RLG00000000715
ERF Family

Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0012258
Physical Location & Seq
Forward (+)
4331322 .. 4336146
4825 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000715

Sequence Viewer

Length: 1914 bp
ATGGCCTCTCTGCTCTCGCCTCTCCGCTTTCGCCATTTTCTTTACACAAGGCCTAAACTTAAACTGAAACCCCCTCATCCGATCTCTGCCGCTTCTTTCAAACCCCTCCTCACACTCCGCCCTCGCTCCCCTCCCTATTTACACTCCTGCCACTGCTCCTTCACCGCCTCTTCCCCACTCGCAGACTCCGACTACAAAACCCAGACGCTGCTTCTCGGCAAAGACGAGCGAGCTGCAGTAGCGCGTGGGTCCCAGCCGCAGCCGCAGAGCAGTAGCACAATCGCCGCCATTGTGACGTCAGTTGGGGGCCCACCCGGCGCGGTTGGGATCGTGCGGCTGTCCGGTCCGTCCGCGGTGGCCGTCGTCGGCCGCGTGTTCCGACCGAGCAAGAAAAAGAGAAAGAGCAAGAGCTCTGGTACTGAGCCTTGGCGACCCACTAGTCATGTAATCGAATACGGCGTCGTTTTGGACCCCAACGGCAATGTCGTCGACGAGGTTTTAGCTGTGCCAATGTTGGCCCCAAGATCATATACACGTGAAGATGTGGTGGAGCTTCAATGCCATGGGACTCAAGTGTGTCTGAACCGGGTTCTCAGAGCTTGTTTAGAAGCTGGAGCAAGGCTTGCAGAACCAGGTGAGTTTACTTTGCGTGCTTTTCTCAATGGCCGCTTGGACCTGACTCAAGCTGAAAATGTTGACAAACTCATTTCGGCCAAGTCTGTGGCTGCAGCAGATGCAGCACTGGCCGCGATTCAGGGTGGCTTTTCTTCCATGGTAAAATCTGTAAGATTTCAGTGCATTGAGTTGCTTACTGAAATTGAAGCCCGGTTAGATTTTGATGATGAGATGCCACCGCTTGATACCAGTGAAGTTGTGAATAAAATACATTCCATGTCACAAGATGTTGAGAGTGCTCTAGAGACGGCCAATTATGACCAACTTCTGCAATCTGGATTACAGATAGCGATTGTCGGCCGTCCAAATGTTGGGAAATCAAGCCTCCTCAATGCATGGAGCAAAACTGAGAGAGCTATAGTTACAGAAGTTGCTGGGACCACTCGGGATGTGGTTGAAGCCAGTATTACAGTTAGTGGTATTCCTGTAACACTTCTTGATACAGCAGGCATCAGGGAAACCGCCGACTTAGTGGAGAAAATTGGTGTGGAGAGGTCTGAAGCAGTTGCTATGGGTGCTGATGTCATTATTATGGCAATAAGTGCTCTTGATGGCTGGAGTCCAGAAGACACTGAACTTCTTGACAGAATCCAATCTAACAAGAAATCGACTGGATCTTCAACCCCAATGATCCTTGTAATTAACAAAATAGATTGTGTTGCATCTGATTGCTTGGAGCGGGTTCAAAAAAATGTCGGTTCTTTCAATAAGCATGTCTTGACATCTGCCATCACTGGTCAAGGAATCCAAGATTTGGAGAAGGCAATATTAGATATTGTTGGTCTCAACAAATTTCCTGCAGGGAGTCGAAGGTGGACTGTGAACCAGAGACAATGCGAGCAGCTTGTCCGAACCAAAGAGGCTCTTGCAAGGTTGAAATCCTCTATAGAGGAGGAAATTCCTTTTGACTTCTGGACGATTGATTTGAGGGAAGCTGCAATGGCCCTTGGCCAAATAAGTGGAGAAGACATTTCGGAGGAGGTTTTGACCAATATTTTTGGCAAGTTCTGCATTGGAAAAGAACTGACAAAGGAGGAACTCAAGGAGAGGGAAAAGGTAAGGAAAGCCAAGGAGAAGGAGAAGAGGATAAGAATAGAACAGGAGAAGGAGAAGGAGAAGAAGAGGCTGGAACAAGAGATGAAAAAGAAGCAAGAGAAAGAGAAGAAGAAACGCGAAGAGTTGAAACGAAAAGAAAAGGAGAAGGCGAAGATGAAGATGAAGCACAAGATAAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMR_HSR1 MnmE_helical TrmE_N

Protein Analysis

638

Amino Acids

70.29

Weight (kDa)

9.07

Isoelectric Point (pI)

47.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TrmE_N PF10396 93 - 223 4.1e-37 GTP-binding protein TrmE N-terminus
MnmE_helical PF12631 226 - 562 3.1e-49 MnmE helical domain
MMR_HSR1 PF01926 320 - 441 1.1e-24 50S ribosome-binding GTPase
FeoB_N PF02421 320 - 481 2e-08 Ferrous iron transport protein B
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012258)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78010
fragaria_vesca FvH4_5g38010 FvH4_5g38010
malus_domestica MD08G1177300.v1.1 MD15G1355000.v1.1
prunus_persica Prupe.1G511900_v2.0.a1
pyrus_communis pycom08g15220
rosa_chinensis RchiOBHm_Chr7g0239951
rosa_laevigata RLG00000000715
rosa_multiflora Rmu_sc0000540.1_g000022 Rmu_sc0006825.1_g000001 Rmu_sc0035965.1_g000001
rosa_roxburghii Rroxscaffold_3G00220600
rosa_rugosa Rorug07G0331400
rosa_samantha Rh7AG485100 Rh7BG458100 Rh7CG502400 Rh7DG470700
rosa_wichuraiana Rw7G040690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 438
AatII GACGTC 1 cut(s) 299
AccB7I CCANNNNNTGG 2 cut(s) 986, 1429
AccBSI CCGCTC 1 cut(s) 1354
AccI GTMKAC 1 cut(s) 489
AccII CGCG 6 cut(s) 244, 320, 353, 372, 749, 1848
AclWI GGATC 3 cut(s) 335, 1297, 1300
AcoI YGGCCR 8 cut(s) 357, 367, 664, 711, 744, 924, 973, 1624
AcsI RAATTY 2 cut(s) 1466, 1572
AcuI CTGAAG 1 cut(s) 1194
AcvI CACGTG 1 cut(s) 536
AcyI GRCGYC 2 cut(s) 296, 459
AfaI GTAC 1 cut(s) 418
AfiI CCNNNNNNNGG 2 cut(s) 986, 1429
AflIII ACRYGT 1 cut(s) 533
AgsI TTSAA 9 cut(s) 100, 557, 821, 1073, 1296, 1361, 1381, 1552, 1858
AhlI ACTAGT 1 cut(s) 437
AjnI CCWGG 1 cut(s) 631
Alw21I GWGCWC 3 cut(s) 413, 916, 1222
Alw26I GTCTC 3 cut(s) 914, 1463, 1498
AlwI GGATC 3 cut(s) 335, 1297, 1300
AlwNI CAGNNNCTG 1 cut(s) 208
Ama87I CYCGRG 1 cut(s) 1059
ApaI GGGCCC 1 cut(s) 311
ApeKI GCWGC 8 cut(s) 208, 233, 259, 725, 728, 737, 1516, 1610
ApoI RAATTY 2 cut(s) 1466, 1572
ArsI GACNNNNNNTTYG 4 cut(s) 444, 476, 1582, 1614
AspLEI GCGC 2 cut(s) 244, 320
AspS9I GGNCC 9 cut(s) 249, 307, 308, 344, 469, 517, 673, 1053, 1618
AsuC2I CCSGG 3 cut(s) 315, 587, 826
AsuHPI GGTGA 2 cut(s) 154, 647
AvaI CYCGRG 1 cut(s) 1059
AvaII GGWCC 5 cut(s) 249, 344, 469, 673, 1053
BaeGI GKGCMC 1 cut(s) 311
BalI TGGCCA 1 cut(s) 1626
BanII GRGCYC 2 cut(s) 311, 413
BbrPI CACGTG 1 cut(s) 536
BbsI GAAGAC 2 cut(s) 1248, 1647
Bbv12I GWGCWC 3 cut(s) 413, 916, 1222
BbvI GCAGC 8 cut(s) 195, 220, 271, 712, 740, 749, 1528, 1597
BccI CCATC 2 cut(s) 1220, 1412
BceAI ACGGC 5 cut(s) 344, 472, 493, 939, 960
BcgI CGANNNNNNTGC 4 cut(s) 215, 249, 469, 503
BciT130I CCWGG 1 cut(s) 633
BcnI CCSGG 3 cut(s) 315, 587, 826
BcoDI GTCTC 3 cut(s) 914, 1463, 1498
BcuI ACTAGT 1 cut(s) 437
BfaI CTAG 2 cut(s) 438, 917
BfmI CTRYAG 5 cut(s) 234, 726, 1032, 1473, 1560
BglI GCCNNNNNGGC 1 cut(s) 315
Bme1390I CCNGG 4 cut(s) 315, 587, 633, 826
Bme18I GGWCC 5 cut(s) 249, 344, 469, 673, 1053
BmeT110I CYCGRG 1 cut(s) 1059
BmgT120I GGNCC 9 cut(s) 249, 307, 308, 344, 469, 517, 673, 1053, 1618
BmiI GGNNCC 7 cut(s) 250, 251, 308, 309, 471, 519, 1054
BmrFI CCNGG 4 cut(s) 315, 587, 633, 826
BmsI GCATC 4 cut(s) 724, 837, 1134, 1346
BpiI GAAGAC 2 cut(s) 1248, 1647
BpmI CTGGAG 2 cut(s) 633, 1252
BpuEI CTTGAG 3 cut(s) 555, 666, 1700
BpuMI CCSGG 3 cut(s) 315, 587, 826
BsaAI YACGTR 1 cut(s) 536
BsaHI GRCGYC 2 cut(s) 296, 459
BsaI GGTCTC 1 cut(s) 1463
BsaJI CCNNGG 6 cut(s) 351, 425, 562, 771, 1621, 1743
BsaWI WCCGGW 1 cut(s) 341
Bsc4I CCNNNNNNNGG 2 cut(s) 986, 1429
Bse1I ACTGG 5 cut(s) 747, 864, 1077, 1291, 1414
Bse3DI GCAATG 2 cut(s) 487, 1620
BseBI CCWGG 1 cut(s) 633
BseDI CCNNGG 6 cut(s) 351, 425, 562, 771, 1621, 1743
BseGI GGATG 2 cut(s) 76, 1069
BseLI CCNNNNNNNGG 2 cut(s) 986, 1429
BseMI GCAATG 2 cut(s) 487, 1620
BseMII CTCAG 3 cut(s) 411, 607, 1014
BseNI ACTGG 5 cut(s) 747, 864, 1077, 1291, 1414
BseRI GAGGAG 4 cut(s) 98, 992, 1580, 1667
BseSI GKGCMC 1 cut(s) 311
BseX3I CGGCCG 2 cut(s) 367, 973
BseXI GCAGC 8 cut(s) 195, 220, 271, 712, 740, 749, 1528, 1597
BseYI CCCAGC 2 cut(s) 252, 1049
Bsh1236I CGCG 6 cut(s) 244, 320, 353, 372, 749, 1848
Bsh1285I CGRYCG 3 cut(s) 370, 383, 976
BsiEI CGRYCG 3 cut(s) 370, 383, 976
BsiHKAI GWGCWC 3 cut(s) 413, 916, 1222
BsiHKCI CYCGRG 1 cut(s) 1059
BsiSI CCGG 4 cut(s) 315, 342, 586, 826
BslFI GGGAC 3 cut(s) 235, 580, 1066
BslI CCNNNNNNNGG 2 cut(s) 986, 1429
BsmAI GTCTC 3 cut(s) 914, 1463, 1498
BsmBI CGTCTC 1 cut(s) 914
BsmFI GGGAC 3 cut(s) 235, 580, 1066
Bso31I GGTCTC 1 cut(s) 1463
BsoBI CYCGRG 1 cut(s) 1059
Bsp120I GGGCCC 1 cut(s) 307
Bsp1286I GDGCHC 4 cut(s) 311, 413, 916, 1222
Bsp143I GATC 5 cut(s) 81, 327, 524, 1289, 1305
Bsp19I CCATGG 2 cut(s) 562, 771
BspCNI CTCAG 3 cut(s) 412, 606, 1015
BspFNI CGCG 6 cut(s) 244, 320, 353, 372, 749, 1848
BspLI GGNNCC 7 cut(s) 250, 251, 308, 309, 471, 519, 1054
BspMAI CTGCAG 3 cut(s) 238, 730, 1477
BspPI GGATC 3 cut(s) 335, 1297, 1300
BspTNI GGTCTC 1 cut(s) 1463
BsrBI CCGCTC 1 cut(s) 1354
BsrDI GCAATG 2 cut(s) 487, 1620
BsrI ACTGG 5 cut(s) 747, 864, 1077, 1291, 1414
BssECI CCNNGG 6 cut(s) 351, 425, 562, 771, 1621, 1743
BssMI GATC 5 cut(s) 81, 327, 524, 1289, 1305
BssNI GRCGYC 2 cut(s) 296, 459
BssT1I CCWWGG 5 cut(s) 425, 562, 771, 1621, 1743
Bst2UI CCWGG 1 cut(s) 633
Bst4CI ACNGT 2 cut(s) 1087, 1495
Bst6I CTCTTC 4 cut(s) 175, 1751, 1790, 1845
BstACI GRCGYC 2 cut(s) 296, 459
BstAPI GCANNNNNTGC 4 cut(s) 623, 734, 1217, 1683
BstBAI YACGTR 1 cut(s) 536
BstC8I GCNNGC 5 cut(s) 231, 624, 651, 1123, 1514
BstDEI CTNAG 4 cut(s) 420, 593, 1023, 1144
BstDSI CCRYGG 3 cut(s) 351, 562, 771
BstF5I GGATG 2 cut(s) 76, 1069
BstFNI CGCG 6 cut(s) 244, 320, 353, 372, 749, 1848
BstHHI GCGC 2 cut(s) 244, 320
BstKTI GATC 5 cut(s) 84, 330, 527, 1292, 1308
BstMAI GTCTC 3 cut(s) 914, 1463, 1498
BstMBI GATC 5 cut(s) 81, 327, 524, 1289, 1305
BstMCI CGRYCG 3 cut(s) 370, 383, 976
BstNI CCWGG 1 cut(s) 633
BstNSI RCATGY 1 cut(s) 1391
BstSCI CCNGG 4 cut(s) 313, 585, 631, 824
BstSFI CTRYAG 5 cut(s) 234, 726, 1032, 1473, 1560
BstSLI GKGCMC 1 cut(s) 311
BstUI CGCG 6 cut(s) 244, 320, 353, 372, 749, 1848
BstV1I GCAGC 8 cut(s) 195, 220, 271, 712, 740, 749, 1528, 1597
BstV2I GAAGAC 2 cut(s) 1248, 1647
BstX2I RGATCY 1 cut(s) 1289
BstXI CCANNNNNNTGG 2 cut(s) 721, 1634
BstYI RGATCY 1 cut(s) 1289
BstZI CGGCCG 2 cut(s) 367, 973
BtgI CCRYGG 3 cut(s) 351, 562, 771
BtsCI GGATG 2 cut(s) 76, 1069
BtsI GCAGTG 1 cut(s) 151
BtsIMutI CAGTG 6 cut(s) 151, 740, 800, 871, 1245, 1407
Cac8I GCNNGC 5 cut(s) 231, 624, 651, 1123, 1514
CaiI CAGNNNCTG 1 cut(s) 208
CfoI GCGC 2 cut(s) 244, 320
Cfr13I GGNCC 9 cut(s) 249, 307, 308, 344, 469, 517, 673, 1053, 1618
Cfr42I CCGCGG 1 cut(s) 354
CpoI CGGWCCG 1 cut(s) 344
CseI GACGC 2 cut(s) 214, 448
CsiI ACCWGGT 1 cut(s) 631
Csp6I GTAC 1 cut(s) 417
CspI CGGWCCG 1 cut(s) 344
CviAII CATG 6 cut(s) 443, 563, 772, 892, 1011, 1388
CviQI GTAC 1 cut(s) 417
DdeI CTNAG 4 cut(s) 420, 593, 1023, 1144
DpnI GATC 5 cut(s) 83, 329, 526, 1291, 1307
DpnII GATC 5 cut(s) 81, 327, 524, 1289, 1305
DrdI GACNNNNNNGTC 1 cut(s) 438
DseDI GACNNNNNNGTC 1 cut(s) 438
EaeI YGGCCR 8 cut(s) 357, 367, 664, 711, 744, 924, 973, 1624
EagI CGGCCG 2 cut(s) 367, 973
Eam1104I CTCTTC 4 cut(s) 175, 1751, 1790, 1845
EarI CTCTTC 4 cut(s) 175, 1751, 1790, 1845
EciI GGCGGA 1 cut(s) 107
Ecl136II GAGCTC 1 cut(s) 411
EclXI CGGCCG 2 cut(s) 367, 973
Eco130I CCWWGG 5 cut(s) 425, 562, 771, 1621, 1743
Eco147I AGGCCT 1 cut(s) 52
Eco24I GRGCYC 2 cut(s) 311, 413
Eco31I GGTCTC 1 cut(s) 1463
Eco47I GGWCC 5 cut(s) 249, 344, 469, 673, 1053
Eco52I CGGCCG 2 cut(s) 367, 973
Eco53kI GAGCTC 1 cut(s) 411
Eco57I CTGAAG 1 cut(s) 1194
Eco72I CACGTG 1 cut(s) 536
Eco88I CYCGRG 1 cut(s) 1059
EcoICRI GAGCTC 1 cut(s) 411
EcoO109I RGGNCCY 2 cut(s) 249, 307
EcoRII CCWGG 1 cut(s) 631
EcoT14I CCWWGG 5 cut(s) 425, 562, 771, 1621, 1743
EcoT22I ATGCAT 1 cut(s) 1012
EcoT38I GRGCYC 2 cut(s) 311, 413
ErhI CCWWGG 5 cut(s) 425, 562, 771, 1621, 1743
Esp3I CGTCTC 1 cut(s) 914
FaeI CATG 6 cut(s) 446, 566, 775, 895, 1014, 1391
FalI AAGNNNNNCTT 4 cut(s) 1376, 1408, 1524, 1556
FaqI GGGAC 3 cut(s) 235, 580, 1066
FatI CATG 6 cut(s) 442, 562, 771, 891, 1010, 1387
FauI CCCGC 1 cut(s) 1347
FblI GTMKAC 1 cut(s) 489
FokI GGATG 2 cut(s) 63, 1076
FriOI GRGCYC 2 cut(s) 311, 413
FspBI CTAG 2 cut(s) 438, 917
GlaI GCGC 2 cut(s) 243, 319
GsaI CCCAGC 2 cut(s) 256, 1053
GsuI CTGGAG 2 cut(s) 633, 1252
HapII CCGG 4 cut(s) 315, 342, 586, 826
HgaI GACGC 2 cut(s) 214, 448
HhaI GCGC 2 cut(s) 244, 320
Hin1I GRCGYC 2 cut(s) 296, 459
Hin1II CATG 6 cut(s) 446, 566, 775, 895, 1014, 1391
Hin6I GCGC 2 cut(s) 242, 318
HinP1I GCGC 2 cut(s) 242, 318
HincII GTYRAC 2 cut(s) 490, 697
HindII GTYRAC 2 cut(s) 490, 697
HinfI GANTC 8 cut(s) 185, 568, 679, 751, 1234, 1263, 1419, 1480
HpaII CCGG 4 cut(s) 315, 342, 586, 826
HphI GGTGA 2 cut(s) 154, 647
Hpy166II GTNNAC 5 cut(s) 490, 642, 697, 1491, 1498
Hpy188I TCNGA 9 cut(s) 81, 190, 380, 582, 596, 1174, 1342, 1526, 1651
Hpy188III TCNNGA 9 cut(s) 917, 951, 1061, 1112, 1223, 1238, 1256, 1393, 1588
Hpy8I GTNNAC 5 cut(s) 490, 642, 697, 1491, 1498
Hpy99I CGWCG 5 cut(s) 365, 368, 464, 491, 494
HpyAV CCTTC 7 cut(s) 169, 1429, 1479, 1744, 1774, 1780, 1870
HpyCH4III ACNGT 2 cut(s) 1087, 1495
HpyCH4IV ACGT 2 cut(s) 296, 535
HpyF3I CTNAG 4 cut(s) 420, 593, 1023, 1144
HpySE526I ACGT 2 cut(s) 296, 535
Hsp92I GRCGYC 2 cut(s) 296, 459
Hsp92II CATG 6 cut(s) 446, 566, 775, 895, 1014, 1391
HspAI GCGC 2 cut(s) 242, 318
KflI GGGWCCC 1 cut(s) 249
KspI CCGCGG 1 cut(s) 354
Kzo9I GATC 5 cut(s) 81, 327, 524, 1289, 1305
LmnI GCTCC 6 cut(s) 131, 161, 550, 614, 1014, 1351
Lsp1109I GCAGC 8 cut(s) 195, 220, 271, 712, 740, 749, 1528, 1597
LweI GCATC 4 cut(s) 724, 837, 1134, 1346
MabI ACCWGGT 1 cut(s) 631
MaeI CTAG 2 cut(s) 438, 917
MaeII ACGT 2 cut(s) 296, 535
MaeIII GTNAC 4 cut(s) 292, 894, 1036, 1102
MalI GATC 5 cut(s) 83, 329, 526, 1291, 1307
MbiI CCGCTC 1 cut(s) 1354
MboI GATC 5 cut(s) 81, 327, 524, 1289, 1305
MflI RGATCY 1 cut(s) 1289
MhlI GDGCHC 4 cut(s) 311, 413, 916, 1222
MlsI TGGCCA 1 cut(s) 1626
MluCI AATT 6 cut(s) 816, 928, 1155, 1314, 1466, 1572
MluNI TGGCCA 1 cut(s) 1626
MlyI GAGTC 5 cut(s) 179, 562, 673, 1243, 1489
MmeI TCCRAC 2 cut(s) 213, 403
Mox20I TGGCCA 1 cut(s) 1626
Mph1103I ATGCAT 1 cut(s) 1012
MscI TGGCCA 1 cut(s) 1626
MseI TTAA 2 cut(s) 60, 1317
MslI CAYNNNNRTG 1 cut(s) 1205
Msp20I TGGCCA 1 cut(s) 1626
MspA1I CMGCKG 1 cut(s) 353
MspI CCGG 4 cut(s) 315, 342, 586, 826
MspR9I CCNGG 4 cut(s) 315, 587, 633, 826
MvaI CCWGG 1 cut(s) 633
MvnI CGCG 6 cut(s) 244, 320, 353, 372, 749, 1848
NciI CCSGG 3 cut(s) 315, 587, 826
NcoI CCATGG 2 cut(s) 562, 771
NdeII GATC 5 cut(s) 81, 327, 524, 1289, 1305
NlaIII CATG 6 cut(s) 446, 566, 775, 895, 1014, 1391
NlaIV GGNNCC 7 cut(s) 250, 251, 308, 309, 471, 519, 1054
NmeAIII GCCGAG 1 cut(s) 195
NmuCI GTSAC 2 cut(s) 292, 894
NsiI ATGCAT 1 cut(s) 1012
NspI RCATGY 1 cut(s) 1391
PceI AGGCCT 1 cut(s) 52
PcsI WCGNNNNNNNCGW 5 cut(s) 186, 222, 369, 456, 483
PfeI GAWTC 3 cut(s) 751, 1263, 1419
PflMI CCANNNNNTGG 2 cut(s) 986, 1429
PleI GAGTC 5 cut(s) 179, 562, 673, 1242, 1488
PmaCI CACGTG 1 cut(s) 536
PmlI CACGTG 1 cut(s) 536
PpsI GAGTC 5 cut(s) 179, 562, 673, 1242, 1488
Ppu21I YACGTR 1 cut(s) 536
PpuMI RGGWCCY 1 cut(s) 249
Psp124BI GAGCTC 1 cut(s) 413
Psp5II RGGWCCY 1 cut(s) 249
Psp6I CCWGG 1 cut(s) 631
PspCI CACGTG 1 cut(s) 536
PspFI CCCAGC 2 cut(s) 252, 1049
PspGI CCWGG 1 cut(s) 631
PspN4I GGNNCC 7 cut(s) 250, 251, 308, 309, 471, 519, 1054
PspOMI GGGCCC 1 cut(s) 307
PspPI GGNCC 9 cut(s) 249, 307, 308, 344, 469, 517, 673, 1053, 1618
PspPPI RGGWCCY 1 cut(s) 249
PstI CTGCAG 3 cut(s) 238, 730, 1477
PstNI CAGNNNCTG 1 cut(s) 208
PsuI RGATCY 1 cut(s) 1289
RsaI GTAC 1 cut(s) 418
RsaNI GTAC 1 cut(s) 417
RseI CAYNNNNRTG 1 cut(s) 1205
Rsr2I CGGWCCG 1 cut(s) 344
RsrII CGGWCCG 1 cut(s) 344
SacI GAGCTC 1 cut(s) 413
SacII CCGCGG 1 cut(s) 354
SalI GTCGAC 1 cut(s) 488
SaqAI TTAA 2 cut(s) 60, 1317
Sau3AI GATC 5 cut(s) 81, 327, 524, 1289, 1305
Sau96I GGNCC 9 cut(s) 249, 307, 308, 344, 469, 517, 673, 1053, 1618
SbfI CCTGCAGG 1 cut(s) 1477
SchI GAGTC 5 cut(s) 179, 562, 673, 1243, 1489
ScrFI CCNGG 4 cut(s) 315, 587, 633, 826
SdaI CCTGCAGG 1 cut(s) 1477
SduI GDGCHC 4 cut(s) 311, 413, 916, 1222
SexAI ACCWGGT 1 cut(s) 631
SfaNI GCATC 4 cut(s) 724, 837, 1134, 1346
SfcI CTRYAG 5 cut(s) 234, 726, 1032, 1473, 1560
Sfr303I CCGCGG 1 cut(s) 354
SgrBI CCGCGG 1 cut(s) 354
SgrDI CGTCGACG 1 cut(s) 488
SinI GGWCC 5 cut(s) 249, 344, 469, 673, 1053
SmiMI CAYNNNNRTG 1 cut(s) 1205
SmlI CTYRAG 3 cut(s) 570, 681, 1715
SmoI CTYRAG 3 cut(s) 570, 681, 1715
SpeI ACTAGT 1 cut(s) 437
Sse8387I CCTGCAGG 1 cut(s) 1477
Sse9I AATT 6 cut(s) 816, 928, 1155, 1314, 1466, 1572
SseBI AGGCCT 1 cut(s) 52
SspI AATATT 2 cut(s) 1443, 1669
SspMI CTAG 2 cut(s) 438, 917
SstI GAGCTC 1 cut(s) 413
StuI AGGCCT 1 cut(s) 52
StyD4I CCNGG 4 cut(s) 313, 585, 631, 824
StyI CCWWGG 5 cut(s) 425, 562, 771, 1621, 1743
TaaI ACNGT 2 cut(s) 1087, 1495
TaiI ACGT 2 cut(s) 299, 538
TaqI TCGA 4 cut(s) 450, 489, 1283, 1483
TaqII GACCGA 1 cut(s) 397
TasI AATT 6 cut(s) 816, 928, 1155, 1314, 1466, 1572
TauI GCSGC 8 cut(s) 92, 259, 265, 287, 337, 372, 669, 749
TfiI GAWTC 3 cut(s) 751, 1263, 1419
Tru1I TTAA 2 cut(s) 60, 1317
Tru9I TTAA 2 cut(s) 60, 1317
TscAI CASTG 6 cut(s) 158, 747, 800, 871, 1252, 1414
TseFI GTSAC 2 cut(s) 292, 894
TseI GCWGC 8 cut(s) 208, 233, 259, 725, 728, 737, 1516, 1610
Tsp45I GTSAC 2 cut(s) 292, 894
TspDTI ATGAA 3 cut(s) 1829, 1901, 1907
TspGWI ACGGA 1 cut(s) 336
TspRI CASTG 6 cut(s) 158, 747, 800, 871, 1252, 1414
Van91I CCANNNNNTGG 2 cut(s) 986, 1429
VpaK11BI GGWCC 5 cut(s) 249, 344, 469, 673, 1053
XapI RAATTY 2 cut(s) 1466, 1572
XbaI TCTAGA 1 cut(s) 916
XceI RCATGY 1 cut(s) 1391
XcmI CCANNNNNNNNNTGG 1 cut(s) 1063
XmiI GTMKAC 1 cut(s) 489
XspI CTAG 2 cut(s) 438, 917
ZraI GACGTC 1 cut(s) 297
Zsp2I ATGCAT 1 cut(s) 1012
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.