Rh7CG502400
ERF Family

Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0012258
Physical Location & Seq
Reverse (-)
67971866 .. 67976305
4440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG502400.1

Sequence Viewer

Length: 1809 bp
ATGGGTTTAAGCCTTTGTACACTTCTCAGGCCCAGACTAGCGTTTACTGATAAACAAAGATACACAACCCTTCTCGGCGGTGACAGAAAATCAAAAACATCTATGGCCTCTCTGCTCTCACCTCTCCGCTTTCGCCATTTTCTTTACACAAGGCCTAAACTGAAACCCCCTTATCCACTCTCCTCCATACCTTCTTCCGCTTCCTTCAAACCCCTTCTCAAACTCCGCCCTCGCTTCCCTCCCTATTTACACTCCTGCCACTGCTCCCTCACCGCCTCTTCCCCACTCGCAGACTCCGACTACAAAACCCAGACGCTGCTTCTCGGCAAAGACGAGCGAGCTGCAGCGCGTGGGTCCCAGCCCCAGCCGCAGCCGGAGAGCGCTAGCACAATCGCGGCCATTGTGACGTCAGTTGGGGGCCCACCCGGCGCGGTTGGGATCGTGCGGCTGTCCGGTCCGTCCGCGGTGGCCGTCGTCGGCCGCGTGTTCCGTCCGAGCAAGAAAAAGAGGAAGAGCAAGAGCTCTGGTGCTGAGCCATGGCGACCCACTAGTCATGTAATCGAATACGGCGTCGTTTTGGACCCCAACGGCAATGTCGTCGACGAGGTTTTAGCTGTGCCAATGTTGGCCCCAAGATCATATACACGTGAAGATGTGGTGGAGCTTCAATGCCATGGGACTCAAGTGTGTTTGAACCGGGTTCTAAGAGCTTGTTTAGAAGCTGGAGCAAGGCTTGCGGAACCAGGGGAGTTTACTCTGCGTGCCTTTCTCAATGGCCGCTTGGACCTGACCCAAGCTGAAAATGTTGATAAACTCATTTCGGCCAAGTCTGTGGCTGCAGCAGATGCAGCACTAGCCGCAATTCAGGGTGGCTTTTCTTCCATGGTAAAATCTGTAAGATTTCAGTGCATTGAGTTGCTTACTGAAATTGAAGCCCGGTTAGATTTTGATGATGAGATGCCGCCGCTTGATACCAATGAAGTTGTGAATAAGATACATTCCATGTCACAAGATGTTGAGAGTGCTCTAGAGACGGCCAATTATGACCAACTTCTGCAATCTGGATTACAGATAGCAATTCTGGGCCGTCCAAATGTTGGGAAATCAAGCCTCCTCAATGCATGGAGCAAAACTGAGAGAGCTATAGTTACAGAAGTTGCTGGGACCACTCGGGATGTGGTTGAAGCCAGTATTACAGTTAATGGTATTCCTGTAACCCTTCTTGATACAGCAGGCATTAGGGAAACCACTGACATAGTGGAGAAAATTGGTGTGGAGAGGTCTGAAGCAGTTGCTATGGGTGCTGATGTCATTATTATGGCAATAAGTGCTCTTGATGGCTGGAGTCCAGAAGACTCTGAACTTCTTGACAGAATCCAATCTAACAAGAAATCGACTGGATCTTCAACCCCAATGATCCTTGTAATTAACAAAATAGATTGTGTTGCATCTGATTGCTTGGAGCGGGTTCAAAAAAATGTCGGTTCTTTCAATAAGCATGTCTTGACATCTGCCATCACTGGTCAAGGAATCCAAGATTTGGAGAAGGCAATATTAGATATTGTTGGTCTCAACAAATTTCCTGCAGGGAGTCGAAGGTGGACTGTGAACCAGAGACAATGCGAGCAGCTTGTCCGAACCAAAGAGGCTCTTGCAAGGTTGAAATCCTCTATAGAGGAGGAAATTCCTTTTGACTTCTGGACAATTGATTTGAGGGAAGCTGCAATGGCCCTTGGCCAAATAAGTGGAGAAGACATTTCGGAGGAGGTTTTGACCAATATTTTTGGCAAGTTCTGCATTGGTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMR_HSR1 MnmE_helical TrmE_N

Protein Analysis

602

Amino Acids

65.32

Weight (kDa)

7.51

Isoelectric Point (pI)

43.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TrmE_N PF10396 130 - 260 3.8e-37 GTP-binding protein TrmE N-terminus
MnmE_helical PF12631 263 - 599 2.1e-49 MnmE helical domain
MMR_HSR1 PF01926 357 - 478 1.7e-24 50S ribosome-binding GTPase
FeoB_N PF02421 357 - 518 1.5e-08 Ferrous iron transport protein B
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012258)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78010
fragaria_vesca FvH4_5g38010 FvH4_5g38010
malus_domestica MD08G1177300.v1.1 MD15G1355000.v1.1
prunus_persica Prupe.1G511900_v2.0.a1
pyrus_communis pycom08g15220
rosa_chinensis RchiOBHm_Chr7g0239951
rosa_laevigata RLG00000000715
rosa_multiflora Rmu_sc0000540.1_g000022 Rmu_sc0006825.1_g000001 Rmu_sc0035965.1_g000001
rosa_roxburghii Rroxscaffold_3G00220600
rosa_rugosa Rorug07G0331400
rosa_samantha Rh7AG485100 Rh7BG458100 Rh7CG502400 Rh7DG470700
rosa_wichuraiana Rw7G040690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 549
AatII GACGTC 1 cut(s) 410
AccB7I CCANNNNNTGG 2 cut(s) 1097, 1540
AccBSI CCGCTC 1 cut(s) 1465
AccI GTMKAC 1 cut(s) 600
AccII CGCG 5 cut(s) 349, 395, 431, 464, 483
AclWI GGATC 3 cut(s) 446, 1408, 1411
AcoI YGGCCR 7 cut(s) 396, 468, 478, 775, 822, 1035, 1735
AcsI RAATTY 2 cut(s) 1577, 1683
AcuI CTGAAG 1 cut(s) 1305
AcvI CACGTG 1 cut(s) 647
AcyI GRCGYC 2 cut(s) 407, 570
AfaI GTAC 1 cut(s) 19
AfeI AGCGCT 1 cut(s) 382
AfiI CCNNNNNNNGG 2 cut(s) 1097, 1540
AflIII ACRYGT 1 cut(s) 644
AgsI TTSAA 9 cut(s) 208, 668, 694, 932, 1184, 1407, 1472, 1492, 1663
AhlI ACTAGT 1 cut(s) 548
AjnI CCWGG 1 cut(s) 742
Alw21I GWGCWC 3 cut(s) 524, 1027, 1333
Alw26I GTCTC 3 cut(s) 1025, 1574, 1609
AlwI GGATC 3 cut(s) 446, 1408, 1411
AlwNI CAGNNNCTG 1 cut(s) 316
Ama87I CYCGRG 1 cut(s) 1170
Aor51HI AGCGCT 1 cut(s) 382
ApaI GGGCCC 1 cut(s) 422
ApeKI GCWGC 9 cut(s) 316, 341, 344, 370, 836, 839, 848, 1627, 1721
ApoI RAATTY 2 cut(s) 1577, 1683
ArsI GACNNNNNNTTYG 4 cut(s) 555, 587, 1693, 1725
AspLEI GCGC 3 cut(s) 349, 383, 431
AsuC2I CCSGG 3 cut(s) 426, 698, 937
AsuHPI GGTGA 3 cut(s) 92, 111, 262
AsuNHI GCTAGC 1 cut(s) 383
AvaI CYCGRG 1 cut(s) 1170
AvaII GGWCC 5 cut(s) 354, 455, 580, 784, 1164
BaeGI GKGCMC 1 cut(s) 422
BalI TGGCCA 1 cut(s) 1737
BanII GRGCYC 2 cut(s) 422, 524
BbrPI CACGTG 1 cut(s) 647
BbsI GAAGAC 2 cut(s) 1359, 1758
Bbv12I GWGCWC 3 cut(s) 524, 1027, 1333
BbvI GCAGC 9 cut(s) 303, 328, 356, 382, 823, 851, 860, 1639, 1708
BccI CCATC 2 cut(s) 1331, 1523
BceAI ACGGC 5 cut(s) 455, 583, 604, 1050, 1071
BcgI CGANNNNNNTGC 4 cut(s) 323, 357, 580, 614
BciT130I CCWGG 1 cut(s) 744
BcnI CCSGG 3 cut(s) 426, 698, 937
BcoDI GTCTC 3 cut(s) 1025, 1574, 1609
BcuI ACTAGT 1 cut(s) 548
BfaI CTAG 5 cut(s) 38, 384, 549, 854, 1028
BfmI CTRYAG 5 cut(s) 342, 837, 1143, 1584, 1671
BfoI RGCGCY 1 cut(s) 384
BglI GCCNNNNNGGC 1 cut(s) 426
BlpI GCTNAGC 1 cut(s) 531
Bme1390I CCNGG 4 cut(s) 426, 698, 744, 937
Bme18I GGWCC 5 cut(s) 354, 455, 580, 784, 1164
BmeT110I CYCGRG 1 cut(s) 1170
BmiI GGNNCC 8 cut(s) 355, 356, 419, 420, 582, 630, 741, 1165
BmrFI CCNGG 4 cut(s) 426, 698, 744, 937
BmsI GCATC 3 cut(s) 835, 948, 1457
BmtI GCTAGC 1 cut(s) 387
BpiI GAAGAC 2 cut(s) 1359, 1758
BpmI CTGGAG 2 cut(s) 744, 1363
Bpu1102I GCTNAGC 1 cut(s) 531
BpuEI CTTGAG 1 cut(s) 666
BpuMI CCSGG 3 cut(s) 426, 698, 937
BsaAI YACGTR 1 cut(s) 647
BsaHI GRCGYC 2 cut(s) 407, 570
BsaI GGTCTC 1 cut(s) 1574
BsaJI CCNNGG 6 cut(s) 462, 536, 673, 743, 882, 1732
BsaWI WCCGGW 1 cut(s) 452
Bsc4I CCNNNNNNNGG 2 cut(s) 1097, 1540
Bse1I ACTGG 3 cut(s) 1188, 1402, 1525
Bse3DI GCAATG 2 cut(s) 598, 1731
BseBI CCWGG 1 cut(s) 744
BseDI CCNNGG 6 cut(s) 462, 536, 673, 743, 882, 1732
BseGI GGATG 1 cut(s) 1180
BseLI CCNNNNNNNGG 2 cut(s) 1097, 1540
BseMI GCAATG 2 cut(s) 598, 1731
BseMII CTCAG 3 cut(s) 40, 522, 1125
BseNI ACTGG 3 cut(s) 1188, 1402, 1525
BseRI GAGGAG 4 cut(s) 172, 1103, 1691, 1778
BseSI GKGCMC 1 cut(s) 422
BseX3I CGGCCG 1 cut(s) 478
BseXI GCAGC 9 cut(s) 303, 328, 356, 382, 823, 851, 860, 1639, 1708
BseYI CCCAGC 3 cut(s) 357, 363, 1160
Bsh1236I CGCG 5 cut(s) 349, 395, 431, 464, 483
Bsh1285I CGRYCG 1 cut(s) 481
BsiEI CGRYCG 1 cut(s) 481
BsiHKAI GWGCWC 3 cut(s) 524, 1027, 1333
BsiHKCI CYCGRG 1 cut(s) 1170
BsiSI CCGG 5 cut(s) 374, 426, 453, 697, 937
BslFI GGGAC 3 cut(s) 340, 691, 1177
BslI CCNNNNNNNGG 2 cut(s) 1097, 1540
BsmAI GTCTC 3 cut(s) 1025, 1574, 1609
BsmBI CGTCTC 1 cut(s) 1025
BsmFI GGGAC 3 cut(s) 340, 691, 1177
Bso31I GGTCTC 1 cut(s) 1574
BsoBI CYCGRG 1 cut(s) 1170
Bsp120I GGGCCC 1 cut(s) 418
Bsp1286I GDGCHC 4 cut(s) 422, 524, 1027, 1333
Bsp1407I TGTACA 1 cut(s) 17
Bsp143I GATC 4 cut(s) 438, 635, 1400, 1416
Bsp1720I GCTNAGC 1 cut(s) 531
Bsp19I CCATGG 3 cut(s) 536, 673, 882
BspCNI CTCAG 3 cut(s) 39, 523, 1126
BspFNI CGCG 5 cut(s) 349, 395, 431, 464, 483
BspLI GGNNCC 8 cut(s) 355, 356, 419, 420, 582, 630, 741, 1165
BspMAI CTGCAG 3 cut(s) 346, 841, 1588
BspOI GCTAGC 1 cut(s) 387
BspPI GGATC 3 cut(s) 446, 1408, 1411
BspQI GCTCTTC 1 cut(s) 506
BspTNI GGTCTC 1 cut(s) 1574
BsrBI CCGCTC 1 cut(s) 1465
BsrDI GCAATG 2 cut(s) 598, 1731
BsrGI TGTACA 1 cut(s) 17
BsrI ACTGG 3 cut(s) 1188, 1402, 1525
BssECI CCNNGG 6 cut(s) 462, 536, 673, 743, 882, 1732
BssMI GATC 4 cut(s) 438, 635, 1400, 1416
BssNI GRCGYC 2 cut(s) 407, 570
BssT1I CCWWGG 4 cut(s) 536, 673, 882, 1732
Bst2UI CCWGG 1 cut(s) 744
Bst4CI ACNGT 2 cut(s) 1198, 1606
Bst6I CTCTTC 2 cut(s) 283, 506
BstACI GRCGYC 2 cut(s) 407, 570
BstAPI GCANNNNNTGC 4 cut(s) 734, 845, 1328, 1794
BstAUI TGTACA 1 cut(s) 17
BstBAI YACGTR 1 cut(s) 647
BstC8I GCNNGC 6 cut(s) 339, 385, 735, 762, 1234, 1625
BstDEI CTNAG 4 cut(s) 26, 531, 704, 1134
BstDSI CCRYGG 4 cut(s) 462, 536, 673, 882
BstF5I GGATG 1 cut(s) 1180
BstFNI CGCG 5 cut(s) 349, 395, 431, 464, 483
BstH2I RGCGCY 1 cut(s) 384
BstHHI GCGC 3 cut(s) 349, 383, 431
BstKTI GATC 4 cut(s) 441, 638, 1403, 1419
BstMAI GTCTC 3 cut(s) 1025, 1574, 1609
BstMBI GATC 4 cut(s) 438, 635, 1400, 1416
BstMCI CGRYCG 1 cut(s) 481
BstNI CCWGG 1 cut(s) 744
BstNSI RCATGY 1 cut(s) 1502
BstSCI CCNGG 4 cut(s) 424, 696, 742, 935
BstSFI CTRYAG 5 cut(s) 342, 837, 1143, 1584, 1671
BstSLI GKGCMC 1 cut(s) 422
BstUI CGCG 5 cut(s) 349, 395, 431, 464, 483
BstV1I GCAGC 9 cut(s) 303, 328, 356, 382, 823, 851, 860, 1639, 1708
BstV2I GAAGAC 2 cut(s) 1359, 1758
BstX2I RGATCY 1 cut(s) 1400
BstXI CCANNNNNNTGG 2 cut(s) 832, 1745
BstYI RGATCY 1 cut(s) 1400
BstZI CGGCCG 1 cut(s) 478
BtgI CCRYGG 4 cut(s) 462, 536, 673, 882
BtsCI GGATG 1 cut(s) 1180
BtsI GCAGTG 1 cut(s) 259
BtsIMutI CAGTG 4 cut(s) 259, 911, 1248, 1518
Cac8I GCNNGC 6 cut(s) 339, 385, 735, 762, 1234, 1625
CaiI CAGNNNCTG 1 cut(s) 316
CfoI GCGC 3 cut(s) 349, 383, 431
Cfr42I CCGCGG 1 cut(s) 465
CpoI CGGWCCG 1 cut(s) 455
CseI GACGC 2 cut(s) 322, 559
Csp6I GTAC 1 cut(s) 18
CspI CGGWCCG 1 cut(s) 455
CviAII CATG 7 cut(s) 537, 554, 674, 883, 1003, 1122, 1499
CviQI GTAC 1 cut(s) 18
DdeI CTNAG 4 cut(s) 26, 531, 704, 1134
DpnI GATC 4 cut(s) 440, 637, 1402, 1418
DpnII GATC 4 cut(s) 438, 635, 1400, 1416
DrdI GACNNNNNNGTC 1 cut(s) 549
DseDI GACNNNNNNGTC 1 cut(s) 549
EaeI YGGCCR 7 cut(s) 396, 468, 478, 775, 822, 1035, 1735
EagI CGGCCG 1 cut(s) 478
Eam1104I CTCTTC 2 cut(s) 283, 506
EarI CTCTTC 2 cut(s) 283, 506
EciI GGCGGA 1 cut(s) 215
Ecl136II GAGCTC 1 cut(s) 522
EclXI CGGCCG 1 cut(s) 478
Eco130I CCWWGG 4 cut(s) 536, 673, 882, 1732
Eco147I AGGCCT 1 cut(s) 154
Eco24I GRGCYC 2 cut(s) 422, 524
Eco31I GGTCTC 1 cut(s) 1574
Eco47I GGWCC 5 cut(s) 354, 455, 580, 784, 1164
Eco47III AGCGCT 1 cut(s) 382
Eco52I CGGCCG 1 cut(s) 478
Eco53kI GAGCTC 1 cut(s) 522
Eco57I CTGAAG 1 cut(s) 1305
Eco72I CACGTG 1 cut(s) 647
Eco88I CYCGRG 1 cut(s) 1170
EcoICRI GAGCTC 1 cut(s) 522
EcoO109I RGGNCCY 2 cut(s) 354, 418
EcoRII CCWGG 1 cut(s) 742
EcoT14I CCWWGG 4 cut(s) 536, 673, 882, 1732
EcoT22I ATGCAT 1 cut(s) 1123
EcoT38I GRGCYC 2 cut(s) 422, 524
ErhI CCWWGG 4 cut(s) 536, 673, 882, 1732
Esp3I CGTCTC 1 cut(s) 1025
FaeI CATG 7 cut(s) 540, 557, 677, 886, 1006, 1125, 1502
FalI AAGNNNNNCTT 4 cut(s) 1487, 1519, 1635, 1667
FaqI GGGAC 3 cut(s) 340, 691, 1177
FatI CATG 7 cut(s) 536, 553, 673, 882, 1002, 1121, 1498
FauI CCCGC 1 cut(s) 1458
FblI GTMKAC 1 cut(s) 600
FokI GGATG 1 cut(s) 1187
FriOI GRGCYC 2 cut(s) 422, 524
FspBI CTAG 5 cut(s) 38, 384, 549, 854, 1028
GlaI GCGC 3 cut(s) 348, 382, 430
GsaI CCCAGC 3 cut(s) 361, 367, 1164
GsuI CTGGAG 2 cut(s) 744, 1363
HaeII RGCGCY 1 cut(s) 384
HapII CCGG 5 cut(s) 374, 426, 453, 697, 937
HgaI GACGC 2 cut(s) 322, 559
HhaI GCGC 3 cut(s) 349, 383, 431
Hin1I GRCGYC 2 cut(s) 407, 570
Hin1II CATG 7 cut(s) 540, 557, 677, 886, 1006, 1125, 1502
Hin6I GCGC 3 cut(s) 347, 381, 429
HinP1I GCGC 3 cut(s) 347, 381, 429
HincII GTYRAC 1 cut(s) 601
HindII GTYRAC 1 cut(s) 601
HinfI GANTC 7 cut(s) 293, 679, 1345, 1355, 1374, 1530, 1591
HpaII CCGG 5 cut(s) 374, 426, 453, 697, 937
HphI GGTGA 3 cut(s) 92, 111, 262
Hpy166II GTNNAC 6 cut(s) 20, 45, 601, 753, 1602, 1609
Hpy188I TCNGA 7 cut(s) 298, 495, 1285, 1360, 1453, 1637, 1762
Hpy188III TCNNGA 9 cut(s) 1028, 1062, 1172, 1223, 1334, 1349, 1367, 1504, 1699
Hpy8I GTNNAC 6 cut(s) 20, 45, 601, 753, 1602, 1609
Hpy99I CGWCG 5 cut(s) 476, 479, 575, 602, 605
HpyAV CCTTC 7 cut(s) 80, 201, 214, 224, 1229, 1540, 1590
HpyCH4III ACNGT 2 cut(s) 1198, 1606
HpyCH4IV ACGT 2 cut(s) 407, 646
HpyF3I CTNAG 4 cut(s) 26, 531, 704, 1134
HpySE526I ACGT 2 cut(s) 407, 646
Hsp92I GRCGYC 2 cut(s) 407, 570
Hsp92II CATG 7 cut(s) 540, 557, 677, 886, 1006, 1125, 1502
HspAI GCGC 3 cut(s) 347, 381, 429
KflI GGGWCCC 1 cut(s) 354
KspI CCGCGG 1 cut(s) 465
Kzo9I GATC 4 cut(s) 438, 635, 1400, 1416
LguI GCTCTTC 1 cut(s) 506
LmnI GCTCC 5 cut(s) 269, 661, 725, 1125, 1462
Lsp1109I GCAGC 9 cut(s) 303, 328, 356, 382, 823, 851, 860, 1639, 1708
LweI GCATC 3 cut(s) 835, 948, 1457
MaeI CTAG 5 cut(s) 38, 384, 549, 854, 1028
MaeII ACGT 2 cut(s) 407, 646
MaeIII GTNAC 5 cut(s) 80, 403, 1005, 1147, 1213
MalI GATC 4 cut(s) 440, 637, 1402, 1418
MbiI CCGCTC 1 cut(s) 1465
MboI GATC 4 cut(s) 438, 635, 1400, 1416
MboII GAAGA 8 cut(s) 186, 270, 523, 662, 870, 1364, 1395, 1763
MfeI CAATTG 1 cut(s) 1704
MflI RGATCY 1 cut(s) 1400
MhlI GDGCHC 4 cut(s) 422, 524, 1027, 1333
MlsI TGGCCA 1 cut(s) 1737
MluCI AATT 9 cut(s) 861, 927, 1039, 1077, 1266, 1425, 1577, 1683, 1704
MluNI TGGCCA 1 cut(s) 1737
MlyI GAGTC 5 cut(s) 287, 673, 1349, 1354, 1600
MmeI TCCRAC 1 cut(s) 321
Mox20I TGGCCA 1 cut(s) 1737
Mph1103I ATGCAT 1 cut(s) 1123
MscI TGGCCA 1 cut(s) 1737
MseI TTAA 3 cut(s) 8, 1200, 1428
MslI CAYNNNNRTG 1 cut(s) 1316
Msp20I TGGCCA 1 cut(s) 1737
MspA1I CMGCKG 1 cut(s) 464
MspI CCGG 5 cut(s) 374, 426, 453, 697, 937
MspR9I CCNGG 4 cut(s) 426, 698, 744, 937
MunI CAATTG 1 cut(s) 1704
MvaI CCWGG 1 cut(s) 744
MvnI CGCG 5 cut(s) 349, 395, 431, 464, 483
NciI CCSGG 3 cut(s) 426, 698, 937
NcoI CCATGG 3 cut(s) 536, 673, 882
NdeII GATC 4 cut(s) 438, 635, 1400, 1416
NheI GCTAGC 1 cut(s) 383
NlaIII CATG 7 cut(s) 540, 557, 677, 886, 1006, 1125, 1502
NlaIV GGNNCC 8 cut(s) 355, 356, 419, 420, 582, 630, 741, 1165
NmeAIII GCCGAG 2 cut(s) 54, 303
NmuCI GTSAC 3 cut(s) 80, 403, 1005
NsiI ATGCAT 1 cut(s) 1123
NspI RCATGY 1 cut(s) 1502
PceI AGGCCT 1 cut(s) 154
PciSI GCTCTTC 1 cut(s) 506
PcsI WCGNNNNNNNCGW 5 cut(s) 294, 330, 480, 567, 594
PfeI GAWTC 2 cut(s) 1374, 1530
PflMI CCANNNNNTGG 2 cut(s) 1097, 1540
PleI GAGTC 5 cut(s) 287, 673, 1349, 1353, 1599
PmaCI CACGTG 1 cut(s) 647
PmlI CACGTG 1 cut(s) 647
PpsI GAGTC 5 cut(s) 287, 673, 1349, 1353, 1599
Ppu21I YACGTR 1 cut(s) 647
PpuMI RGGWCCY 1 cut(s) 354
Psp124BI GAGCTC 1 cut(s) 524
Psp5II RGGWCCY 1 cut(s) 354
Psp6I CCWGG 1 cut(s) 742
PspCI CACGTG 1 cut(s) 647
PspFI CCCAGC 3 cut(s) 357, 363, 1160
PspGI CCWGG 1 cut(s) 742
PspN4I GGNNCC 8 cut(s) 355, 356, 419, 420, 582, 630, 741, 1165
PspOMI GGGCCC 1 cut(s) 418
PspPPI RGGWCCY 1 cut(s) 354
PstI CTGCAG 3 cut(s) 346, 841, 1588
PstNI CAGNNNCTG 1 cut(s) 316
PsuI RGATCY 1 cut(s) 1400
RsaI GTAC 1 cut(s) 19
RsaNI GTAC 1 cut(s) 18
RseI CAYNNNNRTG 1 cut(s) 1316
Rsr2I CGGWCCG 1 cut(s) 455
RsrII CGGWCCG 1 cut(s) 455
SacI GAGCTC 1 cut(s) 524
SacII CCGCGG 1 cut(s) 465
SalI GTCGAC 1 cut(s) 599
SapI GCTCTTC 1 cut(s) 506
SaqAI TTAA 3 cut(s) 8, 1200, 1428
Sau3AI GATC 4 cut(s) 438, 635, 1400, 1416
SbfI CCTGCAGG 1 cut(s) 1588
SchI GAGTC 5 cut(s) 287, 673, 1349, 1354, 1600
ScrFI CCNGG 4 cut(s) 426, 698, 744, 937
SdaI CCTGCAGG 1 cut(s) 1588
SduI GDGCHC 4 cut(s) 422, 524, 1027, 1333
SfaNI GCATC 3 cut(s) 835, 948, 1457
SfcI CTRYAG 5 cut(s) 342, 837, 1143, 1584, 1671
Sfr303I CCGCGG 1 cut(s) 465
SgrBI CCGCGG 1 cut(s) 465
SgrDI CGTCGACG 1 cut(s) 599
SinI GGWCC 5 cut(s) 354, 455, 580, 784, 1164
SmiMI CAYNNNNRTG 1 cut(s) 1316
SmlI CTYRAG 1 cut(s) 681
SmoI CTYRAG 1 cut(s) 681
SpeI ACTAGT 1 cut(s) 548
Sse8387I CCTGCAGG 1 cut(s) 1588
Sse9I AATT 9 cut(s) 861, 927, 1039, 1077, 1266, 1425, 1577, 1683, 1704
SseBI AGGCCT 1 cut(s) 154
SspI AATATT 2 cut(s) 1554, 1780
SspMI CTAG 5 cut(s) 38, 384, 549, 854, 1028
SstI GAGCTC 1 cut(s) 524
StuI AGGCCT 1 cut(s) 154
StyD4I CCNGG 4 cut(s) 424, 696, 742, 935
StyI CCWWGG 4 cut(s) 536, 673, 882, 1732
TaaI ACNGT 2 cut(s) 1198, 1606
TaiI ACGT 2 cut(s) 410, 649
TaqI TCGA 4 cut(s) 561, 600, 1394, 1594
TasI AATT 9 cut(s) 861, 927, 1039, 1077, 1266, 1425, 1577, 1683, 1704
TatI WGTACW 1 cut(s) 17
TauI GCSGC 8 cut(s) 370, 398, 448, 483, 780, 860, 964, 967
TfiI GAWTC 2 cut(s) 1374, 1530
Tru1I TTAA 3 cut(s) 8, 1200, 1428
Tru9I TTAA 3 cut(s) 8, 1200, 1428
TscAI CASTG 4 cut(s) 266, 911, 1255, 1525
TseFI GTSAC 3 cut(s) 80, 403, 1005
TseI GCWGC 9 cut(s) 316, 341, 344, 370, 836, 839, 848, 1627, 1721
Tsp45I GTSAC 3 cut(s) 80, 403, 1005
TspDTI ATGAA 1 cut(s) 993
TspGWI ACGGA 2 cut(s) 447, 479
TspRI CASTG 4 cut(s) 266, 911, 1255, 1525
Van91I CCANNNNNTGG 2 cut(s) 1097, 1540
VpaK11BI GGWCC 5 cut(s) 354, 455, 580, 784, 1164
XapI RAATTY 2 cut(s) 1577, 1683
XbaI TCTAGA 1 cut(s) 1027
XceI RCATGY 1 cut(s) 1502
XcmI CCANNNNNNNNNTGG 2 cut(s) 1174, 1255
XmiI GTMKAC 1 cut(s) 600
XspI CTAG 5 cut(s) 38, 384, 549, 854, 1028
ZraI GACGTC 1 cut(s) 408
Zsp2I ATGCAT 1 cut(s) 1123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.