Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0006211

Physical Location & Seq

Genomic Coordinates Reverse (-)

11529652 .. 11552473

Gene Structure 22822 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001185

Sequence Viewer

CDS Protein Promoter (2k)

Length: 7986 bp

ATGGCGGCTTCGCCCGTCAAGTTCCTCTTCGGTTTCTTGATCCTCTGCATCACATTGTGGCTGCTCTTCATATTTGCTTCAAGGTTTATAGCTTGGATTTTAAGCCGCGTATTAGGAGCATCTGTCAAATTTCGGGTCGCTGGATGGGTATTTGTCAGGGATGTCATGGTGAAGTTTAAAAAGGGCCCTGTTGAATCTATTTCCATTGGGGAAATTAAACCCAGCATACGTCGGTCCTTGGTCAAACTAGGGGTTGGTTTTATTTCTAAAGATCCCAAGTTGCAAGTGGTAATATCTGACTTGGAAGTTGTAATGAGGTCTTCAAATAAGAGTACGCCAAAGCCAAAGGCAAAGGCAAAGGCCAAGTCTGGATCTCGAAAATCCCGCAATTCAGGCCGTGGAAAGTGGATGGTAGGGGCCAATATTGCACGATATTTATCTGTTTCCGTCACAGACTTGGTTTTGAAGACGCCAAAAATTTCCATCGAAGTAAAGGAATTGAAAGTGGACATATCTAAAGATGGTACATCCAAGCAAAATCTTATTGTCAAGCTACAGATATTACCTATTGTTGTTCAAGGGAATGAACCACGGGCCAGTTGTGACCAGTCATCCAGTTTTTGCACCGGAGAATCCCTTTCTGTAGGCCAGTCATCATCTGCTTTGGTGGACAGGTCATCTACTCTTTTTGTCTGTGAAGAATTTTCGCTCTCGTGTGAATTTGGTCATGATAGGGAAGTTGGTGTAATCTTCAAGAATGTGGATATTTCTAGTGGAGAGGTCAATGTGAACCTGAACGAGGAGCTACTTTCAAAAAGCAAAAGCTCATCAAACACTTCATCTGACCCTGATAAAGCTATAGAATCCTCCACTGATTCTATTGCTTCTAAGAAGGCACAAAAAAAGCAACAAATGAGTGATGCGATCTCAAAATGCACCACTTTATTTCCTGAAAAGGTTTCCTTCAATTTGCCAAGACTGGATGTGAGATTTGAGCATCGGGAACATGATTTTGCTCTTGAGAATAACATCATGGGCATCCAATTGAAAAGCATCAAATCACAATCTAGTGAAGATGTGGGAGAAAGCACGCGCCTTGATGTTCAATTAGAATTCAGCGAGATTCATCTGCTTAGAGAAGCTGGCACTTCCGTTTTGGAGATACTGAAACTTGATGTTATCTCATTTTTGTACATTCCAATACAGCCAATCTCTCCTATTAGAGCTGAAATTGATGTAAAGCTGGGTGGTACTCAATGCAACCTTATAATGAACAGATTAAAGCCATTGTTGCGCCTCCACTTCTCGAAAAAGAAAAGAATGGTACTTCGGGAGGAAAAGCCTACTCTTGACAAGACATCTCCAACAACGGATACCAATATTATCATGTGGACATGTACTTTTTCAGCCCCTGAGATGACAATTGTGCTTCATAGCCTCAGTGGTTTGCCACTTTATCATGTCTGCTCACAATCATCTCATGTATTTGCAAATAACATATCAAATACTGGAACTACTGTACATATGGAGCTCGGTGAACTTAATTTGCATATGGCAGATGAATACCAACAATGCTTGAAAGAAAACCTTTTTGGTGTGGAATCAAATTCAGGTTCCATAGTCAATGTTGCAAAGGTTAGTCTAGACTGGGGCAAAAAGGACATGGAATCATCTGAAGAAGGTGCTTCTAAAAGTAAATTAGTTTTATCTGTTGATGTGACTGGTATGGCTGTTTATTTTACTTTCAAGCGTGTTGAGTCGTTTATATCAACTGCCATGTCATTTCAAGCACTTTTTAAGAATTTGTCGTCTTCTGAAAAAAGAACATCACAAAGCCGAGGACGGCAATCATCGAAATCCTCAGGAAAAGGGACTCGGCTATTGAAATTAAATCTTGAACGGTGTTCTTTGAATTTCTGTGGTGAGGTGGGTTTAGGAAAAATGGTTGTTCCAGATCCTAAGCGTGTAAATTATGGGTCACAAGGTGGTCGAATTGTTATAAATGAGTCGGCTGATGGCACTCCACGGGTTGCAGAAGTAATTTCCACAGTATCTGATGATTGTAAGAACTTAAAGTACTCCATTTCTCTTGACATCTTCCATTTCAGCTTATGTGTGAACAAGGAAAAACAATCCACCCAGGTTGAACTTGAAAGAGCCAGATCTATCTATCAGGACTACTTGGAGGAACATAAGCCCGAACCAAAATTGGTACTGTTTGATATGCAGAATGCTAAATTTGTACGACGTTCTGGTGGTCTTAAAGAGATTGCTGTCTGCTCTCTTTTCAGTGCTACTGATATTACGATTAGATGGGAGCCTGATGTACATTTATCACTAATTGAACTTGGACTTCGATTGAAGTTACTGGTGCACAATCAGAAGCTTCAGGTACATGGTAAAGAACATATGGAAAATGTATCTAGCATGAGCAACGCTGAACAGAAAAAAGAAGCCATTACAGAACCAGTAAATTTAGACAAGCAAAAGAAAAGGGAATCTATCATTGCTGTTGATGTGGAAATGCTGAATGTTTATGCTGAGGTTGGAGATGGAGTTGATGCAGTAGTCCAGGTACAGTCAATATTCTCTGAGAATGCTCGCATAGGAGTACTTCTGGAAGGATTTCTGCTTTGTTTCAATGGGTGCAGAATACTCAAAAGTAGCCGGATGCAAATTTCACGTATTCCTAGTGCCTCTTGTGCCCCTGATGCAAAAATACCTCCATCTACCACATGGGATTGGGTAATTCAAGGCCTTGATGTTCATATTTGCTTACCATACAGGTTAGAATTGCGGGCCATTGATGATTCTGTTGAAGAGATGCTGCGTGCTCTAAAGCTTGTAGCTGCTGCTAAAACTAGTCTTATCTTTCCAGTGAAGAAAGATCTTTCAAAAGCTAAGAAGCCCAGTTCAGTAAAATTTGGGTGTTTAAAGTTTTTAATACGGAGGTTAACTTTTGATATTGAAGAAGAACCACTGCAAGGCTGGCTTGATGAACACTATCACTTAATGAAGAATGAGGCATCTGAGTTAGCTGTTAGGTTGAAGTTGCTTGATGAATTTATTTCCAAAGTCAGCCAGTCTCCCAAACCCACTGAAACAAATGATTCTACTCGAGAAAGAAAGACTTTCTTTAATGGAGTTGAGATTGACGTACAAGATCCTTCAGCAGTTAGTAAGATGCAAGAAGAAATTTATAAACAATCATTCAGATCTTATTACAAGGCATGTCAGAATCTAGCACGATCAGAGGGTTCAGGTGCCTGTAGGGAAGGGCTTCAGGCTGGTTTTAAGCCTAGTACATCCAGAACTTCTCTTCTTTCTATATCAGCAACAGATTTAGATGTAAGCTTGACATTGATTGATGGTGGTGATGATGGGATGATAGATGTTATAAAGATGCTGGATCCTGTCTGTCGTGAAAATAATATACCATTTTCTAAACTTTATGGGGGTAATATTCTCCTGCACACAGGCTCACTTGTGGTTCAGCTACGTGACTTTACATTTCCTCTCTTGTCCGGATCTTCTGGTAAATGTGAAGGTCGCCTTGTGCTAGGACAGCAGGCAACAAGTTTTCAGCCTCAAGTACACAAAGATGTCTACATTGGGAAATGGAGAAAGGTGCACTTGCTTCGTTCTGCTACTGGTACAACTCCACCTATGAAAACATTCACAGATTTGTCCCTACGTTTTCAGAAAGCCGAGGTGTCCTTTGGAGTGGGATATGAACCACCTTTCGCTGATGTGAGTTATGCGTTTACTGTGGCTCTTCGCAGGGCTAATCTATGCATTAGGGACCCTAATCCACAACCCTTGCCACCAAAGAAGGAAAAGAGCTTGCCATGGTGGGATGATATGAGAAACTACATTCATGGAAACATCAAGATTCTCTTTTCTGAAACCATATGGAATATTCTTGCGACTACTGATCCGCATGAAAAGCTTGACAAACTTCAAGTAACAGCTAGTCCTATGGAGATCCAGCAGTCAGATGGTCGTATTCATGTTTCTGCGAATGATTTTAAGGTTTTCTCAAGCAGTTTGGACACTCTGGCAAATAATCGTGGTTTAAAACTTCCTAAAGGTATATCTGGTCCTGTAATAGAAGCTCCAGCATTAACTGTTGAAGTTACAATGGATTGGGAATGTGAGTCTGGAAATCCTATGGATCATTATTTATTTGCTCCTCCTATTGAAGGGAAACCTCGTGAAAAGGTGTTTGATCCATTCAGATCCACCTCTCTGTCCCTTCGCTGGAATATCTTGCTTAGACGCTCTCCCTTACGTGAGAAACAAGCTCCACATTCTAATGCGGTAGATGGTGTAGATGTAGATGGAACTGTTTACGGTCCTCCTCACAAGGAAGAGAATGTTTCCAGTCTTCCACCAACAGTGAATGTTGGCGCTCATGATCTAGCATGGATTCTGAAGTTTTATAACATGCATTATCTTCCTCCTCACAAATTGCGGGCCTTTGCTCGTTTTCCTCGTTTTGGAGTTCCAAGAATCCCTAGATCTGGTAACTTGTCCTTGGACAGAGTGATGACAGAATTTATGCTTCGCGTTGATGCTTCGCCTACTTGTATAAAGCATGTACCTTTAGATGATGACGATCCAGCTAAAGGACTGACATTCTTTATGACAAAGTTGAAATTGGAAATGTGTTCGAGCCGGGGTAAGCAAAAGTATACTTTTGATTGCAAGCGTGCACCTCTTGATCTTGTTTACCAGGGCCTTGACCTTCATATGCCCAAGGCATTTTTAAACAGAGAAGAAAGCACTAGCGTTGCAAAAGTAGTTCAAATGATGATAAAAAACTCACAACCTGCATCAGTAGATAGAGTTCCAACTGAAAAGAGTAGCAACATGAGTAGTGGCACAGAGAAGCATCGTGATGATGGATTTCTATTGTCATCAGAGTATTTCACGATCAGAAGGCAGGCCCCGAAGGCTGATCCTGTTAGTTTATTAGCTTGGCAAGAGGCTGGAAGAAAAAATCTTGAGATGACTTATGTGAGGTCTGAATTTGAAAATGGAAGTGAGAGTGACGAGCATACCCGATCTGATCCAAGTGACGATGATGGATACAATGTGGTAATAGCTGACAATTGCCAACGTATATTTGTCTATGGACTCAAACTTCTGTGGAATATTGAGAATAGAGATGCTGTTTGGTCCTTTGTTGGTGGTCTATCCAAAGCATTTCAAGCCCCCAAACCTTCCCCCTCTAGGCAGTATGCACAAAAGAAATTACTTGAGCAGCAGCAGTCACATAGTGGTGGTGAAATGCAGCAAGATGGTAGCTCTAAGCCCACCACTACCAGCCATGGTGTTGCTCCTGCAGAGGTATCTGGTTCACTGTCATCCCCGTCACCTTCCGTCAAATCGGAGATCTCGTCATCTGCAGTTGACAACTCTTCATCTGGTGTAGTAGAAAAGCATAGAGAGACCAAAGATGCAGAGGAGGACGGGACTCGTCATTTCATGGTGAATGTTATTGAGCCCCAATTCAATCTTCATTCTGAAGATGCCAATGGAAGGTTTTTGCTTGCTGCTGTTAGTGGCCGTGTTTTGGCCCGGTCATTTCATTCAGTTCTTCATGTTGGCTATGAGATGATTGAGAAGCTTCGTAATGATAATTTAAATATACCAGAATGTGAACCGGAAATGACATGGAAACGCATGGAGTTTTCTGTAATGTTAGAGCATGTTCAAGCTCATGTTGCTCCAACAGATGTTGATCCTGGAGCTGGATTGCAGTGGCTTCCAAAAATTCGTAGAAGCTCTCCAAAAGTAAAACGTACTGGTGCTTTACTTGAAAGGGTATTTATGCCCTGTGACATGTACTTTCGCTACACAAGGCACAAAGGTGGAACTCCAGAGTTGAAGGTGAAGCCCTTAAAAGAGCTGACTTTCAATTCCCATAATATCACGGCAACAATGACCTCTCGCCAATTTCAAGTTATGCTAGATGTGTTGACAAATCTTCTTTTTGCACGACTTCCCAAGCCTAGAAAAAGTAGTCTGTCACTGCCTGCTGAAGATGATGAAGATGTGGAGGAGGAGTCAGACGAAGTGGTTCCTGATGGTGTTGAAGAGGTGGAGCTTGCAAGAATAGAACTTGAGAAAAAGGAACGGGAGCAGAGATTGATTCTTGGGGACATAAGAAAGTTATCCCTTCACTGTGATACCACTGGAGACCTATATCCAGAAAAGGAAGGGGACTTGTGGATGATAAGCTGTACAAGATCTACTCTGGTGCAAGGACTAAAGAGAGAGCTGGTTAATTCAAAAAAATCTAGGAAAGCTGCGTATGCTTCATTAAGAATGGCTCTACATAAGGCTGCTCAGCTACGGCTAATGGAAAAGGAGAAAAACAAAAGTCCATCCTATGCTATGCGCATTTCTTTGCAAATTAACAAAGTGGTTTGGAGCATGCTTGTTGATGGTAAATCTTTTGCCGAGGCTGAGATCAATGACATGATTTATGACTTCGACCGAGATTACAAGGATGTTGGTGTTGCTCAGTTTACAACAAAAAATTTTGTTGTTAGAAACTGCCTCCCAAATGCCAAATCAGATATGCTTTTATCAGCATGGAATCCTCCACCTGAATGGGGAAAAAAAGTTATGCTTCGTGTGGATGCAAAGCAGGGAGCTCCAAAGGATGGAAGTTCTCCTCTGGAACTTTTTGAGGTAGAGATTTATCCTCTCAAGATCCATTTAACAGAAACAATGTACAGAATGATGTGGGGATATTTATTCCCAGAAGAAGAACAGGATTCACAAAGACGGCAGGAAGTTTGGAAGATCTCAACAACTACTGGTACAAAACGTGGAAAGAAAGCTTCTTTAGTCCCTGACATGTCTGCATTTAGCAGTCAAACAATGAAGGAGTCTGAGGGGTCATCCAAATCAAGTGCCTTGGCCCCTGGTACCAGTCAATCCCCTGTTCCTGCAGATTCTGTACAAGAATCAAAATTGCAAAGTAAAGCACTCATTGCGAGTGGTCCAAATCCTGAGTTAAGAAGAACATCTTCCTTTGACAGATCATGGGAAGAGACTGTTGCAGAATCAGTTGCTACTGAACTTGTCCTACAGAGCATTAGTGGGCCTCTTGGGTCTATTGAACAAGATGAATCCTCTAAGAATAAATTGAAAGATCCCAAAGCTATCAAATCTGGCAGATCATCCCATGAAGAAAAGAAGGTACAAAAGTCACAAGAAGAGAAAAAATCTGCCAGGCCTCGAAAGATGATGGAGTTTCACAATATCAAGATAAGCCAGGTTGAGCTATGTGTTACCTATGAAGGATCTAGATTTGTGGTAAATGATCTCAAGTTGCTGATGGATACATTTCACCGTGTTGAGTTTACTGGTACTTGGCGGAGACTTTTTTCACGTGTTAAGAAGCACATCATTTGGGGAGTCCTGAAGTCTGTAACTGGAATGCAGGGTAAGAAGTTTAAAGACAAGGCTAACAGTCAGAGAGAACCCAGTGGATCCGGGGTTCCCGATAGTGAGCTTAATTTCAGCGACAATGAAGGCCAGCCAGGACAATCTGATCAATATCCAATAACCTTTCTCAAGCGCCCTACTGATGGAGCAGGTGATGGATTTGTCACATCCATCAGAGGCCTTTTCAATACTCAGCGTCGTAAGGCCAAGGCATTCGTGCTGCGGACCATGAGGGGTGAAGCTGAGAATGATTTCCAAGGAGATTGGAGTGAAAGTGATGCAGAGTTTTCTCCATTTGCTAGGCAGCTCACTATAACAAAAGCTAAGAGGCTTATCAGGCGGCACACGAAGAAATTCCGTTCAAGAAAAGGTTCGTCTTCACAACAGAGAGAATCTCTTCCAACATCACCGAGGGAGACCACTCCTTTAGAAAGTGATTCTTCTGGTGGATCCTCACCCTTTGAGGATTTTAACGAGGGATTTAATGAGGGCAACATGTTGGTTTCCAAAGAGGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0005575 GO:0005623 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0009267 GO:0009605 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009888 GO:0009932 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010015 GO:0010053 GO:0010054 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0016036 GO:0016043 GO:0016049 GO:0021700 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030154 GO:0030307 GO:0030427 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0032989 GO:0033554 GO:0035618 GO:0035619 GO:0035838 GO:0040007 GO:0040008 GO:0042594 GO:0042995 GO:0044463 GO:0044464 GO:0044706 GO:0045927 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051286 GO:0051704 GO:0051716 GO:0060560 GO:0065007 GO:0070297 GO:0070298 GO:0071496 GO:0071695 GO:0071840 GO:0080147 GO:0090404 GO:0090406 GO:0090558 GO:0090627 GO:0099402 GO:0120025 GO:0120038 GO:1902531 GO:1902532 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Apt1 Fmp27_GFWDK

Protein Analysis

2662

Amino Acids

297.95

Weight (kDa)

8.76

Isoelectric Point (pI)

51.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hobbit	PF10344	4 - 2578	0.0	Hobbit/FMP27/BTLP2 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58250 AT1G58250 AT5G49680
fragaria_vesca	FvH4_5g34390
malus_domestica	MD08G1201600.v1.1 MD08G1201800.v1.1 MD08G1202400.v1.1 MD08G1208300.v1.1 MD15G1388100.v1.1
prunus_persica	Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1 Prupe.1G535700_v2.0.a1
pyrus_communis	pycom15g34840
rosa_chinensis	RchiOBHm_Chr7g0235041
rosa_laevigata	RLG00000001185
rosa_multiflora	Rmu_co8243721.1_g000001 Rmu_sc0002239.1_g000001 Rmu_sc0013687.1_g000001 Rmu_sc0015410.1_g000007
rosa_roxburghii	Rroxscaffold_3G00226360
rosa_rugosa	Rorug07G0287300
rosa_samantha	Rh7AG442100 Rh7BG414600 Rh7CG463100 Rh7DG431700
rosa_wichuraiana	Rw7G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	5 cut(s)	1268, 2000, 3201, 3398, 4443
AarI	CACCTGC	1 cut(s)	7604
Acc16I	TGCGCA	1 cut(s)	6407
Acc36I	ACCTGC	2 cut(s)	4840, 7604
Acc65I	GGTACC	1 cut(s)	6941
AccB1I	GGYRCC	2 cut(s)	3263, 6941
AccB7I	CCANNNNNTGG	1 cut(s)	6674
AccI	GTMKAC	2 cut(s)	3606, 4694
AccII	CGCG	3 cut(s)	108, 1093, 4569
AccIII	TCCGGA	1 cut(s)	3524
AcoI	YGGCCR	1 cut(s)	5569
AcuI	CTGAAG	8 cut(s)	1695, 2372, 3153, 3266, 4454, 5550, 6066, 7460
AcvI	CACGTG	1 cut(s)	7409
AcyI	GRCGYC	1 cut(s)	470
AdeI	CACNNNGTG	3 cut(s)	57, 1985, 5282
AflIII	ACRYGT	5 cut(s)	1394, 5847, 6870, 7408, 7959
AhlI	ACTAGT	1 cut(s)	2861
AjnI	CCWGG	8 cut(s)	2139, 2571, 4734, 5749, 6937, 7247, 7290, 7558
AjuI	GAANNNNNNNTTGG	4 cut(s)	1575, 1607, 5505, 5537
AleI	CACNNNNGTG	1 cut(s)	5874
AloI	GAACNNNNNNTCC	2 cut(s)	7500, 7532
Alw21I	GWGCWC	6 cut(s)	1533, 2376, 2836, 3633, 4717, 6667
Alw26I	GTCTC	6 cut(s)	3090, 5447, 6198, 7061, 7390, 7874
Alw44I	GTGCAC	3 cut(s)	2372, 3629, 4713
AlwNI	CAGNNNCTG	3 cut(s)	1412, 2054, 6971
Ama87I	CYCGRG	1 cut(s)	3117
Aor13HI	TCCGGA	1 cut(s)	3524
ApaI	GGGCCC	1 cut(s)	188
ApaLI	GTGCAC	3 cut(s)	2372, 3629, 4713
ArsI	GACNNNNNNTTYG	4 cut(s)	120, 152, 350, 382
Asp700I	GAANNNNTTC	9 cut(s)	2625, 3279, 3674, 6084, 7042, 7715, 7817, 7834, 7860
Asp718I	GGTACC	1 cut(s)	6941
AspLEI	GCGC	5 cut(s)	1095, 1296, 4412, 6408, 7599
AsuC2I	CCSGG	3 cut(s)	4679, 5584, 7513
AvaI	CYCGRG	1 cut(s)	3117
AvaII	GGWCC	7 cut(s)	234, 3802, 4100, 4355, 5181, 7016, 7689
AxyI	CCTNAGG	1 cut(s)	1861
BaeGI	GKGCMC	5 cut(s)	188, 2376, 2707, 3633, 4717
BaeI	ACNNNNGTAYC	2 cut(s)	7208, 7241
BamHI	GGATCC	3 cut(s)	3409, 7508, 7913
BanI	GGYRCC	2 cut(s)	3263, 6941
BanII	GRGCYC	4 cut(s)	188, 1533, 5511, 6667
BauI	CACGAG	2 cut(s)	712, 4212
BbrPI	CACGTG	1 cut(s)	7409
BbsI	GAAGAC	5 cut(s)	312, 473, 1803, 4379, 7833
Bbv12I	GWGCWC	6 cut(s)	1533, 2376, 2836, 3633, 4717, 6667
BbvCI	CCTCAGC	1 cut(s)	2541
BceAI	ACGGC	6 cut(s)	381, 1859, 5556, 5955, 6377, 6815
BcgI	CGANNNNNNTGC	2 cut(s)	3620, 3654
BciT130I	CCWGG	8 cut(s)	2141, 2573, 4736, 5751, 6939, 7249, 7292, 7560
BciVI	GTATCC	3 cut(s)	1366, 5084, 7351
BclI	TGATCA	1 cut(s)	7570
BcnI	CCSGG	3 cut(s)	4679, 5584, 7513
BcoDI	GTCTC	6 cut(s)	3090, 5447, 6198, 7061, 7390, 7874
BcuI	ACTAGT	1 cut(s)	2861
BfmI	CTRYAG	8 cut(s)	554, 642, 858, 3268, 5346, 5409, 6963, 7103
BfoI	RGCGCY	2 cut(s)	4413, 7600
BfuAI	ACCTGC	2 cut(s)	4840, 7604
BfuI	GTATCC	3 cut(s)	1366, 5084, 7351
BglI	GCCNNNNNGGC	1 cut(s)	4955
BglII	AGATCT	7 cut(s)	2162, 2887, 3215, 4520, 5397, 6254, 6816
BlpI	GCTNAGC	1 cut(s)	6354
BmcAI	AGTACT	2 cut(s)	2078, 2613
Bme18I	GGWCC	7 cut(s)	234, 3802, 4100, 4355, 5181, 7016, 7689
BmeT110I	CYCGRG	1 cut(s)	3117
BmrI	ACTGGG	3 cut(s)	1657, 2904, 7497
BmuI	ACTGGG	3 cut(s)	1657, 2904, 7497
BpiI	GAAGAC	5 cut(s)	312, 473, 1803, 4379, 7833
BplI	GAGNNNNNCTC	2 cut(s)	7843, 7875
BpmI	CTGGAG	4 cut(s)	4101, 5772, 5868, 6222
Bpu10I	CCTNAGC	2 cut(s)	1959, 2541
Bpu1102I	GCTNAGC	1 cut(s)	6354
BpuEI	CTTGAG	9 cut(s)	1040, 3573, 4024, 5027, 5282, 6149, 6704, 7328, 7577
BpuMI	CCSGG	3 cut(s)	4679, 5584, 7513
BsaAI	YACGTR	4 cut(s)	2684, 3500, 4292, 7409
BsaBI	GATNNNNATC	4 cut(s)	436, 4617, 5745, 7575
BsaHI	GRCGYC	1 cut(s)	470
BsaI	GGTCTC	3 cut(s)	5447, 6198, 7874
BsaWI	WCCGGW	3 cut(s)	626, 3524, 5668
Bse21I	CCTNAGG	1 cut(s)	1861
Bse3DI	GCAATG	2 cut(s)	2505, 7005
Bse8I	GATNNNNATC	4 cut(s)	436, 4617, 5745, 7575
BseAI	TCCGGA	1 cut(s)	3524
BseBI	CCWGG	8 cut(s)	2141, 2573, 4736, 5751, 6939, 7249, 7292, 7560
BseJI	GATNNNNATC	4 cut(s)	436, 4617, 5745, 7575
BseMI	GCAATG	2 cut(s)	2505, 7005
BseRI	GAGGAG	8 cut(s)	815, 4182, 4350, 4452, 5483, 6080, 6083, 6675
BseSI	GKGCMC	5 cut(s)	188, 2376, 2707, 3633, 4717
BseYI	CCCAGC	2 cut(s)	221, 1243
BsgI	GTGCAG	2 cut(s)	2668, 3455
Bsh1236I	CGCG	3 cut(s)	108, 1093, 4569
Bsh1285I	CGRYCG	1 cut(s)	6505
BshNI	GGYRCC	2 cut(s)	3263, 6941
BsiEI	CGRYCG	1 cut(s)	6505
BsiHKAI	GWGCWC	6 cut(s)	1533, 2376, 2836, 3633, 4717, 6667
BsiHKCI	CYCGRG	1 cut(s)	3117
BsiSI	CCGG	7 cut(s)	627, 2668, 3525, 4678, 5584, 5669, 7512
BslFI	GGGAC	8 cut(s)	1885, 3673, 3815, 4237, 5491, 6179, 6242, 6848
BsmAI	GTCTC	6 cut(s)	3090, 5447, 6198, 7061, 7390, 7874
BsmFI	GGGAC	8 cut(s)	1885, 3673, 3815, 4237, 5491, 6179, 6242, 6848
BsmI	GAATGC	4 cut(s)	2236, 2602, 7461, 7676
Bso31I	GGTCTC	3 cut(s)	5447, 6198, 7874
BsoBI	CYCGRG	1 cut(s)	3117
Bsp120I	GGGCCC	1 cut(s)	184
Bsp1286I	GDGCHC	9 cut(s)	188, 1533, 2376, 2707, 2836, 3633, 4717, 5511, 6667
Bsp13I	TCCGGA	1 cut(s)	3524
Bsp1407I	TGTACA	6 cut(s)	1191, 1519, 2326, 6248, 6744, 6973
Bsp1720I	GCTNAGC	1 cut(s)	6354
Bsp19I	CCATGG	2 cut(s)	3848, 5332
BspEI	TCCGGA	1 cut(s)	3524
BspFNI	CGCG	3 cut(s)	108, 1093, 4569
BspHI	TCATGA	2 cut(s)	727, 4414
BspMAI	CTGCAG	3 cut(s)	5350, 5413, 6967
BspMI	ACCTGC	2 cut(s)	4840, 7604
BspQI	GCTCTTC	2 cut(s)	71, 3780
BspT107I	GGYRCC	2 cut(s)	3263, 6941
BspTNI	GGTCTC	3 cut(s)	5447, 6198, 7874
BsrDI	GCAATG	2 cut(s)	2505, 7005
BsrGI	TGTACA	6 cut(s)	1191, 1519, 2326, 6248, 6744, 6973
BssNAI	GTATAC	1 cut(s)	4695
BssNI	GRCGYC	1 cut(s)	470
BssSI	CACGAG	2 cut(s)	712, 4212
BssT1I	CCWWGG	8 cut(s)	237, 3848, 4536, 4758, 5332, 6930, 7671, 7720
Bst1107I	GTATAC	1 cut(s)	4695
Bst2BI	CACGAG	2 cut(s)	712, 4212
Bst2UI	CCWGG	8 cut(s)	2141, 2573, 4736, 5751, 6939, 7249, 7292, 7560
BstACI	GRCGYC	1 cut(s)	470
BstAPI	GCANNNNNTGC	1 cut(s)	7007
BstAUI	TGTACA	6 cut(s)	1191, 1519, 2326, 6248, 6744, 6973
BstBAI	YACGTR	4 cut(s)	2684, 3500, 4292, 7409
BstDSI	CCRYGG	5 cut(s)	397, 590, 2024, 3848, 5332
BstENI	CCTNNNNNAGG	2 cut(s)	797, 4200
BstFNI	CGCG	3 cut(s)	108, 1093, 4569
BstH2I	RGCGCY	2 cut(s)	4413, 7600
BstHHI	GCGC	5 cut(s)	1095, 1296, 4412, 6408, 7599
BstMAI	GTCTC	6 cut(s)	3090, 5447, 6198, 7061, 7390, 7874
BstMCI	CGRYCG	1 cut(s)	6505
BstNI	CCWGG	8 cut(s)	2141, 2573, 4736, 5751, 6939, 7249, 7292, 7560
BstNSI	RCATGY	9 cut(s)	1398, 3234, 4450, 4601, 5717, 5851, 6445, 6874, 7963
BstSFI	CTRYAG	8 cut(s)	554, 642, 858, 3268, 5346, 5409, 6963, 7103
BstSLI	GKGCMC	5 cut(s)	188, 2376, 2707, 3633, 4717
BstUI	CGCG	3 cut(s)	108, 1093, 4569
BstV2I	GAAGAC	5 cut(s)	312, 473, 1803, 4379, 7833
BstXI	CCANNNNNNTGG	1 cut(s)	6621
BstZ17I	GTATAC	1 cut(s)	4695
Bsu36I	CCTNAGG	1 cut(s)	1861
BsuI	GTATCC	3 cut(s)	1366, 5084, 7351
BtgI	CCRYGG	5 cut(s)	397, 590, 2024, 3848, 5332
BtsI	GCAGTG	3 cut(s)	2978, 5771, 6035
BveI	ACCTGC	2 cut(s)	4840, 7604
CaiI	CAGNNNCTG	3 cut(s)	1412, 2054, 6971
CciI	TCATGA	2 cut(s)	727, 4414
CfoI	GCGC	5 cut(s)	1095, 1296, 4412, 6408, 7599
CseI	GACGC	3 cut(s)	478, 4287, 7649
CspCI	CAANNNNNGTGG	4 cut(s)	2125, 2160, 3801, 3836
DraI	TTTAAA	6 cut(s)	178, 2934, 4077, 4770, 5649, 7474
DraIII	CACNNNGTG	3 cut(s)	57, 1985, 5282
EaeI	YGGCCR	1 cut(s)	5569
EciI	GGCGGA	1 cut(s)	7408
Ecl136II	GAGCTC	2 cut(s)	1531, 6665
Eco130I	CCWWGG	8 cut(s)	237, 3848, 4536, 4758, 5332, 6930, 7671, 7720
Eco147I	AGGCCT	3 cut(s)	2757, 7252, 7644
Eco24I	GRGCYC	4 cut(s)	188, 1533, 5511, 6667
Eco31I	GGTCTC	3 cut(s)	5447, 6198, 7874
Eco47I	GGWCC	7 cut(s)	234, 3802, 4100, 4355, 5181, 7016, 7689
Eco53kI	GAGCTC	2 cut(s)	1531, 6665
Eco57I	CTGAAG	8 cut(s)	1695, 2372, 3153, 3266, 4454, 5550, 6066, 7460
Eco72I	CACGTG	1 cut(s)	7409
Eco81I	CCTNAGG	1 cut(s)	1861
Eco88I	CYCGRG	1 cut(s)	3117
EcoICRI	GAGCTC	2 cut(s)	1531, 6665
EcoNI	CCTNNNNNAGG	2 cut(s)	797, 4200
EcoO109I	RGGNCCY	5 cut(s)	184, 185, 3802, 4738, 4948
EcoRI	GAATTC	1 cut(s)	1112
EcoRII	CCWGG	8 cut(s)	2139, 2571, 4734, 5749, 6937, 7247, 7290, 7558
EcoT14I	CCWWGG	8 cut(s)	237, 3848, 4536, 4758, 5332, 6930, 7671, 7720
EcoT22I	ATGCAT	2 cut(s)	3797, 4452
EcoT38I	GRGCYC	4 cut(s)	188, 1533, 5511, 6667
ErhI	CCWWGG	8 cut(s)	237, 3848, 4536, 4758, 5332, 6930, 7671, 7720
FaqI	GGGAC	8 cut(s)	1885, 3673, 3815, 4237, 5491, 6179, 6242, 6848
FauI	CCCGC	3 cut(s)	392, 2790, 4467
FauNDI	CATATG	5 cut(s)	1524, 1551, 2409, 3911, 4752
FbaI	TGATCA	1 cut(s)	7570
FblI	GTMKAC	2 cut(s)	3606, 4694
FriOI	GRGCYC	4 cut(s)	188, 1533, 5511, 6667
FspAI	RTGCGCAY	1 cut(s)	6407
FspI	TGCGCA	1 cut(s)	6407
GlaI	GCGC	5 cut(s)	1094, 1295, 4411, 6407, 7598
GsaI	CCCAGC	2 cut(s)	225, 1247
GsuI	CTGGAG	4 cut(s)	4101, 5772, 5868, 6222
HaeII	RGCGCY	2 cut(s)	4413, 7600
HapII	CCGG	7 cut(s)	627, 2668, 3525, 4678, 5584, 5669, 7512
HgaI	GACGC	3 cut(s)	478, 4287, 7649
HhaI	GCGC	5 cut(s)	1095, 1296, 4412, 6408, 7599
Hin1I	GRCGYC	1 cut(s)	470
Hin6I	GCGC	5 cut(s)	1093, 1294, 4410, 6406, 7597
HinP1I	GCGC	5 cut(s)	1093, 1294, 4410, 6406, 7597
HincII	GTYRAC	3 cut(s)	2955, 5416, 5985
HindII	GTYRAC	3 cut(s)	2955, 5416, 5985
HindIII	AAGCTT	6 cut(s)	2384, 2840, 3352, 3947, 5630, 6852
HpaI	GTTAAC	1 cut(s)	2955
HpaII	CCGG	7 cut(s)	627, 2668, 3525, 4678, 5584, 5669, 7512
Hpy99I	CGWCG	3 cut(s)	234, 2250, 7665
Hsp92I	GRCGYC	1 cut(s)	470
HspAI	GCGC	5 cut(s)	1093, 1294, 4410, 6406, 7597
KflI	GGGWCCC	1 cut(s)	3802
Kpn2I	TCCGGA	1 cut(s)	3524
KpnI	GGTACC	1 cut(s)	6945
Ksp22I	TGATCA	1 cut(s)	7570
KspAI	GTTAAC	1 cut(s)	2955
LguI	GCTCTTC	2 cut(s)	71, 3780
MfeI	CAATTG	3 cut(s)	1043, 1422, 5113
MhlI	GDGCHC	9 cut(s)	188, 1533, 2376, 2707, 2836, 3633, 4717, 5511, 6667
MlyI	GAGTC	9 cut(s)	1766, 1867, 2015, 4166, 5133, 5473, 6080, 6911, 7443
MmeI	TCCRAC	5 cut(s)	1388, 2527, 4877, 5759, 7889
Mph1103I	ATGCAT	2 cut(s)	3797, 4452
MroI	TCCGGA	1 cut(s)	3524
MroXI	GAANNNNTTC	9 cut(s)	2625, 3279, 3674, 6084, 7042, 7715, 7817, 7834, 7860
MslI	CAYNNNNRTG	6 cut(s)	3600, 4314, 4899, 5283, 5874, 6619
MspI	CCGG	7 cut(s)	627, 2668, 3525, 4678, 5584, 5669, 7512
MunI	CAATTG	3 cut(s)	1043, 1422, 5113
Mva1269I	GAATGC	4 cut(s)	2236, 2602, 7461, 7676
MvaI	CCWGG	8 cut(s)	2141, 2573, 4736, 5751, 6939, 7249, 7292, 7560
MvnI	CGCG	3 cut(s)	108, 1093, 4569
NciI	CCSGG	3 cut(s)	4679, 5584, 7513
NcoI	CCATGG	2 cut(s)	3848, 5332
NdeI	CATATG	5 cut(s)	1524, 1551, 2409, 3911, 4752
NmeAIII	GCCGAG	4 cut(s)	1855, 1862, 3733, 6493
NsbI	TGCGCA	1 cut(s)	6407
NsiI	ATGCAT	2 cut(s)	3797, 4452
NspI	RCATGY	9 cut(s)	1398, 3234, 4450, 4601, 5717, 5851, 6445, 6874, 7963
OliI	CACNNNNGTG	1 cut(s)	5874
PaeI	GCATGC	1 cut(s)	6445
PaeR7I	CTCGAG	1 cut(s)	3117
PagI	TCATGA	2 cut(s)	727, 4414
PaqCI	CACCTGC	1 cut(s)	7604
PceI	AGGCCT	3 cut(s)	2757, 7252, 7644
PciI	ACATGT	4 cut(s)	1394, 5847, 6870, 7959
PciSI	GCTCTTC	2 cut(s)	71, 3780
PcsI	WCGNNNNNNNCGW	2 cut(s)	4492, 5399
PctI	GAATGC	4 cut(s)	2236, 2602, 7461, 7676
PdmI	GAANNNNTTC	9 cut(s)	2625, 3279, 3674, 6084, 7042, 7715, 7817, 7834, 7860
PflMI	CCANNNNNTGG	1 cut(s)	6674
PfoI	TCCNGGA	1 cut(s)	5749
PleI	GAGTC	9 cut(s)	1765, 1867, 2014, 4165, 5133, 5473, 6079, 6910, 7442
PmaCI	CACGTG	1 cut(s)	7409
PmlI	CACGTG	1 cut(s)	7409
PpsI	GAGTC	9 cut(s)	1765, 1867, 2014, 4165, 5133, 5473, 6079, 6910, 7442
Ppu21I	YACGTR	4 cut(s)	2684, 3500, 4292, 7409
PpuMI	RGGWCCY	1 cut(s)	3802
PscI	ACATGT	4 cut(s)	1394, 5847, 6870, 7959
PsiI	TTATAA	5 cut(s)	1268, 2000, 3201, 3398, 4443
Psp124BI	GAGCTC	2 cut(s)	1533, 6667
Psp5II	RGGWCCY	1 cut(s)	3802
Psp6I	CCWGG	8 cut(s)	2139, 2571, 4734, 5749, 6937, 7247, 7290, 7558
PspCI	CACGTG	1 cut(s)	7409
PspFI	CCCAGC	2 cut(s)	221, 1243
PspGI	CCWGG	8 cut(s)	2139, 2571, 4734, 5749, 6937, 7247, 7290, 7558
PspOMI	GGGCCC	1 cut(s)	184
PspPPI	RGGWCCY	1 cut(s)	3802
PsrI	GAACNNNNNNTAC	6 cut(s)	2060, 2092, 4833, 4865, 7086, 7118
PstI	CTGCAG	3 cut(s)	5350, 5413, 6967
PstNI	CAGNNNCTG	3 cut(s)	1412, 2054, 6971
RseI	CAYNNNNRTG	6 cut(s)	3600, 4314, 4899, 5283, 5874, 6619
SacI	GAGCTC	2 cut(s)	1533, 6667
SapI	GCTCTTC	2 cut(s)	71, 3780
ScaI	AGTACT	2 cut(s)	2078, 2613
SchI	GAGTC	9 cut(s)	1766, 1867, 2015, 4166, 5133, 5473, 6080, 6911, 7443
SduI	GDGCHC	9 cut(s)	188, 1533, 2376, 2707, 2836, 3633, 4717, 5511, 6667
SfcI	CTRYAG	8 cut(s)	554, 642, 858, 3268, 5346, 5409, 6963, 7103
Sfr274I	CTCGAG	1 cut(s)	3117
SinI	GGWCC	7 cut(s)	234, 3802, 4100, 4355, 5181, 7016, 7689
SlaI	CTCGAG	1 cut(s)	3117
SmiI	ATTTAAAT	1 cut(s)	5649
SmiMI	CAYNNNNRTG	6 cut(s)	3600, 4314, 4899, 5283, 5874, 6619
SpeI	ACTAGT	1 cut(s)	2861
SphI	GCATGC	1 cut(s)	6445
SseBI	AGGCCT	3 cut(s)	2757, 7252, 7644
SspI	AATATT	6 cut(s)	424, 1381, 2586, 3463, 3919, 5158
SstI	GAGCTC	2 cut(s)	1533, 6667
StuI	AGGCCT	3 cut(s)	2757, 7252, 7644
StyI	CCWWGG	8 cut(s)	237, 3848, 4536, 4758, 5332, 6930, 7671, 7720
SwaI	ATTTAAAT	1 cut(s)	5649
TaqII	GACCGA	2 cut(s)	222, 6519
TauI	GCSGC	3 cut(s)	8, 108, 7807
TspGWI	ACGGA	6 cut(s)	436, 1141, 1385, 2962, 5374, 7811
Van91I	CCANNNNNTGG	1 cut(s)	6674
VneI	GTGCAC	3 cut(s)	2372, 3629, 4713
VpaK11BI	GGWCC	7 cut(s)	234, 3802, 4100, 4355, 5181, 7016, 7689
XagI	CCTNNNNNAGG	2 cut(s)	797, 4200
XbaI	TCTAGA	2 cut(s)	1642, 7322
XceI	RCATGY	9 cut(s)	1398, 3234, 4450, 4601, 5717, 5851, 6445, 6874, 7963
XcmI	CCANNNNNNNNNTGG	4 cut(s)	283, 2733, 2985, 3995
XhoI	CTCGAG	1 cut(s)	3117
XmiI	GTMKAC	2 cut(s)	3606, 4694
XmnI	GAANNNNTTC	9 cut(s)	2625, 3279, 3674, 6084, 7042, 7715, 7817, 7834, 7860
ZrmI	AGTACT	2 cut(s)	2078, 2613
Zsp2I	ATGCAT	2 cut(s)	3797, 4452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.