regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50380 AT3G50380 AT3G50380 AT3G50380 |
| fragaria_vesca | FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_5g25081 FvH4_5g34340 |
| malus_domestica | MD02G1159300.v1.1 |
| prunus_persica | Prupe.7G144700_v2.0.a1 Prupe.7G144700_v2.0.a1 Prupe.7G144700_v2.0.a1 |
| pyrus_communis | pycom02g12560 |
| rosa_chinensis | RchiOBHm_Chr2g0103341 |
| rosa_laevigata | RLG00000017225 |
| rosa_multiflora | Rmu_sc0001555.1_g000014 Rmu_sc0009003.1_g000002 Rmu_sc0010053.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00139720 |
| rosa_rugosa | Rorug02G0114000 |
| rosa_samantha | Rh2AG162300 Rh2BG169400 Rh2CG169400 Rh2DG168200 |
| rosa_wichuraiana | Rw0G019420 Rw2G012750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 99 |
| AgsI | TTSAA | 1 cut(s) | 37 |
| AluBI | AGCT | 2 cut(s) | 68, 196 |
| AluI | AGCT | 2 cut(s) | 68, 196 |
| AoxI | GGCC | 1 cut(s) | 175 |
| ApoI | RAATTY | 1 cut(s) | 99 |
| AspS9I | GGNCC | 1 cut(s) | 176 |
| AsuHPI | GGTGA | 1 cut(s) | 89 |
| BccI | CCATC | 3 cut(s) | 28, 151, 160 |
| BclI | TGATCA | 1 cut(s) | 199 |
| BglII | AGATCT | 1 cut(s) | 39 |
| BmgT120I | GGNCC | 1 cut(s) | 176 |
| BmiI | GGNNCC | 2 cut(s) | 49, 141 |
| BseGI | GGATG | 1 cut(s) | 103 |
| BseMII | CTCAG | 1 cut(s) | 57 |
| BseYI | CCCAGC | 1 cut(s) | 84 |
| BshFI | GGCC | 1 cut(s) | 177 |
| BsnI | GGCC | 1 cut(s) | 177 |
| Bsp143I | GATC | 2 cut(s) | 39, 199 |
| BspANI | GGCC | 1 cut(s) | 177 |
| BspCNI | CTCAG | 1 cut(s) | 56 |
| BspLI | GGNNCC | 2 cut(s) | 49, 141 |
| BssMI | GATC | 2 cut(s) | 39, 199 |
| Bst4CI | ACNGT | 1 cut(s) | 206 |
| BstDEI | CTNAG | 2 cut(s) | 8, 43 |
| BstF5I | GGATG | 1 cut(s) | 103 |
| BstKTI | GATC | 2 cut(s) | 42, 202 |
| BstMBI | GATC | 2 cut(s) | 39, 199 |
| BstX2I | RGATCY | 1 cut(s) | 39 |
| BstYI | RGATCY | 1 cut(s) | 39 |
| BsuRI | GGCC | 1 cut(s) | 177 |
| BtsCI | GGATG | 1 cut(s) | 103 |
| Cfr13I | GGNCC | 1 cut(s) | 176 |
| CviAII | CATG | 1 cut(s) | 127 |
| CviJI | RGCY | 4 cut(s) | 68, 142, 177, 196 |
| CviKI_1 | RGCY | 4 cut(s) | 68, 142, 177, 196 |
| DdeI | CTNAG | 2 cut(s) | 8, 43 |
| DpnI | GATC | 2 cut(s) | 41, 201 |
| DpnII | GATC | 2 cut(s) | 39, 199 |
| FaeI | CATG | 1 cut(s) | 130 |
| FaiI | YATR | 1 cut(s) | 128 |
| FatI | CATG | 1 cut(s) | 126 |
| FbaI | TGATCA | 1 cut(s) | 199 |
| FokI | GGATG | 1 cut(s) | 90 |
| GsaI | CCCAGC | 1 cut(s) | 88 |
| HaeIII | GGCC | 1 cut(s) | 177 |
| Hin1II | CATG | 1 cut(s) | 130 |
| HindIII | AAGCTT | 1 cut(s) | 194 |
| HphI | GGTGA | 1 cut(s) | 89 |
| Hpy188I | TCNGA | 1 cut(s) | 97 |
| Hpy188III | TCNNGA | 1 cut(s) | 45 |
| HpyAV | CCTTC | 1 cut(s) | 164 |
| HpyCH4III | ACNGT | 1 cut(s) | 206 |
| HpyF3I | CTNAG | 2 cut(s) | 8, 43 |
| Hsp92II | CATG | 1 cut(s) | 130 |
| Ksp22I | TGATCA | 1 cut(s) | 199 |
| Kzo9I | GATC | 2 cut(s) | 39, 199 |
| LmnI | GCTCC | 2 cut(s) | 73, 139 |
| LpnPI | CCDG | 4 cut(s) | 30, 98, 192, 222 |
| MalI | GATC | 2 cut(s) | 41, 201 |
| MboI | GATC | 2 cut(s) | 39, 199 |
| MboII | GAAGA | 1 cut(s) | 49 |
| MflI | RGATCY | 1 cut(s) | 39 |
| MluCI | AATT | 2 cut(s) | 32, 99 |
| MnlI | CCTC | 2 cut(s) | 3, 123 |
| MseI | TTAA | 1 cut(s) | 192 |
| NdeII | GATC | 2 cut(s) | 39, 199 |
| NlaIII | CATG | 1 cut(s) | 130 |
| NlaIV | GGNNCC | 2 cut(s) | 49, 141 |
| PspFI | CCCAGC | 1 cut(s) | 84 |
| PspN4I | GGNNCC | 2 cut(s) | 49, 141 |
| PspPI | GGNCC | 1 cut(s) | 176 |
| PsuI | RGATCY | 1 cut(s) | 39 |
| SaqAI | TTAA | 1 cut(s) | 192 |
| Sau3AI | GATC | 2 cut(s) | 39, 199 |
| Sau96I | GGNCC | 1 cut(s) | 176 |
| SetI | ASST | 3 cut(s) | 70, 175, 198 |
| SgeI | CNNG | 8 cut(s) | 57, 97, 103, 121, 139, 191, 209, 221 |
| Sse9I | AATT | 2 cut(s) | 32, 99 |
| TaaI | ACNGT | 1 cut(s) | 206 |
| TasI | AATT | 2 cut(s) | 32, 99 |
| Tru1I | TTAA | 1 cut(s) | 192 |
| Tru9I | TTAA | 1 cut(s) | 192 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| XapI | RAATTY | 1 cut(s) | 99 |