Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001555.1

Orthogroup ID

OG0004207

Physical Location & Seq

Genomic Coordinates Forward (+)

76347 .. 79297

Gene Structure 2951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001555.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

atgtttccgagcggcacaatccggcggaggctggccgctctgctgcgaccgtggcttcgggaagagccggaactcgagctcagtttggggctgatcagttcgcacgcggtggctaagaacctccggttcgataccgcggcgctcaatcggctcggcgacgattcggacgggtttttgtataaggcggtcagtgtcgaacagttgagcgttcggttctcgaactggctcgctcctgcattctcaattgagtttcatggcgtcaaggtggtgctctcgactcgggagttgaagaagaagaagaagaagctttctgaggatacatttgcagaggatatgaagaagaagaagctttctgagattgatcctcaggggagtgctgtgcatgcttttctggaaaagcttatggctacttctacgactccgaaaaataagttcaaaacatctcttttgaatctgttgctcacacactgtcagcttcaagtgcatgatattagtgtccaagtccaggttccgatcttaaatgattcgtttttctgttcactggatatagaagatataaatgtagatcctcagtatattgatcgtgggtgtcttcttcgaggcctttttggtacattctttgtacctatgaaggagagctcttttgctatagtaggcagtggttgtgaggttggttttaagagggcaggtcaactcaaacgtgtcttgttattgaccgagttgtgcagttgcattaagttgaatgattttcagcttgtagacatcaatcttcgagtccctgaaatacatttttcgttttctccggatgatgtttctttctatttggcattcactacagcatcatcccaagaatctcatcgtgctagagatggcagacaactgtggaagctagctgcgagtagaattgacaatatgacttcagctcataggtggtcgttgcaaaagtcagctgttgctgtttgtttctggttacgttatctaaatgcttatgagtatttactgttgctaattggatattatgacgaccacttattaaaaagatcagctattagaatctatgaggacaagatgctttttagttctgttgaaaaccaatggaaggtgatttctgatattgagaaagagctgccagctgaagctattgcacaggcatggagagtagcccgtaacagagcagcatcaaatgttcaatgtcccgaatatagttccaaaaaaccatttgtgactacaatttacaacttccttctcataatcctttcatttctagcttgtgcctggagatttttttgcaagatagtcctttttattatgcacccctttgtttttaggaaaatagtagtcaatgagccaaagagtgcagatctggatattgtttctgaaggtccgtgtacgcagttttgcttcagtttgatgcttggaaaagttcaaatcactatctctcatagaaatgaaattcaactcttagtaaatgaaaagttgaaatcacatcttgggatcacttactcggattcactttcatttcgtctttcagttgatgcactgttattaaaatatgtagaggacatgtgtgaagagtctttactgatatcctgtgggcaattaaaggtcagatcctcatctcttatggaagctcctgttaaagaaagcagttcaaaattatcctttagttctatggaagcacattggaaggagagcaatgataagtggaacaatattctgtggggtgagccagcagaaatatttccacttttagaaacttctgaaactggttgtgctgatcatgttgaaggttcttgtgtctcatttctgaaagacatgtggttggattggagaagtgagtgcgataaatttggaaaaagtgaaattcagtactctgaaactccattccttctttgtgaatttaaaaatttcttgatatatccagacctcaaaacatcggattctggtttttggaagttctattttgttctgggaaagttgaatcttgtgttgggatattcatcaatagtatctttgtctttgctatttaggcagatacaacataccctatgctggggagaggccaatggtcagtcacccggtctttcacattctccaagaaccagtgagagtaaaccagaaatcagtctggatagcaaatacaagtgctatgctaatagattagaaatggcattgcttaaaatgcttccaaaaaaacatgttcaactaggggtattcattgctggtcctcacatccttatgtcattaggaaataattttgatggtggcaacagagacaaaaatcatgtatatattcaggacgattttcacgttgcatttgatgtgcacaatattgaagctgctgtttggccaacctcaaagtttgatattgcatcattcgtggggccctcagcatctgatgatgtggaaccagagtgcctcaggatggaccagcctctggtgattgatatctctaactctaataatgggaagtatcaagctcagggtgagatctctcttggttcctacatacgagttgatggtttagatgtctgcctggttgccgcagcaggaaaacgacaaagccagattttggtttctaagccaatgactttgcagttgttatcctccaggttggatattcttctgatgctccgcattgtattcgctctcgtggagctttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SHR-BD VPS13_C

Protein Analysis

887

Amino Acids

100.48

Weight (kDa)

6.73

Isoelectric Point (pI)

43.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50380 AT3G50380 AT3G50380 AT3G50380
fragaria_vesca	FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_5g25081 FvH4_5g34340
malus_domestica	MD02G1159300.v1.1
prunus_persica	Prupe.7G144700_v2.0.a1 Prupe.7G144700_v2.0.a1 Prupe.7G144700_v2.0.a1
pyrus_communis	pycom02g12560
rosa_chinensis	RchiOBHm_Chr2g0103341
rosa_laevigata	RLG00000017225
rosa_multiflora	Rmu_sc0001555.1_g000014 Rmu_sc0009003.1_g000002 Rmu_sc0010053.1_g000008
rosa_roxburghii	Rroxscaffold_2G00139720
rosa_rugosa	Rorug02G0114000
rosa_samantha	Rh2AG162300 Rh2BG169400 Rh2CG169400 Rh2DG168200
rosa_wichuraiana	Rw0G019420 Rw2G012750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	677
AccB7I	CCANNNNNTGG	2 cut(s)	2437, 2572
AccBSI	CCGCTC	2 cut(s)	12, 38
AccI	GTMKAC	1 cut(s)	759
AccII	CGCG	2 cut(s)	107, 137
AccIII	TCCGGA	1 cut(s)	802
AciI	CCGC	9 cut(s)	12, 25, 36, 107, 135, 137, 185, 2544, 2635
AclWI	GGATC	4 cut(s)	356, 560, 1502, 1605
AcoI	YGGCCR	2 cut(s)	33, 2348
AcsI	RAATTY	5 cut(s)	1452, 1847, 1863, 1898, 1906
AcuI	CTGAAG	4 cut(s)	903, 1155, 1387, 1398
AcyI	GRCGYC	1 cut(s)	258
AdeI	CACNNNGTG	1 cut(s)	109
AfaI	GTAC	4 cut(s)	613, 624, 1390, 1871
AfiI	CCNNNNNNNGG	7 cut(s)	505, 1099, 2052, 2053, 2425, 2437, 2572
AflIII	ACRYGT	4 cut(s)	700, 1563, 1815, 2197
AjnI	CCWGG	4 cut(s)	504, 1274, 2535, 2609
AjuI	GAANNNNNNNTTGG	4 cut(s)	492, 524, 1973, 2005
Alw21I	GWGCWC	4 cut(s)	81, 273, 641, 2328
Alw26I	GTCTC	2 cut(s)	1804, 2268
Alw44I	GTGCAC	1 cut(s)	2324
AlwI	GGATC	4 cut(s)	356, 560, 1502, 1605
AlwNI	CAGNNNCTG	2 cut(s)	2396, 2437
Ama87I	CYCGRG	2 cut(s)	74, 279
Aor13HI	TCCGGA	1 cut(s)	802
AoxI	GGCC	5 cut(s)	33, 601, 2061, 2348, 2384
ApaI	GGGCCC	1 cut(s)	2388
ApaLI	GTGCAC	1 cut(s)	2324
ApeKI	GCWGC	6 cut(s)	43, 893, 1126, 1175, 2339, 2546
ApoI	RAATTY	5 cut(s)	1452, 1847, 1863, 1898, 1906
ArsI	GACNNNNNNTTYG	2 cut(s)	39, 71
Asp700I	GAANNNNTTC	1 cut(s)	1740
AspLEI	GCGC	1 cut(s)	142
AspS9I	GGNCC	5 cut(s)	1382, 2225, 2384, 2385, 2428
AsuC2I	CCSGG	1 cut(s)	2079
AsuHPI	GGTGA	5 cut(s)	1114, 1736, 2067, 2452, 2498
AsuNHI	GCTAGC	1 cut(s)	889
AvaI	CYCGRG	2 cut(s)	74, 279
AvaII	GGWCC	3 cut(s)	1382, 2225, 2428
AxyI	CCTNAGG	2 cut(s)	366, 2420
BaeGI	GKGCMC	2 cut(s)	2328, 2388
BalI	TGGCCA	1 cut(s)	2350
BanII	GRGCYC	3 cut(s)	81, 641, 2388
BarI	GAAGNNNNNNTAC	2 cut(s)	1563, 1595
BauI	CACGAG	1 cut(s)	2651
BbsI	GAAGAC	1 cut(s)	584
Bbv12I	GWGCWC	4 cut(s)	81, 273, 641, 2328
BbvCI	CCTCAGC	1 cut(s)	2389
BbvI	GCAGC	6 cut(s)	30, 880, 1113, 1187, 2326, 2558
BccI	CCATC	4 cut(s)	863, 2255, 2419, 2513
BcgI	CGANNNNNNTGC	2 cut(s)	2626, 2660
BciT130I	CCWGG	4 cut(s)	506, 1276, 2537, 2611
BciVI	GTATCC	1 cut(s)	310
BclI	TGATCA	2 cut(s)	93, 1777
BcnI	CCSGG	1 cut(s)	2079
BcoDI	GTCTC	2 cut(s)	1804, 2268
BfaI	CTAG	4 cut(s)	864, 890, 1265, 2207
BfmI	CTRYAG	2 cut(s)	648, 834
BfoI	RGCGCY	1 cut(s)	143
BfuAI	ACCTGC	1 cut(s)	677
BfuI	GTATCC	1 cut(s)	310
BglII	AGATCT	2 cut(s)	1360, 2490
BmcAI	AGTACT	1 cut(s)	1871
Bme1390I	CCNGG	5 cut(s)	506, 1276, 2079, 2537, 2611
Bme18I	GGWCC	3 cut(s)	1382, 2225, 2428
BmeT110I	CYCGRG	2 cut(s)	74, 279
BmgT120I	GGNCC	5 cut(s)	1382, 2225, 2384, 2385, 2428
BmiI	GGNNCC	5 cut(s)	510, 2385, 2386, 2409, 2503
BmrFI	CCNGG	5 cut(s)	506, 1276, 2079, 2537, 2611
BmsI	GCATC	8 cut(s)	848, 1059, 1187, 1401, 1525, 2381, 2402, 2619
BmtI	GCTAGC	1 cut(s)	893
BpiI	GAAGAC	1 cut(s)	584
BpmI	CTGGAG	2 cut(s)	1297, 2593
Bpu10I	CCTNAGC	2 cut(s)	2389, 2481
BpuMI	CCSGG	1 cut(s)	2079
BsaBI	GATNNNNATC	3 cut(s)	1615, 1999, 2447
BsaHI	GRCGYC	1 cut(s)	258
BsaJI	CCNNGG	2 cut(s)	50, 135
BsaWI	WCCGGW	2 cut(s)	123, 802
Bsc4I	CCNNNNNNNGG	7 cut(s)	505, 1099, 2052, 2053, 2425, 2437, 2572
Bse1I	ACTGG	4 cut(s)	227, 546, 1771, 2103
Bse21I	CCTNAGG	2 cut(s)	366, 2420
Bse3DI	GCAATG	3 cut(s)	1702, 2171, 2217
Bse8I	GATNNNNATC	3 cut(s)	1615, 1999, 2447
BseAI	TCCGGA	1 cut(s)	802
BseBI	CCWGG	4 cut(s)	506, 1276, 2537, 2611
BseDI	CCNNGG	2 cut(s)	50, 135
BseGI	GGATG	4 cut(s)	811, 842, 2232, 2430
BseJI	GATNNNNATC	3 cut(s)	1615, 1999, 2447
BseLI	CCNNNNNNNGG	7 cut(s)	505, 1099, 2052, 2053, 2425, 2437, 2572
BseMI	GCAATG	3 cut(s)	1702, 2171, 2217
BseMII	CTCAG	8 cut(s)	94, 303, 345, 380, 584, 2403, 2434, 2495
BseNI	ACTGG	4 cut(s)	227, 546, 1771, 2103
BseSI	GKGCMC	2 cut(s)	2328, 2388
BseXI	GCAGC	6 cut(s)	30, 880, 1113, 1187, 2326, 2558
BseYI	CCCAGC	1 cut(s)	2052
BsgI	GTGCAG	2 cut(s)	745, 1377
Bsh1236I	CGCG	2 cut(s)	107, 137
Bsh1285I	CGRYCG	1 cut(s)	50
BshFI	GGCC	5 cut(s)	35, 603, 2063, 2350, 2386
BsiEI	CGRYCG	1 cut(s)	50
BsiHKAI	GWGCWC	4 cut(s)	81, 273, 641, 2328
BsiHKCI	CYCGRG	2 cut(s)	74, 279
BsiSI	CCGG	5 cut(s)	22, 68, 124, 803, 2079
BslFI	GGGAC	2 cut(s)	761, 1179
BslI	CCNNNNNNNGG	7 cut(s)	505, 1099, 2052, 2053, 2425, 2437, 2572
BsmAI	GTCTC	2 cut(s)	1804, 2268
BsmFI	GGGAC	2 cut(s)	761, 1179
BsmI	GAATGC	2 cut(s)	236, 827
BsnI	GGCC	5 cut(s)	35, 603, 2063, 2350, 2386
BsoBI	CYCGRG	2 cut(s)	74, 279
Bsp120I	GGGCCC	1 cut(s)	2384
Bsp1286I	GDGCHC	5 cut(s)	81, 273, 641, 2328, 2388
Bsp13I	TCCGGA	1 cut(s)	802
BspACI	CCGC	9 cut(s)	12, 25, 36, 107, 135, 137, 185, 2544, 2635
BspANI	GGCC	5 cut(s)	35, 603, 2063, 2350, 2386
BspCNI	CTCAG	8 cut(s)	93, 304, 346, 379, 583, 2402, 2433, 2494
BspEI	TCCGGA	1 cut(s)	802
BspFNI	CGCG	2 cut(s)	107, 137
BspLI	GGNNCC	5 cut(s)	510, 2385, 2386, 2409, 2503
BspMI	ACCTGC	1 cut(s)	677
BspOI	GCTAGC	1 cut(s)	893
BspPI	GGATC	4 cut(s)	356, 560, 1502, 1605
BspQI	GCTCTTC	1 cut(s)	57
BsrBI	CCGCTC	2 cut(s)	12, 38
BsrDI	GCAATG	3 cut(s)	1702, 2171, 2217
BsrI	ACTGG	4 cut(s)	227, 546, 1771, 2103
BssECI	CCNNGG	2 cut(s)	50, 135
BssNI	GRCGYC	1 cut(s)	258
BssSI	CACGAG	1 cut(s)	2651
Bst2BI	CACGAG	1 cut(s)	2651
Bst2UI	CCWGG	4 cut(s)	506, 1276, 2537, 2611
Bst4CI	ACNGT	6 cut(s)	51, 201, 470, 882, 1002, 1542
Bst6I	CTCTTC	2 cut(s)	57, 1566
BstACI	GRCGYC	1 cut(s)	258
BstC8I	GCNNGC	7 cut(s)	33, 105, 228, 384, 891, 1131, 1731
BstDSI	CCRYGG	2 cut(s)	50, 135
BstF5I	GGATG	4 cut(s)	811, 842, 2232, 2430
BstFNI	CGCG	2 cut(s)	107, 137
BstH2I	RGCGCY	1 cut(s)	143
BstHHI	GCGC	1 cut(s)	142
BstMAI	GTCTC	2 cut(s)	1804, 2268
BstMCI	CGRYCG	1 cut(s)	50
BstMWI	GCNNNNNNNGC	6 cut(s)	52, 148, 383, 481, 2029, 2182
BstNI	CCWGG	4 cut(s)	506, 1276, 2537, 2611
BstNSI	RCATGY	4 cut(s)	386, 1567, 1819, 2201
BstSCI	CCNGG	5 cut(s)	504, 1274, 2077, 2535, 2609
BstSFI	CTRYAG	2 cut(s)	648, 834
BstSLI	GKGCMC	2 cut(s)	2328, 2388
BstUI	CGCG	2 cut(s)	107, 137
BstV1I	GCAGC	6 cut(s)	30, 880, 1113, 1187, 2326, 2558
BstV2I	GAAGAC	1 cut(s)	584
BstX2I	RGATCY	4 cut(s)	565, 1360, 1610, 2490
BstYI	RGATCY	4 cut(s)	565, 1360, 1610, 2490
Bsu36I	CCTNAGG	2 cut(s)	366, 2420
BsuI	GTATCC	1 cut(s)	310
BsuRI	GGCC	5 cut(s)	35, 603, 2063, 2350, 2386
BtgI	CCRYGG	2 cut(s)	50, 135
BtsCI	GGATG	4 cut(s)	811, 842, 2232, 2430
BtsI	GCAGTG	1 cut(s)	664
BtsIMutI	CAGTG	6 cut(s)	196, 466, 539, 664, 1538, 2110
BveI	ACCTGC	1 cut(s)	677
Cac8I	GCNNGC	7 cut(s)	33, 105, 228, 384, 891, 1131, 1731
CaiI	CAGNNNCTG	2 cut(s)	2396, 2437
CfoI	GCGC	1 cut(s)	142
Cfr13I	GGNCC	5 cut(s)	1382, 2225, 2384, 2385, 2428
Cfr42I	CCGCGG	1 cut(s)	138
CseI	GACGC	1 cut(s)	247
Csp6I	GTAC	4 cut(s)	612, 623, 1389, 1870
CviAII	CATG	9 cut(s)	254, 383, 485, 1152, 1564, 1781, 1816, 2198, 2285
CviQI	GTAC	4 cut(s)	612, 623, 1389, 1870
DraI	TTTAAA	1 cut(s)	1903
DraIII	CACNNNGTG	1 cut(s)	109
EaeI	YGGCCR	2 cut(s)	33, 2348
Eam1104I	CTCTTC	2 cut(s)	57, 1566
EarI	CTCTTC	2 cut(s)	57, 1566
EciI	GGCGGA	1 cut(s)	40
Ecl136II	GAGCTC	2 cut(s)	79, 639
Eco147I	AGGCCT	1 cut(s)	603
Eco24I	GRGCYC	3 cut(s)	81, 641, 2388
Eco32I	GATATC	2 cut(s)	1587, 2449
Eco47I	GGWCC	3 cut(s)	1382, 2225, 2428
Eco53kI	GAGCTC	2 cut(s)	79, 639
Eco57I	CTGAAG	4 cut(s)	903, 1155, 1387, 1398
Eco81I	CCTNAGG	2 cut(s)	366, 2420
Eco88I	CYCGRG	2 cut(s)	74, 279
EcoICRI	GAGCTC	2 cut(s)	79, 639
EcoO109I	RGGNCCY	2 cut(s)	2384, 2385
EcoRII	CCWGG	4 cut(s)	504, 1274, 2535, 2609
EcoRV	GATATC	2 cut(s)	1587, 2449
EcoT38I	GRGCYC	3 cut(s)	81, 641, 2388
FaeI	CATG	9 cut(s)	257, 386, 488, 1155, 1567, 1784, 1819, 2201, 2288
FaqI	GGGAC	2 cut(s)	761, 1179
FatI	CATG	9 cut(s)	253, 382, 484, 1151, 1563, 1780, 1815, 2197, 2284
FbaI	TGATCA	2 cut(s)	93, 1777
FblI	GTMKAC	1 cut(s)	759
FokI	GGATG	4 cut(s)	818, 829, 2219, 2437
FriOI	GRGCYC	3 cut(s)	81, 641, 2388
FspBI	CTAG	4 cut(s)	864, 890, 1265, 2207
GlaI	GCGC	1 cut(s)	141
GsaI	CCCAGC	1 cut(s)	2056
GsuI	CTGGAG	2 cut(s)	1297, 2593
HaeII	RGCGCY	1 cut(s)	143
HaeIII	GGCC	5 cut(s)	35, 603, 2063, 2350, 2386
HapII	CCGG	5 cut(s)	22, 68, 124, 803, 2079
HgaI	GACGC	1 cut(s)	247
HhaI	GCGC	1 cut(s)	142
Hin1I	GRCGYC	1 cut(s)	258
Hin1II	CATG	9 cut(s)	257, 386, 488, 1155, 1567, 1784, 1819, 2201, 2288
Hin6I	GCGC	1 cut(s)	140
HinP1I	GCGC	1 cut(s)	140
HincII	GTYRAC	1 cut(s)	692
HindII	GTYRAC	1 cut(s)	692
HindIII	AAGCTT	3 cut(s)	305, 347, 398
HpaII	CCGG	5 cut(s)	22, 68, 124, 803, 2079
HphI	GGTGA	5 cut(s)	1114, 1736, 2067, 2452, 2498
Hpy166II	GTNNAC	6 cut(s)	539, 692, 760, 1389, 2114, 2326
Hpy8I	GTNNAC	6 cut(s)	539, 692, 760, 1389, 2114, 2326
Hpy99I	CGWCG	1 cut(s)	161
HpyAV	CCTTC	7 cut(s)	625, 1093, 1253, 1373, 1681, 1781, 1898
HpyCH4III	ACNGT	6 cut(s)	51, 201, 470, 882, 1002, 1542
HpyCH4IV	ACGT	3 cut(s)	700, 973, 2310
HpyF10VI	GCNNNNNNNGC	6 cut(s)	52, 148, 383, 481, 2029, 2182
HpySE526I	ACGT	3 cut(s)	700, 973, 2310
Hsp92I	GRCGYC	1 cut(s)	258
Hsp92II	CATG	9 cut(s)	257, 386, 488, 1155, 1567, 1784, 1819, 2201, 2288
HspAI	GCGC	1 cut(s)	140
Kpn2I	TCCGGA	1 cut(s)	802
Ksp22I	TGATCA	2 cut(s)	93, 1777
KspI	CCGCGG	1 cut(s)	138
LguI	GCTCTTC	1 cut(s)	57
LmnI	GCTCC	4 cut(s)	235, 1636, 2637, 2656
Lsp1109I	GCAGC	6 cut(s)	30, 880, 1113, 1187, 2326, 2558
LweI	GCATC	8 cut(s)	848, 1059, 1187, 1401, 1525, 2381, 2402, 2619
MaeI	CTAG	4 cut(s)	864, 890, 1265, 2207
MaeII	ACGT	3 cut(s)	700, 973, 2310
MaeIII	GTNAC	4 cut(s)	969, 1166, 1222, 2073
MbiI	CCGCTC	2 cut(s)	12, 38
MfeI	CAATTG	1 cut(s)	243
MflI	RGATCY	4 cut(s)	565, 1360, 1610, 2490
MhlI	GDGCHC	5 cut(s)	81, 273, 641, 2328, 2388
MlsI	TGGCCA	1 cut(s)	2350
MluNI	TGGCCA	1 cut(s)	2350
MlyI	GAGTC	4 cut(s)	271, 412, 783, 1583
MmeI	TCCRAC	2 cut(s)	1803, 2595
Mox20I	TGGCCA	1 cut(s)	2350
MroI	TCCGGA	1 cut(s)	802
MroXI	GAANNNNTTC	1 cut(s)	1740
MscI	TGGCCA	1 cut(s)	2350
MseI	TTAA	9 cut(s)	518, 678, 735, 1034, 1547, 1601, 1638, 1902, 2178
MslI	CAYNNNNRTG	3 cut(s)	1150, 1446, 2237
Msp20I	TGGCCA	1 cut(s)	2350
MspA1I	CMGCKG	3 cut(s)	137, 950, 1133
MspI	CCGG	5 cut(s)	22, 68, 124, 803, 2079
MspR9I	CCNGG	5 cut(s)	506, 1276, 2079, 2537, 2611
MunI	CAATTG	1 cut(s)	243
Mva1269I	GAATGC	2 cut(s)	236, 827
MvaI	CCWGG	4 cut(s)	506, 1276, 2537, 2611
MvnI	CGCG	2 cut(s)	107, 137
MwoI	GCNNNNNNNGC	6 cut(s)	52, 148, 383, 481, 2029, 2182
NciI	CCSGG	1 cut(s)	2079
NheI	GCTAGC	1 cut(s)	889
NlaIII	CATG	9 cut(s)	257, 386, 488, 1155, 1567, 1784, 1819, 2201, 2288
NlaIV	GGNNCC	5 cut(s)	510, 2385, 2386, 2409, 2503
NmeAIII	GCCGAG	1 cut(s)	132
NmuCI	GTSAC	2 cut(s)	1222, 2073
NspI	RCATGY	4 cut(s)	386, 1567, 1819, 2201
PaeI	GCATGC	1 cut(s)	386
PaeR7I	CTCGAG	1 cut(s)	74
PceI	AGGCCT	1 cut(s)	603
PciI	ACATGT	3 cut(s)	1563, 1815, 2197
PciSI	GCTCTTC	1 cut(s)	57
PcsI	WCGNNNNNNNCGW	1 cut(s)	2307
PctI	GAATGC	2 cut(s)	236, 827
PdmI	GAANNNNTTC	1 cut(s)	1740
PfeI	GAWTC	8 cut(s)	161, 451, 524, 851, 1053, 1508, 1940, 1981
PflMI	CCANNNNNTGG	2 cut(s)	2437, 2572
PleI	GAGTC	4 cut(s)	271, 412, 782, 1582
PpsI	GAGTC	4 cut(s)	271, 412, 782, 1582
PscI	ACATGT	3 cut(s)	1563, 1815, 2197
Psp124BI	GAGCTC	2 cut(s)	81, 641
Psp6I	CCWGG	4 cut(s)	504, 1274, 2535, 2609
PspFI	CCCAGC	1 cut(s)	2052
PspGI	CCWGG	4 cut(s)	504, 1274, 2535, 2609
PspN4I	GGNNCC	5 cut(s)	510, 2385, 2386, 2409, 2503
PspOMI	GGGCCC	1 cut(s)	2384
PspPI	GGNCC	5 cut(s)	1382, 2225, 2384, 2385, 2428
PspXI	VCTCGAGB	1 cut(s)	74
PstNI	CAGNNNCTG	2 cut(s)	2396, 2437
PsuI	RGATCY	4 cut(s)	565, 1360, 1610, 2490
PvuII	CAGCTG	2 cut(s)	950, 1133
RsaI	GTAC	4 cut(s)	613, 624, 1390, 1871
RsaNI	GTAC	4 cut(s)	612, 623, 1389, 1870
RseI	CAYNNNNRTG	3 cut(s)	1150, 1446, 2237
SacI	GAGCTC	2 cut(s)	81, 641
SacII	CCGCGG	1 cut(s)	138
SapI	GCTCTTC	1 cut(s)	57
SaqAI	TTAA	9 cut(s)	518, 678, 735, 1034, 1547, 1601, 1638, 1902, 2178
Sau96I	GGNCC	5 cut(s)	1382, 2225, 2384, 2385, 2428
ScaI	AGTACT	1 cut(s)	1871
SchI	GAGTC	4 cut(s)	271, 412, 783, 1583
ScrFI	CCNGG	5 cut(s)	506, 1276, 2079, 2537, 2611
SduI	GDGCHC	5 cut(s)	81, 273, 641, 2328, 2388
SfaNI	GCATC	8 cut(s)	848, 1059, 1187, 1401, 1525, 2381, 2402, 2619
SfcI	CTRYAG	2 cut(s)	648, 834
Sfr274I	CTCGAG	1 cut(s)	74
Sfr303I	CCGCGG	1 cut(s)	138
SgrBI	CCGCGG	1 cut(s)	138
SinI	GGWCC	3 cut(s)	1382, 2225, 2428
SlaI	CTCGAG	1 cut(s)	74
SmiMI	CAYNNNNRTG	3 cut(s)	1150, 1446, 2237
SmlI	CTYRAG	1 cut(s)	74
SmoI	CTYRAG	1 cut(s)	74
SphI	GCATGC	1 cut(s)	386
SseBI	AGGCCT	1 cut(s)	603
SsiI	CCGC	9 cut(s)	12, 25, 36, 107, 135, 137, 185, 2544, 2635
SspI	AATATT	3 cut(s)	1714, 1740, 2332
SspMI	CTAG	4 cut(s)	864, 890, 1265, 2207
SstI	GAGCTC	2 cut(s)	81, 641
StuI	AGGCCT	1 cut(s)	603
StyD4I	CCNGG	5 cut(s)	504, 1274, 2077, 2535, 2609
TaaI	ACNGT	6 cut(s)	51, 201, 470, 882, 1002, 1542
TaiI	ACGT	3 cut(s)	703, 976, 2313
TaqI	TCGA	7 cut(s)	75, 129, 195, 218, 275, 598, 772
TaqII	GACCGA	1 cut(s)	731
TatI	WGTACW	1 cut(s)	1869
TauI	GCSGC	4 cut(s)	15, 38, 140, 2546
TfiI	GAWTC	8 cut(s)	161, 451, 524, 851, 1053, 1508, 1940, 1981
Tru1I	TTAA	9 cut(s)	518, 678, 735, 1034, 1547, 1601, 1638, 1902, 2178
Tru9I	TTAA	9 cut(s)	518, 678, 735, 1034, 1547, 1601, 1638, 1902, 2178
TscAI	CASTG	6 cut(s)	196, 473, 546, 664, 1545, 2110
TseFI	GTSAC	2 cut(s)	1222, 2073
TseI	GCWGC	6 cut(s)	43, 893, 1126, 1175, 2339, 2546
Tsp45I	GTSAC	2 cut(s)	1222, 2073
TspDTI	ATGAA	9 cut(s)	242, 350, 644, 1248, 1464, 1485, 1506, 1989, 2206
TspGWI	ACGGA	1 cut(s)	1374
TspRI	CASTG	6 cut(s)	196, 473, 546, 664, 1545, 2110
Van91I	CCANNNNNTGG	2 cut(s)	2437, 2572
VneI	GTGCAC	1 cut(s)	2324
VpaK11BI	GGWCC	3 cut(s)	1382, 2225, 2428
XapI	RAATTY	5 cut(s)	1452, 1847, 1863, 1898, 1906
XceI	RCATGY	4 cut(s)	386, 1567, 1819, 2201
XhoI	CTCGAG	1 cut(s)	74
XmiI	GTMKAC	1 cut(s)	759
XmnI	GAANNNNTTC	1 cut(s)	1740
XspI	CTAG	4 cut(s)	864, 890, 1265, 2207
ZrmI	AGTACT	1 cut(s)	1871

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.