FvH4_5g38010
ERF Family

Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0012258
Physical Location & Seq
Reverse (-)
28068200 .. 28072698
4499 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g38010.t1

Sequence Viewer

Length: 1731 bp
ATGGCGTCGCTGCTCCTCTCACCTCTCCGCTTACGCCATTTTCTCTACAAAAGGCCTAAGCTCAAACCCCCTTCTCCACTCTCCTTCTCTTCCTTCAAACCCCTCCTCAAACTCCGCCCTCGCTTCCCTCCCTATTTACAGTCCTGCCACCGCTCTTCCACCGCCTCTTCCTCCCCACTCGCCGACTCCGACCACAAAACCCACGCGCTCCTACTCGGCAGAGACGAGCGTGCAGCACCACTCAATGGGTCCCATCCGCAGCCGCAGCCGGAGAACGCGACCACAATCGCCGCCATTGTGACGTCACTCGGGGGCCCGCCCGGTGCGGTCGGGATCGTGAGGCTGTCCGGTCCGTCCGCCGTGGCCGTCGTCGGCCGCGTGTTCCGTCCGAGCAGGAGGAAGAGTAAGAGTAAGAGCCCATGGCGACCCACCAGTCATGTGGTTGAATACGGCGTGGTTTTGGACCCAAACGGCAATGTGGTCGATGAGGTTTTAGCTGTGCCTATGTTGGCGCCGAGATCATATACACGTGAAGATGTTGTGGAGCTTCAATGCCATGGGACTCAGGTGTGTCTGAATCGGGTTCTCAGAGCTTGTTTGGAAGCCGGAGCACGCCTCGCGGAACCAGGGGAGTTTACTCTGCGTGCTTTTCTCAATGGCCGGTTGGACCTGACTCAAGCTGAAAATGTTGATAAACTGATTTCGGCCAAGTCTGTGGCTGCAGCAGATGCAGCACTGGCCGCAATTCAGGGTGGCTTTTCTTCCATGGTAAAATCTGTAAGGTTTCAGTGCATTGAGTTGCTTACAGAAATTGAAGCTCGGTTAGATTTTGATGATGAGATGCCACCACTTGATATCAATCAAGTTGTAAATAAGATACATTCCATGTCACAAGATGTTGAGAGTGCTCTAGAGACGGCCAATTACGACCAACTTCTGCAATCTGGATTACAGATAGCGATTCTGGGCCGTCCAAATGTTGGGAAATCAAGCCTCCTCAATGCATGGAGCAAAAAGAAACAATTATATTTCAAGAAGAAGGAAATTTATAGTACTGAGAGAGCTATAGTTACAGAAATTGCTGGGACCACTCGGGATGTGGTTGAAGCCAGTATTACAGTTGGTGGTATTCCTATAACCCTTCTTGATACAGCAGGCATCAGGGAAACCAATGACGTGGTGGAGAAAATCGGTGTGGAGAGGTCAGAAGCAGTGGCTATGGGTGCTGATGTTATTATTATGACAATAAGTGCTCTTGATGGCTGGAGTCCAGAAGACTCTGAACTTCTTGACCGAATTCAATCTAACAAGAAATCGACTGGATCTTCAACTCCAATCATCCTTGTAATTAACAAAATAGATTGTGTTGCTTCTGATTGCTTGGAGCGGGTTCAACAAAATGTCGGTTCTTTCAATAACCATGTTTTGACATCTGCAATCACTGGTCAAGGAATCCAAGATTTGGAGAAGGCAATATTAGATATTGTTGGTCTCAACAAATTTCGAGGAGGGAGTCGAAGGTGGACTGTGAACCAGAGACAATTCGAGCAGCTTGTCCGAACAAAAGAGGCTCTTGCAAGGTTGAAATCCTCAATAGAGGAGGAAATTCCTTTTGACTTCTGGACGATTGATTTGAGGGAAGCTGCAATGGCCCTTGGCCAAATAAGTGGAGAAGACATTTCGGAGGAGGTTTTGACCAACATCTTTGGCAAGTTCTGCATTGGTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMR_HSR1 MnmE_helical TrmE_N

Protein Analysis

577

Amino Acids

62.86

Weight (kDa)

7.6

Isoelectric Point (pI)

48.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TrmE_N PF10396 95 - 221 3.4e-37 GTP-binding protein TrmE N-terminus
MnmE_helical PF12631 224 - 573 7.4e-49 MnmE helical domain
MMR_HSR1 PF01926 318 - 452 2.1e-21 50S ribosome-binding GTPase
GTP_EFTU PF00009 318 - 495 3.6e-07 Elongation factor Tu GTP binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012258)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78010
fragaria_vesca FvH4_5g38010 FvH4_5g38010
malus_domestica MD08G1177300.v1.1 MD15G1355000.v1.1
prunus_persica Prupe.1G511900_v2.0.a1
pyrus_communis pycom08g15220
rosa_chinensis RchiOBHm_Chr7g0239951
rosa_laevigata RLG00000000715
rosa_multiflora Rmu_sc0000540.1_g000022 Rmu_sc0006825.1_g000001 Rmu_sc0035965.1_g000001
rosa_roxburghii Rroxscaffold_3G00220600
rosa_rugosa Rorug07G0331400
rosa_samantha Rh7AG485100 Rh7BG458100 Rh7CG502400 Rh7DG470700
rosa_wichuraiana Rw7G040690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 432
AatII GACGTC 1 cut(s) 305
AccB1I GGYRCC 1 cut(s) 511
AccB7I CCANNNNNTGG 3 cut(s) 245, 980, 1462
AccBSI CCGCTC 2 cut(s) 153, 1387
AccII CGCG 4 cut(s) 206, 278, 378, 620
AclWI GGATC 2 cut(s) 341, 1330
AcoI YGGCCR 7 cut(s) 363, 373, 658, 705, 738, 918, 1657
AcsI RAATTY 4 cut(s) 1044, 1296, 1499, 1605
AcvI CACGTG 1 cut(s) 530
AcyI GRCGYC 3 cut(s) 5, 302, 512
AfaI GTAC 1 cut(s) 1054
AfiI CCNNNNNNNGG 3 cut(s) 245, 980, 1462
AflIII ACRYGT 1 cut(s) 527
AjiI CACGTC 1 cut(s) 1177
AjnI CCWGG 1 cut(s) 625
AluBI AGCT 9 cut(s) 61, 497, 547, 593, 680, 818, 1064, 1552, 1643
AluI AGCT 9 cut(s) 61, 497, 547, 593, 680, 818, 1064, 1552, 1643
Alw21I GWGCWC 3 cut(s) 613, 910, 1255
Alw26I GTCTC 4 cut(s) 216, 908, 1496, 1531
AlwI GGATC 2 cut(s) 341, 1330
Ama87I CYCGRG 2 cut(s) 308, 1092
ApaI GGGCCC 1 cut(s) 317
ApeKI GCWGC 9 cut(s) 10, 233, 259, 265, 719, 722, 731, 1549, 1643
ApoI RAATTY 4 cut(s) 1044, 1296, 1499, 1605
ArsI GACNNNNNNTTYG 2 cut(s) 1615, 1647
AspLEI GCGC 2 cut(s) 208, 514
AspS9I GGNCC 9 cut(s) 249, 313, 314, 350, 463, 667, 967, 1086, 1651
AsuC2I CCSGG 1 cut(s) 321
AsuHPI GGTGA 1 cut(s) 12
AvaI CYCGRG 2 cut(s) 308, 1092
AvaII GGWCC 5 cut(s) 249, 350, 463, 667, 1086
BaeGI GKGCMC 1 cut(s) 317
BalI TGGCCA 1 cut(s) 1659
BanI GGYRCC 1 cut(s) 511
BanII GRGCYC 2 cut(s) 317, 419
BbrPI CACGTG 1 cut(s) 530
BbsI GAAGAC 2 cut(s) 1281, 1680
Bbv12I GWGCWC 3 cut(s) 613, 910, 1255
BbvI GCAGC 8 cut(s) 245, 271, 277, 706, 734, 743, 1561, 1630
BccI CCATC 2 cut(s) 261, 1253
BceAI ACGGC 6 cut(s) 344, 350, 466, 487, 933, 954
BcgI CGANNNNNNTGC 2 cut(s) 463, 497
BciT130I CCWGG 1 cut(s) 627
BcnI CCSGG 1 cut(s) 321
BcoDI GTCTC 4 cut(s) 216, 908, 1496, 1531
BfaI CTAG 1 cut(s) 911
BfmI CTRYAG 2 cut(s) 720, 1065
BfoI RGCGCY 1 cut(s) 515
BmcAI AGTACT 1 cut(s) 1054
Bme1390I CCNGG 2 cut(s) 321, 627
Bme18I GGWCC 5 cut(s) 249, 350, 463, 667, 1086
BmeT110I CYCGRG 2 cut(s) 308, 1092
BmgBI CACGTC 1 cut(s) 1177
BmgT120I GGNCC 9 cut(s) 249, 313, 314, 350, 463, 667, 967, 1086, 1651
BmiI GGNNCC 8 cut(s) 250, 251, 314, 315, 465, 513, 624, 1087
BmrFI CCNGG 2 cut(s) 321, 627
BmsI GCATC 3 cut(s) 718, 831, 1167
BpiI GAAGAC 2 cut(s) 1281, 1680
BplI GAGNNNNNCTC 2 cut(s) 600, 632
BpmI CTGGAG 1 cut(s) 1285
Bpu10I CCTNAGC 1 cut(s) 57
BpuEI CTTGAG 1 cut(s) 660
BpuMI CCSGG 1 cut(s) 321
BsaAI YACGTR 1 cut(s) 530
BsaBI GATNNNNATC 1 cut(s) 858
BsaHI GRCGYC 3 cut(s) 5, 302, 512
BsaI GGTCTC 1 cut(s) 1496
BsaJI CCNNGG 6 cut(s) 360, 419, 556, 626, 765, 1654
BsaWI WCCGGW 1 cut(s) 347
BsaXI ACNNNNNCTCC 2 cut(s) 388, 418
Bsc4I CCNNNNNNNGG 3 cut(s) 245, 980, 1462
Bse118I RCCGGY 1 cut(s) 660
Bse1I ACTGG 5 cut(s) 432, 741, 1110, 1324, 1447
Bse3DI GCAATG 2 cut(s) 481, 1653
Bse8I GATNNNNATC 1 cut(s) 858
BseBI CCWGG 1 cut(s) 627
BseDI CCNNGG 6 cut(s) 360, 419, 556, 626, 765, 1654
BseGI GGATG 3 cut(s) 253, 1102, 1338
BseJI GATNNNNATC 1 cut(s) 858
BseLI CCNNNNNNNGG 3 cut(s) 245, 980, 1462
BseMI GCAATG 2 cut(s) 481, 1653
BseMII CTCAG 3 cut(s) 578, 601, 1047
BseNI ACTGG 5 cut(s) 432, 741, 1110, 1324, 1447
BseRI GAGGAG 6 cut(s) 5, 95, 986, 1521, 1613, 1700
BseSI GKGCMC 1 cut(s) 317
BseX3I CGGCCG 1 cut(s) 373
BseXI GCAGC 8 cut(s) 245, 271, 277, 706, 734, 743, 1561, 1630
BseYI CCCAGC 1 cut(s) 1082
BsgI GTGCAG 1 cut(s) 252
Bsh1236I CGCG 4 cut(s) 206, 278, 378, 620
Bsh1285I CGRYCG 2 cut(s) 330, 376
BshNI GGYRCC 1 cut(s) 511
BsiEI CGRYCG 2 cut(s) 330, 376
BsiHKAI GWGCWC 3 cut(s) 613, 910, 1255
BsiHKCI CYCGRG 2 cut(s) 308, 1092
BsiSI CCGG 5 cut(s) 269, 321, 348, 606, 661
BslFI GGGAC 3 cut(s) 235, 574, 1099
BslI CCNNNNNNNGG 3 cut(s) 245, 980, 1462
BsmAI GTCTC 4 cut(s) 216, 908, 1496, 1531
BsmBI CGTCTC 2 cut(s) 216, 908
BsmFI GGGAC 3 cut(s) 235, 574, 1099
Bso31I GGTCTC 1 cut(s) 1496
BsoBI CYCGRG 2 cut(s) 308, 1092
Bsp120I GGGCCC 1 cut(s) 313
Bsp1286I GDGCHC 5 cut(s) 317, 419, 613, 910, 1255
Bsp143I GATC 3 cut(s) 333, 518, 1322
Bsp19I CCATGG 3 cut(s) 419, 556, 765
BspCNI CTCAG 3 cut(s) 577, 600, 1048
BspFNI CGCG 4 cut(s) 206, 278, 378, 620
BspLI GGNNCC 8 cut(s) 250, 251, 314, 315, 465, 513, 624, 1087
BspMAI CTGCAG 1 cut(s) 724
BspPI GGATC 2 cut(s) 341, 1330
BspQI GCTCTTC 1 cut(s) 160
BspT107I GGYRCC 1 cut(s) 511
BspTNI GGTCTC 1 cut(s) 1496
BsrBI CCGCTC 2 cut(s) 153, 1387
BsrDI GCAATG 2 cut(s) 481, 1653
BsrFI RCCGGY 1 cut(s) 660
BsrI ACTGG 5 cut(s) 432, 741, 1110, 1324, 1447
BssAI RCCGGY 1 cut(s) 660
BssECI CCNNGG 6 cut(s) 360, 419, 556, 626, 765, 1654
BssMI GATC 3 cut(s) 333, 518, 1322
BssNI GRCGYC 3 cut(s) 5, 302, 512
BssT1I CCWWGG 4 cut(s) 419, 556, 765, 1654
Bst2UI CCWGG 1 cut(s) 627
Bst4CI ACNGT 3 cut(s) 141, 1120, 1528
Bst6I CTCTTC 4 cut(s) 94, 160, 172, 395
BstACI GRCGYC 3 cut(s) 5, 302, 512
BstAPI GCANNNNNTGC 2 cut(s) 728, 1716
BstBAI YACGTR 1 cut(s) 530
BstC8I GCNNGC 5 cut(s) 231, 317, 613, 645, 1156
BstDEI CTNAG 4 cut(s) 57, 564, 587, 1056
BstDSI CCRYGG 4 cut(s) 360, 419, 556, 765
BstF5I GGATG 3 cut(s) 253, 1102, 1338
BstFNI CGCG 4 cut(s) 206, 278, 378, 620
BstH2I RGCGCY 1 cut(s) 515
BstHHI GCGC 2 cut(s) 208, 514
BstKTI GATC 3 cut(s) 336, 521, 1325
BstMAI GTCTC 4 cut(s) 216, 908, 1496, 1531
BstMBI GATC 3 cut(s) 333, 518, 1322
BstMCI CGRYCG 2 cut(s) 330, 376
BstMWI GCNNNNNNNGC 9 cut(s) 265, 617, 728, 731, 737, 740, 1223, 1649, 1716
BstNI CCWGG 1 cut(s) 627
BstSCI CCNGG 2 cut(s) 319, 625
BstSFI CTRYAG 2 cut(s) 720, 1065
BstSLI GKGCMC 1 cut(s) 317
BstUI CGCG 4 cut(s) 206, 278, 378, 620
BstV1I GCAGC 8 cut(s) 245, 271, 277, 706, 734, 743, 1561, 1630
BstV2I GAAGAC 2 cut(s) 1281, 1680
BstX2I RGATCY 1 cut(s) 1322
BstXI CCANNNNNNTGG 4 cut(s) 439, 715, 1177, 1667
BstYI RGATCY 1 cut(s) 1322
BstZI CGGCCG 1 cut(s) 373
BtgI CCRYGG 4 cut(s) 360, 419, 556, 765
BtrI CACGTC 1 cut(s) 1177
BtsCI GGATG 3 cut(s) 253, 1102, 1338
BtsI GCAGTG 1 cut(s) 1218
BtsIMutI CAGTG 4 cut(s) 734, 794, 1218, 1440
Cac8I GCNNGC 5 cut(s) 231, 317, 613, 645, 1156
CfoI GCGC 2 cut(s) 208, 514
Cfr10I RCCGGY 1 cut(s) 660
Cfr13I GGNCC 9 cut(s) 249, 313, 314, 350, 463, 667, 967, 1086, 1651
CpoI CGGWCCG 1 cut(s) 350
Csp6I GTAC 1 cut(s) 1053
CspI CGGWCCG 1 cut(s) 350
CviAII CATG 7 cut(s) 420, 437, 557, 766, 886, 1005, 1421
CviQI GTAC 1 cut(s) 1053
DdeI CTNAG 4 cut(s) 57, 564, 587, 1056
DinI GGCGCC 1 cut(s) 513
DpnI GATC 3 cut(s) 335, 520, 1324
DpnII GATC 3 cut(s) 333, 518, 1322
DrdI GACNNNNNNGTC 1 cut(s) 432
DseDI GACNNNNNNGTC 1 cut(s) 432
EaeI YGGCCR 7 cut(s) 363, 373, 658, 705, 738, 918, 1657
EagI CGGCCG 1 cut(s) 373
Eam1104I CTCTTC 4 cut(s) 94, 160, 172, 395
EarI CTCTTC 4 cut(s) 94, 160, 172, 395
EciI GGCGGA 2 cut(s) 104, 346
EclXI CGGCCG 1 cut(s) 373
Eco130I CCWWGG 4 cut(s) 419, 556, 765, 1654
Eco147I AGGCCT 1 cut(s) 55
Eco24I GRGCYC 2 cut(s) 317, 419
Eco31I GGTCTC 1 cut(s) 1496
Eco32I GATATC 1 cut(s) 856
Eco47I GGWCC 5 cut(s) 249, 350, 463, 667, 1086
Eco52I CGGCCG 1 cut(s) 373
Eco72I CACGTG 1 cut(s) 530
Eco88I CYCGRG 2 cut(s) 308, 1092
EcoO109I RGGNCCY 2 cut(s) 249, 313
EcoRI GAATTC 1 cut(s) 1296
EcoRII CCWGG 1 cut(s) 625
EcoRV GATATC 1 cut(s) 856
EcoT14I CCWWGG 4 cut(s) 419, 556, 765, 1654
EcoT22I ATGCAT 1 cut(s) 1006
EcoT38I GRGCYC 2 cut(s) 317, 419
EgeI GGCGCC 1 cut(s) 513
EheI GGCGCC 1 cut(s) 513
ErhI CCWWGG 4 cut(s) 419, 556, 765, 1654
Esp3I CGTCTC 2 cut(s) 216, 908
FaeI CATG 7 cut(s) 423, 440, 560, 769, 889, 1008, 1424
FalI AAGNNNNNCTT 2 cut(s) 1557, 1589
FaqI GGGAC 3 cut(s) 235, 574, 1099
FatI CATG 7 cut(s) 419, 436, 556, 765, 885, 1004, 1420
FauI CCCGC 2 cut(s) 324, 1380
FokI GGATG 3 cut(s) 240, 1109, 1325
FriOI GRGCYC 2 cut(s) 317, 419
FspBI CTAG 1 cut(s) 911
GlaI GCGC 2 cut(s) 207, 513
GsaI CCCAGC 1 cut(s) 1086
GsuI CTGGAG 1 cut(s) 1285
HaeII RGCGCY 1 cut(s) 515
HapII CCGG 5 cut(s) 269, 321, 348, 606, 661
HhaI GCGC 2 cut(s) 208, 514
Hin1I GRCGYC 3 cut(s) 5, 302, 512
Hin1II CATG 7 cut(s) 423, 440, 560, 769, 889, 1008, 1424
Hin6I GCGC 2 cut(s) 206, 512
HinP1I GCGC 2 cut(s) 206, 512
HinfI GANTC 9 cut(s) 185, 562, 577, 673, 961, 1267, 1277, 1452, 1513
HpaII CCGG 5 cut(s) 269, 321, 348, 606, 661
HphI GGTGA 1 cut(s) 12
Hpy166II GTNNAC 3 cut(s) 636, 1524, 1531
Hpy188I TCNGA 9 cut(s) 190, 390, 576, 590, 1207, 1282, 1375, 1559, 1684
Hpy8I GTNNAC 3 cut(s) 636, 1524, 1531
Hpy99I CGWCG 3 cut(s) 10, 371, 374
HpyAV CCTTC 7 cut(s) 81, 94, 103, 1033, 1151, 1462, 1512
HpyCH4III ACNGT 3 cut(s) 141, 1120, 1528
HpyCH4IV ACGT 3 cut(s) 302, 529, 1176
HpyF10VI GCNNNNNNNGC 9 cut(s) 265, 617, 728, 731, 737, 740, 1223, 1649, 1716
HpyF3I CTNAG 4 cut(s) 57, 564, 587, 1056
HpySE526I ACGT 3 cut(s) 302, 529, 1176
Hsp92I GRCGYC 3 cut(s) 5, 302, 512
Hsp92II CATG 7 cut(s) 423, 440, 560, 769, 889, 1008, 1424
HspAI GCGC 2 cut(s) 206, 512
KasI GGCGCC 1 cut(s) 511
KflI GGGWCCC 1 cut(s) 249
Kzo9I GATC 3 cut(s) 333, 518, 1322
LguI GCTCTTC 1 cut(s) 160
LmnI GCTCC 6 cut(s) 18, 213, 544, 608, 1008, 1384
Lsp1109I GCAGC 8 cut(s) 245, 271, 277, 706, 734, 743, 1561, 1630
LweI GCATC 3 cut(s) 718, 831, 1167
MaeI CTAG 1 cut(s) 911
MaeII ACGT 3 cut(s) 302, 529, 1176
MaeIII GTNAC 4 cut(s) 298, 303, 888, 1069
MalI GATC 3 cut(s) 335, 520, 1324
MbiI CCGCTC 2 cut(s) 153, 1387
MboI GATC 3 cut(s) 333, 518, 1322
MflI RGATCY 1 cut(s) 1322
MhlI GDGCHC 5 cut(s) 317, 419, 613, 910, 1255
MlsI TGGCCA 1 cut(s) 1659
MluNI TGGCCA 1 cut(s) 1659
Mly113I GGCGCC 1 cut(s) 512
MlyI GAGTC 6 cut(s) 179, 556, 667, 1271, 1276, 1522
MmeI TCCRAC 2 cut(s) 213, 645
Mox20I TGGCCA 1 cut(s) 1659
Mph1103I ATGCAT 1 cut(s) 1006
MscI TGGCCA 1 cut(s) 1659
MseI TTAA 1 cut(s) 1350
Msp20I TGGCCA 1 cut(s) 1659
MspI CCGG 5 cut(s) 269, 321, 348, 606, 661
MspR9I CCNGG 2 cut(s) 321, 627
MvaI CCWGG 1 cut(s) 627
MvnI CGCG 4 cut(s) 206, 278, 378, 620
MwoI GCNNNNNNNGC 9 cut(s) 265, 617, 728, 731, 737, 740, 1223, 1649, 1716
NarI GGCGCC 1 cut(s) 512
NciI CCSGG 1 cut(s) 321
NcoI CCATGG 3 cut(s) 419, 556, 765
NdeII GATC 3 cut(s) 333, 518, 1322
NlaIII CATG 7 cut(s) 423, 440, 560, 769, 889, 1008, 1424
NlaIV GGNNCC 8 cut(s) 250, 251, 314, 315, 465, 513, 624, 1087
NmeAIII GCCGAG 2 cut(s) 195, 540
NmuCI GTSAC 3 cut(s) 298, 303, 888
NsiI ATGCAT 1 cut(s) 1006
PceI AGGCCT 1 cut(s) 55
PciSI GCTCTTC 1 cut(s) 160
PcsI WCGNNNNNNNCGW 3 cut(s) 186, 222, 375
PfeI GAWTC 3 cut(s) 577, 961, 1452
PflMI CCANNNNNTGG 3 cut(s) 245, 980, 1462
PleI GAGTC 6 cut(s) 179, 556, 667, 1271, 1275, 1521
PluTI GGCGCC 1 cut(s) 515
PmaCI CACGTG 1 cut(s) 530
PmlI CACGTG 1 cut(s) 530
PpsI GAGTC 6 cut(s) 179, 556, 667, 1271, 1275, 1521
Ppu21I YACGTR 1 cut(s) 530
PpuMI RGGWCCY 1 cut(s) 249
Psp5II RGGWCCY 1 cut(s) 249
Psp6I CCWGG 1 cut(s) 625
PspCI CACGTG 1 cut(s) 530
PspFI CCCAGC 1 cut(s) 1082
PspGI CCWGG 1 cut(s) 625
PspN4I GGNNCC 8 cut(s) 250, 251, 314, 315, 465, 513, 624, 1087
PspOMI GGGCCC 1 cut(s) 313
PspPI GGNCC 9 cut(s) 249, 313, 314, 350, 463, 667, 967, 1086, 1651
PspPPI RGGWCCY 1 cut(s) 249
PstI CTGCAG 1 cut(s) 724
PsuI RGATCY 1 cut(s) 1322
RsaI GTAC 1 cut(s) 1054
RsaNI GTAC 1 cut(s) 1053
Rsr2I CGGWCCG 1 cut(s) 350
RsrII CGGWCCG 1 cut(s) 350
SapI GCTCTTC 1 cut(s) 160
SaqAI TTAA 1 cut(s) 1350
Sau3AI GATC 3 cut(s) 333, 518, 1322
Sau96I GGNCC 9 cut(s) 249, 313, 314, 350, 463, 667, 967, 1086, 1651
ScaI AGTACT 1 cut(s) 1054
SchI GAGTC 6 cut(s) 179, 556, 667, 1271, 1276, 1522
ScrFI CCNGG 2 cut(s) 321, 627
SduI GDGCHC 5 cut(s) 317, 419, 613, 910, 1255
SfaNI GCATC 3 cut(s) 718, 831, 1167
SfcI CTRYAG 2 cut(s) 720, 1065
SfoI GGCGCC 1 cut(s) 513
SinI GGWCC 5 cut(s) 249, 350, 463, 667, 1086
SmlI CTYRAG 1 cut(s) 675
SmoI CTYRAG 1 cut(s) 675
SseBI AGGCCT 1 cut(s) 55
SspDI GGCGCC 1 cut(s) 511
SspI AATATT 1 cut(s) 1476
SspMI CTAG 1 cut(s) 911
StuI AGGCCT 1 cut(s) 55
StyD4I CCNGG 2 cut(s) 319, 625
StyI CCWWGG 4 cut(s) 419, 556, 765, 1654
TaaI ACNGT 3 cut(s) 141, 1120, 1528
TaiI ACGT 3 cut(s) 305, 532, 1179
TaqI TCGA 5 cut(s) 483, 1316, 1504, 1516, 1545
TaqII GACCGA 1 cut(s) 1308
TatI WGTACW 1 cut(s) 1052
TauI GCSGC 4 cut(s) 265, 293, 378, 743
TfiI GAWTC 3 cut(s) 577, 961, 1452
Tru1I TTAA 1 cut(s) 1350
Tru9I TTAA 1 cut(s) 1350
TscAI CASTG 4 cut(s) 741, 794, 1218, 1447
TseFI GTSAC 3 cut(s) 298, 303, 888
TseI GCWGC 9 cut(s) 10, 233, 259, 265, 719, 722, 731, 1549, 1643
Tsp45I GTSAC 3 cut(s) 298, 303, 888
TspGWI ACGGA 2 cut(s) 342, 374
TspRI CASTG 4 cut(s) 741, 794, 1218, 1447
Van91I CCANNNNNTGG 3 cut(s) 245, 980, 1462
VpaK11BI GGWCC 5 cut(s) 249, 350, 463, 667, 1086
XapI RAATTY 4 cut(s) 1044, 1296, 1499, 1605
XbaI TCTAGA 1 cut(s) 910
XcmI CCANNNNNNNNNTGG 3 cut(s) 436, 1096, 1177
XspI CTAG 1 cut(s) 911
ZraI GACGTC 1 cut(s) 303
ZrmI AGTACT 1 cut(s) 1054
Zsp2I ATGCAT 1 cut(s) 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.