regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50380 AT3G50380 AT3G50380 AT3G50380 |
| fragaria_vesca | FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_1g14580 FvH4_5g25081 FvH4_5g34340 |
| malus_domestica | MD02G1159300.v1.1 |
| prunus_persica | Prupe.7G144700_v2.0.a1 Prupe.7G144700_v2.0.a1 Prupe.7G144700_v2.0.a1 |
| pyrus_communis | pycom02g12560 |
| rosa_chinensis | RchiOBHm_Chr2g0103341 |
| rosa_laevigata | RLG00000017225 |
| rosa_multiflora | Rmu_sc0001555.1_g000014 Rmu_sc0009003.1_g000002 Rmu_sc0010053.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00139720 |
| rosa_rugosa | Rorug02G0114000 |
| rosa_samantha | Rh2AG162300 Rh2BG169400 Rh2CG169400 Rh2DG168200 |
| rosa_wichuraiana | Rw0G019420 Rw2G012750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 95 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 456 |
| Acc36I | ACCTGC | 1 cut(s) | 81 |
| AciI | CCGC | 4 cut(s) | 274, 368, 487, 498 |
| AclWI | GGATC | 2 cut(s) | 117, 413 |
| AluBI | AGCT | 3 cut(s) | 284, 354, 482 |
| AluI | AGCT | 3 cut(s) | 284, 354, 482 |
| Alw26I | GTCTC | 1 cut(s) | 147 |
| AlwI | GGATC | 2 cut(s) | 117, 413 |
| AoxI | GGCC | 1 cut(s) | 214 |
| AspS9I | GGNCC | 1 cut(s) | 215 |
| AsuHPI | GGTGA | 3 cut(s) | 206, 248, 382 |
| BccI | CCATC | 2 cut(s) | 320, 440 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 339, 373 |
| BcoDI | GTCTC | 1 cut(s) | 147 |
| BfmI | CTRYAG | 1 cut(s) | 477 |
| BfuAI | ACCTGC | 1 cut(s) | 81 |
| BisI | GCNGC | 2 cut(s) | 487, 499 |
| BlsI | GCNGC | 2 cut(s) | 488, 500 |
| BmgT120I | GGNCC | 1 cut(s) | 215 |
| BmsI | GCATC | 3 cut(s) | 250, 303, 498 |
| Bsa29I | ATCGAT | 1 cut(s) | 338 |
| BsaI | GGTCTC | 1 cut(s) | 147 |
| BsaJI | CCNNGG | 2 cut(s) | 177, 357 |
| Bse3DI | GCAATG | 1 cut(s) | 538 |
| BseCI | ATCGAT | 1 cut(s) | 338 |
| BseDI | CCNNGG | 2 cut(s) | 177, 357 |
| BseMI | GCAATG | 1 cut(s) | 538 |
| BseRI | GAGGAG | 1 cut(s) | 346 |
| Bsh1285I | CGRYCG | 1 cut(s) | 338 |
| BshFI | GGCC | 1 cut(s) | 216 |
| BshVI | ATCGAT | 1 cut(s) | 338 |
| BsiEI | CGRYCG | 1 cut(s) | 338 |
| BslFI | GGGAC | 1 cut(s) | 329 |
| BsmAI | GTCTC | 1 cut(s) | 147 |
| BsmFI | GGGAC | 1 cut(s) | 329 |
| BsnI | GGCC | 1 cut(s) | 216 |
| Bso31I | GGTCTC | 1 cut(s) | 147 |
| Bsp143I | GATC | 3 cut(s) | 109, 335, 405 |
| BspACI | CCGC | 4 cut(s) | 274, 368, 487, 498 |
| BspANI | GGCC | 1 cut(s) | 216 |
| BspDI | ATCGAT | 1 cut(s) | 338 |
| BspMI | ACCTGC | 1 cut(s) | 81 |
| BspPI | GGATC | 2 cut(s) | 117, 413 |
| BspTNI | GGTCTC | 1 cut(s) | 147 |
| BsrDI | GCAATG | 1 cut(s) | 538 |
| BssECI | CCNNGG | 2 cut(s) | 177, 357 |
| BssMI | GATC | 3 cut(s) | 109, 335, 405 |
| BssT1I | CCWWGG | 1 cut(s) | 177 |
| Bst4CI | ACNGT | 3 cut(s) | 86, 223, 453 |
| BstC8I | GCNNGC | 3 cut(s) | 282, 352, 484 |
| BstKTI | GATC | 3 cut(s) | 112, 338, 408 |
| BstMAI | GTCTC | 1 cut(s) | 147 |
| BstMBI | GATC | 3 cut(s) | 109, 335, 405 |
| BstMCI | CGRYCG | 1 cut(s) | 338 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 434, 495 |
| BstSFI | CTRYAG | 1 cut(s) | 477 |
| Bsu15I | ATCGAT | 1 cut(s) | 338 |
| BsuRI | GGCC | 1 cut(s) | 216 |
| BsuTUI | ATCGAT | 1 cut(s) | 338 |
| BtgZI | GCGATG | 2 cut(s) | 280, 339 |
| BveI | ACCTGC | 1 cut(s) | 81 |
| Cac8I | GCNNGC | 3 cut(s) | 282, 352, 484 |
| Cfr13I | GGNCC | 1 cut(s) | 215 |
| ClaI | ATCGAT | 1 cut(s) | 338 |
| CviJI | RGCY | 7 cut(s) | 216, 284, 316, 354, 428, 482, 501 |
| CviKI_1 | RGCY | 7 cut(s) | 216, 284, 316, 354, 428, 482, 501 |
| DpnI | GATC | 3 cut(s) | 111, 337, 407 |
| DpnII | GATC | 3 cut(s) | 109, 335, 405 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 456 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 456 |
| Eco130I | CCWWGG | 1 cut(s) | 177 |
| Eco31I | GGTCTC | 1 cut(s) | 147 |
| EcoT14I | CCWWGG | 1 cut(s) | 177 |
| ErhI | CCWWGG | 1 cut(s) | 177 |
| FaiI | YATR | 8 cut(s) | 18, 95, 107, 431, 439, 441, 443, 457 |
| FaqI | GGGAC | 1 cut(s) | 329 |
| Fnu4HI | GCNGC | 2 cut(s) | 487, 499 |
| Fsp4HI | GCNGC | 2 cut(s) | 487, 499 |
| GluI | GCNGC | 2 cut(s) | 487, 499 |
| HaeIII | GGCC | 1 cut(s) | 216 |
| HincII | GTYRAC | 1 cut(s) | 510 |
| HindII | GTYRAC | 1 cut(s) | 510 |
| HinfI | GANTC | 5 cut(s) | 36, 42, 52, 210, 267 |
| HphI | GGTGA | 3 cut(s) | 206, 248, 382 |
| Hpy166II | GTNNAC | 3 cut(s) | 61, 197, 510 |
| Hpy188I | TCNGA | 4 cut(s) | 41, 147, 266, 361 |
| Hpy188III | TCNNGA | 2 cut(s) | 49, 250 |
| Hpy8I | GTNNAC | 3 cut(s) | 61, 197, 510 |
| HpyAV | CCTTC | 2 cut(s) | 112, 367 |
| HpyCH4III | ACNGT | 3 cut(s) | 86, 223, 453 |
| HpyCH4IV | ACGT | 1 cut(s) | 199 |
| HpyCH4V | TGCA | 2 cut(s) | 294, 350 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 434, 495 |
| HpySE526I | ACGT | 1 cut(s) | 199 |
| Kzo9I | GATC | 3 cut(s) | 109, 335, 405 |
| LmnI | GCTCC | 1 cut(s) | 359 |
| LpnPI | CCDG | 6 cut(s) | 41, 86, 284, 330, 360, 489 |
| LweI | GCATC | 3 cut(s) | 250, 303, 498 |
| MaeII | ACGT | 1 cut(s) | 199 |
| MaeIII | GTNAC | 1 cut(s) | 138 |
| MalI | GATC | 3 cut(s) | 111, 337, 407 |
| MboI | GATC | 3 cut(s) | 109, 335, 405 |
| MboII | GAAGA | 2 cut(s) | 179, 374 |
| MlyI | GAGTC | 2 cut(s) | 45, 51 |
| MnlI | CCTC | 4 cut(s) | 74, 169, 185, 367 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 434, 495 |
| NdeII | GATC | 3 cut(s) | 109, 335, 405 |
| NmuCI | GTSAC | 1 cut(s) | 138 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 196, 457 |
| PfeI | GAWTC | 3 cut(s) | 52, 210, 267 |
| PkrI | GCNGC | 2 cut(s) | 488, 500 |
| Ple19I | CGATCG | 1 cut(s) | 338 |
| PleI | GAGTC | 2 cut(s) | 44, 50 |
| PpsI | GAGTC | 2 cut(s) | 44, 50 |
| PsiI | TTATAA | 1 cut(s) | 95 |
| PspPI | GGNCC | 1 cut(s) | 215 |
| PvuI | CGATCG | 1 cut(s) | 338 |
| SatI | GCNGC | 2 cut(s) | 487, 499 |
| Sau3AI | GATC | 3 cut(s) | 109, 335, 405 |
| Sau96I | GGNCC | 1 cut(s) | 215 |
| SchI | GAGTC | 2 cut(s) | 45, 51 |
| SetI | ASST | 9 cut(s) | 60, 66, 75, 196, 202, 238, 286, 356, 484 |
| SfaNI | GCATC | 3 cut(s) | 250, 303, 498 |
| SfcI | CTRYAG | 1 cut(s) | 477 |
| SsiI | CCGC | 4 cut(s) | 274, 368, 487, 498 |
| SspI | AATATT | 1 cut(s) | 29 |
| StyI | CCWWGG | 1 cut(s) | 177 |
| TaaI | ACNGT | 3 cut(s) | 86, 223, 453 |
| TaiI | ACGT | 1 cut(s) | 202 |
| TaqI | TCGA | 4 cut(s) | 48, 190, 334, 338 |
| TauI | GCSGC | 2 cut(s) | 489, 501 |
| TfiI | GAWTC | 3 cut(s) | 52, 210, 267 |
| TseFI | GTSAC | 1 cut(s) | 138 |
| Tsp45I | GTSAC | 1 cut(s) | 138 |
| TspDTI | ATGAA | 1 cut(s) | 373 |