Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0006211

Physical Location & Seq

Genomic Coordinates Forward (+)

25054969 .. 25075416

Gene Structure 20448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g34390.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 7995 bp

ATGGCTGCTTCTCCCGTCAAGTTCCTCTTCGGTTTCTTGATCCTCTGCATCACATTGTGGCTCGTCTTCATATTTGCTTCAAGGTTTATAGCTTGGATTTTAAGCCGCGTATTAGGAGCATCTGTTCAATTTCGGGTTGCTGGATGGGTATTTGTTAGGGATATCGTGGTGAAGTTTAAAAAGGGCCCTATTGAATCTATTTCTGTTGGTGAAATAAAACCCAGCATACGTCGGTCCTTGGTCAAATTAGGGGTTGGTTTTATTTCTAAAGATCCCAAGTTGCAAGTGTTAATATCTGACTTAGAAGTTGTAATGAGGTCTTCAAATAAGAGTACGCCAAAGGCAAAGGCAAAGGCCAAGCCTAAGTCTGGATCTCGAAAACCCCGCAATTCAGGCCGCGGGAAGTGGATGGTAGGAGCCAATATTGCTCGATATTTATCTGTTTCCATCACAGACTTGATTTTGAAGACACCTAAAGCTTCACTTGAAGTAAAGGAACTGAAAGTGGACATATCTAAAGATGGTACATCCAAGCAAAATCTTATTGTCAAGCTACAGATATTACCTATTGTTGTTCAAAGGAATGAACCACGGGCTAGTTGTGACCTGTCATCCACTTTTTGCACCGGAGAAACCCTTTCTGTAGGCCAGTCATCATCTGCTTTGGTGGACAGGTCATCTACTCTTTTTGTCTGTGAAGAATTTTCACTCACATGTGAATTTGGTCATGATAGGGAAGTTGGTGTAATCTTCAAGAATTTGGATATGTCTTGTGGAGAGGTCACTGTGAACCTGAACGAGGAGCTACTATCGAAGAGCAAAAGCTCATCAAAGACTTCATCTGACCCTGATAAAGCTATAGAGTCCACAATCGATTCTATTGCTTCTAAGAAAGCACAGAAAAAGCAACAAATGATTGCTACAATCTCCAAATGCACCGCTTTATTTCCTGAAAAGGTTTCTTTCAATTTGCCAAAATTGGACATGAGATTTGAGCATCGGGAACATGATTTTGCTTTTGAAAATAACATCATGGGCATCCAATTGAAAAGCAGCAAATCACAATCAAGTGAAGATGTCGGAGAAAGCACACGCCTTGATGTTCAATTAGAATTCAGTGAGATTCATCTGCTTAGAGAAGCTGGCACTTCTGTTTTGGAGATACTAAAACTGGATGTAATCTCATTTTTGTACATTCCAATACAGCCAAGCTCTCCTATTAGAGCTGAAATTGATGTAAAGCTGGGTGGTACTCAATGCAACGTTATAATGAACAGATTAAAACCATTGTTGCGCCTCCATTTCTCGAAAAAGAAAAGAATGGTACTTCGGGAGGAAACGCCTACTCCTGACAAGACACCTCCAACAACCGATACCAATATCATCATGTGGACTTGTACCTTTTCTGCCCCTGAGATGACAATTGTGCTTCATAGCCTCGGTGGTTTGCCACTGTATCATGTCTGCTCACAATCATCACATGTATATGCAAATAACATATCAAATACCGGAACCACTGTACATATGGAGCTTGGTGAACTTAATTTGCATATGGCAGATGAATACCAACAATGCTTGAAAGAAAACCTTTTTGGTGTTGAATCAAATTCTGGTTCCATAGTCAATGTTGCAAAGGTTAGTCTAGACTGGGGCAAAAAGGACATGGAATCATCAGAAGAAGGTGCTTCTAAAAGCAAATTAGTTTTATCTGTTGATGTGACTGGTATGGCTGTTTATTTTACTTTCAAGCGTGTTGAGTCGTTTATATCAACTGCCATGTCATTTCAAGCTCTTTTCAAGAGTTTGTCGTCTTCTGAAAAAAAAACGTCACAAAGCCGAGGAGGGCGATCATCAAAATCATCAGGGAAAGGGACTCGGCTATTGAAACTAAATCTTGAACGGTGTTCTTTGAATTTCTGTGGTGAGGTGGGCTTAGAAAAAATGGTTGTCGCAGATCCCAAGCGTGTGAATTATGGATCACAAGGTGGTCGAATAGTTATAAGTGAGTCAGCTGATGGCACTCAACGGGTTGCAGAAGTAATGTCCACAGTATCTGATGATTGTAAGAAGCTAAAGTATTCCATTTCTCTGGACATCTTCCATTTCAGCTTATGTGTGAACAAGGAAAAACAGTCCACCCAGGTTGAACTTGAAAGAGCCAGATCTATCTATCAGGACTACTTGGAGGAACATAAGCCTGCACCAAAATTGGTACTGTTTGATATGCAGAATGCTAAATTTGTACGACGTTCTGGTGGTCTTAAAGAGATTGCTGTCTGCTCTCTTTTCAGTGCTACTGATATTACAATTAGGTGGGAGCCTGATGTACATTTATCACTAATTGAACTTGGACTTCGATTGAAGTTACTGGTACACAATCAGAAGCTTCAGGTACATGGTAAAGAACATATGGAAAATGTATCTAGCATGAGCAACTCTGAACAGAAGAAAGAATCCATTACAGAACCAGTAAAATTAGACAAGCAAAAGAAAAGGGAATCTATCTTTGCTGTTGATGTGGAAATGCTGAATGTTTATGCTGAGGTTGGAGATGGAGTTGATGCAGTAGTCCAGGTACAGTCAATATTTTCCGAGAATGCTCGCATAGGAGTACTTCTGGAAGGATTCCTGCTTTGTTTCAATGGGTGCAGAATACTCAAAAGTAGCCGGATGCAAATTTCGCGTATTCCTAGTGCCTCTTGTGCCCCTGATGCAAAAATACCTCCAGCTACTACATGGGATTGGGTAATACAAGGCCTCGATGTCCATATTTGTTTACCATACAGGTTAGAATTGCGTGCCATTGATGATTCTGTTGAAGAGATGCTGCGTGCTCTAAAGCTTGTAGCTTCTGCTAAAACTAGTCTTATCTTTCCGGTTAAGAAAGATCCTTCAAAAGCTAAGAAGCCCAGTTCAGTAAGATTTGGGTGTCTAAAGTTTTTCATACGGAGGTTAACTTTTGATATCGAAGAAGAACCACTGCAAGGTTGGCTTGATGAACACTATCACTTAATGAAGAATGAGGCATCTGAGTTAGCTGTTAGGTTGAAGTTGCTTGATGAATTTATTTCTAAAGTCAGCCAGACTCCCAAATCCACTGAAACAAACGATGCTATTCGAGAAAGAAAGACTTCCTTTAATGGAGTTGAGATTGATGTACAAGATCCTTCAGCAGTTAGTAAAATGCAAGAAGAAATTCATAAACAATCATTCAGATCTTATTACAATGCATGTCAGAATCTAGCACCATCAAAGGGTTCAGGTGCCTGTAGGGAAGGGTTTCAGGCTGGTTTTAAGCCCAGTACATCAAGAACTTCTCTTCTTGCCATATCAGCAACAGATCTCGATCTAAGCTTGACATTGATTGATGGTGGTGATGATGGGATCATAGATGTTATAAAGATGCTGGATCCTGTCTGTCGTGAAAATAATATACCATTTTCTAAACTTTATGGGGGTAATATTCTTCTGCACACAGGCTCTCTCGTGGTTCAGCTACGTGACTATATGTTTCCTCTCTTGTCCGGAACTTCTGGTAAATGTGAAGGTCGCCTTGTGCTGGGTCAGCAGGCAACAAGTTTTCAGCCTCAAGTACACAAATATGTCTACATTGGGAAATGGAGAAAGGTGCACTTGCTTCGTTCTGCTCCTGGTACAACTCCACCTATGAAAACATTCACAGATTTATCCCTACGATTTCAGAAAGCTGAAGTGTCCTTTGGAGTGGGATATGAACCGTCTTTCGCTGATGTGAGTTATGCGTTTACTGTGGCTCTTCGCAGGGCTAATCTCTGCATTAGGGACCCTAATCCACCACCCGCGCCACCAAAGAAGGAAAAGAGCTTGCCATGGTGGGATGATATGAGAAACTACATTCATGGAAACATCAAGATTCTCTTTAGTGAAACCATATGGAATGTTCTTGCGACTACTGATCCTTATGAAAAGCTTGACAAACTTCAAGTAACAGCGAGTCCTATGGAGATCCAGCAGTCAGATGGTCGTATCTATGTTTCTGCGAATGATTTTAAGGTTTTCTCAAGCAGTTTGGACAGTCTGGCAAATAATCGTGGTTTAAAACTTCCTAAAGGTATATGTGGTCCTGTTATAGAAGCTCCAGCATTTACTGTTGAAGTTACAATGGATTGGGAATGTGAGTCTGGAAAGCCGATGGATCATTATTTATTTGGACTTCCTATTGAAGGGAAACCTCGTGAAAAGGTGTTTGATCCATTCAGATCCACCTCTCTGTCCCTTCGCTGGAATATCTTACTTAGACCCTCTCCCTTACGTGAGAAACAAGCGCCACATTCTAATGCGGTAGATGGTGTAGATGTAGATGGAACTGTTTATGGTCCTCCTCATAAGGAAGATAATGTTTCCATTCTTCCACCAACAGTGAATATTGGTGCTCATGATCTAGCATGGATTCTGAAGTTTTATAACCTGAATTACCTTCCTCCTCACAAATTGCGGGCTTTCGCTCGTTTTCCTCGTTTTGGAGTTCCTAGAATCCCTAGATCAGGTAACTTGTCCTTGGACAGAGTGATGACAGAATTTATGCTCCGCGTTGATGCTTCGCCTACTTGTATAAAGCATGTACCTTTAGATGATGACGATCCAGCTAAAGGACTGACATTCAGTATGACAAAGTTAAAATTGGAAATGTGTTCGAGCAGGGGTAAGCAAAAGTATACTTTTGATTGCAAGCGTGCACCTCTTGATCTCGTTTACCAGGGCCTTGACCTTCATACGCCCAAGGCTTTTTTAAACAAAGAAGAAAGCACTAGTGTTGCAAAAGTAGTTCAAATGACGATAAAAAACTCGCAACCAGCATCAACAGATAGAGTACCAACTGAAAAGAGTAGCAACATGAGTAGTGGCACAGAGAAGCATCGTGATGATGGATTTCTATTGTCGTCAGAGTATTTCACGATTAGAAGGCAGGCCCCGAAGGCTGATCCTGTTAGTTTATTAGCCTGGCAAGAGGCTGGGAGAAAAAATCTTGAGATGACTTATGTGAGGTCCGAGTTTGAAAATGGAAGTGAGAGCGACGAGCATACCCGATCTGATCCAAGTGACGATGATGGATACAATGTGGTAATAGCTGACAATTGCCAACGTATATTTGTTTATGGACTCAAACTTTTGTGGAATATTGAGAATAGGGATGCTGTTTGGTCCTTTGTTGGTGGTCTATCCAAAGCATTTCAAGCCCCCAAACCATCTCCCTCTAGGCAGTTGGCACAAAAGAAATTACTTGAACAACAGTCACAGAGTGGAGGTGAAATGCCGCAAGATGGTAGCTCTAAGCCCACCACTACCAGCCCTACCAGCCATAGTGCTGCTCCTGCTGAGGTATCTGGTTCACTATCATGTCCATCACCTTCCGTCAAATTGGAGACCTCGTCATCTGCAGTTGACAACTCTGCATCTGGTGTAGTTGAAAAGCATAGAGACACCAAAGATGCAGAGGAGGACGGGACTCGTCATTTCATGGTGAATGTTATTGAGCCCCAATTCAATCTTCATTCTGAAGATGCTAATGGAAGGTTTTTGCTTGCTGCTGTTAGTGGCCGTGTTTTGGCCCGGTCATTTCATTCAGTTCTTCATGTTGGCTATGAGATGATTGAGAAGGCTCTTGGTACTGATAATGTAAATATACCAGAATGTGAACCGGAAATGACTTGGAAACGCATGGAGTTTTCTGTAATGTTGGAGCATGTTCAAGCTCATGTTGCTCCAACAGATGTTGATCCTGGAGCTGGATTGCAGTGGCTTCCGAAAATTCGTAGAAGCTCTCCAAAAGTAAAACGTACTGGTGCTTTGCTTGAAAGGGTATTCATGCCTTGTGACATGTACTTTCGCTACACAAGGCACAAAGGTGGAACTCCAGAGTTGAAGGTGAAGCCCTTGAAAGAGCTGACTTTCAATTCCCATAATATCACAGCAACAATGACCTCTCGCCAGTTTCAAGTGATGCTAGATGTGTTGACAAATCTTCTCTTTGCTCGACTTCCTAAGCCTAGAAAAAGTAGTCTGTCACTACCTGCTGAAGATGATGAAGATGTGGAGGAGGAGTCAGACGAGGTGGTTCCTGATGGTGTTGAAGAGGTGGAACTTGCAAAAGTGGAACTTGAGAAAAAAGAACGAGACCAGAGATTGATTCTTGGGGACATAAGGAAGTTATCCCTTCAGTGTGATACTACTGGTGACCTATATCCAGAAAAGGAAGGGGACCTGTGGATGATAAGCTGTACAAGATCTACTCTGGTGCAAGGACTAAAGAGAGAGCTGGTTAATTCTAAAAAATCTCGGAAAGCTGCATATGCATCATTGAGAATGGCTCTACATAAGGCTGCTCAGCTACGGCTAATGGAAAAGGAGAAGAATAAAAGTCCATCCTATGCTATGCGTATTTCTTTGCAAATCAACAAAGTGGTTTGGAGCATGATTGTTGATGGTAAATCTTTTGCCGAGGCTGAGATCAATGACATGATTTATGACTTCGACCGTGACTACAAGGATGTTGGTGTTGCACAATTTACAACAAAGAATTTTGTTGTTAGAAACTGCCTCCCAAATGCCAAATCGGATATGCTTTTATCAGCTTGGAATCCTCCACCTGAATGGGGAAAAAAAGTTATGCTTCGTGTGGATGCAAAGCAGGGAGCTCCAAAGGATGGAAGTTCTCCTCTGGAACTTTTTGAGGTAGAGATTTATCCTCTCAAGATCCATTTAACAGAAACAATGTACAGAATGATGTGGGGATATCTATTCCCAGAAGAAGAACAAGATTCACAAAGACGGCAGGAAGTTTGGAAGATCTCAACAACTACTGGTGCTAAACGTGGTAAGAAAGCTTCTTTAGTGTCCGACATGTCTGCATTTAGCAGTCAAACAATGAAGGAGTCTGAGGGTTCATCCAAATCAAGTGCCTTGGCCCCATGTTCCAGTCAAGCCCCTGTTCCTGCAGATTTTGTACAAGAAACAAAGTTGCAAAGCAAAGCACCCACTGCGGGTGGTGGAAACCCTGAGTTAAGAAGAACATCCTCCTTTGACAGATCATGGGAAGAGACTGTTGCAGAATCAGTTGCTACTGAACTTGTCTTACAGAGTATTAGTGGGCCTCTTGGGTCTATTGAACAAGATGAATCCTCTAAAAATAAATTGAAAGATCCAAAAGCTATAAAATCTGGCAGGTCATCCCATGAGGAAAAGAAGGTACAAAAGTCACAAGAAGAAAAAAAATCTGGCAGGCCTCGAAAGATGATGGAGTTCCACAATATCAAGATAAGCCAGGTTGAGCTATGTGTGACCTATGAAGGATCAAGATTTGTCGTCAATGATCTCAAGTTGCTAATGGATACATTTCACCGTATTGAGTTCACTGGTACTTGGCGGAGACTATTTTCACGTGTTAAGAAACACATCATCTGGGGGGTCCTGAAGTCTGTAACAGGAATGCAGGGTAAGAAGTTCAAAGACAAGTCTAACAATCAGAGAGACCCCGGTGGATCAGGGGTTCCCGATAGTGAGCTTAATTTCAGCGACAATGAAGGCCAGCCAGGACAATCTGATCAGCATCCAATAACCTTCCTCAAGCGTCCCACTGATGGAGCAGGTGATGGATTTGTCACATCCATAAGAGGCCTTTTCAATACTCAGCGTCGTAAGGCCAAGGCATTCGTGCTGCGGACCATGAGGGGTGAAGCTGAGAATGATTTCCAAGGAGATTGGAGTGAAAGTGATGCAGAGTTTTCTCCCTTTGCTAGGCAGCTCACTATAACAAAAGCTAAGAGGCTTATCAGGCGGCACACAAAGAAATTCCGTGCAAGAAAAGGTTCGTCCTCACAACAGAGAGAATCTCTTCCAACATCACCGAGGGAGACCTCTCCTGTGGAAAGTGATTCTTCTGGTGAAGACTCACCCTTTGAGGATTTTAACGATGGATTTAATGACGGCAGCATTTTGGTTTCTAAAGAGGCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0005575 GO:0005623 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0009267 GO:0009605 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009888 GO:0009932 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010015 GO:0010053 GO:0010054 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0016036 GO:0016043 GO:0016049 GO:0021700 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030154 GO:0030307 GO:0030427 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0032989 GO:0033554 GO:0035618 GO:0035619 GO:0035838 GO:0040007 GO:0040008 GO:0042594 GO:0042995 GO:0044463 GO:0044464 GO:0044706 GO:0045927 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051286 GO:0051704 GO:0051716 GO:0060560 GO:0065007 GO:0070297 GO:0070298 GO:0071496 GO:0071695 GO:0071840 GO:0080147 GO:0090404 GO:0090406 GO:0090558 GO:0090627 GO:0099402 GO:0120025 GO:0120038 GO:1902531 GO:1902532 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Apt1 Fmp27_GFWDK

Protein Analysis

2665

Amino Acids

297.67

Weight (kDa)

8.74

Isoelectric Point (pI)

49.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hobbit	PF10344	4 - 2581	0.0	Hobbit/FMP27/BTLP2 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58250 AT1G58250 AT5G49680
fragaria_vesca	FvH4_5g34390
malus_domestica	MD08G1201600.v1.1 MD08G1201800.v1.1 MD08G1202400.v1.1 MD08G1208300.v1.1 MD15G1388100.v1.1
prunus_persica	Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1
pyrus_communis	pycom15g34840
rosa_chinensis	RchiOBHm_Chr7g0235041
rosa_laevigata	RLG00000001185
rosa_multiflora	Rmu_co8243721.1_g000001 Rmu_sc0002239.1_g000001 Rmu_sc0013687.1_g000001 Rmu_sc0015410.1_g000007
rosa_roxburghii	Rroxscaffold_3G00226360
rosa_rugosa	Rorug07G0287300
rosa_samantha	Rh7AG442100 Rh7BG414600 Rh7CG463100 Rh7DG431700
rosa_wichuraiana	Rw7G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	1268, 2000, 3398, 4443
AarI	CACCTGC	1 cut(s)	7613
Acc36I	ACCTGC	3 cut(s)	6058, 7191, 7613
AccB1I	GGYRCC	1 cut(s)	3263
AccB7I	CCANNNNNTGG	1 cut(s)	6683
AccI	GTMKAC	2 cut(s)	3606, 4694
AccII	CGCG	5 cut(s)	108, 399, 2683, 3821, 4569
AccIII	TCCGGA	1 cut(s)	3524
AclI	AACGTT	1 cut(s)	1263
AcoI	YGGCCR	1 cut(s)	5575
AcuI	CTGAAG	8 cut(s)	2372, 3153, 3729, 4454, 5556, 6075, 6179, 7469
AcvI	CACGTG	1 cut(s)	7418
AdeI	CACNNNGTG	3 cut(s)	57, 1985, 5279
AflIII	ACRYGT	5 cut(s)	713, 1480, 5856, 6879, 7417
AhlI	ACTAGT	2 cut(s)	2861, 4787
AjnI	CCWGG	8 cut(s)	2139, 2571, 3649, 4734, 4979, 5758, 7299, 7567
AjuI	GAANNNNNNNTTGG	6 cut(s)	1575, 1607, 3702, 3734, 5511, 5543
AleI	CACNNNNGTG	1 cut(s)	5883
AloI	GAACNNNNNNTCC	4 cut(s)	108, 140, 7509, 7541
Alw21I	GWGCWC	5 cut(s)	2836, 3633, 4414, 4717, 6676
Alw26I	GTCTC	7 cut(s)	5396, 5451, 6147, 7070, 7399, 7500, 7883
Alw44I	GTGCAC	2 cut(s)	3629, 4713
AlwNI	CAGNNNCTG	1 cut(s)	2054
Aor13HI	TCCGGA	1 cut(s)	3524
ApaI	GGGCCC	1 cut(s)	188
ApaLI	GTGCAC	2 cut(s)	3629, 4713
ArsI	GACNNNNNNTTYG	4 cut(s)	974, 1006, 7916, 7948
Asp700I	GAANNNNTTC	7 cut(s)	3130, 3195, 3279, 3674, 7724, 7843, 7869
AspLEI	GCGC	3 cut(s)	1296, 3823, 4306
AsuC2I	CCSGG	2 cut(s)	5590, 7512
AvaII	GGWCC	9 cut(s)	234, 3802, 4100, 4355, 5025, 5181, 6238, 7444, 7698
BaeGI	GKGCMC	4 cut(s)	188, 2707, 3633, 4717
BaeI	ACNNNNGTAYC	2 cut(s)	7217, 7250
BamHI	GGATCC	1 cut(s)	3409
BanI	GGYRCC	1 cut(s)	3263
BanII	GRGCYC	3 cut(s)	188, 5517, 6676
BarI	GAAGNNNNNNTAC	2 cut(s)	6847, 6879
BauI	CACGAG	2 cut(s)	3485, 4212
BbrPI	CACGTG	1 cut(s)	7418
BbsI	GAAGAC	5 cut(s)	58, 312, 473, 1803, 7929
Bbv12I	GWGCWC	5 cut(s)	2836, 3633, 4414, 4717, 6676
BbvCI	CCTCAGC	2 cut(s)	2541, 5355
BbvI	GCAGC	9 cut(s)	1065, 2814, 5332, 5551, 6310, 6346, 7680, 7789, 7977
BceAI	ACGGC	4 cut(s)	5562, 6386, 6824, 7978
BcgI	CGANNNNNNTGC	6 cut(s)	863, 897, 3620, 3654, 6866, 6900
BciT130I	CCWGG	8 cut(s)	2141, 2573, 3651, 4736, 4981, 5760, 7301, 7569
BciVI	GTATCC	2 cut(s)	5084, 7360
BclI	TGATCA	1 cut(s)	7579
BcnI	CCSGG	2 cut(s)	5590, 7512
BcoDI	GTCTC	7 cut(s)	5396, 5451, 6147, 7070, 7399, 7500, 7883
BcuI	ACTAGT	2 cut(s)	2861, 4787
BfmI	CTRYAG	6 cut(s)	554, 642, 858, 3268, 5415, 6972
BfoI	RGCGCY	1 cut(s)	4307
BfuAI	ACCTGC	3 cut(s)	6058, 7191, 7613
BfuI	GTATCC	2 cut(s)	5084, 7360
BglI	GCCNNNNNGGC	1 cut(s)	4955
BglII	AGATCT	5 cut(s)	2162, 3215, 3340, 6263, 6825
BlpI	GCTNAGC	1 cut(s)	6363
BmcAI	AGTACT	1 cut(s)	2613
Bme18I	GGWCC	9 cut(s)	234, 3802, 4100, 4355, 5025, 5181, 6238, 7444, 7698
BmrI	ACTGGG	3 cut(s)	1657, 2904, 3294
BmuI	ACTGGG	3 cut(s)	1657, 2904, 3294
BpiI	GAAGAC	5 cut(s)	58, 312, 473, 1803, 7929
BplI	GAGNNNNNCTC	4 cut(s)	6331, 6363, 7852, 7884
BpmI	CTGGAG	4 cut(s)	2709, 4101, 5781, 5877
Bpu10I	CCTNAGC	3 cut(s)	2541, 5355, 6021
Bpu1102I	GCTNAGC	1 cut(s)	6363
BpuEI	CTTGAG	7 cut(s)	3573, 4024, 5027, 6158, 6713, 7337, 7586
BpuMI	CCSGG	2 cut(s)	5590, 7512
Bsa29I	ATCGAT	1 cut(s)	873
BsaAI	YACGTR	3 cut(s)	3500, 4292, 7418
BsaBI	GATNNNNATC	5 cut(s)	436, 3345, 4617, 5754, 7584
BsaI	GGTCTC	4 cut(s)	5396, 6147, 7500, 7883
BsaWI	WCCGGW	5 cut(s)	626, 1508, 2875, 3524, 5677
Bse8I	GATNNNNATC	5 cut(s)	436, 3345, 4617, 5754, 7584
BseAI	TCCGGA	1 cut(s)	3524
BseBI	CCWGG	8 cut(s)	2141, 2573, 3651, 4736, 4981, 5760, 7301, 7569
BseCI	ATCGAT	1 cut(s)	873
BseJI	GATNNNNATC	5 cut(s)	436, 3345, 4617, 5754, 7584
BseRI	GAGGAG	8 cut(s)	815, 1854, 4350, 4452, 5489, 6089, 6092, 6684
BseSI	GKGCMC	4 cut(s)	188, 2707, 3633, 4717
BseXI	GCAGC	9 cut(s)	1065, 2814, 5332, 5551, 6310, 6346, 7680, 7789, 7977
BseYI	CCCAGC	4 cut(s)	221, 1243, 3559, 4991
BsgI	GTGCAG	3 cut(s)	2184, 2668, 3455
Bsh1236I	CGCG	5 cut(s)	108, 399, 2683, 3821, 4569
Bsh1285I	CGRYCG	1 cut(s)	6514
BshNI	GGYRCC	1 cut(s)	3263
BshVI	ATCGAT	1 cut(s)	873
BsiEI	CGRYCG	1 cut(s)	6514
BsiHKAI	GWGCWC	5 cut(s)	2836, 3633, 4414, 4717, 6676
BsiSI	CCGG	8 cut(s)	627, 1509, 2668, 2876, 3525, 5590, 5678, 7512
BslFI	GGGAC	7 cut(s)	1885, 3815, 4237, 5497, 6188, 6251, 7593
BsmAI	GTCTC	7 cut(s)	5396, 5451, 6147, 7070, 7399, 7500, 7883
BsmFI	GGGAC	7 cut(s)	1885, 3815, 4237, 5497, 6188, 6251, 7593
BsmI	GAATGC	4 cut(s)	2236, 2602, 7470, 7685
Bso31I	GGTCTC	4 cut(s)	5396, 6147, 7500, 7883
Bsp120I	GGGCCC	1 cut(s)	184
Bsp1286I	GDGCHC	8 cut(s)	188, 2707, 2836, 3633, 4414, 4717, 5517, 6676
Bsp13I	TCCGGA	1 cut(s)	3524
Bsp1407I	TGTACA	7 cut(s)	1191, 1519, 2326, 3157, 6257, 6753, 6982
Bsp1720I	GCTNAGC	1 cut(s)	6363
Bsp19I	CCATGG	1 cut(s)	3848
BspDI	ATCGAT	1 cut(s)	873
BspEI	TCCGGA	1 cut(s)	3524
BspFNI	CGCG	5 cut(s)	108, 399, 2683, 3821, 4569
BspHI	TCATGA	2 cut(s)	727, 4414
BspMAI	CTGCAG	2 cut(s)	5419, 6976
BspMI	ACCTGC	3 cut(s)	6058, 7191, 7613
BspQI	GCTCTTC	2 cut(s)	809, 3780
BspT107I	GGYRCC	1 cut(s)	3263
BspTNI	GGTCTC	4 cut(s)	5396, 6147, 7500, 7883
BsrGI	TGTACA	7 cut(s)	1191, 1519, 2326, 3157, 6257, 6753, 6982
BssNAI	GTATAC	1 cut(s)	4695
BssSI	CACGAG	2 cut(s)	3485, 4212
BssT1I	CCWWGG	7 cut(s)	237, 3848, 4536, 4758, 6939, 7680, 7729
Bst1107I	GTATAC	1 cut(s)	4695
Bst2BI	CACGAG	2 cut(s)	3485, 4212
Bst2UI	CCWGG	8 cut(s)	2141, 2573, 3651, 4736, 4981, 5760, 7301, 7569
Bst6I	CTCTTC	8 cut(s)	32, 809, 2814, 3324, 3780, 6105, 7068, 7875
BstAPI	GCANNNNNTGC	1 cut(s)	7016
BstAUI	TGTACA	7 cut(s)	1191, 1519, 2326, 3157, 6257, 6753, 6982
BstBAI	YACGTR	3 cut(s)	3500, 4292, 7418
BstDSI	CCRYGG	3 cut(s)	397, 590, 3848
BstEII	GGTNACC	1 cut(s)	6212
BstENI	CCTNNNNNAGG	4 cut(s)	797, 4200, 4521, 7771
BstFNI	CGCG	5 cut(s)	108, 399, 2683, 3821, 4569
BstH2I	RGCGCY	1 cut(s)	4307
BstHHI	GCGC	3 cut(s)	1296, 3823, 4306
BstMAI	GTCTC	7 cut(s)	5396, 5451, 6147, 7070, 7399, 7500, 7883
BstMCI	CGRYCG	1 cut(s)	6514
BstNI	CCWGG	8 cut(s)	2141, 2573, 3651, 4736, 4981, 5760, 7301, 7569
BstNSI	RCATGY	7 cut(s)	717, 1484, 3234, 4601, 5726, 5860, 6883
BstPI	GGTNACC	1 cut(s)	6212
BstSFI	CTRYAG	6 cut(s)	554, 642, 858, 3268, 5415, 6972
BstSLI	GKGCMC	4 cut(s)	188, 2707, 3633, 4717
BstUI	CGCG	5 cut(s)	108, 399, 2683, 3821, 4569
BstV1I	GCAGC	9 cut(s)	1065, 2814, 5332, 5551, 6310, 6346, 7680, 7789, 7977
BstV2I	GAAGAC	5 cut(s)	58, 312, 473, 1803, 7929
BstXI	CCANNNNNNTGG	2 cut(s)	2089, 6630
BstZ17I	GTATAC	1 cut(s)	4695
Bsu15I	ATCGAT	1 cut(s)	873
BsuI	GTATCC	2 cut(s)	5084, 7360
BsuTUI	ATCGAT	1 cut(s)	873
BtgI	CCRYGG	3 cut(s)	397, 590, 3848
BtsI	GCAGTG	3 cut(s)	2978, 5780, 7014
BveI	ACCTGC	3 cut(s)	6058, 7191, 7613
CaiI	CAGNNNCTG	1 cut(s)	2054
CciI	TCATGA	2 cut(s)	727, 4414
CfoI	GCGC	3 cut(s)	1296, 3823, 4306
Cfr42I	CCGCGG	1 cut(s)	400
ClaI	ATCGAT	1 cut(s)	873
CseI	GACGC	2 cut(s)	7595, 7658
CspCI	CAANNNNNGTGG	2 cut(s)	2125, 2160
DraI	TTTAAA	3 cut(s)	178, 4077, 4770
DraIII	CACNNNGTG	3 cut(s)	57, 1985, 5279
EaeI	YGGCCR	1 cut(s)	5575
Eam1104I	CTCTTC	8 cut(s)	32, 809, 2814, 3324, 3780, 6105, 7068, 7875
EarI	CTCTTC	8 cut(s)	32, 809, 2814, 3324, 3780, 6105, 7068, 7875
EciI	GGCGGA	1 cut(s)	7417
Ecl136II	GAGCTC	1 cut(s)	6674
Eco130I	CCWWGG	7 cut(s)	237, 3848, 4536, 4758, 6939, 7680, 7729
Eco147I	AGGCCT	3 cut(s)	2757, 7261, 7653
Eco24I	GRGCYC	3 cut(s)	188, 5517, 6676
Eco31I	GGTCTC	4 cut(s)	5396, 6147, 7500, 7883
Eco32I	GATATC	3 cut(s)	163, 2965, 6773
Eco47I	GGWCC	9 cut(s)	234, 3802, 4100, 4355, 5025, 5181, 6238, 7444, 7698
Eco53kI	GAGCTC	1 cut(s)	6674
Eco57I	CTGAAG	8 cut(s)	2372, 3153, 3729, 4454, 5556, 6075, 6179, 7469
Eco72I	CACGTG	1 cut(s)	7418
Eco91I	GGTNACC	1 cut(s)	6212
EcoICRI	GAGCTC	1 cut(s)	6674
EcoNI	CCTNNNNNAGG	4 cut(s)	797, 4200, 4521, 7771
EcoO109I	RGGNCCY	7 cut(s)	184, 185, 3802, 4738, 4948, 6238, 7444
EcoO65I	GGTNACC	1 cut(s)	6212
EcoRI	GAATTC	1 cut(s)	1112
EcoRII	CCWGG	8 cut(s)	2139, 2571, 3649, 4734, 4979, 5758, 7299, 7567
EcoRV	GATATC	3 cut(s)	163, 2965, 6773
EcoT14I	CCWWGG	7 cut(s)	237, 3848, 4536, 4758, 6939, 7680, 7729
EcoT22I	ATGCAT	2 cut(s)	3232, 6334
EcoT38I	GRGCYC	3 cut(s)	188, 5517, 6676
ErhI	CCWWGG	7 cut(s)	237, 3848, 4536, 4758, 6939, 7680, 7729
FaqI	GGGAC	7 cut(s)	1885, 3815, 4237, 5497, 6188, 6251, 7593
FauI	CCCGC	5 cut(s)	392, 392, 3826, 4467, 7012
FauNDI	CATATG	5 cut(s)	1524, 1551, 2409, 3911, 6328
FbaI	TGATCA	1 cut(s)	7579
FblI	GTMKAC	2 cut(s)	3606, 4694
FriOI	GRGCYC	3 cut(s)	188, 5517, 6676
GlaI	GCGC	3 cut(s)	1295, 3822, 4305
GsaI	CCCAGC	4 cut(s)	225, 1247, 3563, 4995
GsuI	CTGGAG	4 cut(s)	2709, 4101, 5781, 5877
HaeII	RGCGCY	1 cut(s)	4307
HapII	CCGG	8 cut(s)	627, 1509, 2668, 2876, 3525, 5590, 5678, 7512
HgaI	GACGC	2 cut(s)	7595, 7658
HhaI	GCGC	3 cut(s)	1296, 3823, 4306
Hin6I	GCGC	3 cut(s)	1294, 3821, 4304
HinP1I	GCGC	3 cut(s)	1294, 3821, 4304
HincII	GTYRAC	3 cut(s)	2955, 5422, 5994
HindII	GTYRAC	3 cut(s)	2955, 5422, 5994
HindIII	AAGCTT	6 cut(s)	477, 2384, 2840, 3352, 3947, 6861
HpaI	GTTAAC	1 cut(s)	2955
HpaII	CCGG	8 cut(s)	627, 1509, 2668, 2876, 3525, 5590, 5678, 7512
Hpy99I	CGWCG	4 cut(s)	234, 2250, 5057, 7674
HspAI	GCGC	3 cut(s)	1294, 3821, 4304
KflI	GGGWCCC	1 cut(s)	3802
Kpn2I	TCCGGA	1 cut(s)	3524
Ksp22I	TGATCA	1 cut(s)	7579
KspAI	GTTAAC	1 cut(s)	2955
KspI	CCGCGG	1 cut(s)	400
LguI	GCTCTTC	2 cut(s)	809, 3780
Lsp1109I	GCAGC	9 cut(s)	1065, 2814, 5332, 5551, 6310, 6346, 7680, 7789, 7977
MfeI	CAATTG	3 cut(s)	1043, 1422, 5113
MhlI	GDGCHC	8 cut(s)	188, 2707, 2836, 3633, 4414, 4717, 5517, 6676
MmeI	TCCRAC	7 cut(s)	1060, 1388, 2527, 5697, 5768, 6900, 7898
Mph1103I	ATGCAT	2 cut(s)	3232, 6334
MroI	TCCGGA	1 cut(s)	3524
MroXI	GAANNNNTTC	7 cut(s)	3130, 3195, 3279, 3674, 7724, 7843, 7869
MslI	CAYNNNNRTG	8 cut(s)	712, 1485, 3600, 4314, 4899, 5374, 5883, 6628
MspA1I	CMGCKG	2 cut(s)	399, 2012
MspI	CCGG	8 cut(s)	627, 1509, 2668, 2876, 3525, 5590, 5678, 7512
MunI	CAATTG	3 cut(s)	1043, 1422, 5113
Mva1269I	GAATGC	4 cut(s)	2236, 2602, 7470, 7685
MvaI	CCWGG	8 cut(s)	2141, 2573, 3651, 4736, 4981, 5760, 7301, 7569
MvnI	CGCG	5 cut(s)	108, 399, 2683, 3821, 4569
NciI	CCSGG	2 cut(s)	5590, 7512
NcoI	CCATGG	1 cut(s)	3848
NdeI	CATATG	5 cut(s)	1524, 1551, 2409, 3911, 6328
NmeAIII	GCCGAG	3 cut(s)	1855, 1862, 6502
NsiI	ATGCAT	2 cut(s)	3232, 6334
NspI	RCATGY	7 cut(s)	717, 1484, 3234, 4601, 5726, 5860, 6883
OliI	CACNNNNGTG	1 cut(s)	5883
PagI	TCATGA	2 cut(s)	727, 4414
PaqCI	CACCTGC	1 cut(s)	7613
PceI	AGGCCT	3 cut(s)	2757, 7261, 7653
PciI	ACATGT	4 cut(s)	713, 1480, 5856, 6879
PciSI	GCTCTTC	2 cut(s)	809, 3780
PcsI	WCGNNNNNNNCGW	1 cut(s)	4492
PctI	GAATGC	4 cut(s)	2236, 2602, 7470, 7685
PdmI	GAANNNNTTC	7 cut(s)	3130, 3195, 3279, 3674, 7724, 7843, 7869
PflFI	GACNNNGTC	1 cut(s)	5407
PflMI	CCANNNNNTGG	1 cut(s)	6683
PfoI	TCCNGGA	1 cut(s)	5758
PmaCI	CACGTG	1 cut(s)	7418
PmlI	CACGTG	1 cut(s)	7418
Ppu21I	YACGTR	3 cut(s)	3500, 4292, 7418
PpuMI	RGGWCCY	3 cut(s)	3802, 6238, 7444
PscI	ACATGT	4 cut(s)	713, 1480, 5856, 6879
PsiI	TTATAA	4 cut(s)	1268, 2000, 3398, 4443
Psp124BI	GAGCTC	1 cut(s)	6676
Psp1406I	AACGTT	1 cut(s)	1263
Psp5II	RGGWCCY	3 cut(s)	3802, 6238, 7444
Psp6I	CCWGG	8 cut(s)	2139, 2571, 3649, 4734, 4979, 5758, 7299, 7567
PspCI	CACGTG	1 cut(s)	7418
PspEI	GGTNACC	1 cut(s)	6212
PspFI	CCCAGC	4 cut(s)	221, 1243, 3559, 4991
PspGI	CCWGG	8 cut(s)	2139, 2571, 3649, 4734, 4979, 5758, 7299, 7567
PspOMI	GGGCCC	1 cut(s)	184
PspPPI	RGGWCCY	3 cut(s)	3802, 6238, 7444
PsrI	GAACNNNNNNTAC	2 cut(s)	7095, 7127
PstI	CTGCAG	2 cut(s)	5419, 6976
PstNI	CAGNNNCTG	1 cut(s)	2054
PsyI	GACNNNGTC	1 cut(s)	5407
PvuII	CAGCTG	1 cut(s)	2012
RseI	CAYNNNNRTG	8 cut(s)	712, 1485, 3600, 4314, 4899, 5374, 5883, 6628
SacI	GAGCTC	1 cut(s)	6676
SacII	CCGCGG	1 cut(s)	400
SapI	GCTCTTC	2 cut(s)	809, 3780
ScaI	AGTACT	1 cut(s)	2613
SduI	GDGCHC	8 cut(s)	188, 2707, 2836, 3633, 4414, 4717, 5517, 6676
SfcI	CTRYAG	6 cut(s)	554, 642, 858, 3268, 5415, 6972
Sfr303I	CCGCGG	1 cut(s)	400
SgrBI	CCGCGG	1 cut(s)	400
SinI	GGWCC	9 cut(s)	234, 3802, 4100, 4355, 5025, 5181, 6238, 7444, 7698
SmiMI	CAYNNNNRTG	8 cut(s)	712, 1485, 3600, 4314, 4899, 5374, 5883, 6628
SmlI	CTYRAG	7 cut(s)	3588, 4039, 5006, 6137, 6728, 7352, 7601
SmoI	CTYRAG	7 cut(s)	3588, 4039, 5006, 6137, 6728, 7352, 7601
SpeI	ACTAGT	2 cut(s)	2861, 4787
SseBI	AGGCCT	3 cut(s)	2757, 7261, 7653
SspI	AATATT	5 cut(s)	424, 2586, 3463, 4405, 5158
SstI	GAGCTC	1 cut(s)	6676
StuI	AGGCCT	3 cut(s)	2757, 7261, 7653
StyI	CCWWGG	7 cut(s)	237, 3848, 4536, 4758, 6939, 7680, 7729
TaqII	GACCGA	1 cut(s)	222
TauI	GCSGC	4 cut(s)	108, 399, 5296, 7816
TspGWI	ACGGA	3 cut(s)	2962, 5380, 7820
Tth111I	GACNNNGTC	1 cut(s)	5407
Van91I	CCANNNNNTGG	1 cut(s)	6683
VneI	GTGCAC	2 cut(s)	3629, 4713
VpaK11BI	GGWCC	9 cut(s)	234, 3802, 4100, 4355, 5025, 5181, 6238, 7444, 7698
XagI	CCTNNNNNAGG	4 cut(s)	797, 4200, 4521, 7771
XbaI	TCTAGA	1 cut(s)	1642
XceI	RCATGY	7 cut(s)	717, 1484, 3234, 4601, 5726, 5860, 6883
XcmI	CCANNNNNNNNNTGG	4 cut(s)	1522, 2733, 2985, 3995
XmiI	GTMKAC	2 cut(s)	3606, 4694
XmnI	GAANNNNTTC	7 cut(s)	3130, 3195, 3279, 3674, 7724, 7843, 7869
ZrmI	AGTACT	1 cut(s)	2613
Zsp2I	ATGCAT	2 cut(s)	3232, 6334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.