)	2101
BstNI	CCWGG	4 cut(s)	368, 624, 659, 1745
BstNSI	RCATGY	4 cut(s)	1063, 1660, 2210, 2311
BstSCI	CCNGG	8 cut(s)	366, 622, 657, 1040, 1154, 1743, 2462, 2636
BstSFI	CTRYAG	5 cut(s)	601, 872, 1501, 1753, 2230
BstSLI	GKGCMC	1 cut(s)	1145
BstUI	CGCG	1 cut(s)	1136
BstV2I	GAAGAC	1 cut(s)	1464
BstX2I	RGATCY	1 cut(s)	2653
BstXI	CCANNNNNNTGG	1 cut(s)	2396
BstYI	RGATCY	1 cut(s)	2653
BstZI	CGGCCG	1 cut(s)	2098
Bsu15I	ATCGAT	1 cut(s)	1017
Bsu36I	CCTNAGG	2 cut(s)	1511, 2751
BsuRI	GGCC	2 cut(s)	743, 2100
BsuTUI	ATCGAT	1 cut(s)	1017
BtgI	CCRYGG	3 cut(s)	473, 1778, 2389
BtgZI	GCGATG	2 cut(s)	915, 2610
BtsCI	GGATG	3 cut(s)	606, 1939, 1975
BtsI	GCAGTG	1 cut(s)	2152
BtsIMutI	CAGTG	4 cut(s)	1842, 1969, 2085, 2152
BveI	ACCTGC	1 cut(s)	200
Cac8I	GCNNGC	5 cut(s)	297, 1296, 1658, 1787, 2484
CaiI	CAGNNNCTG	1 cut(s)	241
CfoI	GCGC	1 cut(s)	1300
Cfr10I	RCCGGY	3 cut(s)	968, 1112, 1685
Cfr13I	GGNCC	4 cut(s)	306, 741, 971, 1259
ClaI	ATCGAT	1 cut(s)	1017
CseI	GACGC	3 cut(s)	815, 1156, 2345
CsiI	ACCWGGT	1 cut(s)	622
Csp6I	GTAC	8 cut(s)	351, 364, 905, 952, 1443, 1694, 2272, 2618
CspAI	ACCGGT	2 cut(s)	968, 1685
CviQI	GTAC	8 cut(s)	351, 364, 905, 952, 1443, 1694, 2272, 2618
DpnI	GATC	6 cut(s)	537, 1665, 1902, 2091, 2298, 2655
DpnII	GATC	6 cut(s)	535, 1663, 1900, 2089, 2296, 2653
DraI	TTTAAA	1 cut(s)	444
EaeI	YGGCCR	1 cut(s)	2098
EagI	CGGCCG	1 cut(s)	2098
Eam1104I	CTCTTC	7 cut(s)	47, 56, 143, 258, 418, 2585, 2760
EarI	CTCTTC	7 cut(s)	47, 56, 143, 258, 418, 2585, 2760
EciI	GGCGGA	1 cut(s)	1041
Ecl136II	GAGCTC	2 cut(s)	736, 2196
EclXI	CGGCCG	1 cut(s)	2098
Eco130I	CCWWGG	2 cut(s)	610, 2389
Eco24I	GRGCYC	4 cut(s)	545, 738, 1571, 2198
Eco31I	GGTCTC	2 cut(s)	255, 1754
Eco47I	GGWCC	3 cut(s)	306, 971, 1259
Eco52I	CGGCCG	1 cut(s)	2098
Eco53kI	GAGCTC	2 cut(s)	736, 2196
Eco57I	CTGAAG	3 cut(s)	1082, 1945, 2726
Eco81I	CCTNAGG	2 cut(s)	1511, 2751
Eco88I	CYCGRG	3 cut(s)	578, 794, 2132
EcoICRI	GAGCTC	2 cut(s)	736, 2196
EcoRI	GAATTC	2 cut(s)	914, 1585
EcoRII	CCWGG	4 cut(s)	366, 622, 657, 1743
EcoT14I	CCWWGG	2 cut(s)	610, 2389
EcoT38I	GRGCYC	4 cut(s)	545, 738, 1571, 2198
ErhI	CCWWGG	2 cut(s)	610, 2389
Esp3I	CGTCTC	1 cut(s)	2131
FaqI	GGGAC	8 cut(s)	164, 406, 1057, 1087, 1439, 1529, 2348, 2681
FauI	CCCGC	1 cut(s)	537
FauNDI	CATATG	1 cut(s)	2078
FblI	GTMKAC	2 cut(s)	2031, 2265
FokI	GGATG	3 cut(s)	593, 1946, 1982
FriOI	GRGCYC	4 cut(s)	545, 738, 1571, 2198
FspBI	CTAG	6 cut(s)	824, 2045, 2241, 2405, 2630, 2808
FspI	TGCGCA	1 cut(s)	1299
GlaI	GCGC	1 cut(s)	1299
GsuI	CTGGAG	3 cut(s)	449, 680, 752
HaeIII	GGCC	2 cut(s)	743, 2100
HgaI	GACGC	3 cut(s)	815, 1156, 2345
HhaI	GCGC	1 cut(s)	1300
Hin6I	GCGC	1 cut(s)	1298
HinP1I	GCGC	1 cut(s)	1298
HincII	GTYRAC	3 cut(s)	1110, 1168, 1359
HindII	GTYRAC	3 cut(s)	1110, 1168, 1359
HindIII	AAGCTT	4 cut(s)	932, 1292, 2287, 2324
Hpy99I	CGWCG	3 cut(s)	206, 809, 1150
HpyAV	CCTTC	8 cut(s)	187, 821, 1742, 1912, 1969, 2158, 2701, 2838
HpyCH4III	ACNGT	8 cut(s)	350, 749, 956, 1782, 1811, 1854, 1910, 2546
HpyCH4IV	ACGT	2 cut(s)	201, 2189
HpySE526I	ACGT	2 cut(s)	201, 2189
HspAI	GCGC	1 cut(s)	1298
Kzo9I	GATC	6 cut(s)	535, 1663, 1900, 2089, 2296, 2653
LguI	GCTCTTC	1 cut(s)	2585
LmnI	GCTCC	7 cut(s)	430, 661, 733, 2360, 2560, 2626, 2868
LweI	GCATC	3 cut(s)	442, 615, 2164
MabI	ACCWGGT	1 cut(s)	622
MaeI	CTAG	6 cut(s)	824, 2045, 2241, 2405, 2630, 2808
MaeII	ACGT	2 cut(s)	201, 2189
MalI	GATC	6 cut(s)	537, 1665, 1902, 2091, 2298, 2655
MboI	GATC	6 cut(s)	535, 1663, 1900, 2089, 2296, 2653
MfeI	CAATTG	1 cut(s)	1436
MflI	RGATCY	1 cut(s)	2653
MhlI	GDGCHC	7 cut(s)	545, 738, 1145, 1571, 1787, 2120, 2198
MlyI	GAGTC	9 cut(s)	116, 146, 257, 949, 2243, 2459, 2510, 2515, 2732
MmeI	TCCRAC	8 cut(s)	87, 150, 240, 981, 1005, 1296, 1830, 2338
MroXI	GAANNNNTTC	2 cut(s)	2108, 2225
MseI	TTAA	3 cut(s)	443, 570, 1883
MslI	CAYNNNNRTG	7 cut(s)	491, 1019, 2126, 2211, 2310, 2394, 2418
MspA1I	CMGCKG	2 cut(s)	730, 877
MspCI	CTTAAG	2 cut(s)	569, 1882
MspR9I	CCNGG	8 cut(s)	368, 624, 659, 1042, 1156, 1745, 2464, 2638
MunI	CAATTG	1 cut(s)	1436
MvaI	CCWGG	4 cut(s)	368, 624, 659, 1745
MvnI	CGCG	1 cut(s)	1136
NciI	CCSGG	4 cut(s)	1042, 1156, 2464, 2638
NcoI	CCATGG	1 cut(s)	2389
NdeI	CATATG	1 cut(s)	2078
NdeII	GATC	6 cut(s)	535, 1663, 1900, 2089, 2296, 2653
NlaIV	GGNNCC	4 cut(s)	307, 1194, 1690, 2870
NmuCI	GTSAC	3 cut(s)	521, 2040, 2632
NsbI	TGCGCA	1 cut(s)	1299
NspI	RCATGY	4 cut(s)	1063, 1660, 2210, 2311
NspV	TTCGAA	3 cut(s)	230, 1352, 2156
OliI	CACNNNNGTG	1 cut(s)	2310
PaeI	GCATGC	1 cut(s)	1660
PaeR7I	CTCGAG	2 cut(s)	578, 794
PaqCI	CACCTGC	1 cut(s)	200
PciI	ACATGT	2 cut(s)	1059, 2307
PciSI	GCTCTTC	1 cut(s)	2585
PcsI	WCGNNNNNNNCGW	1 cut(s)	801
PdmI	GAANNNNTTC	2 cut(s)	2108, 2225
PflMI	CCANNNNNTGG	2 cut(s)	723, 2663
PinAI	ACCGGT	2 cut(s)	968, 1685
PleI	GAGTC	9 cut(s)	116, 146, 257, 948, 2243, 2458, 2510, 2515, 2732
PpsI	GAGTC	9 cut(s)	116, 146, 257, 948, 2243, 2458, 2510, 2515, 2732
PscI	ACATGT	2 cut(s)	1059, 2307
Psp124BI	GAGCTC	2 cut(s)	738, 2198
Psp6I	CCWGG	4 cut(s)	366, 622, 657, 1743
PspGI	CCWGG	4 cut(s)	366, 622, 657, 1743
PspN4I	GGNNCC	4 cut(s)	307, 1194, 1690, 2870
PspPI	GGNCC	4 cut(s)	306, 741, 971, 1259
PspXI	VCTCGAGB	1 cut(s)	578
PstI	CTGCAG	4 cut(s)	605, 876, 1757, 2234
PstNI	CAGNNNCTG	1 cut(s)	241
PsuI	RGATCY	1 cut(s)	2653
PvuII	CAGCTG	2 cut(s)	730, 877
RsaI	GTAC	8 cut(s)	352, 365, 906, 953, 1444, 1695, 2273, 2619
RsaNI	GTAC	8 cut(s)	351, 364, 905, 952, 1443, 1694, 2272, 2618
RseI	CAYNNNNRTG	7 cut(s)	491, 1019, 2126, 2211, 2310, 2394, 2418
SacI	GAGCTC	2 cut(s)	738, 2198
SapI	GCTCTTC	1 cut(s)	2585
SaqAI	TTAA	3 cut(s)	443, 570, 1883
Sau3AI	GATC	6 cut(s)	535, 1663, 1900, 2089, 2296, 2653
Sau96I	GGNCC	4 cut(s)	306, 741, 971, 1259
ScaI	AGTACT	3 cut(s)	1444, 2273, 2619
SchI	GAGTC	9 cut(s)	116, 146, 257, 949, 2243, 2459, 2510, 2515, 2732
ScrFI	CCNGG	8 cut(s)	368, 624, 659, 1042, 1156, 1745, 2464, 2638
SduI	GDGCHC	7 cut(s)	545, 738, 1145, 1571, 1787, 2120, 2198
SexAI	ACCWGGT	1 cut(s)	622
SfaNI	GCATC	3 cut(s)	442, 615, 2164
SfcI	CTRYAG	5 cut(s)	601, 872, 1501, 1753, 2230
Sfr274I	CTCGAG	2 cut(s)	578, 794
SfuI	TTCGAA	3 cut(s)	230, 1352, 2156
SinI	GGWCC	3 cut(s)	306, 971, 1259
SlaI	CTCGAG	2 cut(s)	578, 794
SmiMI	CAYNNNNRTG	7 cut(s)	491, 1019, 2126, 2211, 2310, 2394, 2418
SmlI	CTYRAG	7 cut(s)	340, 569, 578, 794, 1882, 1992, 2251
SmoI	CTYRAG	7 cut(s)	340, 569, 578, 794, 1882, 1992, 2251
SpeI	ACTAGT	1 cut(s)	2240
SphI	GCATGC	1 cut(s)	1660
SsiI	CCGC	7 cut(s)	72, 159, 530, 669, 1052, 2097, 2471
SspMI	CTAG	6 cut(s)	824, 2045, 2241, 2405, 2630, 2808
SstI	GAGCTC	2 cut(s)	738, 2198
StyD4I	CCNGG	8 cut(s)	366, 622, 657, 1040, 1154, 1743, 2462, 2636
StyI	CCWWGG	2 cut(s)	610, 2389
TaaI	ACNGT	8 cut(s)	350, 749, 956, 1782, 1811, 1854, 1910, 2546
TaiI	ACGT	2 cut(s)	204, 2192
TatI	WGTACW	3 cut(s)	1442, 2271, 2617
TauI	GCSGC	2 cut(s)	74, 2100
Tru1I	TTAA	3 cut(s)	443, 570, 1883
Tru9I	TTAA	3 cut(s)	443, 570, 1883
TscAI	CASTG	4 cut(s)	1842, 1969, 2092, 2152
TseFI	GTSAC	3 cut(s)	521, 2040, 2632
Tsp45I	GTSAC	3 cut(s)	521, 2040, 2632
TspDTI	ATGAA	6 cut(s)	387, 428, 1094, 1902, 2336, 2402
TspGWI	ACGGA	2 cut(s)	246, 347
TspRI	CASTG	4 cut(s)	1842, 1969, 2092, 2152
Van91I	CCANNNNNTGG	2 cut(s)	723, 2663
Vha464I	CTTAAG	2 cut(s)	569, 1882
VneI	GTGCAC	1 cut(s)	1141
VpaK11BI	GGWCC	3 cut(s)	306, 971, 1259
XapI	RAATTY	8 cut(s)	355, 690, 761, 817, 914, 1030, 1119, 1585
XbaI	TCTAGA	1 cut(s)	823
XceI	RCATGY	4 cut(s)	1063, 1660, 2210, 2311
XhoI	CTCGAG	2 cut(s)	578, 794
XmiI	GTMKAC	2 cut(s)	2031, 2265
XmnI	GAANNNNTTC	2 cut(s)	2108, 2225
XspI	CTAG	6 cut(s)	824, 2045, 2241, 2405, 2630, 2808
ZrmI	AGTACT	3 cut(s)	1444, 2273, 2619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.