regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50380 AT3G50380 AT3G50380 AT3G50380 |
| fragaria_vesca | FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_5g25081 FvH4_5g34340 |
| malus_domestica | MD02G1159300.v1.1 |
| prunus_persica | Prupe.7G144700_v2.0.a1 Prupe.7G144700_v2.0.a1 Prupe.7G144700_v2.0.a1 |
| pyrus_communis | pycom02g12560 |
| rosa_chinensis | RchiOBHm_Chr2g0103341 |
| rosa_laevigata | RLG00000017225 |
| rosa_multiflora | Rmu_sc0001555.1_g000014 Rmu_sc0009003.1_g000002 Rmu_sc0010053.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00139720 |
| rosa_rugosa | Rorug02G0114000 |
| rosa_samantha | Rh2AG162300 Rh2BG169400 Rh2CG169400 Rh2DG168200 |
| rosa_wichuraiana | Rw0G019420 Rw2G012750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 4406, 7730, 8348 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 7642, 8020, 8709 |
| AatII | GACGTC | 3 cut(s) | 3247, 3858, 5638 |
| Acc36I | ACCTGC | 1 cut(s) | 8334 |
| Acc65I | GGTACC | 1 cut(s) | 7925 |
| AccB1I | GGYRCC | 2 cut(s) | 6385, 7925 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1525, 1660, 6069 |
| AccI | GTMKAC | 5 cut(s) | 3185, 4766, 5439, 7199, 7342 |
| AclI | AACGTT | 1 cut(s) | 3024 |
| AcoI | YGGCCR | 2 cut(s) | 1436, 5145 |
| AcuI | CTGAAG | 9 cut(s) | 243, 475, 486, 1785, 3123, 5088, 5377, 5822, 6012 |
| AcyI | GRCGYC | 4 cut(s) | 3244, 3855, 5635, 6386 |
| AfeI | AGCGCT | 1 cut(s) | 3715 |
| AflII | CTTAAG | 2 cut(s) | 5872, 7054 |
| AflIII | ACRYGT | 6 cut(s) | 651, 903, 1285, 5094, 5608, 6286 |
| AjiI | CACGTC | 1 cut(s) | 5095 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 1061, 1093, 3014, 3046, 3402, 3434, 4867, 4899 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 4533, 4565, 5298, 5330 |
| Alw21I | GWGCWC | 9 cut(s) | 1416, 2028, 2421, 2579, 3267, 4790, 7321, 7701, 7762 |
| Alw44I | GTGCAC | 3 cut(s) | 1412, 2024, 7758 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1484, 1525, 2636, 4529, 8048 |
| Ama87I | CYCGRG | 3 cut(s) | 5883, 6961, 7047 |
| Aor51HI | AGCGCT | 1 cut(s) | 3715 |
| ApaI | GGGCCC | 1 cut(s) | 1476 |
| ApaLI | GTGCAC | 3 cut(s) | 1412, 2024, 7758 |
| AseI | ATTAAT | 1 cut(s) | 7487 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 828, 3433, 4067, 5363, 5860, 6902 |
| Asp718I | GGTACC | 1 cut(s) | 7925 |
| AspA2I | CCTAGG | 1 cut(s) | 7996 |
| AspLEI | GCGC | 6 cut(s) | 1945, 2605, 2957, 3716, 3822, 6388 |
| AsuC2I | CCSGG | 4 cut(s) | 1167, 2517, 7048, 7049 |
| AvaI | CYCGRG | 3 cut(s) | 5883, 6961, 7047 |
| AvrII | CCTAGG | 1 cut(s) | 7996 |
| AxyI | CCTNAGG | 2 cut(s) | 1508, 5192 |
| BaeGI | GKGCMC | 5 cut(s) | 1416, 1476, 2028, 3886, 7762 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2814, 2847 |
| BalI | TGGCCA | 2 cut(s) | 1438, 5147 |
| BanI | GGYRCC | 2 cut(s) | 6385, 7925 |
| BanII | GRGCYC | 4 cut(s) | 1476, 2522, 3945, 7701 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 651, 683, 4750, 4782, 6890, 6922 |
| BauI | CACGAG | 1 cut(s) | 7890 |
| BbsI | GAAGAC | 4 cut(s) | 2205, 5097, 6848, 7867 |
| Bbv12I | GWGCWC | 9 cut(s) | 1416, 2028, 2421, 2579, 3267, 4790, 7321, 7701, 7762 |
| BbvCI | CCTCAGC | 1 cut(s) | 1477 |
| BceAI | ACGGC | 1 cut(s) | 8031 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 8592, 8626 |
| BciVI | GTATCC | 2 cut(s) | 8234, 8254 |
| BclI | TGATCA | 4 cut(s) | 865, 2254, 3525, 7552 |
| BcnI | CCSGG | 4 cut(s) | 1167, 2517, 7048, 7049 |
| BfoI | RGCGCY | 2 cut(s) | 3717, 6389 |
| BfrI | CTTAAG | 2 cut(s) | 5872, 7054 |
| BfuAI | ACCTGC | 1 cut(s) | 8334 |
| BfuI | GTATCC | 2 cut(s) | 8234, 8254 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 7787 |
| BglII | AGATCT | 4 cut(s) | 448, 1578, 4853, 6200 |
| BlnI | CCTAGG | 1 cut(s) | 7996 |
| BlpI | GCTNAGC | 2 cut(s) | 2578, 3676 |
| BmcAI | AGTACT | 4 cut(s) | 959, 2251, 4666, 7436 |
| BmeT110I | CYCGRG | 3 cut(s) | 5883, 6961, 7047 |
| BmgBI | CACGTC | 1 cut(s) | 5095 |
| BmrI | ACTGGG | 3 cut(s) | 2561, 3946, 4469 |
| BmuI | ACTGGG | 3 cut(s) | 2561, 3946, 4469 |
| BoxI | GACNNNNGTC | 1 cut(s) | 8208 |
| BpiI | GAAGAC | 4 cut(s) | 2205, 5097, 6848, 7867 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 6373, 6405, 7501, 7533 |
| BpmI | CTGGAG | 6 cut(s) | 385, 1681, 3328, 4137, 4794, 6476 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1477, 1569, 2455 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2578, 3676 |
| BpuEI | CTTGAG | 5 cut(s) | 2506, 3023, 3114, 4884, 6551 |
| BpuMI | CCSGG | 4 cut(s) | 1167, 2517, 7048, 7049 |
| Bsa29I | ATCGAT | 1 cut(s) | 7953 |
| BsaAI | YACGTR | 1 cut(s) | 6866 |
| BsaBI | GATNNNNATC | 6 cut(s) | 703, 1087, 1535, 3627, 5559, 7467 |
| BsaHI | GRCGYC | 4 cut(s) | 3244, 3855, 5635, 6386 |
| BsaI | GGTCTC | 1 cut(s) | 8400 |
| BsaWI | WCCGGW | 1 cut(s) | 3535 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 4533, 4563, 4688, 4718, 7292, 7322 |
| Bse21I | CCTNAGG | 2 cut(s) | 1508, 5192 |
| Bse8I | GATNNNNATC | 6 cut(s) | 703, 1087, 1535, 3627, 5559, 7467 |
| BseCI | ATCGAT | 1 cut(s) | 7953 |
| BseJI | GATNNNNATC | 6 cut(s) | 703, 1087, 1535, 3627, 5559, 7467 |
| BseRI | GAGGAG | 6 cut(s) | 1946, 3533, 5010, 7493, 7646, 8599 |
| BseSI | GKGCMC | 5 cut(s) | 1416, 1476, 2028, 3886, 7762 |
| BseYI | CCCAGC | 1 cut(s) | 1140 |
| BsgI | GTGCAG | 3 cut(s) | 465, 3705, 7637 |
| BshNI | GGYRCC | 2 cut(s) | 6385, 7925 |
| BshVI | ATCGAT | 1 cut(s) | 7953 |
| BsiHKAI | GWGCWC | 9 cut(s) | 1416, 2028, 2421, 2579, 3267, 4790, 7321, 7701, 7762 |
| BsiHKCI | CYCGRG | 3 cut(s) | 5883, 6961, 7047 |
| BsiSI | CCGG | 4 cut(s) | 1167, 2516, 3536, 7048 |
| BslFI | GGGAC | 9 cut(s) | 267, 2005, 2925, 6263, 6980, 7484, 7655, 7987, 8582 |
| BsmBI | CGTCTC | 5 cut(s) | 3862, 5324, 6101, 6119, 7869 |
| BsmFI | GGGAC | 9 cut(s) | 267, 2005, 2925, 6263, 6980, 7484, 7655, 7987, 8582 |
| BsmI | GAATGC | 2 cut(s) | 3805, 6021 |
| Bso31I | GGTCTC | 1 cut(s) | 8400 |
| BsoBI | CYCGRG | 3 cut(s) | 5883, 6961, 7047 |
| Bsp120I | GGGCCC | 1 cut(s) | 1472 |
| Bsp1407I | TGTACA | 5 cut(s) | 2888, 2986, 5485, 7282, 7423 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2578, 3676 |
| Bsp19I | CCATGG | 3 cut(s) | 5142, 5691, 8119 |
| BspDI | ATCGAT | 1 cut(s) | 7953 |
| BspHI | TCATGA | 1 cut(s) | 4090 |
| BspMAI | CTGCAG | 4 cut(s) | 1747, 1840, 7455, 8044 |
| BspMI | ACCTGC | 1 cut(s) | 8334 |
| BspQI | GCTCTTC | 1 cut(s) | 3255 |
| BspT107I | GGYRCC | 2 cut(s) | 6385, 7925 |
| BspTI | CTTAAG | 2 cut(s) | 5872, 7054 |
| BspTNI | GGTCTC | 1 cut(s) | 8400 |
| BsrGI | TGTACA | 5 cut(s) | 2888, 2986, 5485, 7282, 7423 |
| BssNAI | GTATAC | 1 cut(s) | 7200 |
| BssNI | GRCGYC | 4 cut(s) | 3244, 3855, 5635, 6386 |
| BssSI | CACGAG | 1 cut(s) | 7890 |
| BssT1I | CCWWGG | 6 cut(s) | 4333, 5142, 5691, 7996, 8119, 8430 |
| Bst1107I | GTATAC | 1 cut(s) | 7200 |
| Bst2BI | CACGAG | 1 cut(s) | 7890 |
| Bst6I | CTCTTC | 8 cut(s) | 654, 2967, 3255, 4305, 6413, 6825, 7526, 7911 |
| BstACI | GRCGYC | 4 cut(s) | 3244, 3855, 5635, 6386 |
| BstAFI | CTTAAG | 2 cut(s) | 5872, 7054 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2110 |
| BstAUI | TGTACA | 5 cut(s) | 2888, 2986, 5485, 7282, 7423 |
| BstBAI | YACGTR | 1 cut(s) | 6866 |
| BstC8I | GCNNGC | 9 cut(s) | 219, 819, 1821, 3792, 6722, 8250, 8535, 8605, 8737 |
| BstDSI | CCRYGG | 3 cut(s) | 5142, 5691, 8119 |
| BstEII | GGTNACC | 1 cut(s) | 7991 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3086 |
| BstH2I | RGCGCY | 2 cut(s) | 3717, 6389 |
| BstHHI | GCGC | 6 cut(s) | 1945, 2605, 2957, 3716, 3822, 6388 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 8208 |
| BstPI | GGTNACC | 1 cut(s) | 7991 |
| BstSLI | GKGCMC | 5 cut(s) | 1416, 1476, 2028, 3886, 7762 |
| BstV2I | GAAGAC | 4 cut(s) | 2205, 5097, 6848, 7867 |
| BstX2I | RGATCY | 8 cut(s) | 448, 698, 1578, 3839, 4853, 6188, 6200, 7563 |
| BstYI | RGATCY | 8 cut(s) | 448, 698, 1578, 3839, 4853, 6188, 6200, 7563 |
| BstZ17I | GTATAC | 1 cut(s) | 7200 |
| Bsu15I | ATCGAT | 1 cut(s) | 7953 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1508, 5192 |
| BsuI | GTATCC | 2 cut(s) | 8234, 8254 |
| BsuTUI | ATCGAT | 1 cut(s) | 7953 |
| BtgI | CCRYGG | 3 cut(s) | 5142, 5691, 8119 |
| BtgZI | GCGATG | 4 cut(s) | 2737, 8267, 8533, 8592 |
| BtrI | CACGTC | 1 cut(s) | 5095 |
| BtsI | GCAGTG | 4 cut(s) | 1975, 4351, 5397, 5785 |
| BveI | ACCTGC | 1 cut(s) | 8334 |
| Cac8I | GCNNGC | 9 cut(s) | 219, 819, 1821, 3792, 6722, 8250, 8535, 8605, 8737 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1484, 1525, 2636, 4529, 8048 |
| CciI | TCATGA | 1 cut(s) | 4090 |
| CfoI | GCGC | 6 cut(s) | 1945, 2605, 2957, 3716, 3822, 6388 |
| Cfr9I | CCCGGG | 1 cut(s) | 7047 |
| ClaI | ATCGAT | 1 cut(s) | 7953 |
| CseI | GACGC | 3 cut(s) | 5637, 6083, 6136 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 6813, 6848 |
| DinI | GGCGCC | 1 cut(s) | 6387 |
| DraI | TTTAAA | 3 cut(s) | 991, 3405, 7467 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 7642, 8020, 8709 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 7642, 8020, 8709 |
| EaeI | YGGCCR | 2 cut(s) | 1436, 5145 |
| Eam1104I | CTCTTC | 8 cut(s) | 654, 2967, 3255, 4305, 6413, 6825, 7526, 7911 |
| EarI | CTCTTC | 8 cut(s) | 654, 2967, 3255, 4305, 6413, 6825, 7526, 7911 |
| EciI | GGCGGA | 1 cut(s) | 1610 |
| Ecl136II | GAGCTC | 1 cut(s) | 7699 |
| Eco130I | CCWWGG | 6 cut(s) | 4333, 5142, 5691, 7996, 8119, 8430 |
| Eco24I | GRGCYC | 4 cut(s) | 1476, 2522, 3945, 7701 |
| Eco31I | GGTCTC | 1 cut(s) | 8400 |
| Eco32I | GATATC | 3 cut(s) | 675, 1537, 3783 |
| Eco47III | AGCGCT | 1 cut(s) | 3715 |
| Eco53kI | GAGCTC | 1 cut(s) | 7699 |
| Eco57I | CTGAAG | 9 cut(s) | 243, 475, 486, 1785, 3123, 5088, 5377, 5822, 6012 |
| Eco81I | CCTNAGG | 2 cut(s) | 1508, 5192 |
| Eco88I | CYCGRG | 3 cut(s) | 5883, 6961, 7047 |
| Eco91I | GGTNACC | 1 cut(s) | 7991 |
| EcoICRI | GAGCTC | 1 cut(s) | 7699 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3086 |
| EcoO109I | RGGNCCY | 9 cut(s) | 1472, 1473, 1992, 3091, 3966, 5188, 5982, 7644, 7669 |
| EcoO65I | GGTNACC | 1 cut(s) | 7991 |
| EcoRI | GAATTC | 2 cut(s) | 3754, 6623 |
| EcoRV | GATATC | 3 cut(s) | 675, 1537, 3783 |
| EcoT14I | CCWWGG | 6 cut(s) | 4333, 5142, 5691, 7996, 8119, 8430 |
| EcoT22I | ATGCAT | 3 cut(s) | 5448, 6121, 6542 |
| EcoT38I | GRGCYC | 4 cut(s) | 1476, 2522, 3945, 7701 |
| EgeI | GGCGCC | 1 cut(s) | 6387 |
| EheI | GGCGCC | 1 cut(s) | 6387 |
| ErhI | CCWWGG | 6 cut(s) | 4333, 5142, 5691, 7996, 8119, 8430 |
| Esp3I | CGTCTC | 5 cut(s) | 3862, 5324, 6101, 6119, 7869 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 2169, 2201, 3659, 3691, 5351, 5383 |
| FaqI | GGGAC | 9 cut(s) | 267, 2005, 2925, 6263, 6980, 7484, 7655, 7987, 8582 |
| FauI | CCCGC | 1 cut(s) | 3673 |
| FauNDI | CATATG | 4 cut(s) | 3636, 5131, 7182, 7255 |
| FbaI | TGATCA | 4 cut(s) | 865, 2254, 3525, 7552 |
| FblI | GTMKAC | 5 cut(s) | 3185, 4766, 5439, 7199, 7342 |
| FriOI | GRGCYC | 4 cut(s) | 1476, 2522, 3945, 7701 |
| GlaI | GCGC | 6 cut(s) | 1944, 2604, 2956, 3715, 3821, 6387 |
| GsaI | CCCAGC | 1 cut(s) | 1144 |
| GsuI | CTGGAG | 6 cut(s) | 385, 1681, 3328, 4137, 4794, 6476 |
| HaeII | RGCGCY | 2 cut(s) | 3717, 6389 |
| HapII | CCGG | 4 cut(s) | 1167, 2516, 3536, 7048 |
| HgaI | GACGC | 3 cut(s) | 5637, 6083, 6136 |
| HhaI | GCGC | 6 cut(s) | 1945, 2605, 2957, 3716, 3822, 6388 |
| Hin1I | GRCGYC | 4 cut(s) | 3244, 3855, 5635, 6386 |
| Hin6I | GCGC | 6 cut(s) | 1943, 2603, 2955, 3714, 3820, 6386 |
| HinP1I | GCGC | 6 cut(s) | 1943, 2603, 2955, 3714, 3820, 6386 |
| HincII | GTYRAC | 7 cut(s) | 3853, 4975, 5440, 6060, 6370, 7407, 8763 |
| HindII | GTYRAC | 7 cut(s) | 3853, 4975, 5440, 6060, 6370, 7407, 8763 |
| HindIII | AAGCTT | 6 cut(s) | 2922, 3062, 4181, 4504, 6212, 8198 |
| HpaII | CCGG | 4 cut(s) | 1167, 2516, 3536, 7048 |
| Hpy99I | CGWCG | 2 cut(s) | 3837, 5076 |
| Hsp92I | GRCGYC | 4 cut(s) | 3244, 3855, 5635, 6386 |
| HspAI | GCGC | 6 cut(s) | 1943, 2603, 2955, 3714, 3820, 6386 |
| KasI | GGCGCC | 1 cut(s) | 6385 |
| KpnI | GGTACC | 1 cut(s) | 7929 |
| Ksp22I | TGATCA | 4 cut(s) | 865, 2254, 3525, 7552 |
| LguI | GCTCTTC | 1 cut(s) | 3255 |
| MfeI | CAATTG | 4 cut(s) | 3953, 4681, 6584, 8592 |
| MflI | RGATCY | 8 cut(s) | 448, 698, 1578, 3839, 4853, 6188, 6200, 7563 |
| MlsI | TGGCCA | 2 cut(s) | 1438, 5147 |
| MluNI | TGGCCA | 2 cut(s) | 1438, 5147 |
| Mly113I | GGCGCC | 1 cut(s) | 6386 |
| MmeI | TCCRAC | 6 cut(s) | 891, 3012, 3400, 4861, 7067, 8238 |
| Mox20I | TGGCCA | 2 cut(s) | 1438, 5147 |
| Mph1103I | ATGCAT | 3 cut(s) | 5448, 6121, 6542 |
| MroXI | GAANNNNTTC | 6 cut(s) | 828, 3433, 4067, 5363, 5860, 6902 |
| MscI | TGGCCA | 2 cut(s) | 1438, 5147 |
| MslI | CAYNNNNRTG | 7 cut(s) | 238, 534, 1325, 3204, 4100, 5147, 7004 |
| Msp20I | TGGCCA | 2 cut(s) | 1438, 5147 |
| MspA1I | CMGCKG | 5 cut(s) | 38, 221, 3896, 6397, 8216 |
| MspCI | CTTAAG | 2 cut(s) | 5872, 7054 |
| MspI | CCGG | 4 cut(s) | 1167, 2516, 3536, 7048 |
| MunI | CAATTG | 4 cut(s) | 3953, 4681, 6584, 8592 |
| Mva1269I | GAATGC | 2 cut(s) | 3805, 6021 |
| NarI | GGCGCC | 1 cut(s) | 6386 |
| NciI | CCSGG | 4 cut(s) | 1167, 2517, 7048, 7049 |
| NcoI | CCATGG | 3 cut(s) | 5142, 5691, 8119 |
| NdeI | CATATG | 4 cut(s) | 3636, 5131, 7182, 7255 |
| NsiI | ATGCAT | 3 cut(s) | 5448, 6121, 6542 |
| PaeI | GCATGC | 1 cut(s) | 3794 |
| PaeR7I | CTCGAG | 1 cut(s) | 5883 |
| PagI | TCATGA | 1 cut(s) | 4090 |
| PciI | ACATGT | 5 cut(s) | 651, 903, 1285, 5608, 6286 |
| PciSI | GCTCTTC | 1 cut(s) | 3255 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 1395, 5071, 8449, 8710 |
| PctI | GAATGC | 2 cut(s) | 3805, 6021 |
| PdmI | GAANNNNTTC | 6 cut(s) | 828, 3433, 4067, 5363, 5860, 6902 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1525, 1660, 6069 |
| PfoI | TCCNGGA | 1 cut(s) | 3247 |
| PluTI | GGCGCC | 1 cut(s) | 6389 |
| Ppu21I | YACGTR | 1 cut(s) | 6866 |
| PpuMI | RGGWCCY | 5 cut(s) | 1992, 3091, 3966, 7644, 7669 |
| PscI | ACATGT | 5 cut(s) | 651, 903, 1285, 5608, 6286 |
| PshAI | GACNNNNGTC | 1 cut(s) | 8208 |
| PshBI | ATTAAT | 1 cut(s) | 7487 |
| PsiI | TTATAA | 3 cut(s) | 4406, 7730, 8348 |
| Psp124BI | GAGCTC | 1 cut(s) | 7701 |
| Psp1406I | AACGTT | 1 cut(s) | 3024 |
| Psp5II | RGGWCCY | 5 cut(s) | 1992, 3091, 3966, 7644, 7669 |
| PspEI | GGTNACC | 1 cut(s) | 7991 |
| PspFI | CCCAGC | 1 cut(s) | 1140 |
| PspOMI | GGGCCC | 1 cut(s) | 1472 |
| PspPPI | RGGWCCY | 5 cut(s) | 1992, 3091, 3966, 7644, 7669 |
| PstI | CTGCAG | 4 cut(s) | 1747, 1840, 7455, 8044 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1484, 1525, 2636, 4529, 8048 |
| PsuI | RGATCY | 8 cut(s) | 448, 698, 1578, 3839, 4853, 6188, 6200, 7563 |
| PvuII | CAGCTG | 4 cut(s) | 38, 221, 6397, 8216 |
| RseI | CAYNNNNRTG | 7 cut(s) | 238, 534, 1325, 3204, 4100, 5147, 7004 |
| SacI | GAGCTC | 1 cut(s) | 7701 |
| SalI | GTCGAC | 1 cut(s) | 5438 |
| SapI | GCTCTTC | 1 cut(s) | 3255 |
| ScaI | AGTACT | 4 cut(s) | 959, 2251, 4666, 7436 |
| SfoI | GGCGCC | 1 cut(s) | 6387 |
| Sfr274I | CTCGAG | 1 cut(s) | 5883 |
| SlaI | CTCGAG | 1 cut(s) | 5883 |
| SmaI | CCCGGG | 1 cut(s) | 7049 |
| SmiI | ATTTAAAT | 1 cut(s) | 7467 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 238, 534, 1325, 3204, 4100, 5147, 7004 |
| SmlI | CTYRAG | 8 cut(s) | 2521, 3002, 3129, 4899, 5872, 5883, 6566, 7054 |
| SmoI | CTYRAG | 8 cut(s) | 2521, 3002, 3129, 4899, 5872, 5883, 6566, 7054 |
| SphI | GCATGC | 1 cut(s) | 3794 |
| SspDI | GGCGCC | 1 cut(s) | 6385 |
| SstI | GAGCTC | 1 cut(s) | 7701 |
| StyI | CCWWGG | 6 cut(s) | 4333, 5142, 5691, 7996, 8119, 8430 |
| SwaI | ATTTAAAT | 1 cut(s) | 7467 |
| TauI | GCSGC | 3 cut(s) | 1634, 7192, 8742 |
| TspGWI | ACGGA | 4 cut(s) | 462, 2438, 5615, 6937 |
| TspMI | CCCGGG | 1 cut(s) | 7047 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1525, 1660, 6069 |
| Vha464I | CTTAAG | 2 cut(s) | 5872, 7054 |
| VneI | GTGCAC | 3 cut(s) | 1412, 2024, 7758 |
| VspI | ATTAAT | 1 cut(s) | 7487 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3086 |
| XhoI | CTCGAG | 1 cut(s) | 5883 |
| XmaI | CCCGGG | 1 cut(s) | 7047 |
| XmaJI | CCTAGG | 1 cut(s) | 7996 |
| XmiI | GTMKAC | 5 cut(s) | 3185, 4766, 5439, 7199, 7342 |
| XmnI | GAANNNNTTC | 6 cut(s) | 828, 3433, 4067, 5363, 5860, 6902 |
| ZraI | GACGTC | 3 cut(s) | 3245, 3856, 5636 |
| ZrmI | AGTACT | 4 cut(s) | 959, 2251, 4666, 7436 |
| Zsp2I | ATGCAT | 3 cut(s) | 5448, 6121, 6542 |