Rh7AG485100
ERF Family

Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0012258
Physical Location & Seq
Reverse (-)
68443177 .. 68446504
3328 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG485100.1

Sequence Viewer

Length: 1410 bp
ATGGCCTCTCTGCTCTCACCTCTCCGCTTTCGCCATTTTCTTTACACAAGGCCTAAACTTAAACTGAAACTGAAACCCCCTTATCTAATCTCTGCCGCCTCTTTCAAACCCCTCCTCAAACTCCGCCCTCGCTCCCCTCCCTATTTACACTCCTGCCACTGCTCCTTCACCGCCTCTTCCCCACTCGCAGACTCCGACTACAAAACCCAGACGCTGCTTCTCGGCAGAGACGAGCGAGCTGCCCTAGTGAGTGGGTCCCAGCCGCAGCCGGAGAGCGCGAGCACAATCGCGGCCATTGTGACATCAGTTGGGGGCCCACCCGGCGCGGTTGGGATCGTGCGGCTGTCCGGCCCGTCCGCGGTGGCCGTCGTCGGCCGCGTGTTCCGTCCGAGCAAGAAAAAGAGAAAGAGCAAGAGCTCTGGTGCTGAGCCATGGCGACCCACTAGTCATGTAATCGAATACGGCGTCGTTTTGGACCCCAACGGCAATGTCGTCGACGAGGTTTTAGCTGTGACAATGTTGGCCCCAAGATCATATACACGTGAAGATGTGGTGGAGCTTCAATGCCATGGGACTCAAGTGTGTCTGAACCGGGTTCTAAGAGCTTGTTTAGAAGCTGGAGCAAGGCTTGCGGAACCAGGGGACTGCTCATTGTGTTTTATGGTAGTCTGGATAGCAATTCTGGGCCGTCCAAATGTTGGGAAATCAAGCCTCCTCAATGCATGGAGCAAAACTGAGAGAGCTATAGTTACAGAAGTTGCTGGGACCACTCGGGATGTGGTTGAAGCCAGTATTACAGTTAATGGTATTCCTGTAACCCTTCTTGATACAGCAGGCATCAGGGAAACCACTGACATAGTGGAGAAAATTGGTGTGGAGAGGTCTGAAGCAGTTGCTATGGGTGCTGATGTCATTATTATGGCAATAAGTGCTCTTGATGGCTGGAGTCCAGAAGACTCTGAACTTCTTGACAGAATCCAATCTAACAAGAAATCGACTGGATCTTCAACCCCAATGATCCTTGTAATTAACAAAATAGATTGTGTTTCATTTGATTGCTTGGAGCGGGTTCAAAAAAATGTCGGTTCTTTCAATAAGCATGTCTTGACATCTGCCATCACTGGTCAAGGAATCCAAGATTTGGAGAAGGCAATATTAGATATTGTTGGTCTCAACAAATTTCCTGCAGGGAGTCGAAGGTGGACTGTGAACCAGAGACAATGCGAGCAGCTTGTCCGAACCAAAGAGGCTCTTGCAAGGTTGAAATCCTCTATAGAGGAGGAAATTCCTTTTGACTTCTGGACGATTGATTTGAGGGAAGCTGCAATGGCCCTTGGCCAAATAAGTGGAGAAGACATTTCGGAGGAGGTTTTGACCAATATTTTTGGCAAGTTCTGCATTGGTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMR_HSR1 MnmE_helical TrmE_N

Protein Analysis

469

Amino Acids

50.91

Weight (kDa)

8.68

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TrmE_N PF10396 95 - 215 1.1e-29 GTP-binding protein TrmE N-terminus
MMR_HSR1 PF01926 225 - 345 2e-24 50S ribosome-binding GTPase
FeoB_N PF02421 225 - 384 5.9e-08 Ferrous iron transport protein B
MnmE_helical PF12631 271 - 466 4.2e-24 MnmE helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012258)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78010
fragaria_vesca FvH4_5g38010 FvH4_5g38010
malus_domestica MD08G1177300.v1.1 MD15G1355000.v1.1
prunus_persica Prupe.1G511900_v2.0.a1
pyrus_communis pycom08g15220
rosa_chinensis RchiOBHm_Chr7g0239951
rosa_laevigata RLG00000000715
rosa_multiflora Rmu_sc0000540.1_g000022 Rmu_sc0006825.1_g000001 Rmu_sc0035965.1_g000001
rosa_roxburghii Rroxscaffold_3G00220600
rosa_rugosa Rorug07G0331400
rosa_samantha Rh7AG485100 Rh7BG458100 Rh7CG502400 Rh7DG470700
rosa_wichuraiana Rw7G040690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 444
AccB7I CCANNNNNTGG 2 cut(s) 698, 1141
AccBSI CCGCTC 1 cut(s) 1066
AccI GTMKAC 1 cut(s) 495
AccII CGCG 5 cut(s) 278, 290, 326, 359, 378
AclWI GGATC 3 cut(s) 341, 1009, 1012
AcoI YGGCCR 4 cut(s) 291, 363, 373, 1336
AcsI RAATTY 2 cut(s) 1178, 1284
AcuI CTGAAG 1 cut(s) 906
AcvI CACGTG 1 cut(s) 542
AcyI GRCGYC 1 cut(s) 465
AfiI CCNNNNNNNGG 3 cut(s) 358, 698, 1141
AflIII ACRYGT 1 cut(s) 539
AgsI TTSAA 7 cut(s) 106, 563, 785, 1008, 1073, 1093, 1264
AhlI ACTAGT 1 cut(s) 443
AjnI CCWGG 1 cut(s) 637
AluBI AGCT 9 cut(s) 239, 417, 509, 559, 605, 617, 743, 1231, 1322
AluI AGCT 9 cut(s) 239, 417, 509, 559, 605, 617, 743, 1231, 1322
Alw21I GWGCWC 3 cut(s) 284, 419, 934
Alw26I GTCTC 3 cut(s) 222, 1175, 1210
AlwI GGATC 3 cut(s) 341, 1009, 1012
AlwNI CAGNNNCTG 1 cut(s) 214
Ama87I CYCGRG 1 cut(s) 771
ApaI GGGCCC 1 cut(s) 317
ApeKI GCWGC 5 cut(s) 214, 239, 265, 1228, 1322
ApoI RAATTY 2 cut(s) 1178, 1284
ArsI GACNNNNNNTTYG 4 cut(s) 450, 482, 1294, 1326
AspLEI GCGC 2 cut(s) 278, 326
AspS9I GGNCC 9 cut(s) 255, 313, 314, 350, 475, 523, 685, 765, 1330
AsuC2I CCSGG 2 cut(s) 321, 593
AsuHPI GGTGA 2 cut(s) 9, 160
AvaI CYCGRG 1 cut(s) 771
AvaII GGWCC 3 cut(s) 255, 475, 765
BaeGI GKGCMC 1 cut(s) 317
BalI TGGCCA 1 cut(s) 1338
BanII GRGCYC 2 cut(s) 317, 419
BbrPI CACGTG 1 cut(s) 542
BbsI GAAGAC 2 cut(s) 960, 1359
Bbv12I GWGCWC 3 cut(s) 284, 419, 934
BbvI GCAGC 5 cut(s) 201, 226, 277, 1240, 1309
BccI CCATC 2 cut(s) 932, 1124
BceAI ACGGC 4 cut(s) 350, 478, 499, 672
BcgI CGANNNNNNTGC 4 cut(s) 221, 255, 475, 509
BciT130I CCWGG 1 cut(s) 639
BcnI CCSGG 2 cut(s) 321, 593
BcoDI GTCTC 3 cut(s) 222, 1175, 1210
BcuI ACTAGT 1 cut(s) 443
BfaI CTAG 2 cut(s) 245, 444
BfmI CTRYAG 3 cut(s) 744, 1185, 1272
BglI GCCNNNNNGGC 1 cut(s) 321
BlpI GCTNAGC 1 cut(s) 426
Bme1390I CCNGG 3 cut(s) 321, 593, 639
Bme18I GGWCC 3 cut(s) 255, 475, 765
BmeT110I CYCGRG 1 cut(s) 771
BmgT120I GGNCC 9 cut(s) 255, 313, 314, 350, 475, 523, 685, 765, 1330
BmiI GGNNCC 8 cut(s) 256, 257, 314, 315, 477, 525, 636, 766
BmrFI CCNGG 3 cut(s) 321, 593, 639
BmsI GCATC 1 cut(s) 846
BpiI GAAGAC 2 cut(s) 960, 1359
BpmI CTGGAG 2 cut(s) 639, 964
Bpu1102I GCTNAGC 1 cut(s) 426
BpuEI CTTGAG 1 cut(s) 561
BpuMI CCSGG 2 cut(s) 321, 593
BsaAI YACGTR 1 cut(s) 542
BsaHI GRCGYC 1 cut(s) 465
BsaI GGTCTC 1 cut(s) 1175
BsaJI CCNNGG 5 cut(s) 357, 431, 568, 638, 1333
Bsc4I CCNNNNNNNGG 3 cut(s) 358, 698, 1141
Bse1I ACTGG 3 cut(s) 789, 1003, 1126
Bse3DI GCAATG 2 cut(s) 493, 1332
BseBI CCWGG 1 cut(s) 639
BseDI CCNNGG 5 cut(s) 357, 431, 568, 638, 1333
BseGI GGATG 1 cut(s) 781
BseLI CCNNNNNNNGG 3 cut(s) 358, 698, 1141
BseMI GCAATG 2 cut(s) 493, 1332
BseMII CTCAG 2 cut(s) 417, 726
BseNI ACTGG 3 cut(s) 789, 1003, 1126
BseRI GAGGAG 4 cut(s) 104, 704, 1292, 1379
BseSI GKGCMC 1 cut(s) 317
BseX3I CGGCCG 1 cut(s) 373
BseXI GCAGC 5 cut(s) 201, 226, 277, 1240, 1309
BseYI CCCAGC 2 cut(s) 258, 761
Bsh1236I CGCG 5 cut(s) 278, 290, 326, 359, 378
Bsh1285I CGRYCG 1 cut(s) 376
BsiEI CGRYCG 1 cut(s) 376
BsiHKAI GWGCWC 3 cut(s) 284, 419, 934
BsiHKCI CYCGRG 1 cut(s) 771
BsiSI CCGG 4 cut(s) 269, 321, 348, 592
BslFI GGGAC 4 cut(s) 241, 586, 656, 778
BslI CCNNNNNNNGG 3 cut(s) 358, 698, 1141
BsmAI GTCTC 3 cut(s) 222, 1175, 1210
BsmBI CGTCTC 1 cut(s) 222
BsmFI GGGAC 4 cut(s) 241, 586, 656, 778
Bso31I GGTCTC 1 cut(s) 1175
BsoBI CYCGRG 1 cut(s) 771
Bsp120I GGGCCC 1 cut(s) 313
Bsp1286I GDGCHC 4 cut(s) 284, 317, 419, 934
Bsp143I GATC 4 cut(s) 333, 530, 1001, 1017
Bsp1720I GCTNAGC 1 cut(s) 426
Bsp19I CCATGG 2 cut(s) 431, 568
BspCNI CTCAG 2 cut(s) 418, 727
BspFNI CGCG 5 cut(s) 278, 290, 326, 359, 378
BspLI GGNNCC 8 cut(s) 256, 257, 314, 315, 477, 525, 636, 766
BspMAI CTGCAG 1 cut(s) 1189
BspPI GGATC 3 cut(s) 341, 1009, 1012
BspTNI GGTCTC 1 cut(s) 1175
BsrBI CCGCTC 1 cut(s) 1066
BsrDI GCAATG 2 cut(s) 493, 1332
BsrI ACTGG 3 cut(s) 789, 1003, 1126
BssECI CCNNGG 5 cut(s) 357, 431, 568, 638, 1333
BssMI GATC 4 cut(s) 333, 530, 1001, 1017
BssNI GRCGYC 1 cut(s) 465
BssT1I CCWWGG 3 cut(s) 431, 568, 1333
Bst2UI CCWGG 1 cut(s) 639
Bst4CI ACNGT 2 cut(s) 799, 1207
Bst6I CTCTTC 1 cut(s) 181
BstACI GRCGYC 1 cut(s) 465
BstAPI GCANNNNNTGC 3 cut(s) 629, 929, 1395
BstBAI YACGTR 1 cut(s) 542
BstC8I GCNNGC 5 cut(s) 237, 280, 630, 835, 1226
BstDEI CTNAG 3 cut(s) 426, 599, 735
BstDSI CCRYGG 3 cut(s) 357, 431, 568
BstF5I GGATG 1 cut(s) 781
BstFNI CGCG 5 cut(s) 278, 290, 326, 359, 378
BstHHI GCGC 2 cut(s) 278, 326
BstKTI GATC 4 cut(s) 336, 533, 1004, 1020
BstMAI GTCTC 3 cut(s) 222, 1175, 1210
BstMBI GATC 4 cut(s) 333, 530, 1001, 1017
BstMCI CGRYCG 1 cut(s) 376
BstMWI GCNNNNNNNGC 6 cut(s) 321, 629, 902, 929, 1328, 1395
BstNI CCWGG 1 cut(s) 639
BstNSI RCATGY 1 cut(s) 1103
BstSCI CCNGG 3 cut(s) 319, 591, 637
BstSFI CTRYAG 3 cut(s) 744, 1185, 1272
BstSLI GKGCMC 1 cut(s) 317
BstUI CGCG 5 cut(s) 278, 290, 326, 359, 378
BstV1I GCAGC 5 cut(s) 201, 226, 277, 1240, 1309
BstV2I GAAGAC 2 cut(s) 960, 1359
BstX2I RGATCY 1 cut(s) 1001
BstXI CCANNNNNNTGG 1 cut(s) 1346
BstYI RGATCY 1 cut(s) 1001
BstZI CGGCCG 1 cut(s) 373
BtgI CCRYGG 3 cut(s) 357, 431, 568
BtsCI GGATG 1 cut(s) 781
BtsI GCAGTG 1 cut(s) 157
BtsIMutI CAGTG 3 cut(s) 157, 849, 1119
Cac8I GCNNGC 5 cut(s) 237, 280, 630, 835, 1226
CaiI CAGNNNCTG 1 cut(s) 214
CfoI GCGC 2 cut(s) 278, 326
Cfr13I GGNCC 9 cut(s) 255, 313, 314, 350, 475, 523, 685, 765, 1330
Cfr42I CCGCGG 1 cut(s) 360
CseI GACGC 2 cut(s) 220, 454
CviAII CATG 5 cut(s) 432, 449, 569, 723, 1100
DdeI CTNAG 3 cut(s) 426, 599, 735
DpnI GATC 4 cut(s) 335, 532, 1003, 1019
DpnII GATC 4 cut(s) 333, 530, 1001, 1017
DrdI GACNNNNNNGTC 1 cut(s) 444
DseDI GACNNNNNNGTC 1 cut(s) 444
EaeI YGGCCR 4 cut(s) 291, 363, 373, 1336
EagI CGGCCG 1 cut(s) 373
Eam1104I CTCTTC 1 cut(s) 181
EarI CTCTTC 1 cut(s) 181
EciI GGCGGA 1 cut(s) 113
Ecl136II GAGCTC 1 cut(s) 417
EclXI CGGCCG 1 cut(s) 373
Eco130I CCWWGG 3 cut(s) 431, 568, 1333
Eco147I AGGCCT 1 cut(s) 52
Eco24I GRGCYC 2 cut(s) 317, 419
Eco31I GGTCTC 1 cut(s) 1175
Eco47I GGWCC 3 cut(s) 255, 475, 765
Eco52I CGGCCG 1 cut(s) 373
Eco53kI GAGCTC 1 cut(s) 417
Eco57I CTGAAG 1 cut(s) 906
Eco72I CACGTG 1 cut(s) 542
Eco88I CYCGRG 1 cut(s) 771
EcoICRI GAGCTC 1 cut(s) 417
EcoO109I RGGNCCY 2 cut(s) 255, 313
EcoRII CCWGG 1 cut(s) 637
EcoT14I CCWWGG 3 cut(s) 431, 568, 1333
EcoT22I ATGCAT 1 cut(s) 724
EcoT38I GRGCYC 2 cut(s) 317, 419
ErhI CCWWGG 3 cut(s) 431, 568, 1333
Esp3I CGTCTC 1 cut(s) 222
FaeI CATG 5 cut(s) 435, 452, 572, 726, 1103
FalI AAGNNNNNCTT 4 cut(s) 1088, 1120, 1236, 1268
FaqI GGGAC 4 cut(s) 241, 586, 656, 778
FatI CATG 5 cut(s) 431, 448, 568, 722, 1099
FauI CCCGC 1 cut(s) 1059
FblI GTMKAC 1 cut(s) 495
FokI GGATG 1 cut(s) 788
FriOI GRGCYC 2 cut(s) 317, 419
FspBI CTAG 2 cut(s) 245, 444
GlaI GCGC 2 cut(s) 277, 325
GsaI CCCAGC 2 cut(s) 262, 765
GsuI CTGGAG 2 cut(s) 639, 964
HapII CCGG 4 cut(s) 269, 321, 348, 592
HgaI GACGC 2 cut(s) 220, 454
HhaI GCGC 2 cut(s) 278, 326
Hin1I GRCGYC 1 cut(s) 465
Hin1II CATG 5 cut(s) 435, 452, 572, 726, 1103
Hin6I GCGC 2 cut(s) 276, 324
HinP1I GCGC 2 cut(s) 276, 324
HincII GTYRAC 1 cut(s) 496
HindII GTYRAC 1 cut(s) 496
HinfI GANTC 7 cut(s) 191, 574, 946, 956, 975, 1131, 1192
HpaII CCGG 4 cut(s) 269, 321, 348, 592
HphI GGTGA 2 cut(s) 9, 160
Hpy166II GTNNAC 3 cut(s) 496, 1203, 1210
Hpy188I TCNGA 7 cut(s) 196, 390, 588, 886, 961, 1238, 1363
Hpy188III TCNNGA 8 cut(s) 670, 773, 824, 935, 950, 968, 1105, 1300
Hpy8I GTNNAC 3 cut(s) 496, 1203, 1210
Hpy99I CGWCG 5 cut(s) 371, 374, 470, 497, 500
HpyAV CCTTC 4 cut(s) 175, 830, 1141, 1191
HpyCH4III ACNGT 2 cut(s) 799, 1207
HpyCH4IV ACGT 1 cut(s) 541
HpyCH4V TGCA 5 cut(s) 722, 1187, 1256, 1325, 1398
HpyF10VI GCNNNNNNNGC 6 cut(s) 321, 629, 902, 929, 1328, 1395
HpyF3I CTNAG 3 cut(s) 426, 599, 735
HpySE526I ACGT 1 cut(s) 541
Hsp92I GRCGYC 1 cut(s) 465
Hsp92II CATG 5 cut(s) 435, 452, 572, 726, 1103
HspAI GCGC 2 cut(s) 276, 324
KflI GGGWCCC 1 cut(s) 255
KspI CCGCGG 1 cut(s) 360
Kzo9I GATC 4 cut(s) 333, 530, 1001, 1017
LmnI GCTCC 6 cut(s) 137, 167, 556, 620, 726, 1063
Lsp1109I GCAGC 5 cut(s) 201, 226, 277, 1240, 1309
LweI GCATC 1 cut(s) 846
MaeI CTAG 2 cut(s) 245, 444
MaeII ACGT 1 cut(s) 541
MaeIII GTNAC 4 cut(s) 298, 511, 748, 814
MalI GATC 4 cut(s) 335, 532, 1003, 1019
MbiI CCGCTC 1 cut(s) 1066
MboI GATC 4 cut(s) 333, 530, 1001, 1017
MboII GAAGA 5 cut(s) 168, 557, 965, 996, 1364
MflI RGATCY 1 cut(s) 1001
MhlI GDGCHC 4 cut(s) 284, 317, 419, 934
MlsI TGGCCA 1 cut(s) 1338
MluCI AATT 5 cut(s) 678, 867, 1026, 1178, 1284
MluNI TGGCCA 1 cut(s) 1338
MlyI GAGTC 5 cut(s) 185, 568, 950, 955, 1201
MmeI TCCRAC 1 cut(s) 219
Mox20I TGGCCA 1 cut(s) 1338
Mph1103I ATGCAT 1 cut(s) 724
MscI TGGCCA 1 cut(s) 1338
MseI TTAA 3 cut(s) 60, 801, 1029
MslI CAYNNNNRTG 1 cut(s) 917
Msp20I TGGCCA 1 cut(s) 1338
MspA1I CMGCKG 1 cut(s) 359
MspI CCGG 4 cut(s) 269, 321, 348, 592
MspR9I CCNGG 3 cut(s) 321, 593, 639
MvaI CCWGG 1 cut(s) 639
MvnI CGCG 5 cut(s) 278, 290, 326, 359, 378
MwoI GCNNNNNNNGC 6 cut(s) 321, 629, 902, 929, 1328, 1395
NciI CCSGG 2 cut(s) 321, 593
NcoI CCATGG 2 cut(s) 431, 568
NdeII GATC 4 cut(s) 333, 530, 1001, 1017
NlaIII CATG 5 cut(s) 435, 452, 572, 726, 1103
NlaIV GGNNCC 8 cut(s) 256, 257, 314, 315, 477, 525, 636, 766
NmeAIII GCCGAG 1 cut(s) 201
NmuCI GTSAC 2 cut(s) 298, 511
NsiI ATGCAT 1 cut(s) 724
NspI RCATGY 1 cut(s) 1103
PceI AGGCCT 1 cut(s) 52
PcsI WCGNNNNNNNCGW 5 cut(s) 192, 228, 375, 462, 489
PfeI GAWTC 2 cut(s) 975, 1131
PflMI CCANNNNNTGG 2 cut(s) 698, 1141
PleI GAGTC 5 cut(s) 185, 568, 950, 954, 1200
PmaCI CACGTG 1 cut(s) 542
PmlI CACGTG 1 cut(s) 542
PpsI GAGTC 5 cut(s) 185, 568, 950, 954, 1200
Ppu21I YACGTR 1 cut(s) 542
PpuMI RGGWCCY 1 cut(s) 255
Psp124BI GAGCTC 1 cut(s) 419
Psp5II RGGWCCY 1 cut(s) 255
Psp6I CCWGG 1 cut(s) 637
PspCI CACGTG 1 cut(s) 542
PspFI CCCAGC 2 cut(s) 258, 761
PspGI CCWGG 1 cut(s) 637
PspN4I GGNNCC 8 cut(s) 256, 257, 314, 315, 477, 525, 636, 766
PspOMI GGGCCC 1 cut(s) 313
PspPI GGNCC 9 cut(s) 255, 313, 314, 350, 475, 523, 685, 765, 1330
PspPPI RGGWCCY 1 cut(s) 255
PstI CTGCAG 1 cut(s) 1189
PstNI CAGNNNCTG 1 cut(s) 214
PsuI RGATCY 1 cut(s) 1001
RseI CAYNNNNRTG 1 cut(s) 917
SacI GAGCTC 1 cut(s) 419
SacII CCGCGG 1 cut(s) 360
SalI GTCGAC 1 cut(s) 494
SaqAI TTAA 3 cut(s) 60, 801, 1029
Sau3AI GATC 4 cut(s) 333, 530, 1001, 1017
Sau96I GGNCC 9 cut(s) 255, 313, 314, 350, 475, 523, 685, 765, 1330
SbfI CCTGCAGG 1 cut(s) 1189
SchI GAGTC 5 cut(s) 185, 568, 950, 955, 1201
ScrFI CCNGG 3 cut(s) 321, 593, 639
SdaI CCTGCAGG 1 cut(s) 1189
SduI GDGCHC 4 cut(s) 284, 317, 419, 934
SfaNI GCATC 1 cut(s) 846
SfcI CTRYAG 3 cut(s) 744, 1185, 1272
Sfr303I CCGCGG 1 cut(s) 360
SgrBI CCGCGG 1 cut(s) 360
SgrDI CGTCGACG 1 cut(s) 494
SinI GGWCC 3 cut(s) 255, 475, 765
SmiMI CAYNNNNRTG 1 cut(s) 917
SmlI CTYRAG 1 cut(s) 576
SmoI CTYRAG 1 cut(s) 576
SpeI ACTAGT 1 cut(s) 443
Sse8387I CCTGCAGG 1 cut(s) 1189
Sse9I AATT 5 cut(s) 678, 867, 1026, 1178, 1284
SseBI AGGCCT 1 cut(s) 52
SspI AATATT 2 cut(s) 1155, 1381
SspMI CTAG 2 cut(s) 245, 444
SstI GAGCTC 1 cut(s) 419
StuI AGGCCT 1 cut(s) 52
StyD4I CCNGG 3 cut(s) 319, 591, 637
StyI CCWWGG 3 cut(s) 431, 568, 1333
TaaI ACNGT 2 cut(s) 799, 1207
TaiI ACGT 1 cut(s) 544
TaqI TCGA 4 cut(s) 456, 495, 995, 1195
TasI AATT 5 cut(s) 678, 867, 1026, 1178, 1284
TauI GCSGC 5 cut(s) 98, 265, 293, 343, 378
TfiI GAWTC 2 cut(s) 975, 1131
Tru1I TTAA 3 cut(s) 60, 801, 1029
Tru9I TTAA 3 cut(s) 60, 801, 1029
TscAI CASTG 3 cut(s) 164, 856, 1126
TseFI GTSAC 2 cut(s) 298, 511
TseI GCWGC 5 cut(s) 214, 239, 265, 1228, 1322
Tsp45I GTSAC 2 cut(s) 298, 511
TspDTI ATGAA 1 cut(s) 1038
TspGWI ACGGA 1 cut(s) 374
TspRI CASTG 3 cut(s) 164, 856, 1126
Van91I CCANNNNNTGG 2 cut(s) 698, 1141
VpaK11BI GGWCC 3 cut(s) 255, 475, 765
XapI RAATTY 2 cut(s) 1178, 1284
XceI RCATGY 1 cut(s) 1103
XcmI CCANNNNNNNNNTGG 2 cut(s) 775, 856
XmiI GTMKAC 1 cut(s) 495
XspI CTAG 2 cut(s) 245, 444
Zsp2I ATGCAT 1 cut(s) 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.