Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0006211

Physical Location & Seq

Genomic Coordinates Forward (+)

46764567 .. 46788729

Gene Structure 24163 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG414600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 8001 bp

ATGGCGGCTTCGCCCGTCAAGTTCCTCTTCGGTTTCTTGATCCTCTGCATCACATTGTGGCTGCTCTTCATATTTGCTTCAAGGTTTATAGCTTGGATTTTAAGCCGCGTATTAGGAGCATCTGTCAAATTTCGGGTCGCTGGATGGGTATTTGTTAGGGATGTCGTGGTGAAGTTTAAAAAGGGCCCTGTTGAATCTATTTCCATTGGGGAAATTAAACCCAGCATACGTCGGTCCTTGGTTAAACTAGGGGTTGGTTTTATTTCTAAAGATCCCAAGTTGCAAGTGGTAATATCTGACTTGGAAGTTGTAATGAGGTCTTCAAATAAGAGTACGCCAAAGCCAAAGCCAAAGGCAAAGGCCAAGTCTGGATCTCGAAAATCCCGCAATTCAGGCCGTGGAAAGTGGATGGTAGGGGCCAATATTGCACGATATTTATCTGTTTCCATCACAGACTTGGTTTTGAAGACGCCAAAAATTTCCATCGAAGTAAAGGAATTGAAAGTGGACATATCTAAAGATGGTACATCCAAGCAAAATCTTATTGTCAAGCTTCAGATATTACCTATTGTTGTTCAAAGGAATGAACCACGGGCCAGTTGTGACCAGTCATCTAGTTTTTGCTCCGGAGAATCCCTTTCTGTAGGCCAGTCATCATCTGCTTTGGTGGACAGGTCATCTACTCTTTTTGTCTGTGAAGAATTTTCGCTCTCATGTGAATTTGGTCATGATAGGGAAGTTGGTGTAATCTTCAAGAATGTGGATATTTCTAGTGGAGAGGTCAATGTGAACCTGAACGAGGAGCTACTTTCAAAAAGCAAAAGCTCATCAAACACTTCATCTGACCCTGATAAAGCTATAGAATCCTCCACCGATTCTATTGCTTCCAAGAAGGCACAAAAAAAGCAACAAATGAGTGATGCGATCTCAAAATGCACCACTTTATTTCCCGAAAAGGTTTCCTTCAATTTGCCAAAACTGGATGTGAGATTTGAGCATCGGGAACATGATTTTGCTCTTGAGAATAACATCATGGGCATCCAATTGAAAAGCATCAAATCACAATCAAGTGAAGATGTGGGAGAAAGCACGCGCCTTGATGTTCAATTAGAATTCAGCGAGATTCATCTGCTTAGAGAAGCTGGCACTTCCGTTTTGGAGATACTGAAACTTGATGTTATCTCATTTTTGTACATTCCAATACAGCCAAGCTCTCCTATTACAGCTGAAATTGATGTAAAGCTGGGTGGTACTCAATGCAACCTTATAATGAACAGATTAAAGCCATTGTTGCGCCTCCACTTCTCGAAAAAGAAAAGAATGGTACTTCGGGAGGAAAAGCCAACTCTTGACAAGACATCTCCAACAACGGATACCAATATTATCATGTGGACGTGTACCTTTTCAGCCCCTGAGATGACAATTGTGCTTCATAGCCTCAGTGGTTTGCCACTCTATCATGTCTGCTCACAATCATCACATGTATTTGCAAATAACATATCAAATACTGGAACTACTGTACATATGGAGCTCGGTGAACTTAATTTGCATATGGCAGATGAATACCAACAATGCTTGAAAGAAAACCTTTTTGGTGTGGAATCAAATTCAGGTTCCATAGTCAATGTTGCAAAGGTTAGTCTAGATTGGGGCAAAAAGGACATGGAATCATCTGAAGAAGGTGCTTCTAAAAGTAAATTAGTTTTATCTGTTGATGTGACTGGTATGGCTGTTTATTTTACTTTCAAGCGTGTTGAGTCGTTTATATCAACTGCCATGTCATTTCAAGCACTTTTTAAGAATTTGTCGTCTTCTGAAAAAAGAACATCACAAAGCCGAGGAGGGCGATCATCGAAATCCTCAGGGAAAGGGACTCGGCTATTGAAATTAAATCTTGAACGGTGTTCTTTGAATTTCTGTGGTGAGGTGGGTTTAGAAAAAATGGTTGTTCCAGATCCTAAGCGTGTAAATTATGGGTCACAAGGTGGTCGAATTGTTATAAGTGAGTCGGCTGATGGCACTCCACGGGTTGCAGAAGTAATGTCCACAGTATCTGATGATTGTAAGAACTTAAAGTACTCCATTTCTCTTGACATCTTCCATTTCAGCTTATGTGTGAACAAGGAAAAACAATCCACCCAGGTTGAACTTGAAAGAGCCAGATCTATCTATCAGGACTACTTGGAGGAACATAAGCCCGAACCAAAATTGGTACTGTTTGATATGCAGAATGCTAAATTTGTACGACGTTCTGGTGGTCTTAAAGAGATTGCTGTCTGCTCTCTTTTCAGTGCTACTGATATTACAATTAGATGGGAGCCTGATGTACATTTATCACTAATTGAACTTGGACTTCGATTGAAGTTACTGGTGCACAATCAGAAGCTTCAGGTACATGGTAAAGAACATATGGAAAATGTATCTAGCATGAGCAACTCTGAACAGAAGAAAGAAGCCATTACAGAACCAGTAAATTTAGACAAGCAAAAGAAAAGGGAATCTATCTTTGCTGTTGACGTGGAAATGCTGAATGTTTATGCTGAGGTTGGAGATGGAGTTGATGCAGTAGTCCAGGTACAGTCAATATTTTCTGAGAATGCTCGCATAGGAGTACTTCTGGAAGGATTTCTGCTTTGTTTCAATGGGTGCAGAATACTCAAAAGTAGCCGGATGCAAATTTCACGTATTCCTAGTGCATCTTGTGCCCCTGATGCGAAAATACCTCCATCTACCACATGGGATTGGGTAATTCAAGGCCTTGATGTTCATATTTGCTTACCATACAGGTTAGAATTGCGTGCCATTGATGATTCTGTTGAAGAGATGCTGCGTGCTCTAAAGCTTGTAGCTGCTGCTAAAACTAGTCTTATCTTTCCGGTGAAGAAAGATCTTTCAAAAGCTAAGAAGCCCAGTTCAGTAAAATTTGGGTGTTTAAAGTTTTTAATACGGAGGTTAACTTTTGATATTGAAGAAGAACCACTGCAAGGCTGGCTTGATGAACACTATCACTTAATGAAGAATGAGGCATCTGAGTTAGCTGTTAGGTTGAAGTTGCTTGATGAATTTATTTCCAAAGTCAGCCAGTCTCCCAAACCCACTGAAACAAATGATTCTACTCGAGAAAGAAAGACTTTCTTTAATGGAGTTGAGATTGACGTACAAGATCCTTCAGCAGTTAGTAAGATGCAAGAAGAAATTTATAAACAATCATTCAGATCTTATTACAAGGCATGTCAGAATCTAGCACGATCAGAGGGTTCAGGTGCCTGTAGGGAAGGGCTTCAGGCTGGTTTTAAGCCTAGTACATCCAGAACTTCTCTTCTTTCTATATCAGCAACAGATTTAGATGTAAGCTTGACATTGATTGATGGTGGTGATGATGGGATGATAGACGTTATAAAGATGCTGGATCCTGTCTGTCGTGAAAATAATATACCATTTTCTAAACTTTATGGGGGTAATATTCTTCTGCACACAGGCTCACTTGTGGTTCAGCTACGTGATTTTACATTTCCTCTCTTGTCCGGAACTTCTGGTAAATGTGAAGGTCGCCTTGTGCTAGGACAGCAGGCAACAAGTTTTCAGCCTCAAGTACACAAAGATGTCTACATTGGGAAATGGAGAAAGGTGCACTTGCTTCGTTCTGCTACTGGTACAACTCCACCTATGAAAACATTCACAGATTTGTCCCTACGTTTTCAGAAAGCCGAGGTGTCCTTTGGAGTGGGATATGAACCACCTTTCGCTGATGTGAGTTATGCGTTTACTGTGGCTCTTCGCAGGGCTAATCTATGCATTAGGGACCCTAATCCACAACCCTTGCCACCAAAGAAGGAAAAGAGCTTGCCATGGTGGGATGATATGAGAAACTACATTCATGGAAACATTAAGATTCTCTTTTCTGAAACCATATGGAATATTCTTGCGACTACTGATCCGTATGAAAAGCTTGACAAACTTCAAGTGACAGCTAGTCCTATGGAGATCCAGCAGTCAGATGGTCGTATTCATGTTTCTGCGAATGATTTTAAGGTTTTCTCAAGCAGTTTGGACACTCTGGCAAATAATCGTGGTTTAAAACTTCCTAAAGGTATATCTGGTCCTGTAATAGAAGCTCCAGCATTAACTGTTGAAGTTGCAATGGATTGGGAATGTGAGTCTGGAAATCCTATGGATCATTATTTATTTGGACTTCCTATTGAAGGGAAACCTCGTGAAAAGGTGTTTGATCCATTCAGATCCACCTCTCTGTCCCTTCGCTGGAATATCTTGCTTAGACCCTCCCCCTTACGCGAGAAACAAGCTCCACATTCTAATGCGGTAGATGGTGTAGATGTAGATGGAACTGTTTACGGTCCTCCTCATAAGGATGAGAATGTTTCCACTCTTCCACCAACAGTGAATGTTGGCGCTCATGATCTAGCATGGATTCTGAAGTTTTATAACATGAATTATCTTCCTCCTCACAAATTGCGGGCCTTTGCTCGTTTTCCTCGTTTTGGAGTTCCAAGAATCCCTAGATCCGGTAACTTGTCCTTGGACAGAGTGATGACAGAATTTATGCTCCGCGTTGATGCTTCGCCTACTTGTATAAAGCATGTACCTTTAGATGATGACGATCCAGCTAAAGGACTGACATTCAGTATGACAAAGTTGAAATTGGAAATGTGTTCGAGCCGGGGTAAGCAAAAGTATACTTTTGATTGCAAGCGTGCACCTCTTGATCTTGTTTACCAGGGCCTTGACCTTCATATGCCCAAGGCATTTTTAAACAGAGAAGAAAGCACTAGTGTTGCAAAAGTAGTTCAAATGACGATAAAAAACTCACAACCTGCATCAGTAGATAGAGTTCCAACTGAAAAGAGTAGCAACATGAGTAGTGGCACAGAGAAGCATCGTGATGATGGATTTCTATTGTCATCAGAGTATTTCACGATCAGAAGGCAGGCCCCGAAGGCTGATCCTGTTAGTTTATTAGCCTGGCAAGAGGCTGGAAGAAAAAATCTTGAGATGACTTATGTGAGGTCTGAATTTGAAAATGGAAGTGAGAGTGACGAGCATACCCGATCTGATCCAAGTGACGATGATGGATACAATGTGGTAATAGCTGACAATTGCCAACGTATATTTGTCTATGGACTCAAACTTCTGTGGAATATTGAGAATAGAGATGCTGTTTGGTCCTTTGTTGGTGGTCTATCCAAAGCATTTCAAGCCCCCAAACCTTCTCCCTCTAGGCAGTATGCACAAAAGAAATTACTTGAGGAGCAGCAGTCACATAGTGGAAGTGAAATGCAGCAAGATGGTAGCTCTAAGCCCACCACTACCAGCCATGGTGCTGCTCCTGCAGAGGTATCTGGTTCACTATCATCTCCGTCACCTTCCGTCAAATCGGAGATCTCGTCATCTGCAGTTGACAACTCTTCATCTGGTGTAGTAGAAAAGCATAGAGAGACCAAAGATGCAGAGGAGGACGGGACTCGTCATTTCATGGTGAATGTTATTGAGCCCCAATTCAATCTTCATTCAGAAGATGCCAATGGAAGGTTTTTGCTTGCTGCTGTTAGTGGCCGTGTTTTGGCCCGGTCATTTCACTCAGTTCTTCATGTTGTCTCTGAGATGATTGGCTCTGAGATGATTGAGAAGCTTCGTACTGATAATTTAAATATACCAGAATGTGAACCGGAAATGACATGGAAACGCATGGAGTTTTCTGTAATGTTAGAGCATGTTCAAGCTCATGTTGCTCCAACAGATGTTGATCCTGGAGCTGGATTGCAGTGGCTTCCAAAAATTCGCAGAAGCTCTCCAAAAGTAAAACGTACTGGTGCTTTACTTGAAAGGGTATTTATGCCCTGTGACATGTACTTTCGCTACACGAGGCACAAAGGTGGAACTCCAGAGTTGAAGGTGAAGCCCTTAAAAGAGCTGACTTTCAATTCCCATAATATCACGGCAACAATGACCTCTCGCCAATTTCAAGTTATGCTAGATGTGTTGACAAATCTTCTTTTTGCACGACTTCCCAAGCCTAGAAAAAGTAGTCTGTCACTGCCTGCTGAAGATGATGAAGATGTGGAGGAGGAGTCAGACGAAGTGGTTCCTGATGGTGTTGAAGAGGTGGAGCTTGCAAGAATAGAACTTGAGAAAAAGGAACGGGAGCAGAGATTGATTCTTGGGGACATAAGAAAGTTATCCCTTCAGTGTGATACCACTGGAGACCTATATCCAGAAAAGGAAGGGGACTTGTGGATGATAAGTTGTACAAGATCTACTCTGGTGCAAGGACTAAAGAGAGAGCTGGTTAATTCAAAAAAATCTAGGAAAGCTGCATATGCTTCATTAAGAATGGCTCTACATAAGGCTGCTCAGCTACGGCTAATGGAAAAGGAGAAAAACAAAAGTCCATCCTATGCTATGCGCATTTCTTTGCAAATTAACAAAGTGGTTTGGAGCATGCTTGTTGATGGTAAATCTTTTGCCGAGGCTGAGATCAATGACATGATTTATGACTTCGACCGAGATTACAAGGATGTTGGTGTTGCTCAGTTTACAACAAAAAATTTTGTTGTTAGAAACTGCCTCCCAAATGCCAAATCAGATATGCTTTTATCAGCATGGAATCCTCCACCTGAATGGGGAAAAAAAGTTATGCTTCGTGTGGATGCAAAGCAGGGAGCTCCAAAGGATGGAAGTTCTCCTCTGGAACTTTTTGAGGTAGAGATTTATCCTCTCAAGATCCATTTAACAGAAACAATGTACAGAATGATGTGGGGATATTTATTCCCAGAAGAAGAACAGGATTCACAAAGACGGCAGGAAGTTTGGAAGATCTCAACAACTACTGGTACAAAACGTGGAAAGAAAGCTTCTTTAGTCCCCGACATGTCTGCATTTAGCAGTCAAACAATGAAGGAGTCTGAGGGGCCATCCAAATCAAGTGCCTTGGCCCCTAGTACCAGTCAATCCCCTGTTCCTGCAGATTCTGTGCAAGAATCAAAATTGCAAAGTAAAGCACTCATTGCGAGTGGTCCAAATCCTGAGTTAAGAAGAACATCTTCCTTTGACAGATCATGGGAAGAGACTGTTGCTGAATCAGTTGCTACTGAACTTGTCTTACAGAGCATTAGTGGGCCTCTTGGGTCTATTGAACAAGATGAATCCTCTAAGAATAAATTGAAAGATCCAAAAGCTATCAAATCTGGCAGGTCATCCCATGAAGAAAAGAAGGTACAAAAGTCACAAGAAGAAAAAAAATCTGCCAGGCCTCGAAAGATGATGGAGTTTCACAATATCAAGATAAGCCAGGTTGAGCTATGTGTTACCTATGAAGGATCTAGATTTGTGGTAAATGATCTCAAGTTGCTGATGGATACATTTCACCGTGTTGAGTTTACTGGTACTTGGCGGAGACTCTTTTCACGTGTTAAGAAGCACATCATTTGGGGAGTCCTGAAGTCTGTAACTGGAATGCAGGGTAAGAAGTTTAAAGACAAGGCTAACAGTCAGAGAGAACCCAGTGGATCTGGGGTTCCCGATAGTGAGCTTAATTTCAGCGACAATGAAGGCCAGCCAGGACAATCTGATCAGCATCCAATAACCTTTCTCAAGCGCCCAACTGATGGAGCAGGTGATGGATTTGTCACATCCATCAGAGGCCTTTTCAATACTCAGCGTCGTAAGGCCAAGGCATTCGTGCTGCGGACCATGAGGGGTGAAGCTGAGAATGATTTCCAAGGAGATTGGAGTGAAAGTGATGCAGAGTTTTCTCCCTTTGCTAGGCAGCTCACTATAACAAAAGCTAAGAGGCTTATCAGGCGGCACACGAAGAAATTCCGTTCAAGAAAAGGTTCGTCTTCACAACAGAGAGAATCTCTTCCAACATCACCGAGGGAGACCACTCCTTTAGAAAGTGATTCTTCTGGTGGATCCTCACCCTTTGAGGATTTTAACGAGGGATTTAGTGAGGGCAACATGTTGGTTTCCAAAGAGGCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0005575 GO:0005623 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0009267 GO:0009605 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009888 GO:0009932 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010015 GO:0010053 GO:0010054 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0016036 GO:0016043 GO:0016049 GO:0021700 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030154 GO:0030307 GO:0030427 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0032989 GO:0033554 GO:0035618 GO:0035619 GO:0035838 GO:0040007 GO:0040008 GO:0042594 GO:0042995 GO:0044463 GO:0044464 GO:0044706 GO:0045927 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051286 GO:0051704 GO:0051716 GO:0060560 GO:0065007 GO:0070297 GO:0070298 GO:0071496 GO:0071695 GO:0071840 GO:0080147 GO:0090404 GO:0090406 GO:0090558 GO:0090627 GO:0099402 GO:0120025 GO:0120038 GO:1902531 GO:1902532 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Apt1 Fmp27_GFWDK

Protein Analysis

2666

Amino Acids

298.27

Weight (kDa)

8.68

Isoelectric Point (pI)

51.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hobbit	PF10344	4 - 2583	0.0	Hobbit/FMP27/BTLP2 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58250 AT1G58250 AT5G49680
fragaria_vesca	FvH4_5g34390
malus_domestica	MD08G1201600.v1.1 MD08G1201800.v1.1 MD08G1202400.v1.1 MD08G1208300.v1.1 MD15G1388100.v1.1
prunus_persica	Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1
pyrus_communis	pycom15g34840
rosa_chinensis	RchiOBHm_Chr7g0235041
rosa_laevigata	RLG00000001185
rosa_multiflora	Rmu_co8243721.1_g000001 Rmu_sc0002239.1_g000001 Rmu_sc0013687.1_g000001 Rmu_sc0015410.1_g000007
rosa_roxburghii	Rroxscaffold_3G00226360
rosa_rugosa	Rorug07G0287300
rosa_samantha	Rh7AG442100 Rh7BG414600 Rh7CG463100 Rh7DG431700
rosa_wichuraiana	Rw7G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	5 cut(s)	1268, 2000, 3201, 3398, 4443
AarI	CACCTGC	1 cut(s)	7619
Acc16I	TGCGCA	1 cut(s)	6422
Acc36I	ACCTGC	3 cut(s)	4840, 7197, 7619
AccB1I	GGYRCC	1 cut(s)	3263
AccB7I	CCANNNNNTGG	2 cut(s)	6689, 7622
AccI	GTMKAC	2 cut(s)	3606, 4694
AccII	CGCG	4 cut(s)	108, 1093, 4293, 4569
AccIII	TCCGGA	2 cut(s)	626, 3524
AciI	CCGC	9 cut(s)	5, 106, 385, 4319, 4474, 4567, 7408, 7702, 7819
AcoI	YGGCCR	1 cut(s)	5569
AcuI	CTGAAG	9 cut(s)	539, 1695, 2372, 3153, 3266, 4454, 6081, 6185, 7475
AcvI	CACGTG	1 cut(s)	7424
AcyI	GRCGYC	1 cut(s)	470
AdeI	CACNNNGTG	3 cut(s)	57, 1985, 5282
AflIII	ACRYGT	6 cut(s)	1394, 1480, 5862, 6885, 7423, 7974
AhdI	GACNNNNNGTC	1 cut(s)	3972
AhlI	ACTAGT	2 cut(s)	2861, 4787
AjiI	CACGTC	2 cut(s)	1395, 2518
AjnI	CCWGG	8 cut(s)	2139, 2571, 4734, 4979, 5764, 7262, 7305, 7573
AjuI	GAANNNNNNNTTGG	4 cut(s)	1575, 1607, 5505, 5537
AleI	CACNNNNGTG	1 cut(s)	5889
AloI	GAACNNNNNNTCC	2 cut(s)	7515, 7547
Alw21I	GWGCWC	6 cut(s)	1533, 2376, 2836, 3633, 4717, 6682
Alw26I	GTCTC	7 cut(s)	3090, 5447, 5617, 6213, 7076, 7405, 7889
Alw44I	GTGCAC	3 cut(s)	2372, 3629, 4713
AlwNI	CAGNNNCTG	3 cut(s)	1412, 2054, 6986
Ama87I	CYCGRG	1 cut(s)	3117
Aor13HI	TCCGGA	2 cut(s)	626, 3524
ApaI	GGGCCC	1 cut(s)	188
ApaLI	GTGCAC	3 cut(s)	2372, 3629, 4713
ArsI	GACNNNNNNTTYG	4 cut(s)	120, 152, 350, 382
Asp700I	GAANNNNTTC	9 cut(s)	2625, 3279, 3674, 6099, 7057, 7730, 7832, 7849, 7875
AspLEI	GCGC	5 cut(s)	1095, 1296, 4412, 6423, 7614
AsuC2I	CCSGG	2 cut(s)	4679, 5584
AvaI	CYCGRG	1 cut(s)	3117
AvaII	GGWCC	7 cut(s)	234, 3802, 4100, 4355, 5181, 7031, 7704
AxyI	CCTNAGG	1 cut(s)	1861
BaeGI	GKGCMC	5 cut(s)	188, 2376, 2707, 3633, 4717
BaeI	ACNNNNGTAYC	2 cut(s)	7223, 7256
BamHI	GGATCC	2 cut(s)	3409, 7928
BanI	GGYRCC	1 cut(s)	3263
BanII	GRGCYC	4 cut(s)	188, 1533, 5511, 6682
BauI	CACGAG	2 cut(s)	4212, 5878
BbrPI	CACGTG	1 cut(s)	7424
BbsI	GAAGAC	4 cut(s)	312, 473, 1803, 7848
Bbv12I	GWGCWC	6 cut(s)	1533, 2376, 2836, 3633, 4717, 6682
BbvCI	CCTCAGC	1 cut(s)	2541
BceAI	ACGGC	5 cut(s)	381, 5556, 5970, 6392, 6830
BcgI	CGANNNNNNTGC	6 cut(s)	863, 897, 3620, 3654, 6872, 6906
BciT130I	CCWGG	8 cut(s)	2141, 2573, 4736, 4981, 5766, 7264, 7307, 7575
BciVI	GTATCC	3 cut(s)	1366, 5084, 7366
BclI	TGATCA	1 cut(s)	7585
BcnI	CCSGG	2 cut(s)	4679, 5584
BcoDI	GTCTC	7 cut(s)	3090, 5447, 5617, 6213, 7076, 7405, 7889
BcuI	ACTAGT	2 cut(s)	2861, 4787
BfmI	CTRYAG	6 cut(s)	642, 858, 3268, 5346, 5409, 6978
BfoI	RGCGCY	2 cut(s)	4413, 7615
BfuAI	ACCTGC	3 cut(s)	4840, 7197, 7619
BfuI	GTATCC	3 cut(s)	1366, 5084, 7366
BglI	GCCNNNNNGGC	1 cut(s)	4955
BglII	AGATCT	6 cut(s)	2162, 2887, 3215, 5397, 6269, 6831
BlpI	GCTNAGC	1 cut(s)	6369
BmcAI	AGTACT	2 cut(s)	2078, 2613
Bme18I	GGWCC	7 cut(s)	234, 3802, 4100, 4355, 5181, 7031, 7704
BmeRI	GACNNNNNGTC	1 cut(s)	3972
BmeT110I	CYCGRG	1 cut(s)	3117
BmgBI	CACGTC	2 cut(s)	1395, 2518
BmrI	ACTGGG	2 cut(s)	2904, 7512
BmuI	ACTGGG	2 cut(s)	2904, 7512
BpiI	GAAGAC	4 cut(s)	312, 473, 1803, 7848
BplI	GAGNNNNNCTC	2 cut(s)	7858, 7890
BpmI	CTGGAG	4 cut(s)	4101, 5787, 5883, 6237
Bpu10I	CCTNAGC	2 cut(s)	1959, 2541
Bpu1102I	GCTNAGC	1 cut(s)	6369
BpuEI	CTTGAG	9 cut(s)	1040, 3573, 4024, 5027, 5282, 6164, 6719, 7343, 7592
BpuMI	CCSGG	2 cut(s)	4679, 5584
BsaAI	YACGTR	3 cut(s)	2684, 3500, 7424
BsaBI	GATNNNNATC	4 cut(s)	436, 4617, 5760, 7590
BsaHI	GRCGYC	1 cut(s)	470
BsaI	GGTCTC	3 cut(s)	5447, 6213, 7889
BsaWI	WCCGGW	5 cut(s)	626, 2875, 3524, 4523, 5683
Bse21I	CCTNAGG	1 cut(s)	1861
Bse3DI	GCAATG	2 cut(s)	4146, 7020
Bse8I	GATNNNNATC	4 cut(s)	436, 4617, 5760, 7590
BseAI	TCCGGA	2 cut(s)	626, 3524
BseBI	CCWGG	8 cut(s)	2141, 2573, 4736, 4981, 5766, 7264, 7307, 7575
BseJI	GATNNNNATC	4 cut(s)	436, 4617, 5760, 7590
BseMI	GCAATG	2 cut(s)	4146, 7020
BseRI	GAGGAG	9 cut(s)	815, 1854, 4350, 4452, 5279, 5483, 6095, 6098, 6690
BseSI	GKGCMC	5 cut(s)	188, 2376, 2707, 3633, 4717
BseYI	CCCAGC	2 cut(s)	221, 1243
BsgI	GTGCAG	2 cut(s)	2668, 3455
Bsh1236I	CGCG	4 cut(s)	108, 1093, 4293, 4569
Bsh1285I	CGRYCG	1 cut(s)	6520
BshNI	GGYRCC	1 cut(s)	3263
BsiEI	CGRYCG	1 cut(s)	6520
BsiHKAI	GWGCWC	6 cut(s)	1533, 2376, 2836, 3633, 4717, 6682
BsiHKCI	CYCGRG	1 cut(s)	3117
BsiSI	CCGG	8 cut(s)	627, 2668, 2876, 3525, 4524, 4678, 5584, 5684
BslFI	GGGAC	8 cut(s)	1885, 3673, 3815, 4237, 5491, 6194, 6257, 6863
BsmAI	GTCTC	7 cut(s)	3090, 5447, 5617, 6213, 7076, 7405, 7889
BsmFI	GGGAC	8 cut(s)	1885, 3673, 3815, 4237, 5491, 6194, 6257, 6863
BsmI	GAATGC	4 cut(s)	2236, 2602, 7476, 7691
Bso31I	GGTCTC	3 cut(s)	5447, 6213, 7889
BsoBI	CYCGRG	1 cut(s)	3117
Bsp120I	GGGCCC	1 cut(s)	184
Bsp1286I	GDGCHC	9 cut(s)	188, 1533, 2376, 2707, 2836, 3633, 4717, 5511, 6682
Bsp13I	TCCGGA	2 cut(s)	626, 3524
Bsp1407I	TGTACA	5 cut(s)	1191, 1519, 2326, 6263, 6759
Bsp1720I	GCTNAGC	1 cut(s)	6369
Bsp19I	CCATGG	2 cut(s)	3848, 5332
BspACI	CCGC	9 cut(s)	5, 106, 385, 4319, 4474, 4567, 7408, 7702, 7819
BspEI	TCCGGA	2 cut(s)	626, 3524
BspFNI	CGCG	4 cut(s)	108, 1093, 4293, 4569
BspHI	TCATGA	2 cut(s)	727, 4414
BspMAI	CTGCAG	3 cut(s)	5350, 5413, 6982
BspMI	ACCTGC	3 cut(s)	4840, 7197, 7619
BspQI	GCTCTTC	2 cut(s)	71, 3780
BspT107I	GGYRCC	1 cut(s)	3263
BspTNI	GGTCTC	3 cut(s)	5447, 6213, 7889
BsrDI	GCAATG	2 cut(s)	4146, 7020
BsrGI	TGTACA	5 cut(s)	1191, 1519, 2326, 6263, 6759
BssNAI	GTATAC	1 cut(s)	4695
BssNI	GRCGYC	1 cut(s)	470
BssSI	CACGAG	2 cut(s)	4212, 5878
BssT1I	CCWWGG	8 cut(s)	237, 3848, 4536, 4758, 5332, 6945, 7686, 7735
Bst1107I	GTATAC	1 cut(s)	4695
Bst2BI	CACGAG	2 cut(s)	4212, 5878
Bst2UI	CCWGG	8 cut(s)	2141, 2573, 4736, 4981, 5766, 7264, 7307, 7575
BstACI	GRCGYC	1 cut(s)	470
BstAPI	GCANNNNNTGC	2 cut(s)	2702, 7022
BstAUI	TGTACA	5 cut(s)	1191, 1519, 2326, 6263, 6759
BstBAI	YACGTR	3 cut(s)	2684, 3500, 7424
BstDSI	CCRYGG	5 cut(s)	397, 590, 2024, 3848, 5332
BstENI	CCTNNNNNAGG	3 cut(s)	797, 4200, 7777
BstFNI	CGCG	4 cut(s)	108, 1093, 4293, 4569
BstH2I	RGCGCY	2 cut(s)	4413, 7615
BstHHI	GCGC	5 cut(s)	1095, 1296, 4412, 6423, 7614
BstMAI	GTCTC	7 cut(s)	3090, 5447, 5617, 6213, 7076, 7405, 7889
BstMCI	CGRYCG	1 cut(s)	6520
BstNI	CCWGG	8 cut(s)	2141, 2573, 4736, 4981, 5766, 7264, 7307, 7575
BstNSI	RCATGY	8 cut(s)	1484, 3234, 4601, 5732, 5866, 6460, 6889, 7978
BstSFI	CTRYAG	6 cut(s)	642, 858, 3268, 5346, 5409, 6978
BstSLI	GKGCMC	5 cut(s)	188, 2376, 2707, 3633, 4717
BstUI	CGCG	4 cut(s)	108, 1093, 4293, 4569
BstV2I	GAAGAC	4 cut(s)	312, 473, 1803, 7848
BstXI	CCANNNNNNTGG	1 cut(s)	6636
BstZ17I	GTATAC	1 cut(s)	4695
Bsu36I	CCTNAGG	1 cut(s)	1861
BsuI	GTATCC	3 cut(s)	1366, 5084, 7366
BtgI	CCRYGG	5 cut(s)	397, 590, 2024, 3848, 5332
BtrI	CACGTC	2 cut(s)	1395, 2518
BtsI	GCAGTG	3 cut(s)	2978, 5786, 6050
BveI	ACCTGC	3 cut(s)	4840, 7197, 7619
CaiI	CAGNNNCTG	3 cut(s)	1412, 2054, 6986
CciI	TCATGA	2 cut(s)	727, 4414
CfoI	GCGC	5 cut(s)	1095, 1296, 4412, 6423, 7614
CseI	GACGC	2 cut(s)	478, 7664
CspCI	CAANNNNNGTGG	4 cut(s)	2125, 2160, 3801, 3836
DraI	TTTAAA	6 cut(s)	178, 2934, 4077, 4770, 5664, 7489
DraIII	CACNNNGTG	3 cut(s)	57, 1985, 5282
DriI	GACNNNNNGTC	1 cut(s)	3972
EaeI	YGGCCR	1 cut(s)	5569
Eam1105I	GACNNNNNGTC	1 cut(s)	3972
EciI	GGCGGA	1 cut(s)	7423
Ecl136II	GAGCTC	2 cut(s)	1531, 6680
Eco130I	CCWWGG	8 cut(s)	237, 3848, 4536, 4758, 5332, 6945, 7686, 7735
Eco147I	AGGCCT	3 cut(s)	2757, 7267, 7659
Eco24I	GRGCYC	4 cut(s)	188, 1533, 5511, 6682
Eco31I	GGTCTC	3 cut(s)	5447, 6213, 7889
Eco47I	GGWCC	7 cut(s)	234, 3802, 4100, 4355, 5181, 7031, 7704
Eco53kI	GAGCTC	2 cut(s)	1531, 6680
Eco57I	CTGAAG	9 cut(s)	539, 1695, 2372, 3153, 3266, 4454, 6081, 6185, 7475
Eco72I	CACGTG	1 cut(s)	7424
Eco81I	CCTNAGG	1 cut(s)	1861
Eco88I	CYCGRG	1 cut(s)	3117
EcoICRI	GAGCTC	2 cut(s)	1531, 6680
EcoNI	CCTNNNNNAGG	3 cut(s)	797, 4200, 7777
EcoO109I	RGGNCCY	5 cut(s)	184, 185, 3802, 4738, 4948
EcoRI	GAATTC	1 cut(s)	1112
EcoRII	CCWGG	8 cut(s)	2139, 2571, 4734, 4979, 5764, 7262, 7305, 7573
EcoT14I	CCWWGG	8 cut(s)	237, 3848, 4536, 4758, 5332, 6945, 7686, 7735
EcoT22I	ATGCAT	1 cut(s)	3797
EcoT38I	GRGCYC	4 cut(s)	188, 1533, 5511, 6682
ErhI	CCWWGG	8 cut(s)	237, 3848, 4536, 4758, 5332, 6945, 7686, 7735
FaqI	GGGAC	8 cut(s)	1885, 3673, 3815, 4237, 5491, 6194, 6257, 6863
FauI	CCCGC	2 cut(s)	392, 4467
FauNDI	CATATG	6 cut(s)	1524, 1551, 2409, 3911, 4752, 6334
FbaI	TGATCA	1 cut(s)	7585
FblI	GTMKAC	2 cut(s)	3606, 4694
FriOI	GRGCYC	4 cut(s)	188, 1533, 5511, 6682
FspAI	RTGCGCAY	1 cut(s)	6422
FspI	TGCGCA	1 cut(s)	6422
GlaI	GCGC	5 cut(s)	1094, 1295, 4411, 6422, 7613
GsaI	CCCAGC	2 cut(s)	225, 1247
GsuI	CTGGAG	4 cut(s)	4101, 5787, 5883, 6237
HaeII	RGCGCY	2 cut(s)	4413, 7615
HapII	CCGG	8 cut(s)	627, 2668, 2876, 3525, 4524, 4678, 5584, 5684
HgaI	GACGC	2 cut(s)	478, 7664
HhaI	GCGC	5 cut(s)	1095, 1296, 4412, 6423, 7614
Hin1I	GRCGYC	1 cut(s)	470
Hin6I	GCGC	5 cut(s)	1093, 1294, 4410, 6421, 7612
HinP1I	GCGC	5 cut(s)	1093, 1294, 4410, 6421, 7612
HincII	GTYRAC	4 cut(s)	2515, 2955, 5416, 6000
HindII	GTYRAC	4 cut(s)	2515, 2955, 5416, 6000
HindIII	AAGCTT	7 cut(s)	551, 2384, 2840, 3352, 3947, 5645, 6867
HpaI	GTTAAC	1 cut(s)	2955
HpaII	CCGG	8 cut(s)	627, 2668, 2876, 3525, 4524, 4678, 5584, 5684
Hpy99I	CGWCG	3 cut(s)	234, 2250, 7680
Hsp92I	GRCGYC	1 cut(s)	470
HspAI	GCGC	5 cut(s)	1093, 1294, 4410, 6421, 7612
KflI	GGGWCCC	1 cut(s)	3802
Kpn2I	TCCGGA	2 cut(s)	626, 3524
Ksp22I	TGATCA	1 cut(s)	7585
KspAI	GTTAAC	1 cut(s)	2955
LguI	GCTCTTC	2 cut(s)	71, 3780
MfeI	CAATTG	3 cut(s)	1043, 1422, 5113
MhlI	GDGCHC	9 cut(s)	188, 1533, 2376, 2707, 2836, 3633, 4717, 5511, 6682
MmeI	TCCRAC	5 cut(s)	1388, 2527, 4877, 5774, 7904
Mph1103I	ATGCAT	1 cut(s)	3797
MroI	TCCGGA	2 cut(s)	626, 3524
MroXI	GAANNNNTTC	9 cut(s)	2625, 3279, 3674, 6099, 7057, 7730, 7832, 7849, 7875
MslI	CAYNNNNRTG	6 cut(s)	3600, 4314, 4368, 4899, 5889, 6634
MspA1I	CMGCKG	1 cut(s)	1226
MspI	CCGG	8 cut(s)	627, 2668, 2876, 3525, 4524, 4678, 5584, 5684
MunI	CAATTG	3 cut(s)	1043, 1422, 5113
Mva1269I	GAATGC	4 cut(s)	2236, 2602, 7476, 7691
MvaI	CCWGG	8 cut(s)	2141, 2573, 4736, 4981, 5766, 7264, 7307, 7575
MvnI	CGCG	4 cut(s)	108, 1093, 4293, 4569
NciI	CCSGG	2 cut(s)	4679, 5584
NcoI	CCATGG	2 cut(s)	3848, 5332
NdeI	CATATG	6 cut(s)	1524, 1551, 2409, 3911, 4752, 6334
NmeAIII	GCCGAG	4 cut(s)	1855, 1862, 3733, 6508
NsbI	TGCGCA	1 cut(s)	6422
NsiI	ATGCAT	1 cut(s)	3797
NspI	RCATGY	8 cut(s)	1484, 3234, 4601, 5732, 5866, 6460, 6889, 7978
OliI	CACNNNNGTG	1 cut(s)	5889
PaeI	GCATGC	1 cut(s)	6460
PaeR7I	CTCGAG	1 cut(s)	3117
PagI	TCATGA	2 cut(s)	727, 4414
PaqCI	CACCTGC	1 cut(s)	7619
PceI	AGGCCT	3 cut(s)	2757, 7267, 7659
PciI	ACATGT	4 cut(s)	1480, 5862, 6885, 7974
PciSI	GCTCTTC	2 cut(s)	71, 3780
PcsI	WCGNNNNNNNCGW	2 cut(s)	4492, 5399
PctI	GAATGC	4 cut(s)	2236, 2602, 7476, 7691
PdmI	GAANNNNTTC	9 cut(s)	2625, 3279, 3674, 6099, 7057, 7730, 7832, 7849, 7875
PflMI	CCANNNNNTGG	2 cut(s)	6689, 7622
PfoI	TCCNGGA	1 cut(s)	5764
PmaCI	CACGTG	1 cut(s)	7424
PmlI	CACGTG	1 cut(s)	7424
Ppu21I	YACGTR	3 cut(s)	2684, 3500, 7424
PpuMI	RGGWCCY	1 cut(s)	3802
PscI	ACATGT	4 cut(s)	1480, 5862, 6885, 7974
PsiI	TTATAA	5 cut(s)	1268, 2000, 3201, 3398, 4443
Psp124BI	GAGCTC	2 cut(s)	1533, 6682
Psp5II	RGGWCCY	1 cut(s)	3802
Psp6I	CCWGG	8 cut(s)	2139, 2571, 4734, 4979, 5764, 7262, 7305, 7573
PspCI	CACGTG	1 cut(s)	7424
PspFI	CCCAGC	2 cut(s)	221, 1243
PspGI	CCWGG	8 cut(s)	2139, 2571, 4734, 4979, 5764, 7262, 7305, 7573
PspOMI	GGGCCC	1 cut(s)	184
PspPPI	RGGWCCY	1 cut(s)	3802
PsrI	GAACNNNNNNTAC	6 cut(s)	2060, 2092, 4833, 4865, 7101, 7133
PstI	CTGCAG	3 cut(s)	5350, 5413, 6982
PstNI	CAGNNNCTG	3 cut(s)	1412, 2054, 6986
PvuII	CAGCTG	1 cut(s)	1226
RseI	CAYNNNNRTG	6 cut(s)	3600, 4314, 4368, 4899, 5889, 6634
SacI	GAGCTC	2 cut(s)	1533, 6682
SapI	GCTCTTC	2 cut(s)	71, 3780
ScaI	AGTACT	2 cut(s)	2078, 2613
SduI	GDGCHC	9 cut(s)	188, 1533, 2376, 2707, 2836, 3633, 4717, 5511, 6682
SfcI	CTRYAG	6 cut(s)	642, 858, 3268, 5346, 5409, 6978
Sfr274I	CTCGAG	1 cut(s)	3117
SinI	GGWCC	7 cut(s)	234, 3802, 4100, 4355, 5181, 7031, 7704
SlaI	CTCGAG	1 cut(s)	3117
SmiI	ATTTAAAT	1 cut(s)	5664
SmiMI	CAYNNNNRTG	6 cut(s)	3600, 4314, 4368, 4899, 5889, 6634
SpeI	ACTAGT	2 cut(s)	2861, 4787
SphI	GCATGC	1 cut(s)	6460
SseBI	AGGCCT	3 cut(s)	2757, 7267, 7659
SsiI	CCGC	9 cut(s)	5, 106, 385, 4319, 4474, 4567, 7408, 7702, 7819
SspI	AATATT	6 cut(s)	424, 1381, 2586, 3463, 3919, 5158
SstI	GAGCTC	2 cut(s)	1533, 6682
StuI	AGGCCT	3 cut(s)	2757, 7267, 7659
StyI	CCWWGG	8 cut(s)	237, 3848, 4536, 4758, 5332, 6945, 7686, 7735
SwaI	ATTTAAAT	1 cut(s)	5664
TaqII	GACCGA	2 cut(s)	222, 6534
TauI	GCSGC	3 cut(s)	8, 108, 7822
TspGWI	ACGGA	7 cut(s)	1141, 1385, 2962, 3927, 5364, 5374, 7826
Van91I	CCANNNNNTGG	2 cut(s)	6689, 7622
VneI	GTGCAC	3 cut(s)	2372, 3629, 4713
VpaK11BI	GGWCC	7 cut(s)	234, 3802, 4100, 4355, 5181, 7031, 7704
XagI	CCTNNNNNAGG	3 cut(s)	797, 4200, 7777
XbaI	TCTAGA	2 cut(s)	1642, 7337
XceI	RCATGY	8 cut(s)	1484, 3234, 4601, 5732, 5866, 6460, 6889, 7978
XcmI	CCANNNNNNNNNTGG	5 cut(s)	283, 454, 2733, 2985, 3995
XhoI	CTCGAG	1 cut(s)	3117
XmiI	GTMKAC	2 cut(s)	3606, 4694
XmnI	GAANNNNTTC	9 cut(s)	2625, 3279, 3674, 6099, 7057, 7730, 7832, 7849, 7875
ZrmI	AGTACT	2 cut(s)	2078, 2613
Zsp2I	ATGCAT	1 cut(s)	3797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.