Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010053.1

Orthogroup ID

OG0004207

Physical Location & Seq

Genomic Coordinates Reverse (-)

28988 .. 34840

Gene Structure 5853 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010053.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

atgatccccgtcaacagtaaacagagggcgcctctacagctgtggaatgtgatagacaagaagagagatgtcagtttgtttgagcgtgttatgaaaaagcacagaaaagctaatgatgattcaccaatatatctccagtttcgattgaatgagtctaagttaggttggtcggggccagtatgcattgcttctctaggaagatttttcctcaagttcaaaaggcagcaattggaccaagtgacagcactagaaagcaatgtaacagaattcgcttctgttcatcttgttgaagaaggctctactcttggtttacacttccataaacctccaaatgtcagtctcccataccgaattgagaattgcttgcctgatgtgtcgataacttactaccagaaggattcatcagagccagagattattgcatcagaaagttgcactgattatgtttgggatgatttgactcttccacataagttggtcgtcaggatcaatgatagtcttctactacgtgaaattaacttggataaggtgagagcatggaagcctttctacaaaaccaggcaacggagtggattggcaactcatttaccatttggaaaagactcgggggacaagaagggtgattttggtgagtttaatggcatggagatgatgaaggatggagaagatatggagccgcctgggtatacaccaatcttagctgcaagaattgggaatattaactttgattcggtctttacatatgagcaaaagtttagccagatcagtgtacagtcattgaatttggagaacaagtgggtgggtgctccttttgcagcaatgcttcgtagacatcaatcagacttcgatgattcaaatgattgtgtactcaaaattgtcattgtcttgctgtcaaccagttccaatgttgtacaagttaagtactcgtctattgctctgcagccaatggatttaaatcttgatgaggagacattaatgaaaattgtcccattttggagaacatctcttagtgaggcgaagagtagccagtattattttgatcattttgagatccatccgataaagattattgcaaactttcttcctggcgagtcatattcaagttatagctcaactgaggagactctaaggtccttgctgcacagtgtagttaaggtccctgcgataaaaaataaggttgtagagctcaatggtgttatggtcactcatgctcttataacgatgcgtgaattacttatcaaatgtgcacaacattattcatggtatgccatgagggctatatatattgcaaagggaagtccattgcttccaccagattttgtgtcaatttttgatgacttggcttcttcgtctcttgatgtcttctttgatccttctcgtgcattagtgactcttccaggtttgactttaggtaccttcaagttaatcagtaaatgtatcgatggtaaaggattcttggggacaaaacggtattttggtgacctaggaaaatctttgaggacggcagggtcaaatgtattgtttgctgcagtcactgaaatatcagactctattctgaaaggagcagaagcaagtggttttgatggagtggtcacgggctttcaccatggaatattgaaattggctatggagccatcattattgggaactgctttgatggaaggtggcccagatagaaagattaagcttgaccgcagtccagctgttgatgagttatatatcgaaggatacttgcaagcgatgttggatacgatgtatagacaagaatatttgagagtcagagtcatcgagaatcaggtttacctcaaaaacctgccccccaacagttcccttataaacgagattatggatcgtgtgaaggggtttcttgtgagcaagtcacttctgaaaggagacccctcaataacatctcgccccttgggtcatcttcgaggtgaacgtgagtggagaatcggcccaactgtgctgacattaggtgagcatctattcgtgagtttcgcaatccgaatcctgcggaagcaagctaacaagtgcatcgccaacatcaagtggaagccagagagcgatggtggtcgatcaattgtccctgcaagctcctcggaagaagcggtgaagggtaagttcatttggaaatggggaagtgggattggcaagtttgttttgtcagccatagtagcatatatagatggacggttatgtcgttctattcctaatcctgtagctcgccgcatcgttagtggctttctgttgactttccttgataacaacaacagcaatgaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SHR-BD VPS13_C

Protein Analysis

760

Amino Acids

85.36

Weight (kDa)

8.68

Isoelectric Point (pI)

43.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50380 AT3G50380 AT3G50380 AT3G50380
fragaria_vesca	FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_5g25081 FvH4_5g34340
malus_domestica	MD02G1159300.v1.1
prunus_persica	Prupe.7G144700_v2.0.a1 Prupe.7G144700_v2.0.a1 Prupe.7G144700_v2.0.a1
pyrus_communis	pycom02g12560
rosa_chinensis	RchiOBHm_Chr2g0103341
rosa_laevigata	RLG00000017225
rosa_multiflora	Rmu_sc0001555.1_g000014 Rmu_sc0009003.1_g000002 Rmu_sc0010053.1_g000008
rosa_roxburghii	Rroxscaffold_2G00139720
rosa_rugosa	Rorug02G0114000
rosa_samantha	Rh2AG162300 Rh2BG169400 Rh2CG169400 Rh2DG168200
rosa_wichuraiana	Rw0G019420 Rw2G012750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1217, 1835
AasI	GACNNNNNNGTC	3 cut(s)	1129, 1507, 2196
Acc36I	ACCTGC	1 cut(s)	1821
Acc65I	GGTACC	1 cut(s)	1412
AccB1I	GGYRCC	2 cut(s)	28, 1412
AccI	GTMKAC	2 cut(s)	686, 829
AciI	CCGC	5 cut(s)	677, 1693, 2014, 2108, 2227
AclWI	GGATC	4 cut(s)	494, 1045, 1364, 1857
AcsI	RAATTY	2 cut(s)	266, 781
AcyI	GRCGYC	1 cut(s)	29
AfaI	GTAC	5 cut(s)	771, 867, 912, 923, 1414
AfiI	CCNNNNNNNGG	1 cut(s)	564
AgsI	TTSAA	8 cut(s)	148, 217, 290, 781, 855, 1101, 1420, 1618
AjnI	CCWGG	4 cut(s)	557, 679, 1084, 1396
Alw21I	GWGCWC	3 cut(s)	808, 1188, 1249
Alw26I	GTCTC	5 cut(s)	344, 962, 1115, 1356, 1887
Alw44I	GTGCAC	1 cut(s)	1245
AlwI	GGATC	4 cut(s)	494, 1045, 1364, 1857
AlwNI	CAGNNNCTG	1 cut(s)	1535
Ama87I	CYCGRG	1 cut(s)	604
AoxI	GGCC	3 cut(s)	173, 1666, 1954
ApaLI	GTGCAC	1 cut(s)	1245
ApeKI	GCWGC	6 cut(s)	223, 701, 815, 940, 1138, 1526
ApoI	RAATTY	2 cut(s)	266, 781
AseI	ATTAAT	1 cut(s)	974
Asp700I	GAANNNNTTC	1 cut(s)	545
Asp718I	GGTACC	1 cut(s)	1412
AspA2I	CCTAGG	1 cut(s)	1483
AspLEI	GCGC	1 cut(s)	31
AspS9I	GGNCC	6 cut(s)	173, 232, 1131, 1156, 1667, 1955
AsuHPI	GGTGA	9 cut(s)	114, 541, 632, 641, 1490, 1595, 1946, 1988, 2122
AvaI	CYCGRG	1 cut(s)	604
AvaII	GGWCC	3 cut(s)	232, 1131, 1156
AvrII	CCTAGG	1 cut(s)	1483
BaeGI	GKGCMC	1 cut(s)	1249
BanI	GGYRCC	2 cut(s)	28, 1412
BanII	GRGCYC	1 cut(s)	1188
BarI	GAAGNNNNNNTAC	2 cut(s)	533, 565
BauI	CACGAG	1 cut(s)	1377
BbsI	GAAGAC	2 cut(s)	491, 1354
Bbv12I	GWGCWC	3 cut(s)	808, 1188, 1249
BbvI	GCAGC	6 cut(s)	235, 688, 827, 952, 1125, 1513
BccI	CCATC	8 cut(s)	653, 1062, 1436, 1577, 1642, 1651, 2060, 2180
BceAI	ACGGC	1 cut(s)	1518
BcgI	CGANNNNNNTGC	2 cut(s)	2079, 2113
BciT130I	CCWGG	4 cut(s)	559, 681, 1086, 1398
BciVI	GTATCC	2 cut(s)	1721, 1741
BclI	TGATCA	1 cut(s)	1039
BcoDI	GTCTC	5 cut(s)	344, 962, 1115, 1356, 1887
BfaI	CTAG	3 cut(s)	194, 248, 1484
BfmI	CTRYAG	4 cut(s)	35, 938, 1527, 2217
BfoI	RGCGCY	1 cut(s)	32
BfuAI	ACCTGC	1 cut(s)	1821
BfuI	GTATCC	2 cut(s)	1721, 1741
BglI	GCCNNNNNGGC	1 cut(s)	1274
BisI	GCNGC	8 cut(s)	224, 677, 702, 816, 941, 1139, 1527, 2227
BlnI	CCTAGG	1 cut(s)	1483
BlsI	GCNGC	8 cut(s)	225, 678, 703, 817, 942, 1140, 1528, 2228
BmcAI	AGTACT	1 cut(s)	923
Bme1390I	CCNGG	4 cut(s)	559, 681, 1086, 1398
Bme18I	GGWCC	3 cut(s)	232, 1131, 1156
BmeT110I	CYCGRG	1 cut(s)	604
BmgT120I	GGNCC	6 cut(s)	173, 232, 1131, 1156, 1667, 1955
BmiI	GGNNCC	6 cut(s)	30, 174, 675, 1158, 1414, 1632
BmrFI	CCNGG	4 cut(s)	559, 681, 1086, 1398
BmsI	GCATC	5 cut(s)	431, 1212, 1990, 2043, 2238
BoxI	GACNNNNGTC	1 cut(s)	1695
BpiI	GAAGAC	2 cut(s)	491, 1354
BplI	GAGNNNNNCTC	4 cut(s)	16, 48, 988, 1020
BpmI	CTGGAG	1 cut(s)	119
BpuEI	CTTGAG	1 cut(s)	194
Bsa29I	ATCGAT	1 cut(s)	1440
BsaAI	YACGTR	1 cut(s)	509
BsaBI	GATNNNNATC	1 cut(s)	954
BsaHI	GRCGYC	1 cut(s)	29
BsaI	GGTCTC	1 cut(s)	1887
BsaJI	CCNNGG	5 cut(s)	680, 1483, 1606, 1917, 2097
BsaXI	ACNNNNNCTCC	2 cut(s)	779, 809
Bsc4I	CCNNNNNNNGG	1 cut(s)	564
Bse1I	ACTGG	4 cut(s)	136, 176, 897, 1027
Bse3DI	GCAATG	5 cut(s)	183, 262, 825, 1301, 2281
Bse8I	GATNNNNATC	1 cut(s)	954
BseBI	CCWGG	4 cut(s)	559, 681, 1086, 1398
BseCI	ATCGAT	1 cut(s)	1440
BseDI	CCNNGG	5 cut(s)	680, 1483, 1606, 1917, 2097
BseGI	GGATG	3 cut(s)	457, 664, 1054
BseJI	GATNNNNATC	1 cut(s)	954
BseLI	CCNNNNNNNGG	1 cut(s)	564
BseMI	GCAATG	5 cut(s)	183, 262, 825, 1301, 2281
BseMII	CTCAG	1 cut(s)	1107
BseNI	ACTGG	4 cut(s)	136, 176, 897, 1027
BseRI	GAGGAG	3 cut(s)	980, 1133, 2086
BseSI	GKGCMC	1 cut(s)	1249
BseXI	GCAGC	6 cut(s)	235, 688, 827, 952, 1125, 1513
BsgI	GTGCAG	1 cut(s)	1124
BshFI	GGCC	3 cut(s)	175, 1668, 1956
BshNI	GGYRCC	2 cut(s)	28, 1412
BshVI	ATCGAT	1 cut(s)	1440
BsiHKAI	GWGCWC	3 cut(s)	808, 1188, 1249
BsiHKCI	CYCGRG	1 cut(s)	604
BslFI	GGGAC	5 cut(s)	623, 971, 1142, 1474, 2069
BslI	CCNNNNNNNGG	1 cut(s)	564
BsmAI	GTCTC	5 cut(s)	344, 962, 1115, 1356, 1887
BsmBI	CGTCTC	1 cut(s)	1356
BsmFI	GGGAC	5 cut(s)	623, 971, 1142, 1474, 2069
BsnI	GGCC	3 cut(s)	175, 1668, 1956
Bso31I	GGTCTC	1 cut(s)	1887
BsoBI	CYCGRG	1 cut(s)	604
Bsp1286I	GDGCHC	3 cut(s)	808, 1188, 1249
Bsp1407I	TGTACA	2 cut(s)	769, 910
Bsp143I	GATC	8 cut(s)	3, 486, 762, 1039, 1050, 1369, 1849, 2075
Bsp19I	CCATGG	1 cut(s)	1606
BspACI	CCGC	5 cut(s)	677, 1693, 2014, 2108, 2227
BspANI	GGCC	3 cut(s)	175, 1668, 1956
BspCNI	CTCAG	1 cut(s)	1108
BspDI	ATCGAT	1 cut(s)	1440
BspLI	GGNNCC	6 cut(s)	30, 174, 675, 1158, 1414, 1632
BspMAI	CTGCAG	2 cut(s)	942, 1531
BspMI	ACCTGC	1 cut(s)	1821
BspPI	GGATC	4 cut(s)	494, 1045, 1364, 1857
BspT107I	GGYRCC	2 cut(s)	28, 1412
BspTNI	GGTCTC	1 cut(s)	1887
BsrDI	GCAATG	5 cut(s)	183, 262, 825, 1301, 2281
BsrGI	TGTACA	2 cut(s)	769, 910
BsrI	ACTGG	4 cut(s)	136, 176, 897, 1027
BssECI	CCNNGG	5 cut(s)	680, 1483, 1606, 1917, 2097
BssMI	GATC	8 cut(s)	3, 486, 762, 1039, 1050, 1369, 1849, 2075
BssNAI	GTATAC	1 cut(s)	687
BssNI	GRCGYC	1 cut(s)	29
BssSI	CACGAG	1 cut(s)	1377
BssT1I	CCWWGG	3 cut(s)	1483, 1606, 1917
Bst1107I	GTATAC	1 cut(s)	687
Bst2BI	CACGAG	1 cut(s)	1377
Bst2UI	CCWGG	4 cut(s)	559, 681, 1086, 1398
Bst4CI	ACNGT	7 cut(s)	17, 774, 1145, 1470, 1826, 1963, 2193
Bst6I	CTCTTC	4 cut(s)	56, 468, 1013, 1398
BstACI	GRCGYC	1 cut(s)	29
BstAUI	TGTACA	2 cut(s)	769, 910
BstBAI	YACGTR	1 cut(s)	509
BstC8I	GCNNGC	5 cut(s)	365, 1737, 2022, 2092, 2224
BstDEI	CTNAG	5 cut(s)	156, 697, 1007, 1116, 1127
BstDSI	CCRYGG	1 cut(s)	1606
BstEII	GGTNACC	1 cut(s)	1478
BstF5I	GGATG	3 cut(s)	457, 664, 1054
BstH2I	RGCGCY	1 cut(s)	32
BstHHI	GCGC	1 cut(s)	31
BstKTI	GATC	8 cut(s)	6, 489, 765, 1042, 1053, 1372, 1852, 2078
BstMAI	GTCTC	5 cut(s)	344, 962, 1115, 1356, 1887
BstMBI	GATC	8 cut(s)	3, 486, 762, 1039, 1050, 1369, 1849, 2075
BstMWI	GCNNNNNNNGC	4 cut(s)	37, 812, 1274, 2174
BstNI	CCWGG	4 cut(s)	559, 681, 1086, 1398
BstPAI	GACNNNNGTC	1 cut(s)	1695
BstPI	GGTNACC	1 cut(s)	1478
BstSCI	CCNGG	4 cut(s)	557, 679, 1084, 1396
BstSFI	CTRYAG	4 cut(s)	35, 938, 1527, 2217
BstSLI	GKGCMC	1 cut(s)	1249
BstV1I	GCAGC	6 cut(s)	235, 688, 827, 952, 1125, 1513
BstV2I	GAAGAC	2 cut(s)	491, 1354
BstX2I	RGATCY	1 cut(s)	1050
BstYI	RGATCY	1 cut(s)	1050
BstZ17I	GTATAC	1 cut(s)	687
Bsu15I	ATCGAT	1 cut(s)	1440
BsuI	GTATCC	2 cut(s)	1721, 1741
BsuRI	GGCC	3 cut(s)	175, 1668, 1956
BsuTUI	ATCGAT	1 cut(s)	1440
BtgI	CCRYGG	1 cut(s)	1606
BtgZI	GCGATG	3 cut(s)	1754, 2020, 2079
BtsCI	GGATG	3 cut(s)	457, 664, 1054
BtsIMutI	CAGTG	4 cut(s)	435, 772, 1150, 1533
BveI	ACCTGC	1 cut(s)	1821
Cac8I	GCNNGC	5 cut(s)	365, 1737, 2022, 2092, 2224
CaiI	CAGNNNCTG	1 cut(s)	1535
CfoI	GCGC	1 cut(s)	31
Cfr13I	GGNCC	6 cut(s)	173, 232, 1131, 1156, 1667, 1955
ClaI	ATCGAT	1 cut(s)	1440
Csp6I	GTAC	5 cut(s)	770, 866, 911, 922, 1413
CspCI	CAANNNNNGTGG	2 cut(s)	456, 491
CviAII	CATG	6 cut(s)	537, 643, 1208, 1260, 1270, 1607
CviQI	GTAC	5 cut(s)	770, 866, 911, 922, 1413
DdeI	CTNAG	5 cut(s)	156, 697, 1007, 1116, 1127
DinI	GGCGCC	1 cut(s)	30
DpnI	GATC	8 cut(s)	5, 488, 764, 1041, 1052, 1371, 1851, 2077
DpnII	GATC	8 cut(s)	3, 486, 762, 1039, 1050, 1369, 1849, 2075
DraI	TTTAAA	1 cut(s)	954
DrdI	GACNNNNNNGTC	3 cut(s)	1129, 1507, 2196
DseDI	GACNNNNNNGTC	3 cut(s)	1129, 1507, 2196
Eam1104I	CTCTTC	4 cut(s)	56, 468, 1013, 1398
EarI	CTCTTC	4 cut(s)	56, 468, 1013, 1398
Ecl136II	GAGCTC	1 cut(s)	1186
Eco130I	CCWWGG	3 cut(s)	1483, 1606, 1917
Eco24I	GRGCYC	1 cut(s)	1188
Eco31I	GGTCTC	1 cut(s)	1887
Eco47I	GGWCC	3 cut(s)	232, 1131, 1156
Eco53kI	GAGCTC	1 cut(s)	1186
Eco88I	CYCGRG	1 cut(s)	604
Eco91I	GGTNACC	1 cut(s)	1478
EcoICRI	GAGCTC	1 cut(s)	1186
EcoO109I	RGGNCCY	2 cut(s)	1131, 1156
EcoO65I	GGTNACC	1 cut(s)	1478
EcoRI	GAATTC	1 cut(s)	266
EcoRII	CCWGG	4 cut(s)	557, 679, 1084, 1396
EcoT14I	CCWWGG	3 cut(s)	1483, 1606, 1917
EcoT22I	ATGCAT	1 cut(s)	185
EcoT38I	GRGCYC	1 cut(s)	1188
EgeI	GGCGCC	1 cut(s)	30
EheI	GGCGCC	1 cut(s)	30
ErhI	CCWWGG	3 cut(s)	1483, 1606, 1917
Esp3I	CGTCTC	1 cut(s)	1356
FaeI	CATG	6 cut(s)	540, 646, 1211, 1263, 1273, 1610
FaqI	GGGAC	5 cut(s)	623, 971, 1142, 1474, 2069
FatI	CATG	6 cut(s)	536, 642, 1207, 1259, 1269, 1606
FauNDI	CATATG	1 cut(s)	742
FbaI	TGATCA	1 cut(s)	1039
FblI	GTMKAC	2 cut(s)	686, 829
Fnu4HI	GCNGC	8 cut(s)	224, 677, 702, 816, 941, 1139, 1527, 2227
FokI	GGATG	3 cut(s)	464, 671, 1041
FriOI	GRGCYC	1 cut(s)	1188
Fsp4HI	GCNGC	8 cut(s)	224, 677, 702, 816, 941, 1139, 1527, 2227
FspBI	CTAG	3 cut(s)	194, 248, 1484
GlaI	GCGC	1 cut(s)	30
GluI	GCNGC	8 cut(s)	224, 677, 702, 816, 941, 1139, 1527, 2227
GsuI	CTGGAG	1 cut(s)	119
HaeII	RGCGCY	1 cut(s)	32
HaeIII	GGCC	3 cut(s)	175, 1668, 1956
HhaI	GCGC	1 cut(s)	31
Hin1I	GRCGYC	1 cut(s)	29
Hin1II	CATG	6 cut(s)	540, 646, 1211, 1263, 1273, 1610
Hin6I	GCGC	1 cut(s)	29
HinP1I	GCGC	1 cut(s)	29
HincII	GTYRAC	3 cut(s)	13, 894, 2250
HindII	GTYRAC	3 cut(s)	13, 894, 2250
HindIII	AAGCTT	1 cut(s)	1685
HphI	GGTGA	9 cut(s)	114, 541, 632, 641, 1490, 1595, 1946, 1988, 2122
Hpy188III	TCNNGA	5 cut(s)	484, 959, 1355, 1789, 1990
HpyCH4III	ACNGT	7 cut(s)	17, 774, 1145, 1470, 1826, 1963, 2193
HpyCH4IV	ACGT	2 cut(s)	508, 1939
HpyF10VI	GCNNNNNNNGC	4 cut(s)	37, 812, 1274, 2174
HpyF3I	CTNAG	5 cut(s)	156, 697, 1007, 1116, 1127
HpySE526I	ACGT	2 cut(s)	508, 1939
Hsp92I	GRCGYC	1 cut(s)	29
Hsp92II	CATG	6 cut(s)	540, 646, 1211, 1263, 1273, 1610
HspAI	GCGC	1 cut(s)	29
KasI	GGCGCC	1 cut(s)	28
KpnI	GGTACC	1 cut(s)	1416
Ksp22I	TGATCA	1 cut(s)	1039
Kzo9I	GATC	8 cut(s)	3, 486, 762, 1039, 1050, 1369, 1849, 2075
LmnI	GCTCC	5 cut(s)	673, 811, 1562, 1630, 2099
Lsp1109I	GCAGC	6 cut(s)	235, 688, 827, 952, 1125, 1513
LweI	GCATC	5 cut(s)	431, 1212, 1990, 2043, 2238
MaeI	CTAG	3 cut(s)	194, 248, 1484
MaeII	ACGT	2 cut(s)	508, 1939
MaeIII	GTNAC	8 cut(s)	238, 259, 1201, 1387, 1478, 1531, 1591, 1878
MalI	GATC	8 cut(s)	5, 488, 764, 1041, 1052, 1371, 1851, 2077
MboI	GATC	8 cut(s)	3, 486, 762, 1039, 1050, 1369, 1849, 2075
MfeI	CAATTG	2 cut(s)	227, 2079
MflI	RGATCY	1 cut(s)	1050
MhlI	GDGCHC	3 cut(s)	808, 1188, 1249
Mly113I	GGCGCC	1 cut(s)	29
MlyI	GAGTC	9 cut(s)	161, 454, 596, 1100, 1117, 1384, 1541, 1785, 1791
MmeI	TCCRAC	1 cut(s)	1725
Mph1103I	ATGCAT	1 cut(s)	185
MroXI	GAANNNNTTC	1 cut(s)	545
MseI	TTAA	9 cut(s)	516, 636, 720, 918, 953, 974, 1152, 1424, 1683
MslI	CAYNNNNRTG	1 cut(s)	647
MspA1I	CMGCKG	2 cut(s)	40, 1703
MspR9I	CCNGG	4 cut(s)	559, 681, 1086, 1398
MunI	CAATTG	2 cut(s)	227, 2079
MvaI	CCWGG	4 cut(s)	559, 681, 1086, 1398
MwoI	GCNNNNNNNGC	4 cut(s)	37, 812, 1274, 2174
NarI	GGCGCC	1 cut(s)	29
NcoI	CCATGG	1 cut(s)	1606
NdeI	CATATG	1 cut(s)	742
NdeII	GATC	8 cut(s)	3, 486, 762, 1039, 1050, 1369, 1849, 2075
NlaIII	CATG	6 cut(s)	540, 646, 1211, 1263, 1273, 1610
NlaIV	GGNNCC	6 cut(s)	30, 174, 675, 1158, 1414, 1632
NmuCI	GTSAC	7 cut(s)	238, 1201, 1387, 1478, 1531, 1591, 1878
NsiI	ATGCAT	1 cut(s)	185
PcsI	WCGNNNNNNNCGW	2 cut(s)	1936, 2197
PdmI	GAANNNNTTC	1 cut(s)	545
PfeI	GAWTC	8 cut(s)	119, 398, 728, 851, 1452, 1792, 1950, 2007
PkrI	GCNGC	8 cut(s)	225, 678, 703, 817, 942, 1140, 1528, 2228
PleI	GAGTC	9 cut(s)	160, 454, 596, 1099, 1117, 1384, 1541, 1784, 1790
PluTI	GGCGCC	1 cut(s)	32
PpsI	GAGTC	9 cut(s)	160, 454, 596, 1099, 1117, 1384, 1541, 1784, 1790
Ppu21I	YACGTR	1 cut(s)	509
PpuMI	RGGWCCY	2 cut(s)	1131, 1156
PshAI	GACNNNNGTC	1 cut(s)	1695
PshBI	ATTAAT	1 cut(s)	974
PsiI	TTATAA	2 cut(s)	1217, 1835
Psp124BI	GAGCTC	1 cut(s)	1188
Psp5II	RGGWCCY	2 cut(s)	1131, 1156
Psp6I	CCWGG	4 cut(s)	557, 679, 1084, 1396
PspEI	GGTNACC	1 cut(s)	1478
PspGI	CCWGG	4 cut(s)	557, 679, 1084, 1396
PspN4I	GGNNCC	6 cut(s)	30, 174, 675, 1158, 1414, 1632
PspPI	GGNCC	6 cut(s)	173, 232, 1131, 1156, 1667, 1955
PspPPI	RGGWCCY	2 cut(s)	1131, 1156
PstI	CTGCAG	2 cut(s)	942, 1531
PstNI	CAGNNNCTG	1 cut(s)	1535
PsuI	RGATCY	1 cut(s)	1050
PvuII	CAGCTG	2 cut(s)	40, 1703
RsaI	GTAC	5 cut(s)	771, 867, 912, 923, 1414
RsaNI	GTAC	5 cut(s)	770, 866, 911, 922, 1413
RseI	CAYNNNNRTG	1 cut(s)	647
SacI	GAGCTC	1 cut(s)	1188
SaqAI	TTAA	9 cut(s)	516, 636, 720, 918, 953, 974, 1152, 1424, 1683
SatI	GCNGC	8 cut(s)	224, 677, 702, 816, 941, 1139, 1527, 2227
Sau3AI	GATC	8 cut(s)	3, 486, 762, 1039, 1050, 1369, 1849, 2075
Sau96I	GGNCC	6 cut(s)	173, 232, 1131, 1156, 1667, 1955
ScaI	AGTACT	1 cut(s)	923
SchI	GAGTC	9 cut(s)	161, 454, 596, 1100, 1117, 1384, 1541, 1785, 1791
ScrFI	CCNGG	4 cut(s)	559, 681, 1086, 1398
SduI	GDGCHC	3 cut(s)	808, 1188, 1249
SfaNI	GCATC	5 cut(s)	431, 1212, 1990, 2043, 2238
SfcI	CTRYAG	4 cut(s)	35, 938, 1527, 2217
SfoI	GGCGCC	1 cut(s)	30
SinI	GGWCC	3 cut(s)	232, 1131, 1156
SmiI	ATTTAAAT	1 cut(s)	954
SmiMI	CAYNNNNRTG	1 cut(s)	647
SmlI	CTYRAG	1 cut(s)	209
SmoI	CTYRAG	1 cut(s)	209
SsiI	CCGC	5 cut(s)	677, 1693, 2014, 2108, 2227
SspDI	GGCGCC	1 cut(s)	28
SspI	AATATT	3 cut(s)	718, 1614, 1769
SspMI	CTAG	3 cut(s)	194, 248, 1484
SstI	GAGCTC	1 cut(s)	1188
StyD4I	CCNGG	4 cut(s)	557, 679, 1084, 1396
StyI	CCWWGG	3 cut(s)	1483, 1606, 1917
SwaI	ATTTAAAT	1 cut(s)	954
TaaI	ACNGT	7 cut(s)	17, 774, 1145, 1470, 1826, 1963, 2193
TaiI	ACGT	2 cut(s)	511, 1942
TaqI	TCGA	8 cut(s)	142, 377, 846, 1440, 1722, 1788, 1930, 2074
TaqII	GACCGA	1 cut(s)	721
TatI	WGTACW	4 cut(s)	769, 865, 910, 921
TauI	GCSGC	2 cut(s)	679, 2229
TfiI	GAWTC	8 cut(s)	119, 398, 728, 851, 1452, 1792, 1950, 2007
Tru1I	TTAA	9 cut(s)	516, 636, 720, 918, 953, 974, 1152, 1424, 1683
Tru9I	TTAA	9 cut(s)	516, 636, 720, 918, 953, 974, 1152, 1424, 1683
TscAI	CASTG	4 cut(s)	442, 772, 1150, 1540
TseFI	GTSAC	7 cut(s)	238, 1201, 1387, 1478, 1531, 1591, 1878
TseI	GCWGC	6 cut(s)	223, 701, 815, 940, 1138, 1526
Tsp45I	GTSAC	7 cut(s)	238, 1201, 1387, 1478, 1531, 1591, 1878
TspDTI	ATGAA	7 cut(s)	107, 269, 390, 668, 992, 1248, 2113
TspGWI	ACGGA	1 cut(s)	580
TspRI	CASTG	4 cut(s)	442, 772, 1150, 1540
VneI	GTGCAC	1 cut(s)	1245
VpaK11BI	GGWCC	3 cut(s)	232, 1131, 1156
VspI	ATTAAT	1 cut(s)	974
XapI	RAATTY	2 cut(s)	266, 781
XmaJI	CCTAGG	1 cut(s)	1483
XmiI	GTMKAC	2 cut(s)	686, 829
XmnI	GAANNNNTTC	1 cut(s)	545
XspI	CTAG	3 cut(s)	194, 248, 1484
ZrmI	AGTACT	1 cut(s)	923
Zsp2I	ATGCAT	1 cut(s)	185

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.