Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0006211

Physical Location & Seq

Genomic Coordinates Forward (+)

61848777 .. 61872023

Gene Structure 23247 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG463100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 7983 bp

ATGGCGGCTTCCCCCGTCAAGTTCCTCTTCGGTTTCTTGATCCTCTGCATCACATTGTGGTTGCTCTTCATATTTGCTTCAAGGTTTATAGCTTGGATTTTAAGCCGTGTATTAGGAGCATCTGTCAAATTTCGGGTCGCTGGATGGGTATTTGTCAGGGATGTTGTGGTGAAGTTTAAAAAGGGCCCTGTTGAATCTATTTCCATTGGGGAAATTAAACCCAGCATACGTCGGTCCTTGGTCAAACTAGGGGTTGGTTTTATTTCTAAAGATCCCAAGTTGCAAGTGGTAATATCTGACTTGGAAGTTGTAATGAGGTCTTCAAATAAGAGTACACCAAAGGCAAAGGCAAAGGCCAAGTCTGGATCTCGAAAATCCCGCAATTCAGGCCGTGGAAAGTGGATGGTAGGGGCCAATATTGCACGATATTTATCTGTTTCCATCACAGACTTGGTTTTGAAGACGCCAAAAATTTCCATTGAAGTAAAGGAATTGAAAGTGGACATATCTAAAGATGGTACATCCAAGCAAAATCTTATTGTCAAGCTACAGATATTACCTATTGTTGTTCAAAGGAATGAACCACGGGCCAGTTGTGACCAGTCATCCAGTTTTTGCACCGGAGAATCCCTTTCTGTAAGCCAGTCATCATCTGCTTTGGTGGACAGGTCATCTACTCTTTTTGTCTGTGAAGAATTTTTGCTCTCGTGTGAATTTGGTCATGATAGGGAAGTTGGTGTAATCTTCAAGAATGTGGATATTTCTAGTGGAGAGGTCAATGTGAACCTGAACGAGGAGCTACTTTCAAAAAGCAAAAGCTCATCAAACACTTCATCTGACCCTGATAAAGCTATAGAATCCTCCACCGATTCTATTGCTTCTAAGAAGGCACAAAAAAAGCAACAAATGAGTGATGCGATCTCAAAATGCACCACTTTATTTCCTGAAAAGGTTTCCTTCAATTTGCCAAAACTGGATGTGAGATTTGAGCATCGGGAACATGATTTTGCTCTTGAGAATAACATCATGGGCATCCAATTGAAAAGCATCAAATCACAATCAAGTGAAGATGTGGGAGAAAGCACGCGCCTTGATGTTCAATTAGAATTCAGCGAGATTCATCTGCTTAGAGAAGCTGGCACTTCTGTTTTGGAGATACTGAAACTTGATGTTATCTCATTTTTGTACATTCCAATACAGCCAAGCTCTCCTATTAGAGCTGAAATTGATGTAAAGCTGGGTGGTACTCAATGCAACCTTATAGTGAACAGATTAAAGCCATTGTTGCGCCTCCACTTCTCGAAAAAGAAAAGAATGGTACTTCGGGATGAAAAGCCTACTCTTGACAAGACATCTCCAACAATGGATACCAATATTATCATGTGGACATGTACTTTTTCAGCCCCTGAGATGACAATTGTGCTTCATAGCCTCAGTGGTTTGCCACTCTATCATGTCTGCTCACAATCATCACATGTATTTGCAAATAACATATCAAATACTGGAACTACTGTACATATGGAGCTCGGTGAACTTAATTTGCATATGGCGGATGAATACCAACAATGCTTGAAAGAAAACCTTTTTGGTGTGGAATCAAATTCAGGTTCCATAGTCAATGTTGCAAAGGTTAGTCTAGATTGGGGCAAAAAGGACATGGAATCATCTGAAGAAGGTGCTTCTAAAAGTAAATTAGTTTTATCTGTTGATGTGACTGGTATGGCTGTTTATTTTACTTTCAAGCGTGTTGAGTCGTTTATATCAACTGCCATGTCATTTCAAGCACTTTTTAAGAATTTGTCGTCTTCTGAAAAAAGAACATCACAAAGCCGAGGAGGGCGATCATCGAAATCCTCAGGGAAAGGGACTCGGCTATTGAAATTAAATCTTGAACGGTGTTCTTTGAATTTCTGTGGTGAGGTGGGTTTAGAAAAAATGGTTGTTCCAGATCCTAAGCGTGTAAATTATGGGTCACAAGGTGGTCGAATTGTTATAAGTGAGTCGGCTGATGGCACTCAACGGGTTGCAGAAGTAATTTCCACAGTATCTGATGATTGTAAGAACTTAAAGTACTCCATTTCTCTTGACATCTTCCATTTCAGCTTATGTGTGAACAAGGAAAAACAATCCACCCAGGTTGAACTTGAAAGAGCCAGATCTATCTATCAGGACTACTTGGAGGAACATAAGCCCGAACCAAAATTGGTACTGTTTGATATGCAGAATGCTAAATTTGTACGACGTTCTGGTGGTCTTAAAGAGATTGCTGTCTGCTCTCTTTTCAGTGCTACTGATATTACGATTAGATGGGAGCCTGATGTACATTTATCACTAATTGAACTTGGACTTCGATTGAAGTTACTGGTGCACAATCAGAAGCTTCAGGTACACGGTAAAGAACATATGGAAAATGTATCTAGCATGAGCAACTCCGAACAGAAGAAAGAAGCCATTACAGAACCAGTAAATTTAGACAAGCAAAAGAAAAGGGAATCTATCTTTGCTGTTGATGTGGAAATGCTGAATGTTTATGCTGAGGTTGGAGATGGAGTTGATGCAGTAGTCCAGGTGCAGTCAATATTTTCTGAGAATGCTCGCATAGGAGTACTTCTGGAAGGATTTCTGCTTTGTTTCAATGGGTGCAGAATACTCAAAAGTAGCCGGATGCAAATTTCATGTATTCCTAGTGCCTCTTGTGCCCCTGATGCGAAAATTCCTCCATCTACCACATGGGATTGGGTAATTCAAGGCCTTGATGTTCATATTTGCTTACCATACAGGTTAGAATTGCGTGCCATTGATGATTCTGTTGAAGAGATGCTGCGTGCTCTAAAGCTTGTAGCTGCTGCTAAAACTAGTCTTATCTTTCCGGTGAAGAAAGATCTTTCAAAAGCTAAGAAGCCCAGTTCAGTAAAATTTGGGTGTTTAAAGTTTTTAATACGGAAGTTAACTTTTGATATTGAAGAAGAACCACTGCAAGGTTGGCTTGATGAGCACTATCTCTTAATGAAGAATGAGGCATCTGAGTTAGCTGTTAGGTTGAAGTTGCTTGATGAATTTATTTCCAAAGTCAGCCAGTCTCCCAAGCCCACTGAAACAAATGATTCTACTCGAGAAAGAAAGACTTTCTTTAATGGAGTTGAGATTGACATACAAGATCCTTCAGCAGTTAGTAAGATGCAAGAAGAAATTTATAAACAATCATTCAGATCTTATTACAAGGCATGTCAGAATCTAGCACAATCAGAGGGTTCAGGTGCTTGTAGGGAAGGGCTTCAGGCTGGTTTTAAGCCTAGTACATCCAGAACTTCTCTTCTGTCTATATCAGCAACAGATTTAGATGTAAGCTTGACATTGATTGATGGTGGTGATGATGGGATGATAGATGTTATAAAGATGCTGGATCCTGTCTGTCGTGAAAATAATATACCATTTTCTAAACTTTATGGGGGTAATATTCTCCTGCACACAGGCTCACTTGTGGTTCAGCTACGTGACTTTACATTTCCTCTCTTGTCCGGAACTTCTGGTAAATGTGAAGGTCGCCTTGTGCTAGGACAGCAGGCAACAAGTTTTCAGCCTCAAGTACACAAAGATGTCTACATTGGGAAATGGAGAAAGGTGCACTTGCTTCGTTCTGCTACTGGTACAACTCCACCTATGAAAACATTCACAGATTTGTCCCTACGTTTTCAGAAAGCCGAGGTGTCCTTTGGAGTGGGATATGAACCACCTTTCGCTGATGTGAGTTATGCGTTTACCGTGGCTCTTCGCAGGGCTAATCTATGCATTAGGGACCCTAATCCACAACCCTTGCCGCCAAAGAAGGAAAAGAGCTTGCCATGGTGGGATGATATGAGAAACTACATTCATGGAAACATCAAGATTCTCTTTTCTGAAACCATATGGAATATTCTTGCGACTACTGATCCGTATGAAAAGCTTGACAAACTTCAAGTAACAGCTAGTCCTATGGAGATCCAGCAGTCAGATGGTCGTATTCATGTTTCTGCGAATGATTTTAAGGTTTTCTCAAGCAGTTTGGACACTCTGGCAAATAATCGTGGTTTAAAACTTCCTAAAGGTATATCTGGTCCTGTAATAGAAGCTCCAGCATTAACTGTTGAAGTTACAATGGATTGGGAATGTGAGTCTGGAAATCCTATGGATCATTATTTATTTGCACTTCCTATTGAAGGGAAACCTCGTGAAACGGTGTTTGATCCATTCAGATCCACCTCTCTCTCCCTTCGCTGGAATATCTTGCTTAGACGCTCTCCCTTACGCGAGAAACAAGCTTCACATTCTAATGCGGTAGATGGTGTAGATGTAGATGGAACTGTTTACGGTCCTCCTCATAAGGAAGAGAATGTTTCCAGTCTTCCACCAACAGTGAATGTTGGCGCTCATGATCTAGCATGGATTCTGAAGTTTTATAACATGCATTATCTTCCTCCTCACAAATTGCGGGCCTTTGCTCGTTTTCCTCGTTTTGGAGTTCCAAGAATCCCTAGATCCGGTAACTTGTCCTTAGACAGAGTGATGACAGAATTTATGCTCCGCATTGATGCTTCGCCTACTTGTATAAAGCATGTACCTTTAGATGATGACGATCCAGCTAAAGGACTGACATTCTTAATGACAAAGTTGAAATTGGAAATGTGTTCGAGCCGGGGTAAGCAAAAGTATACTTTTGATTGCAAGCGTGCACCTCTTGATCTTGTTTACCAGGGCCTTGACCTTCATATGCCCAAGGCATTTTTAAACAGAGAAGAAAGCACTAGTGTTGCAAAAGTAGTTCAAATGACGATAAAAAACACACAACCTGCATCAGTAGATAGAGTTCCAACTGAAAAGAGTAGCAACATGAGTAGTGGCACAGAGAAGCATCGTGATGATGGATTTCTATTGTCATCAGAGTATTTCACGATCAGAAGGCAGGCCCCAAAGGCTGATCCTGTTAGTTTATTAGCTTGGCAAGAGGCTGGAAGAAAAAATCTTGAGATGACTTATGTGAGGTCTGAATTTGAAAATGGAAGTGAGAGTGACGAGCATACCCGATCTGATCCAAGTGATGATGATGGATACAATGTGGTAATAGCTGACAATTGCCAACGTATATTTGTGTATGGACTCAAACTTCTGTGGAATATTGAGAATAGAGATGCTGTTTGGTCCTTTGTTGGTGGTCTATCCAAAGCATTTCAAGCCCCCAAACCTTCTCCCTCTAGGCAGTATGCACAAAAGAAATTACTGGAGGAGCAGCAGTCACATAGTGGAGGTGAAATGCAGCAAGATGGTAGCTCTAAGCCCACCACTACCAGCCATGGTGCTGCTTCTGCAGAGGTATCTGGTTCACTATCATCTCCGTCACCTTCCGTCAAATCGGAGATCTTGTCATCTGCAGTTGACGACTCTTCATCTGGTGTAGTAGTAGAAAAGCATAGAGAGACCAAAGATGCAGAGGAGGACGGGACTCGTCATTTCATGGTGAATGTTATTGAGCCCCAGTTCAATCTTCATTCTGAAGATGCCAATGGAAGGTTTTTGCTTGCTGCTGTTAGTGGCCGTGTTTTGGCCCGGTCATTTCATTCAGTTCTTCATGTTGGCTATGAGATGATTGAGAAGCTTCGTAATGATAATTTAAATATACCAGAATGTGAACCAGAAATGACATGGAAACGCATGGAGTTTTCTGTAATGTTAGAGCATGTTCAAGCTCATGTTGCTCCAACAGATGTTGATCCTGGAGCTGGATTGCAGTGGCTTCCAAAAATTCGTAGAAGCTCTCCAAAAGTAAAACGTACTGGTGCTTTACTTGAAAGGGTATTTATGCCCTGTGACATGTACTTTCGCTACACAAGGCACAAAGGTGGAACTCCAGAGTTGAAGGTGAAGCCCTTAAAAGAGCTGACTTTCAATTCCCATAATATCACGGCAACAATGACCTCTCGCCAATTTCAAGTTATGCTAGATGTGTTGACAAATCTTCTTTTTGCACGACTTCCCAAGCCTAGAAAAAGTAGTCTGTCACTGCCTGCTGAAGATGATGAAGATGTGGAGGAGGAGTCAGACGAAGTGGTTCCTGATGGTGTTGAAGAGGTGGAGCTTGCAAGAATAGAACTTGAGAAAAAGGAACGGGAGCAGAGATTGATTCTTGGGGACATAAGAAAGTTATCCCTTCACTGTGATACCACTGGAGACCTATATCCAGAAAAGGAAGGGGACTTGTGGATGATAAGTTGTACAAGATCTACTCTGGTGCAAGGACTAAAGAGAGAGCTGGTTAATTCAAAAAAATCTAGGAAAGCTGCGTATGCTTCATTAAGAATGGCTCTACATAAGGCTGCTCAGCTACGGCTAATGGAAAAGGAGAAAAACAAAAGTCCATCCTATGCTATGCGCATTTCTTTGCAAATTAACAAAGTGGTTTGGAGCATGCTTGTTGATGGTAAATCTTTTGCCGAGGCGGAGATCAATGACATGATTTATGACTTCGACCGAGATTACAAGGATGTTGGTGTTGCTCAGTTTACAACAAAAAATTTTGTTGTTAGAAACTGCCTCCCAAATGCCAAATCAGATATGCTTTTATCAGCATGGAATCCTCCACCTGAATGGGGAAAAAAAGTTATGCTTCGTGTGGATGCAAAGCAGGGAGCTCCAAAGGATGGAAGTTCTCCTTTGGAACTTTTTGAGGTAGAGATTTATCCTCTCAAGATCCATTTAACAGAAACAATGTACAGAATGATGTGGGGATATTTATTCCCAGAAGAAGAACAGGATTCACAAAGACGGCAGGAAGTTTGGAAGATCTCAACAACTACTGGTACAAAACGTGGAAAGAAAGCTTCTTTAGTCCCTGACATGTCTGCATTTAGCAGTCAAACAATGAAGGAGTCTGAGGGGTCATCCAAATTAAGTGCCTTGGCCCCTGGTACCAGTCAATCCCCTGTTCCTGCAGATTCTGTACAAGAATCAAAATTGCAAAGTAAAGCACTCATTGCGAGTGGTCCAAATCCTGAGTTAAGAAGAACATCTTCCTTTGACAGATCATGGGAAGAGACTGTTGCAGAATCAGTTGCTACTGAACTTGTCTTACAGAGCATTAGTGGGCCTCTTGGGTCTATTGAACAAGATGAATCCTCTAAGAATAAATTGAAAGATCCCAAAGCTATCAAATCTGGCAGGTCATCCCATGAAGAAAAGAAGGTACAAAAGTCACAAGAAGAGAAAAAATCTGCCAGGCCTCGAAAGATGATGGAGTTTCACAATATCAAGATAAGCCAGGTTGAGCTATGTGTTACCTATGAAGGATCTAGATTTGTGGTAAATGATCTCAAGTTGCTGATGGATACATTTCATCGTGTTGAGTTTACTGGTACTTGGCGGAGACTTTTTTCACGTGTTAAGAAGCACATCATTTGGGGAGTCCTGAAGTCTGTAACTGGAATGCAGGGTAAGAAGTTTAAAGACAAGGCTAACAGTCAGAGAGAACCCAGTGGATCTGGGGTTCCCGATAGTGAGCTTAATTTCAGCGACAATGAAGGCCAGCCAGGACAATCTGATCAACATCCAATAACCTTTCTCAAGCGCCCAACTGATGGAGCAGGTGATGGATTTGTCACATCCATCAGAGGCCTTTTCAATACTCAGCGTCGTAAGGCCAAGGCATTTGTGCTGCGGACCATGAGGGGTGAAGCTGAGAATGATTTCCAAGGAGATTGGAGTGAAAGTGATGCAGAGTTTTCTCCCTTTGCTAGGCAGCTCACTATAACAAAAGCTAAGAGGCTTATCAGGCGGCACACGAAGAAATTCCGTTCAAGAAAAGGTTCGTCTTCACAACAGAGAGAATCTCTTCCAACATCACCGAGGGAGACCACTCCTTTAGAAAGTGATTCTTCTGGTGGATCCTCACCCTTTGAGGATTTTAACGATGGATTTAATGAGGGCAACATGTTGGTTTCCAAAGAGGCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0005575 GO:0005623 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0009267 GO:0009605 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009888 GO:0009932 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010015 GO:0010053 GO:0010054 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0016036 GO:0016043 GO:0016049 GO:0021700 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030154 GO:0030307 GO:0030427 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0032989 GO:0033554 GO:0035618 GO:0035619 GO:0035838 GO:0040007 GO:0040008 GO:0042594 GO:0042995 GO:0044463 GO:0044464 GO:0044706 GO:0045927 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051286 GO:0051704 GO:0051716 GO:0060560 GO:0065007 GO:0070297 GO:0070298 GO:0071496 GO:0071695 GO:0071840 GO:0080147 GO:0090404 GO:0090406 GO:0090558 GO:0090627 GO:0099402 GO:0120025 GO:0120038 GO:1902531 GO:1902532 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Apt1 Fmp27_GFWDK

Protein Analysis

2660

Amino Acids

297.79

Weight (kDa)

8.62

Isoelectric Point (pI)

51.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hobbit	PF10344	4 - 2577	0.0	Hobbit/FMP27/BTLP2 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58250 AT1G58250 AT5G49680
fragaria_vesca	FvH4_5g34390
malus_domestica	MD08G1201600.v1.1 MD08G1201800.v1.1 MD08G1202400.v1.1 MD08G1208300.v1.1 MD15G1388100.v1.1
prunus_persica	Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1
pyrus_communis	pycom15g34840
rosa_chinensis	RchiOBHm_Chr7g0235041
rosa_laevigata	RLG00000001185
rosa_multiflora	Rmu_co8243721.1_g000001 Rmu_sc0002239.1_g000001 Rmu_sc0013687.1_g000001 Rmu_sc0015410.1_g000007
rosa_roxburghii	Rroxscaffold_3G00226360
rosa_rugosa	Rorug07G0287300
rosa_samantha	Rh7AG442100 Rh7BG414600 Rh7CG463100 Rh7DG431700
rosa_wichuraiana	Rw7G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	1994, 3195, 3392, 4437
AarI	CACCTGC	1 cut(s)	7601
Acc16I	TGCGCA	1 cut(s)	6404
Acc36I	ACCTGC	3 cut(s)	4834, 7179, 7601
Acc65I	GGTACC	1 cut(s)	6938
AccB1I	GGYRCC	1 cut(s)	6938
AccB7I	CCANNNNNTGG	2 cut(s)	6671, 7604
AccI	GTMKAC	2 cut(s)	3600, 4688
AccII	CGCG	2 cut(s)	1087, 4287
AccIII	TCCGGA	1 cut(s)	3518
AcoI	YGGCCR	1 cut(s)	5566
AcuI	CTGAAG	8 cut(s)	1689, 2366, 3147, 3260, 4448, 5547, 6063, 7457
AcvI	CACGTG	1 cut(s)	7406
AcyI	GRCGYC	1 cut(s)	464
AdeI	CACNNNGTG	3 cut(s)	57, 1979, 5276
AflIII	ACRYGT	6 cut(s)	1388, 1474, 5844, 6867, 7405, 7956
AhlI	ACTAGT	2 cut(s)	2855, 4781
AjnI	CCWGG	8 cut(s)	2133, 2565, 4728, 5746, 6934, 7244, 7287, 7555
AjuI	GAANNNNNNNTTGG	2 cut(s)	1569, 1601
AleI	CACNNNNGTG	1 cut(s)	5871
AloI	GAACNNNNNNTCC	2 cut(s)	7497, 7529
Alw21I	GWGCWC	7 cut(s)	1527, 2370, 2830, 2997, 3627, 4711, 6664
Alw26I	GTCTC	6 cut(s)	3084, 5444, 6195, 7058, 7387, 7871
Alw44I	GTGCAC	3 cut(s)	2366, 3623, 4707
AlwNI	CAGNNNCTG	3 cut(s)	1406, 2048, 6968
Ama87I	CYCGRG	1 cut(s)	3111
Aor13HI	TCCGGA	1 cut(s)	3518
ApaI	GGGCCC	1 cut(s)	188
ApaLI	GTGCAC	3 cut(s)	2366, 3623, 4707
ArsI	GACNNNNNNTTYG	4 cut(s)	120, 152, 344, 376
Asp700I	GAANNNNTTC	9 cut(s)	2619, 3273, 3668, 6081, 7039, 7712, 7814, 7831, 7857
Asp718I	GGTACC	1 cut(s)	6938
AspLEI	GCGC	5 cut(s)	1089, 1290, 4406, 6405, 7596
AsuC2I	CCSGG	2 cut(s)	4673, 5581
AvaI	CYCGRG	1 cut(s)	3111
AvaII	GGWCC	7 cut(s)	234, 3796, 4094, 4349, 5175, 7013, 7686
AxyI	CCTNAGG	1 cut(s)	1855
BaeGI	GKGCMC	5 cut(s)	188, 2370, 2701, 3627, 4711
BaeI	ACNNNNGTAYC	2 cut(s)	7205, 7238
BamHI	GGATCC	2 cut(s)	3403, 7910
BanI	GGYRCC	1 cut(s)	6938
BanII	GRGCYC	4 cut(s)	188, 1527, 5508, 6664
BauI	CACGAG	2 cut(s)	706, 4206
BbrPI	CACGTG	1 cut(s)	7406
BbsI	GAAGAC	5 cut(s)	312, 467, 1797, 4373, 7830
Bbv12I	GWGCWC	7 cut(s)	1527, 2370, 2830, 2997, 3627, 4711, 6664
BbvCI	CCTCAGC	1 cut(s)	2535
BceAI	ACGGC	6 cut(s)	90, 375, 5553, 5952, 6374, 6812
BcgI	CGANNNNNNTGC	4 cut(s)	857, 891, 3614, 3648
BciT130I	CCWGG	8 cut(s)	2135, 2567, 4730, 5748, 6936, 7246, 7289, 7557
BciVI	GTATCC	3 cut(s)	1360, 5078, 7348
BclI	TGATCA	1 cut(s)	7567
BcnI	CCSGG	2 cut(s)	4673, 5581
BcoDI	GTCTC	6 cut(s)	3084, 5444, 6195, 7058, 7387, 7871
BcuI	ACTAGT	2 cut(s)	2855, 4781
BfmI	CTRYAG	5 cut(s)	548, 852, 5340, 5403, 6960
BfoI	RGCGCY	2 cut(s)	4407, 7597
BfuAI	ACCTGC	3 cut(s)	4834, 7179, 7601
BfuI	GTATCC	3 cut(s)	1360, 5078, 7348
BglI	GCCNNNNNGGC	1 cut(s)	4949
BglII	AGATCT	6 cut(s)	2156, 2881, 3209, 5391, 6251, 6813
BlpI	GCTNAGC	1 cut(s)	6351
BmcAI	AGTACT	2 cut(s)	2072, 2607
Bme18I	GGWCC	7 cut(s)	234, 3796, 4094, 4349, 5175, 7013, 7686
BmeT110I	CYCGRG	1 cut(s)	3111
BmrI	ACTGGG	3 cut(s)	2898, 5503, 7494
BmuI	ACTGGG	3 cut(s)	2898, 5503, 7494
BpiI	GAAGAC	5 cut(s)	312, 467, 1797, 4373, 7830
BplI	GAGNNNNNCTC	2 cut(s)	7840, 7872
BpmI	CTGGAG	5 cut(s)	4095, 5276, 5769, 5865, 6219
Bpu10I	CCTNAGC	2 cut(s)	1953, 2535
Bpu1102I	GCTNAGC	1 cut(s)	6351
BpuEI	CTTGAG	8 cut(s)	1034, 3567, 4018, 5021, 6146, 6701, 7325, 7574
BpuMI	CCSGG	2 cut(s)	4673, 5581
BsaAI	YACGTR	2 cut(s)	3494, 7406
BsaBI	GATNNNNATC	4 cut(s)	430, 4611, 5742, 7572
BsaHI	GRCGYC	1 cut(s)	464
BsaI	GGTCTC	3 cut(s)	5444, 6195, 7871
BsaWI	WCCGGW	4 cut(s)	620, 2869, 3518, 4517
Bse21I	CCTNAGG	1 cut(s)	1855
Bse3DI	GCAATG	1 cut(s)	7002
Bse8I	GATNNNNATC	4 cut(s)	430, 4611, 5742, 7572
BseAI	TCCGGA	1 cut(s)	3518
BseBI	CCWGG	8 cut(s)	2135, 2567, 4730, 5748, 6936, 7246, 7289, 7557
BseJI	GATNNNNATC	4 cut(s)	430, 4611, 5742, 7572
BseMI	GCAATG	1 cut(s)	7002
BseRI	GAGGAG	8 cut(s)	809, 1848, 4344, 4446, 5273, 5480, 6077, 6080
BseSI	GKGCMC	5 cut(s)	188, 2370, 2701, 3627, 4711
BseYI	CCCAGC	2 cut(s)	221, 1237
BsgI	GTGCAG	3 cut(s)	2591, 2662, 3449
Bsh1236I	CGCG	2 cut(s)	1087, 4287
Bsh1285I	CGRYCG	1 cut(s)	6502
BshNI	GGYRCC	1 cut(s)	6938
BsiEI	CGRYCG	1 cut(s)	6502
BsiHKAI	GWGCWC	7 cut(s)	1527, 2370, 2830, 2997, 3627, 4711, 6664
BsiHKCI	CYCGRG	1 cut(s)	3111
BsiSI	CCGG	7 cut(s)	621, 2662, 2870, 3519, 4518, 4672, 5581
BslFI	GGGAC	7 cut(s)	1879, 3667, 3809, 5488, 6176, 6239, 6845
BsmAI	GTCTC	6 cut(s)	3084, 5444, 6195, 7058, 7387, 7871
BsmFI	GGGAC	7 cut(s)	1879, 3667, 3809, 5488, 6176, 6239, 6845
BsmI	GAATGC	3 cut(s)	2230, 2596, 7458
Bso31I	GGTCTC	3 cut(s)	5444, 6195, 7871
BsoBI	CYCGRG	1 cut(s)	3111
Bsp120I	GGGCCC	1 cut(s)	184
Bsp13I	TCCGGA	1 cut(s)	3518
Bsp1407I	TGTACA	6 cut(s)	1185, 1513, 2320, 6245, 6741, 6970
Bsp1720I	GCTNAGC	1 cut(s)	6351
Bsp19I	CCATGG	2 cut(s)	3842, 5326
BspEI	TCCGGA	1 cut(s)	3518
BspFNI	CGCG	2 cut(s)	1087, 4287
BspHI	TCATGA	2 cut(s)	721, 4408
BspMAI	CTGCAG	3 cut(s)	5344, 5407, 6964
BspMI	ACCTGC	3 cut(s)	4834, 7179, 7601
BspQI	GCTCTTC	2 cut(s)	71, 3774
BspT107I	GGYRCC	1 cut(s)	6938
BspTNI	GGTCTC	3 cut(s)	5444, 6195, 7871
BsrDI	GCAATG	1 cut(s)	7002
BsrGI	TGTACA	6 cut(s)	1185, 1513, 2320, 6245, 6741, 6970
BssNAI	GTATAC	1 cut(s)	4689
BssNI	GRCGYC	1 cut(s)	464
BssSI	CACGAG	2 cut(s)	706, 4206
BssT1I	CCWWGG	7 cut(s)	237, 3842, 4752, 5326, 6927, 7668, 7717
Bst1107I	GTATAC	1 cut(s)	4689
Bst2BI	CACGAG	2 cut(s)	706, 4206
Bst2UI	CCWGG	8 cut(s)	2135, 2567, 4730, 5748, 6936, 7246, 7289, 7557
BstACI	GRCGYC	1 cut(s)	464
BstAPI	GCANNNNNTGC	1 cut(s)	7004
BstAUI	TGTACA	6 cut(s)	1185, 1513, 2320, 6245, 6741, 6970
BstBAI	YACGTR	2 cut(s)	3494, 7406
BstDSI	CCRYGG	5 cut(s)	391, 584, 3762, 3842, 5326
BstENI	CCTNNNNNAGG	3 cut(s)	791, 4194, 7759
BstFNI	CGCG	2 cut(s)	1087, 4287
BstH2I	RGCGCY	2 cut(s)	4407, 7597
BstHHI	GCGC	5 cut(s)	1089, 1290, 4406, 6405, 7596
BstMAI	GTCTC	6 cut(s)	3084, 5444, 6195, 7058, 7387, 7871
BstMCI	CGRYCG	1 cut(s)	6502
BstNI	CCWGG	8 cut(s)	2135, 2567, 4730, 5748, 6936, 7246, 7289, 7557
BstSFI	CTRYAG	5 cut(s)	548, 852, 5340, 5403, 6960
BstSLI	GKGCMC	5 cut(s)	188, 2370, 2701, 3627, 4711
BstUI	CGCG	2 cut(s)	1087, 4287
BstV2I	GAAGAC	5 cut(s)	312, 467, 1797, 4373, 7830
BstXI	CCANNNNNNTGG	1 cut(s)	6618
BstZ17I	GTATAC	1 cut(s)	4689
Bsu36I	CCTNAGG	1 cut(s)	1855
BsuI	GTATCC	3 cut(s)	1360, 5078, 7348
BtgI	CCRYGG	5 cut(s)	391, 584, 3762, 3842, 5326
BtsI	GCAGTG	3 cut(s)	2972, 5768, 6032
BveI	ACCTGC	3 cut(s)	4834, 7179, 7601
CaiI	CAGNNNCTG	3 cut(s)	1406, 2048, 6968
CciI	TCATGA	2 cut(s)	721, 4408
CfoI	GCGC	5 cut(s)	1089, 1290, 4406, 6405, 7596
CseI	GACGC	3 cut(s)	472, 4281, 7646
CspCI	CAANNNNNGTGG	4 cut(s)	2119, 2154, 3795, 3830
DraI	TTTAAA	6 cut(s)	178, 2928, 4071, 4764, 5646, 7471
DraIII	CACNNNGTG	3 cut(s)	57, 1979, 5276
EaeI	YGGCCR	1 cut(s)	5566
EciI	GGCGGA	3 cut(s)	1565, 6485, 7405
Ecl136II	GAGCTC	2 cut(s)	1525, 6662
Eco130I	CCWWGG	7 cut(s)	237, 3842, 4752, 5326, 6927, 7668, 7717
Eco147I	AGGCCT	3 cut(s)	2751, 7249, 7641
Eco24I	GRGCYC	4 cut(s)	188, 1527, 5508, 6664
Eco31I	GGTCTC	3 cut(s)	5444, 6195, 7871
Eco47I	GGWCC	7 cut(s)	234, 3796, 4094, 4349, 5175, 7013, 7686
Eco53kI	GAGCTC	2 cut(s)	1525, 6662
Eco57I	CTGAAG	8 cut(s)	1689, 2366, 3147, 3260, 4448, 5547, 6063, 7457
Eco72I	CACGTG	1 cut(s)	7406
Eco81I	CCTNAGG	1 cut(s)	1855
Eco88I	CYCGRG	1 cut(s)	3111
EcoICRI	GAGCTC	2 cut(s)	1525, 6662
EcoNI	CCTNNNNNAGG	3 cut(s)	791, 4194, 7759
EcoO109I	RGGNCCY	5 cut(s)	184, 185, 3796, 4732, 4942
EcoRI	GAATTC	1 cut(s)	1106
EcoRII	CCWGG	8 cut(s)	2133, 2565, 4728, 5746, 6934, 7244, 7287, 7555
EcoT14I	CCWWGG	7 cut(s)	237, 3842, 4752, 5326, 6927, 7668, 7717
EcoT22I	ATGCAT	2 cut(s)	3791, 4446
EcoT38I	GRGCYC	4 cut(s)	188, 1527, 5508, 6664
ErhI	CCWWGG	7 cut(s)	237, 3842, 4752, 5326, 6927, 7668, 7717
FaqI	GGGAC	7 cut(s)	1879, 3667, 3809, 5488, 6176, 6239, 6845
FauI	CCCGC	2 cut(s)	386, 4461
FauNDI	CATATG	5 cut(s)	1518, 1545, 2403, 3905, 4746
FbaI	TGATCA	1 cut(s)	7567
FblI	GTMKAC	2 cut(s)	3600, 4688
FriOI	GRGCYC	4 cut(s)	188, 1527, 5508, 6664
FspAI	RTGCGCAY	1 cut(s)	6404
FspI	TGCGCA	1 cut(s)	6404
GlaI	GCGC	5 cut(s)	1088, 1289, 4405, 6404, 7595
GsaI	CCCAGC	2 cut(s)	225, 1241
GsuI	CTGGAG	5 cut(s)	4095, 5276, 5769, 5865, 6219
HaeII	RGCGCY	2 cut(s)	4407, 7597
HapII	CCGG	7 cut(s)	621, 2662, 2870, 3519, 4518, 4672, 5581
HgaI	GACGC	3 cut(s)	472, 4281, 7646
HhaI	GCGC	5 cut(s)	1089, 1290, 4406, 6405, 7596
Hin1I	GRCGYC	1 cut(s)	464
Hin6I	GCGC	5 cut(s)	1087, 1288, 4404, 6403, 7594
HinP1I	GCGC	5 cut(s)	1087, 1288, 4404, 6403, 7594
HincII	GTYRAC	3 cut(s)	2949, 5410, 5982
HindII	GTYRAC	3 cut(s)	2949, 5410, 5982
HindIII	AAGCTT	7 cut(s)	2378, 2834, 3346, 3941, 4296, 5627, 6849
HpaI	GTTAAC	1 cut(s)	2949
HpaII	CCGG	7 cut(s)	621, 2662, 2870, 3519, 4518, 4672, 5581
Hpy99I	CGWCG	3 cut(s)	234, 2244, 7662
HpyCH4IV	ACGT	8 cut(s)	229, 2242, 3493, 3688, 5116, 5803, 6838, 7405
HpySE526I	ACGT	8 cut(s)	229, 2242, 3493, 3688, 5116, 5803, 6838, 7405
Hsp92I	GRCGYC	1 cut(s)	464
HspAI	GCGC	5 cut(s)	1087, 1288, 4404, 6403, 7594
KflI	GGGWCCC	1 cut(s)	3796
Kpn2I	TCCGGA	1 cut(s)	3518
KpnI	GGTACC	1 cut(s)	6942
Ksp22I	TGATCA	1 cut(s)	7567
KspAI	GTTAAC	1 cut(s)	2949
LguI	GCTCTTC	2 cut(s)	71, 3774
MaeII	ACGT	8 cut(s)	229, 2242, 3493, 3688, 5116, 5803, 6838, 7405
MfeI	CAATTG	3 cut(s)	1037, 1416, 5107
MmeI	TCCRAC	5 cut(s)	1382, 2521, 4871, 5756, 7886
Mph1103I	ATGCAT	2 cut(s)	3791, 4446
MroI	TCCGGA	1 cut(s)	3518
MroXI	GAANNNNTTC	9 cut(s)	2619, 3273, 3668, 6081, 7039, 7712, 7814, 7831, 7857
MslI	CAYNNNNRTG	5 cut(s)	3594, 4308, 4893, 5871, 6616
MspI	CCGG	7 cut(s)	621, 2662, 2870, 3519, 4518, 4672, 5581
MunI	CAATTG	3 cut(s)	1037, 1416, 5107
Mva1269I	GAATGC	3 cut(s)	2230, 2596, 7458
MvaI	CCWGG	8 cut(s)	2135, 2567, 4730, 5748, 6936, 7246, 7289, 7557
MvnI	CGCG	2 cut(s)	1087, 4287
NciI	CCSGG	2 cut(s)	4673, 5581
NcoI	CCATGG	2 cut(s)	3842, 5326
NdeI	CATATG	5 cut(s)	1518, 1545, 2403, 3905, 4746
NmeAIII	GCCGAG	4 cut(s)	1849, 1856, 3727, 6490
NsbI	TGCGCA	1 cut(s)	6404
NsiI	ATGCAT	2 cut(s)	3791, 4446
OliI	CACNNNNGTG	1 cut(s)	5871
PaeI	GCATGC	1 cut(s)	6442
PaeR7I	CTCGAG	1 cut(s)	3111
PagI	TCATGA	2 cut(s)	721, 4408
PaqCI	CACCTGC	1 cut(s)	7601
PceI	AGGCCT	3 cut(s)	2751, 7249, 7641
PciI	ACATGT	5 cut(s)	1388, 1474, 5844, 6867, 7956
PciSI	GCTCTTC	2 cut(s)	71, 3774
PcsI	WCGNNNNNNNCGW	1 cut(s)	4486
PctI	GAATGC	3 cut(s)	2230, 2596, 7458
PdmI	GAANNNNTTC	9 cut(s)	2619, 3273, 3668, 6081, 7039, 7712, 7814, 7831, 7857
PflMI	CCANNNNNTGG	2 cut(s)	6671, 7604
PfoI	TCCNGGA	1 cut(s)	5746
PmaCI	CACGTG	1 cut(s)	7406
PmlI	CACGTG	1 cut(s)	7406
Ppu21I	YACGTR	2 cut(s)	3494, 7406
PpuMI	RGGWCCY	1 cut(s)	3796
PscI	ACATGT	5 cut(s)	1388, 1474, 5844, 6867, 7956
PsiI	TTATAA	4 cut(s)	1994, 3195, 3392, 4437
Psp124BI	GAGCTC	2 cut(s)	1527, 6664
Psp5II	RGGWCCY	1 cut(s)	3796
Psp6I	CCWGG	8 cut(s)	2133, 2565, 4728, 5746, 6934, 7244, 7287, 7555
PspCI	CACGTG	1 cut(s)	7406
PspFI	CCCAGC	2 cut(s)	221, 1237
PspGI	CCWGG	8 cut(s)	2133, 2565, 4728, 5746, 6934, 7244, 7287, 7555
PspOMI	GGGCCC	1 cut(s)	184
PspPPI	RGGWCCY	1 cut(s)	3796
PsrI	GAACNNNNNNTAC	6 cut(s)	2054, 2086, 4827, 4859, 7083, 7115
PstI	CTGCAG	3 cut(s)	5344, 5407, 6964
PstNI	CAGNNNCTG	3 cut(s)	1406, 2048, 6968
RseI	CAYNNNNRTG	5 cut(s)	3594, 4308, 4893, 5871, 6616
SacI	GAGCTC	2 cut(s)	1527, 6664
SapI	GCTCTTC	2 cut(s)	71, 3774
ScaI	AGTACT	2 cut(s)	2072, 2607
SfcI	CTRYAG	5 cut(s)	548, 852, 5340, 5403, 6960
Sfr274I	CTCGAG	1 cut(s)	3111
SinI	GGWCC	7 cut(s)	234, 3796, 4094, 4349, 5175, 7013, 7686
SlaI	CTCGAG	1 cut(s)	3111
SmiI	ATTTAAAT	1 cut(s)	5646
SmiMI	CAYNNNNRTG	5 cut(s)	3594, 4308, 4893, 5871, 6616
SmlI	CTYRAG	9 cut(s)	1013, 3111, 3582, 4033, 5000, 6125, 6716, 7340, 7589
SmoI	CTYRAG	9 cut(s)	1013, 3111, 3582, 4033, 5000, 6125, 6716, 7340, 7589
SpeI	ACTAGT	2 cut(s)	2855, 4781
SphI	GCATGC	1 cut(s)	6442
SseBI	AGGCCT	3 cut(s)	2751, 7249, 7641
SspI	AATATT	6 cut(s)	418, 1375, 2580, 3457, 3913, 5152
SstI	GAGCTC	2 cut(s)	1527, 6664
StuI	AGGCCT	3 cut(s)	2751, 7249, 7641
StyI	CCWWGG	7 cut(s)	237, 3842, 4752, 5326, 6927, 7668, 7717
SwaI	ATTTAAAT	1 cut(s)	5646
TaiI	ACGT	8 cut(s)	232, 2245, 3496, 3691, 5119, 5806, 6841, 7408
TaqI	TCGA	9 cut(s)	370, 1301, 1847, 1984, 2350, 3112, 4667, 6498, 7252
TaqII	GACCGA	2 cut(s)	222, 6516
TauI	GCSGC	3 cut(s)	8, 3820, 7804
TspGWI	ACGGA	5 cut(s)	2956, 3921, 5358, 5368, 7808
Van91I	CCANNNNNTGG	2 cut(s)	6671, 7604
VneI	GTGCAC	3 cut(s)	2366, 3623, 4707
VpaK11BI	GGWCC	7 cut(s)	234, 3796, 4094, 4349, 5175, 7013, 7686
XagI	CCTNNNNNAGG	3 cut(s)	791, 4194, 7759
XbaI	TCTAGA	2 cut(s)	1636, 7319
XcmI	CCANNNNNNNNNTGG	6 cut(s)	283, 448, 2727, 2979, 3989, 5673
XhoI	CTCGAG	1 cut(s)	3111
XmiI	GTMKAC	2 cut(s)	3600, 4688
XmnI	GAANNNNTTC	9 cut(s)	2619, 3273, 3668, 6081, 7039, 7712, 7814, 7831, 7857
ZrmI	AGTACT	2 cut(s)	2072, 2607
Zsp2I	ATGCAT	2 cut(s)	3791, 4446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.