Rh7BG458100
ERF Family

Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0012258
Physical Location & Seq
Reverse (-)
54285599 .. 54289854
4256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG458100.1

Sequence Viewer

Length: 1701 bp
ATGGGTTTAAGCCTTTGTACACTTCTCAGGCCCAGACTAGAGTTTACTGATAAACAAAGATACATAACTCTTCTCGGCGGTGACAGAAAATCAAAAACATCAATGGCCTCTCTGCTCTCACCTCTCCGCTTTCGCCATTTTCTATACAGAAGGCCTAAACTTAAACCCCCTTATCCACTCTCCTCCATATCTTCTTCCGCTTCCTTCAAACCCCTCCTCAAACTCCGCCCTCGCTCCCCTCCCTATTTACACTCCTGCCACTGCTCCTTCACCGCCTCTTCCCCATTCGCGGACTCCGACTACAAAACCCAGACGCTGCTTCTCGGCAAAGACGAGCGAGCAGCAGTAGTGACTGGGTCCCAGCCGCAGTCGGAGAGCGCGAGCACAATCGCCGCCATTGTGACGTCAGTTGGGGGCCCACCCGGCGCGGTTGGGATCGTGCGGCTGTCCGGTCCGTCCGCCGTGGCCGTCGTCGGCCGCGTGTTCCGTCCGAGCAAGAAAAAGAGGAAGAGCAAGAGCTCTGGTGCTGAGCCGTGGCGACCCACTAGTCATGTGATCGAATACGGCGTCGTTTTGGACCCCAACGGCAATGTCGTCGACGAGGTTTTAGCTGTGCCAATGTTGGCCCCGAGATCATATACACGTGAAGATGTGGTGGAGCTTCAATGCCATGGGACTCAAGTGTGTCTGAACCGGGTTCTCAGAGCTTGTTTAGAAGCTGGAGCAAGGCTTGCGGAACCAGGTGAGTTTACTTTGCGTGCTTTTCTCAATGGCCGCTTGGACCTGACTCAAGCTGAAAATGTTGACAAACTCATTTCGGCCAAGTCTGTGGCTGCAGCAGATGCAGCACTGGCCGCGATTCAGGGTGGCTTTTCTTCCATGGTAAAATCTGTAAGATTTCAGTGCATTGAGTTGCTTACTGAAATTGAAGCCCGGTTAGATTTTGATGATGAGATGCCACCGCTTGATATCAATGAAGTTGTAAATAAAATACATTCCATGTCACAAGATGTTGAGAGTGCTCTAGAGACAGCCAATTATGACCAACTTCTGCAATCTGGATTACAGATAGCAATTCTGGGCCGTCCAAATGTTGGGAAATCAAGCCTCCTCAATGCATGGAGCAAAACTGAGAGAGCTATAGTTACAGAAGTTGCTGGGACCACTCGGGATGTGGTTGAAGCCAGTATTACAGTTAGTGGTATTCCTGTAACCCTTCTTGATACAGCAGGCATCAGGGAAACCGCTGACATAGTGGAGAAAATTGGGGTGGAGAGGTCTGAAGCAATTGCTATGGGTGCTGATGTCATTATTATGGCAATAAGTGCTCTTGATGGCTGGAGTCCAGAAGACTCTGAACTTCTTGACAGAATCCAATCTAACAAGAAATCGACTGGATCTTCAACCCCAATGATCCTTGTAATTAACAAAATAGATTGTGTTGCATCTGATTGCTTGGAGCGGGTTCAAAAAAATGTCGGTTCTTTCAATAAGCGTGTCTTGACATCTGCCATCACTGGTCAAGGAATCCAAGATTTGGAGAAGGCAATATTAGATATTGTTGGTCTCAACAAATTTCCTGCAGGGAGTCGAAGGTGGACTGTGAACCAGGTTAGGAATTCGTTAAATTTATATATTATGGTGTCTGTGTTCTGTACCGTTTCTTACGCACCAAACTTGAAAGCATTTGCTGGTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMR_HSR1 MnmE_helical TrmE_N

Protein Analysis

566

Amino Acids

61.18

Weight (kDa)

8.78

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TrmE_N PF10396 129 - 259 3.4e-37 GTP-binding protein TrmE N-terminus
MnmE_helical PF12631 262 - 525 8.9e-27 MnmE helical domain
MMR_HSR1 PF01926 356 - 477 2.7e-24 50S ribosome-binding GTPase
FeoB_N PF02421 356 - 517 2.8e-08 Ferrous iron transport protein B
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012258)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78010
fragaria_vesca FvH4_5g38010 FvH4_5g38010
malus_domestica MD08G1177300.v1.1 MD15G1355000.v1.1
prunus_persica Prupe.1G511900_v2.0.a1
pyrus_communis pycom08g15220
rosa_chinensis RchiOBHm_Chr7g0239951
rosa_laevigata RLG00000000715
rosa_multiflora Rmu_sc0000540.1_g000022 Rmu_sc0006825.1_g000001 Rmu_sc0035965.1_g000001
rosa_roxburghii Rroxscaffold_3G00220600
rosa_rugosa Rorug07G0331400
rosa_samantha Rh7AG485100 Rh7BG458100 Rh7CG502400 Rh7DG470700
rosa_wichuraiana Rw7G040690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 546
AatII GACGTC 1 cut(s) 407
AccB7I CCANNNNNTGG 2 cut(s) 1094, 1537
AccBSI CCGCTC 1 cut(s) 1462
AccI GTMKAC 1 cut(s) 597
AccII CGCG 5 cut(s) 290, 380, 428, 480, 857
AclWI GGATC 3 cut(s) 443, 1405, 1408
AcoI YGGCCR 5 cut(s) 465, 475, 772, 819, 852
AcsI RAATTY 3 cut(s) 1574, 1618, 1627
AcuI CTGAAG 1 cut(s) 1302
AcvI CACGTG 1 cut(s) 644
AcyI GRCGYC 2 cut(s) 404, 567
AfaI GTAC 2 cut(s) 19, 1657
AfiI CCNNNNNNNGG 3 cut(s) 289, 1094, 1537
AflIII ACRYGT 1 cut(s) 641
AgsI TTSAA 8 cut(s) 208, 665, 929, 1181, 1404, 1469, 1489, 1681
AhlI ACTAGT 1 cut(s) 545
AjnI CCWGG 2 cut(s) 739, 1608
AluBI AGCT 7 cut(s) 519, 611, 661, 707, 719, 794, 1139
AluI AGCT 7 cut(s) 519, 611, 661, 707, 719, 794, 1139
Alw21I GWGCWC 4 cut(s) 386, 521, 1024, 1330
Alw26I GTCTC 2 cut(s) 1022, 1571
AlwI GGATC 3 cut(s) 443, 1405, 1408
AlwNI CAGNNNCTG 1 cut(s) 316
Ama87I CYCGRG 2 cut(s) 628, 1167
ApaI GGGCCC 1 cut(s) 419
ApeKI GCWGC 5 cut(s) 316, 341, 833, 836, 845
ApoI RAATTY 3 cut(s) 1574, 1618, 1627
ArsI GACNNNNNNTTYG 2 cut(s) 552, 584
AspLEI GCGC 2 cut(s) 380, 428
AsuC2I CCSGG 3 cut(s) 423, 695, 934
AsuHPI GGTGA 4 cut(s) 92, 111, 262, 755
AvaI CYCGRG 2 cut(s) 628, 1167
AvaII GGWCC 5 cut(s) 357, 452, 577, 781, 1161
BaeGI GKGCMC 1 cut(s) 419
BanII GRGCYC 2 cut(s) 419, 521
BbrPI CACGTG 1 cut(s) 644
BbsI GAAGAC 1 cut(s) 1356
Bbv12I GWGCWC 4 cut(s) 386, 521, 1024, 1330
BbvI GCAGC 5 cut(s) 303, 353, 820, 848, 857
BccI CCATC 2 cut(s) 1328, 1520
BceAI ACGGC 6 cut(s) 446, 452, 517, 580, 601, 1068
BcgI CGANNNNNNTGC 2 cut(s) 577, 611
BciT130I CCWGG 2 cut(s) 741, 1610
BcnI CCSGG 3 cut(s) 423, 695, 934
BcoDI GTCTC 2 cut(s) 1022, 1571
BcuI ACTAGT 1 cut(s) 545
BfaI CTAG 3 cut(s) 38, 546, 1025
BfmI CTRYAG 3 cut(s) 834, 1140, 1581
BglI GCCNNNNNGGC 1 cut(s) 423
BlpI GCTNAGC 1 cut(s) 528
Bme1390I CCNGG 5 cut(s) 423, 695, 741, 934, 1610
Bme18I GGWCC 5 cut(s) 357, 452, 577, 781, 1161
BmeT110I CYCGRG 2 cut(s) 628, 1167
BmiI GGNNCC 8 cut(s) 358, 359, 416, 417, 579, 627, 738, 1162
BmrFI CCNGG 5 cut(s) 423, 695, 741, 934, 1610
BmrI ACTGGG 1 cut(s) 363
BmsI GCATC 4 cut(s) 832, 945, 1242, 1454
BmuI ACTGGG 1 cut(s) 363
BpiI GAAGAC 1 cut(s) 1356
BpmI CTGGAG 2 cut(s) 741, 1360
Bpu1102I GCTNAGC 1 cut(s) 528
BpuEI CTTGAG 2 cut(s) 663, 774
BpuMI CCSGG 3 cut(s) 423, 695, 934
BsaAI YACGTR 1 cut(s) 644
BsaHI GRCGYC 2 cut(s) 404, 567
BsaI GGTCTC 1 cut(s) 1571
BsaJI CCNNGG 4 cut(s) 462, 533, 670, 879
BsaWI WCCGGW 1 cut(s) 449
Bsc4I CCNNNNNNNGG 3 cut(s) 289, 1094, 1537
Bse1I ACTGG 5 cut(s) 358, 855, 1185, 1399, 1522
Bse3DI GCAATG 1 cut(s) 595
BseBI CCWGG 2 cut(s) 741, 1610
BseDI CCNNGG 4 cut(s) 462, 533, 670, 879
BseGI GGATG 1 cut(s) 1177
BseLI CCNNNNNNNGG 3 cut(s) 289, 1094, 1537
BseMI GCAATG 1 cut(s) 595
BseMII CTCAG 4 cut(s) 40, 519, 715, 1122
BseNI ACTGG 5 cut(s) 358, 855, 1185, 1399, 1522
BseRI GAGGAG 3 cut(s) 172, 206, 1100
BseSI GKGCMC 1 cut(s) 419
BseX3I CGGCCG 1 cut(s) 475
BseXI GCAGC 5 cut(s) 303, 353, 820, 848, 857
BseYI CCCAGC 2 cut(s) 360, 1157
Bsh1236I CGCG 5 cut(s) 290, 380, 428, 480, 857
Bsh1285I CGRYCG 1 cut(s) 478
BsiEI CGRYCG 1 cut(s) 478
BsiHKAI GWGCWC 4 cut(s) 386, 521, 1024, 1330
BsiHKCI CYCGRG 2 cut(s) 628, 1167
BsiSI CCGG 4 cut(s) 423, 450, 694, 934
BslFI GGGAC 3 cut(s) 343, 688, 1174
BslI CCNNNNNNNGG 3 cut(s) 289, 1094, 1537
BsmAI GTCTC 2 cut(s) 1022, 1571
BsmFI GGGAC 3 cut(s) 343, 688, 1174
Bso31I GGTCTC 1 cut(s) 1571
BsoBI CYCGRG 2 cut(s) 628, 1167
Bsp120I GGGCCC 1 cut(s) 415
Bsp1286I GDGCHC 5 cut(s) 386, 419, 521, 1024, 1330
Bsp1407I TGTACA 1 cut(s) 17
Bsp143I GATC 5 cut(s) 435, 555, 632, 1397, 1413
Bsp1720I GCTNAGC 1 cut(s) 528
Bsp19I CCATGG 2 cut(s) 670, 879
BspCNI CTCAG 4 cut(s) 39, 520, 714, 1123
BspFNI CGCG 5 cut(s) 290, 380, 428, 480, 857
BspLI GGNNCC 8 cut(s) 358, 359, 416, 417, 579, 627, 738, 1162
BspMAI CTGCAG 2 cut(s) 838, 1585
BspPI GGATC 3 cut(s) 443, 1405, 1408
BspQI GCTCTTC 1 cut(s) 503
BspTNI GGTCTC 1 cut(s) 1571
BsrBI CCGCTC 1 cut(s) 1462
BsrDI GCAATG 1 cut(s) 595
BsrGI TGTACA 1 cut(s) 17
BsrI ACTGG 5 cut(s) 358, 855, 1185, 1399, 1522
BssECI CCNNGG 4 cut(s) 462, 533, 670, 879
BssMI GATC 5 cut(s) 435, 555, 632, 1397, 1413
BssNI GRCGYC 2 cut(s) 404, 567
BssT1I CCWWGG 2 cut(s) 670, 879
Bst2UI CCWGG 2 cut(s) 741, 1610
Bst4CI ACNGT 3 cut(s) 1195, 1603, 1660
Bst6I CTCTTC 3 cut(s) 75, 283, 503
BstACI GRCGYC 2 cut(s) 404, 567
BstAPI GCANNNNNTGC 3 cut(s) 731, 842, 1325
BstAUI TGTACA 1 cut(s) 17
BstBAI YACGTR 1 cut(s) 644
BstC8I GCNNGC 5 cut(s) 339, 382, 732, 759, 1231
BstDEI CTNAG 4 cut(s) 26, 528, 701, 1131
BstDSI CCRYGG 4 cut(s) 462, 533, 670, 879
BstF5I GGATG 1 cut(s) 1177
BstFNI CGCG 5 cut(s) 290, 380, 428, 480, 857
BstHHI GCGC 2 cut(s) 380, 428
BstKTI GATC 5 cut(s) 438, 558, 635, 1400, 1416
BstMAI GTCTC 2 cut(s) 1022, 1571
BstMBI GATC 5 cut(s) 435, 555, 632, 1397, 1413
BstMCI CGRYCG 1 cut(s) 478
BstMWI GCNNNNNNNGC 8 cut(s) 423, 731, 842, 845, 851, 854, 1298, 1325
BstNI CCWGG 2 cut(s) 741, 1610
BstSCI CCNGG 5 cut(s) 421, 693, 739, 932, 1608
BstSFI CTRYAG 3 cut(s) 834, 1140, 1581
BstSLI GKGCMC 1 cut(s) 419
BstUI CGCG 5 cut(s) 290, 380, 428, 480, 857
BstV1I GCAGC 5 cut(s) 303, 353, 820, 848, 857
BstV2I GAAGAC 1 cut(s) 1356
BstX2I RGATCY 1 cut(s) 1397
BstXI CCANNNNNNTGG 1 cut(s) 829
BstYI RGATCY 1 cut(s) 1397
BstZI CGGCCG 1 cut(s) 475
BtgI CCRYGG 4 cut(s) 462, 533, 670, 879
BtsCI GGATG 1 cut(s) 1177
BtsI GCAGTG 1 cut(s) 259
BtsIMutI CAGTG 4 cut(s) 259, 848, 908, 1515
Cac8I GCNNGC 5 cut(s) 339, 382, 732, 759, 1231
CaiI CAGNNNCTG 1 cut(s) 316
CfoI GCGC 2 cut(s) 380, 428
CpoI CGGWCCG 1 cut(s) 452
CseI GACGC 2 cut(s) 322, 556
CsiI ACCWGGT 2 cut(s) 739, 1608
Csp6I GTAC 2 cut(s) 18, 1656
CspI CGGWCCG 1 cut(s) 452
CviAII CATG 5 cut(s) 551, 671, 880, 1000, 1119
CviQI GTAC 2 cut(s) 18, 1656
DdeI CTNAG 4 cut(s) 26, 528, 701, 1131
DpnI GATC 5 cut(s) 437, 557, 634, 1399, 1415
DpnII GATC 5 cut(s) 435, 555, 632, 1397, 1413
DrdI GACNNNNNNGTC 1 cut(s) 546
DseDI GACNNNNNNGTC 1 cut(s) 546
EaeI YGGCCR 5 cut(s) 465, 475, 772, 819, 852
EagI CGGCCG 1 cut(s) 475
Eam1104I CTCTTC 3 cut(s) 75, 283, 503
EarI CTCTTC 3 cut(s) 75, 283, 503
EciI GGCGGA 2 cut(s) 215, 448
Ecl136II GAGCTC 1 cut(s) 519
EclXI CGGCCG 1 cut(s) 475
Eco130I CCWWGG 2 cut(s) 670, 879
Eco147I AGGCCT 1 cut(s) 154
Eco24I GRGCYC 2 cut(s) 419, 521
Eco31I GGTCTC 1 cut(s) 1571
Eco32I GATATC 1 cut(s) 970
Eco47I GGWCC 5 cut(s) 357, 452, 577, 781, 1161
Eco52I CGGCCG 1 cut(s) 475
Eco53kI GAGCTC 1 cut(s) 519
Eco57I CTGAAG 1 cut(s) 1302
Eco72I CACGTG 1 cut(s) 644
Eco88I CYCGRG 2 cut(s) 628, 1167
EcoICRI GAGCTC 1 cut(s) 519
EcoO109I RGGNCCY 2 cut(s) 357, 415
EcoRI GAATTC 1 cut(s) 1618
EcoRII CCWGG 2 cut(s) 739, 1608
EcoRV GATATC 1 cut(s) 970
EcoT14I CCWWGG 2 cut(s) 670, 879
EcoT22I ATGCAT 1 cut(s) 1120
EcoT38I GRGCYC 2 cut(s) 419, 521
ErhI CCWWGG 2 cut(s) 670, 879
FaeI CATG 5 cut(s) 554, 674, 883, 1003, 1122
FalI AAGNNNNNCTT 2 cut(s) 1484, 1516
FaqI GGGAC 3 cut(s) 343, 688, 1174
FatI CATG 5 cut(s) 550, 670, 879, 999, 1118
FauI CCCGC 1 cut(s) 1455
FblI GTMKAC 1 cut(s) 597
FokI GGATG 1 cut(s) 1184
FriOI GRGCYC 2 cut(s) 419, 521
FspBI CTAG 3 cut(s) 38, 546, 1025
GlaI GCGC 2 cut(s) 379, 427
GsaI CCCAGC 2 cut(s) 364, 1161
GsuI CTGGAG 2 cut(s) 741, 1360
HapII CCGG 4 cut(s) 423, 450, 694, 934
HgaI GACGC 2 cut(s) 322, 556
HhaI GCGC 2 cut(s) 380, 428
Hin1I GRCGYC 2 cut(s) 404, 567
Hin1II CATG 5 cut(s) 554, 674, 883, 1003, 1122
Hin6I GCGC 2 cut(s) 378, 426
HinP1I GCGC 2 cut(s) 378, 426
HincII GTYRAC 2 cut(s) 598, 805
HindII GTYRAC 2 cut(s) 598, 805
HinfI GANTC 9 cut(s) 293, 676, 787, 859, 1342, 1352, 1371, 1527, 1588
HpaII CCGG 4 cut(s) 423, 450, 694, 934
HphI GGTGA 4 cut(s) 92, 111, 262, 755
Hpy166II GTNNAC 7 cut(s) 20, 45, 598, 750, 805, 1599, 1606
Hpy188I TCNGA 8 cut(s) 298, 373, 492, 690, 704, 1282, 1357, 1450
Hpy188III TCNNGA 8 cut(s) 1025, 1059, 1169, 1220, 1331, 1346, 1364, 1501
Hpy8I GTNNAC 7 cut(s) 20, 45, 598, 750, 805, 1599, 1606
Hpy99I CGWCG 5 cut(s) 473, 476, 572, 599, 602
HpyAV CCTTC 6 cut(s) 144, 214, 277, 1226, 1537, 1587
HpyCH4III ACNGT 3 cut(s) 1195, 1603, 1660
HpyCH4IV ACGT 2 cut(s) 404, 643
HpyCH4V TGCA 7 cut(s) 836, 845, 906, 1054, 1118, 1445, 1583
HpyF10VI GCNNNNNNNGC 8 cut(s) 423, 731, 842, 845, 851, 854, 1298, 1325
HpyF3I CTNAG 4 cut(s) 26, 528, 701, 1131
HpySE526I ACGT 2 cut(s) 404, 643
Hsp92I GRCGYC 2 cut(s) 404, 567
Hsp92II CATG 5 cut(s) 554, 674, 883, 1003, 1122
HspAI GCGC 2 cut(s) 378, 426
KflI GGGWCCC 1 cut(s) 357
Kzo9I GATC 5 cut(s) 435, 555, 632, 1397, 1413
LguI GCTCTTC 1 cut(s) 503
LmnI GCTCC 6 cut(s) 239, 269, 658, 722, 1122, 1459
Lsp1109I GCAGC 5 cut(s) 303, 353, 820, 848, 857
LweI GCATC 4 cut(s) 832, 945, 1242, 1454
MabI ACCWGGT 2 cut(s) 739, 1608
MaeI CTAG 3 cut(s) 38, 546, 1025
MaeII ACGT 2 cut(s) 404, 643
MaeIII GTNAC 7 cut(s) 80, 349, 400, 1002, 1144, 1210, 1694
MalI GATC 5 cut(s) 437, 557, 634, 1399, 1415
MbiI CCGCTC 1 cut(s) 1462
MboI GATC 5 cut(s) 435, 555, 632, 1397, 1413
MboII GAAGA 9 cut(s) 62, 183, 186, 270, 520, 659, 867, 1361, 1392
MfeI CAATTG 1 cut(s) 1287
MflI RGATCY 1 cut(s) 1397
MhlI GDGCHC 5 cut(s) 386, 419, 521, 1024, 1330
MluCI AATT 9 cut(s) 924, 1036, 1074, 1263, 1287, 1422, 1574, 1618, 1627
MlyI GAGTC 6 cut(s) 287, 670, 781, 1346, 1351, 1597
MmeI TCCRAC 2 cut(s) 321, 351
Mph1103I ATGCAT 1 cut(s) 1120
MseI TTAA 4 cut(s) 8, 162, 1425, 1625
MslI CAYNNNNRTG 1 cut(s) 1313
MspA1I CMGCKG 1 cut(s) 1247
MspI CCGG 4 cut(s) 423, 450, 694, 934
MspR9I CCNGG 5 cut(s) 423, 695, 741, 934, 1610
MunI CAATTG 1 cut(s) 1287
MvaI CCWGG 2 cut(s) 741, 1610
MvnI CGCG 5 cut(s) 290, 380, 428, 480, 857
MwoI GCNNNNNNNGC 8 cut(s) 423, 731, 842, 845, 851, 854, 1298, 1325
NciI CCSGG 3 cut(s) 423, 695, 934
NcoI CCATGG 2 cut(s) 670, 879
NdeII GATC 5 cut(s) 435, 555, 632, 1397, 1413
NlaIII CATG 5 cut(s) 554, 674, 883, 1003, 1122
NlaIV GGNNCC 8 cut(s) 358, 359, 416, 417, 579, 627, 738, 1162
NmeAIII GCCGAG 2 cut(s) 54, 303
NmuCI GTSAC 4 cut(s) 80, 349, 400, 1002
NsiI ATGCAT 1 cut(s) 1120
PceI AGGCCT 1 cut(s) 154
PciSI GCTCTTC 1 cut(s) 503
PcsI WCGNNNNNNNCGW 6 cut(s) 294, 330, 377, 477, 564, 591
PfeI GAWTC 3 cut(s) 859, 1371, 1527
PflFI GACNNNGTC 1 cut(s) 355
PflMI CCANNNNNTGG 2 cut(s) 1094, 1537
PleI GAGTC 6 cut(s) 287, 670, 781, 1346, 1350, 1596
PmaCI CACGTG 1 cut(s) 644
PmlI CACGTG 1 cut(s) 644
PpsI GAGTC 6 cut(s) 287, 670, 781, 1346, 1350, 1596
Ppu21I YACGTR 1 cut(s) 644
PpuMI RGGWCCY 1 cut(s) 357
Psp124BI GAGCTC 1 cut(s) 521
Psp5II RGGWCCY 1 cut(s) 357
Psp6I CCWGG 2 cut(s) 739, 1608
PspCI CACGTG 1 cut(s) 644
PspFI CCCAGC 2 cut(s) 360, 1157
PspGI CCWGG 2 cut(s) 739, 1608
PspN4I GGNNCC 8 cut(s) 358, 359, 416, 417, 579, 627, 738, 1162
PspOMI GGGCCC 1 cut(s) 415
PspPPI RGGWCCY 1 cut(s) 357
PstI CTGCAG 2 cut(s) 838, 1585
PstNI CAGNNNCTG 1 cut(s) 316
PsuI RGATCY 1 cut(s) 1397
PsyI GACNNNGTC 1 cut(s) 355
RsaI GTAC 2 cut(s) 19, 1657
RsaNI GTAC 2 cut(s) 18, 1656
RseI CAYNNNNRTG 1 cut(s) 1313
Rsr2I CGGWCCG 1 cut(s) 452
RsrII CGGWCCG 1 cut(s) 452
SacI GAGCTC 1 cut(s) 521
SalI GTCGAC 1 cut(s) 596
SapI GCTCTTC 1 cut(s) 503
SaqAI TTAA 4 cut(s) 8, 162, 1425, 1625
Sau3AI GATC 5 cut(s) 435, 555, 632, 1397, 1413
SbfI CCTGCAGG 1 cut(s) 1585
SchI GAGTC 6 cut(s) 287, 670, 781, 1346, 1351, 1597
ScrFI CCNGG 5 cut(s) 423, 695, 741, 934, 1610
SdaI CCTGCAGG 1 cut(s) 1585
SduI GDGCHC 5 cut(s) 386, 419, 521, 1024, 1330
SexAI ACCWGGT 2 cut(s) 739, 1608
SfaNI GCATC 4 cut(s) 832, 945, 1242, 1454
SfcI CTRYAG 3 cut(s) 834, 1140, 1581
SgrDI CGTCGACG 1 cut(s) 596
SinI GGWCC 5 cut(s) 357, 452, 577, 781, 1161
SmiMI CAYNNNNRTG 1 cut(s) 1313
SmlI CTYRAG 2 cut(s) 678, 789
SmoI CTYRAG 2 cut(s) 678, 789
SpeI ACTAGT 1 cut(s) 545
Sse8387I CCTGCAGG 1 cut(s) 1585
Sse9I AATT 9 cut(s) 924, 1036, 1074, 1263, 1287, 1422, 1574, 1618, 1627
SseBI AGGCCT 1 cut(s) 154
SspI AATATT 1 cut(s) 1551
SspMI CTAG 3 cut(s) 38, 546, 1025
SstI GAGCTC 1 cut(s) 521
StuI AGGCCT 1 cut(s) 154
StyD4I CCNGG 5 cut(s) 421, 693, 739, 932, 1608
StyI CCWWGG 2 cut(s) 670, 879
TaaI ACNGT 3 cut(s) 1195, 1603, 1660
TaiI ACGT 2 cut(s) 407, 646
TaqI TCGA 4 cut(s) 558, 597, 1391, 1591
TasI AATT 9 cut(s) 924, 1036, 1074, 1263, 1287, 1422, 1574, 1618, 1627
TatI WGTACW 1 cut(s) 17
TauI GCSGC 6 cut(s) 367, 395, 445, 480, 777, 857
TfiI GAWTC 3 cut(s) 859, 1371, 1527
Tru1I TTAA 4 cut(s) 8, 162, 1425, 1625
Tru9I TTAA 4 cut(s) 8, 162, 1425, 1625
TscAI CASTG 4 cut(s) 266, 855, 908, 1522
TseFI GTSAC 4 cut(s) 80, 349, 400, 1002
TseI GCWGC 5 cut(s) 316, 341, 833, 836, 845
Tsp45I GTSAC 4 cut(s) 80, 349, 400, 1002
TspDTI ATGAA 1 cut(s) 990
TspGWI ACGGA 2 cut(s) 444, 476
TspRI CASTG 4 cut(s) 266, 855, 908, 1522
Tth111I GACNNNGTC 1 cut(s) 355
Van91I CCANNNNNTGG 2 cut(s) 1094, 1537
VpaK11BI GGWCC 5 cut(s) 357, 452, 577, 781, 1161
XapI RAATTY 3 cut(s) 1574, 1618, 1627
XbaI TCTAGA 1 cut(s) 1024
XcmI CCANNNNNNNNNTGG 1 cut(s) 1171
XmiI GTMKAC 1 cut(s) 597
XspI CTAG 3 cut(s) 38, 546, 1025
ZraI GACGTC 1 cut(s) 405
Zsp2I ATGCAT 1 cut(s) 1120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.