Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005257

Physical Location & Seq

Genomic Coordinates Reverse (-)

1353586 .. 1358134

Gene Structure 4549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g02340.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGGTGAATGATAGTCACTTGGGTGTAATGTTGAGAGCAGTAGCTATTGGGTTGTTAGTTTCCTATCTAGTGGTATCTGTTTCAGCCAATGATAGTGAATTTGCGAGTTGTAATTGTGATGATGAGGGTTCTTGGAGCATTCAGAGTATTTTGGAGTGTCAGAGACTTAGTGATTTCATGATTGCTATAGCGTATTTTTCGATCCCTATAGAGCTCATTTACTTTGTCAGCTGCTCAAACTTTCCATTCAAATGGGTCCTCCTTCAGTTCATCGCGTTTATAGTCCTCTGTGGATTGACCCATTTGCTCAATGCCTGGACTTATTATGGCCCTCATACTACTCACTCGTTCCAATTGATGCTTGCCCTCACCATTACCAAACTCCTCACGGCCTTGGTCTCGTGTGCAACTGCAATAACCCTATTAACTCTTTTCCCTCTTATTCTGAAAGTCAAAGTAAGAGAGTTGTTCTTGAGGCAGAATGTGTTGGAGTTAGACCAAGAGATTGGGATGATGAAGATACAGAAGGAAGCGAGTTGGCATGTTCGAATGCTGACCCAGGAAATTAGGAAGTCACTCGATAAGCATAACATTTTGTATACAACGCTGGTTGAGCTTTCAAAGACATTGGACTTGCATAACTGTGCAGTTTGGATGCCTAATGAGAACAGGACAGAGTTGAACCTGACTCATGAGTTGAAAGGGAGTTCTTCGAGAAATTATAGTCATTCTATTCCAATGAATGACCCAAATGTGTTGGAGATCAGAGAGAGCAACAGAGTAAGAATCCTGAGGCCTGATTCTGCACTTGGAGCTGCAAGTTGTGGTGGTTCTAGTGAATGTGGTGCTGTAGCAGCAATCCGGATGCCAATGCTTCGAAATTCAAATTTCAAAGGGGGTACACCACAGTTAGTTGATACTCCTTACGCTATATTGGTTTTGGTTCTTCCGATGTCAGATTCTAGAGTTTGGAGCTATCATGAAATGGAGATAGTGGAAGTTGTGGCTGACCAGGTTGCAGTGGCACTGTCCCACGCTGCAGTACTTGAAGAGTCTCAACTAATGAGAGAGAAACTGAGAGAACAAAATCGTGCACTACAGCAGGCTCAGAAGAATGCAATGATGGCCAGCCAAGCAAGATACTCATTTCAGAAGGTGATGAGTAATGGAATGAGAAGGCCGATGCATTCCATTTTGGGGTTGCTGTCAACATTTCAAGAGAGTATGAGTTTGAAACAAAGGATTATTGTAGACACTATGGTTAAAACTAGCTATGTTCTCTCCACTTTGATAAATGATGTCATGGAGATGTCAGCAAAAGATAATGGAAGGTTCCCTCTGGAGATGAGGCCTTTTCAACTTCACTCCATGATCAAAGAAGCTTCTTGCCTCGCCAAGTGCTTGTCTGTGTATAAAGGCTTTAGGTTTGAAGTTGATGTTCAGAGCTCATTGCCTAATCAGGTGATGGGGGACGAAAGAAGGGCTTTCCAAGTAATCTTGCATATGGTTGGATATCTTTTGAGCACCTATAAGGGAGGAGGAACTGTCATCTTTCGGGCTATTCTAGAGAGTGGTTCTGAGACCCCGGATGATAAATTGCAACAGATGTGGAGAACAGGTACACCAGATGAGTACGTATCTGTGAGGTTCGAATTGGAGATTAATGACGGAACTTCTCATTCCAGTGGAGTATCATCGATGATTGATTACGGTGGTAGGAGGAACAACAGCAGTGAAATAAAGAAGGGCCTGAGCTTCAACATTTGCAAAAAGATTGTCCAGATGATGCAAGGCAATATCTGGATATCCATGAATCCGATCAATCTCGCAGAAAGCATGACACTTGTTCTCAGGTTTCAAATCCTTCCTTCTTTAGGGAGAGGAAATCCATTGGAGCAACCAAATTCCAACTCAGAGTTCAGAGGACTCCGGGTTGTAGTAGCGGACGATGATAATGTAAACAGGACCGTGACCACAAAGCTGCTCCAGAAACTTGGCTGTCAAGTCAGTGCTGTTTCTTCGGGGTTTGAATGCCTGAGTACCCTTAGTAGTGCCGAAAGTCCTTTCCAGGTTGTTGTTCTGGATCTTCACATGCCTGAAATGGATGGATTCGAAGTGGCAATGAGAATCAGGAAATTCCACAACCCTAGTTGGCCGCTGATCATAGCCCTGACCGCAAGTGCGGAGGAAGATGTGTGGGAGAAATGTCTACAGATGGGAATGAACGGACTGATCCGAAAACCTGTCATTTTGCAAGGGATGTCAAACGAGCTCCGGAGAGTAATGCAACGAGCCGGTGAAGGTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009968 GO:0009987 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0012505 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0023057 GO:0036211 GO:0042562 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051740 GO:0065007 GO:0070297 GO:0070298 GO:0071704 GO:0072328 GO:0140096 GO:1901564 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

GAF HATPase_c HisKA Response_reg

Protein Analysis

770

Amino Acids

86.31

Weight (kDa)

6.8

Isoelectric Point (pI)

43.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ETR1_N	PF25487	50 - 151	6.7e-40	Ethylene receptor 1-like, N-terminal domain
GAF	PF01590	196 - 343	2.8e-10	GAF domain
HisKA	PF00512	382 - 443	9.6e-06	His Kinase A (phospho-acceptor) domain
Response_reg	PF00072	645 - 752	1.4e-21	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04580 AT3G04580
fragaria_vesca	FvH4_3g14281 FvH4_5g22480 FvH4_6g02340
malus_domestica	MD00G1114300.v1.1 MD12G1245100.v1.1
prunus_persica	Prupe.6G348000_v2.0.a1
pyrus_communis	pycom04g20230 pycom04g20240 pycom12g22480
rosa_chinensis	RchiOBHm_Chr3g0450101 RchiOBHm_Chr6g0274471
rosa_laevigata	RLG00000008654 RLG00000025756
rosa_multiflora	Rmu_sc0018882.1_g000003 Rmu_sc0035048.1_g000001 Rmu_sc0035049.1_g000001
rosa_roxburghii	Rroxscaffold_2G00117790 Rroxscaffold_3G00276360 Rroxscaffold_7G00200060
rosa_rugosa	Rorug02G0625400 Rorug02G0625500 Rorug04G0237900
rosa_samantha	Rh3AG024700 Rh3BG025300 Rh3CG024200 Rh3DG025300
rosa_wichuraiana	Rw3G001970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	599, 1251, 2209
AccII	CGCG	1 cut(s)	275
AccIII	TCCGGA	2 cut(s)	861, 2274
AciI	CCGC	4 cut(s)	1943, 2156, 2175, 2183
AclWI	GGATC	3 cut(s)	196, 2091, 2227
AcoI	YGGCCR	2 cut(s)	1125, 2153
AcsI	RAATTY	5 cut(s)	98, 880, 886, 1903, 2135
AcuI	CTGAAG	1 cut(s)	248
AfaI	GTAC	5 cut(s)	901, 1044, 1621, 1634, 2041
AfiI	CCNNNNNNNGG	2 cut(s)	1197, 1874
AjnI	CCWGG	4 cut(s)	314, 558, 1011, 2067
AjuI	GAANNNNNNNTTGG	2 cut(s)	1901, 1933
AleI	CACNNNNGTG	1 cut(s)	21
Alw21I	GWGCWC	5 cut(s)	216, 1096, 1448, 1526, 2274
Alw26I	GTCTC	4 cut(s)	157, 403, 1059, 1574
Alw44I	GTGCAC	1 cut(s)	1092
AlwI	GGATC	3 cut(s)	196, 2091, 2227
Aor13HI	TCCGGA	2 cut(s)	861, 2274
AoxI	GGCC	8 cut(s)	328, 390, 794, 1125, 1178, 1349, 1747, 2153
ApaLI	GTGCAC	1 cut(s)	1092
ApeKI	GCWGC	5 cut(s)	231, 815, 854, 1037, 1981
ApoI	RAATTY	5 cut(s)	98, 880, 886, 1903, 2135
ArsI	GACNNNNNNTTYG	2 cut(s)	1761, 1793
AseI	ATTAAT	1 cut(s)	1662
AspS9I	GGNCC	4 cut(s)	256, 329, 1747, 1965
AsuC2I	CCSGG	2 cut(s)	1586, 1931
AsuHPI	GGTGA	5 cut(s)	16, 361, 1168, 1474, 2309
AsuII	TTCGAA	4 cut(s)	547, 877, 1650, 2112
AvaII	GGWCC	2 cut(s)	256, 1965
AxyI	CCTNAGG	1 cut(s)	791
BaeGI	GKGCMC	1 cut(s)	1096
BalI	TGGCCA	1 cut(s)	1127
BanII	GRGCYC	3 cut(s)	216, 1448, 2274
BauI	CACGAG	1 cut(s)	400
Bbv12I	GWGCWC	5 cut(s)	216, 1096, 1448, 1526, 2274
BbvI	GCAGC	5 cut(s)	218, 802, 866, 1024, 1968
BccI	CCATC	4 cut(s)	1117, 1459, 2099, 2209
BceAI	ACGGC	1 cut(s)	405
BciT130I	CCWGG	4 cut(s)	316, 560, 1013, 2069
BclI	TGATCA	2 cut(s)	1371, 2160
BcnI	CCSGG	2 cut(s)	1586, 1931
BcoDI	GTCTC	4 cut(s)	157, 403, 1059, 1574
BfaI	CTAG	6 cut(s)	68, 834, 963, 1269, 1565, 2148
BfmI	CTRYAG	6 cut(s)	186, 207, 849, 1038, 1097, 2210
BisI	GCNGC	6 cut(s)	232, 816, 855, 1038, 1982, 2156
BlsI	GCNGC	6 cut(s)	233, 817, 856, 1039, 1983, 2157
BmcAI	AGTACT	1 cut(s)	1044
Bme1390I	CCNGG	6 cut(s)	316, 560, 1013, 1586, 1931, 2069
Bme18I	GGWCC	2 cut(s)	256, 1965
BmgT120I	GGNCC	4 cut(s)	256, 329, 1747, 1965
BmiI	GGNNCC	2 cut(s)	257, 1334
BmrFI	CCNGG	6 cut(s)	316, 560, 1013, 1586, 1931, 2069
BmsI	GCATC	5 cut(s)	348, 645, 855, 1173, 1776
BpmI	CTGGAG	2 cut(s)	1361, 1970
Bpu10I	CCTNAGC	1 cut(s)	1751
Bpu14I	TTCGAA	4 cut(s)	547, 877, 1650, 2112
BpuEI	CTTGAG	1 cut(s)	493
BpuMI	CCSGG	2 cut(s)	1586, 1931
Bsa29I	ATCGAT	1 cut(s)	1697
BsaAI	YACGTR	1 cut(s)	1636
BsaI	GGTCTC	2 cut(s)	403, 1574
BsaJI	CCNNGG	3 cut(s)	393, 558, 1584
BsaWI	WCCGGW	2 cut(s)	861, 2274
BsaXI	ACNNNNNCTCC	4 cut(s)	1530, 1560, 1603, 1633
Bsc4I	CCNNNNNNNGG	2 cut(s)	1197, 1874
Bse118I	RCCGGY	1 cut(s)	2294
Bse1I	ACTGG	1 cut(s)	1683
Bse21I	CCTNAGG	1 cut(s)	791
Bse3DI	GCAATG	3 cut(s)	1125, 1448, 2127
BseAI	TCCGGA	2 cut(s)	861, 2274
BseBI	CCWGG	4 cut(s)	316, 560, 1013, 2069
BseCI	ATCGAT	1 cut(s)	1697
BseDI	CCNNGG	3 cut(s)	393, 558, 1584
BseGI	GGATG	6 cut(s)	516, 660, 870, 1594, 2110, 2265
BseLI	CCNNNNNNNGG	2 cut(s)	1197, 1874
BseMI	GCAATG	3 cut(s)	1125, 1448, 2127
BseMII	CTCAG	8 cut(s)	782, 1067, 1121, 1569, 1742, 1864, 1926, 2027
BseNI	ACTGG	1 cut(s)	1683
BseRI	GAGGAG	2 cut(s)	374, 1551
BseSI	GKGCMC	1 cut(s)	1096
BseXI	GCAGC	5 cut(s)	218, 802, 866, 1024, 1968
BsgI	GTGCAG	2 cut(s)	666, 789
Bsh1236I	CGCG	1 cut(s)	275
BshFI	GGCC	8 cut(s)	330, 392, 796, 1127, 1180, 1351, 1749, 2155
BshVI	ATCGAT	1 cut(s)	1697
BsiHKAI	GWGCWC	5 cut(s)	216, 1096, 1448, 1526, 2274
BsiSI	CCGG	5 cut(s)	862, 1586, 1930, 2275, 2295
BslFI	GGGAC	2 cut(s)	1015, 1484
BslI	CCNNNNNNNGG	2 cut(s)	1197, 1874
BsmAI	GTCTC	4 cut(s)	157, 403, 1059, 1574
BsmFI	GGGAC	2 cut(s)	1015, 1484
BsmI	GAATGC	5 cut(s)	138, 555, 1120, 1186, 2036
BsnI	GGCC	8 cut(s)	330, 392, 796, 1127, 1180, 1351, 1749, 2155
Bso31I	GGTCTC	2 cut(s)	403, 1574
Bsp119I	TTCGAA	4 cut(s)	547, 877, 1650, 2112
Bsp1286I	GDGCHC	5 cut(s)	216, 1096, 1448, 1526, 2274
Bsp13I	TCCGGA	2 cut(s)	861, 2274
Bsp143I	GATC	7 cut(s)	201, 762, 1371, 1818, 2083, 2160, 2232
BspACI	CCGC	4 cut(s)	1943, 2156, 2175, 2183
BspANI	GGCC	8 cut(s)	330, 392, 796, 1127, 1180, 1351, 1749, 2155
BspCNI	CTCAG	8 cut(s)	783, 1068, 1120, 1570, 1743, 1863, 1925, 2028
BspDI	ATCGAT	1 cut(s)	1697
BspEI	TCCGGA	2 cut(s)	861, 2274
BspFNI	CGCG	1 cut(s)	275
BspHI	TCATGA	3 cut(s)	177, 691, 979
BspLI	GGNNCC	2 cut(s)	257, 1334
BspMAI	CTGCAG	1 cut(s)	1042
BspPI	GGATC	3 cut(s)	196, 2091, 2227
BspT104I	TTCGAA	4 cut(s)	547, 877, 1650, 2112
BspTNI	GGTCTC	2 cut(s)	403, 1574
BsrDI	GCAATG	3 cut(s)	1125, 1448, 2127
BsrFI	RCCGGY	1 cut(s)	2294
BsrI	ACTGG	1 cut(s)	1683
BssAI	RCCGGY	1 cut(s)	2294
BssECI	CCNNGG	3 cut(s)	393, 558, 1584
BssMI	GATC	7 cut(s)	201, 762, 1371, 1818, 2083, 2160, 2232
BssNAI	GTATAC	1 cut(s)	600
BssSI	CACGAG	1 cut(s)	400
BssT1I	CCWWGG	1 cut(s)	393
Bst1107I	GTATAC	1 cut(s)	600
Bst2BI	CACGAG	1 cut(s)	400
Bst2UI	CCWGG	4 cut(s)	316, 560, 1013, 2069
Bst4CI	ACNGT	6 cut(s)	644, 909, 1029, 1546, 1712, 1969
Bst6I	CTCTTC	1 cut(s)	1044
BstBAI	YACGTR	1 cut(s)	1636
BstBI	TTCGAA	4 cut(s)	547, 877, 1650, 2112
BstC8I	GCNNGC	3 cut(s)	363, 1104, 1129
BstENI	CCTNNNNNAGG	1 cut(s)	1872
BstF5I	GGATG	6 cut(s)	516, 660, 870, 1594, 2110, 2265
BstFNI	CGCG	1 cut(s)	275
BstKTI	GATC	7 cut(s)	204, 765, 1374, 1821, 2086, 2163, 2235
BstMAI	GTCTC	4 cut(s)	157, 403, 1059, 1574
BstMBI	GATC	7 cut(s)	201, 762, 1371, 1818, 2083, 2160, 2232
BstMWI	GCNNNNNNNGC	6 cut(s)	613, 812, 854, 1124, 1133, 2174
BstNI	CCWGG	4 cut(s)	316, 560, 1013, 2069
BstNSI	RCATGY	2 cut(s)	545, 2095
BstSCI	CCNGG	6 cut(s)	314, 558, 1011, 1584, 1929, 2067
BstSFI	CTRYAG	6 cut(s)	186, 207, 849, 1038, 1097, 2210
BstSLI	GKGCMC	1 cut(s)	1096
BstSNI	TACGTA	1 cut(s)	1636
BstUI	CGCG	1 cut(s)	275
BstV1I	GCAGC	5 cut(s)	218, 802, 866, 1024, 1968
BstX2I	RGATCY	1 cut(s)	2083
BstXI	CCANNNNNNTGG	3 cut(s)	252, 506, 1994
BstYI	RGATCY	1 cut(s)	2083
BstZ17I	GTATAC	1 cut(s)	600
Bsu15I	ATCGAT	1 cut(s)	1697
Bsu36I	CCTNAGG	1 cut(s)	791
BsuRI	GGCC	8 cut(s)	330, 392, 796, 1127, 1180, 1351, 1749, 2155
BsuTUI	ATCGAT	1 cut(s)	1697
BtgZI	GCGATG	1 cut(s)	256
BtsCI	GGATG	6 cut(s)	516, 660, 870, 1594, 2110, 2265
BtsI	GCAGTG	2 cut(s)	1026, 1738
BtsIMutI	CAGTG	5 cut(s)	1025, 1026, 1690, 1738, 2014
Cac8I	GCNNGC	3 cut(s)	363, 1104, 1129
CciI	TCATGA	3 cut(s)	177, 691, 979
Cfr10I	RCCGGY	1 cut(s)	2294
Cfr13I	GGNCC	4 cut(s)	256, 329, 1747, 1965
ClaI	ATCGAT	1 cut(s)	1697
CsiI	ACCWGGT	1 cut(s)	1011
Csp6I	GTAC	5 cut(s)	900, 1043, 1620, 1633, 2040
CspCI	CAANNNNNGTGG	2 cut(s)	1589, 1624
CviAII	CATG	9 cut(s)	178, 542, 692, 980, 1303, 1369, 1810, 1837, 2092
CviQI	GTAC	5 cut(s)	900, 1043, 1620, 1633, 2040
DpnI	GATC	7 cut(s)	203, 764, 1373, 1820, 2085, 2162, 2234
DpnII	GATC	7 cut(s)	201, 762, 1371, 1818, 2083, 2160, 2232
EaeI	YGGCCR	2 cut(s)	1125, 2153
Eam1104I	CTCTTC	1 cut(s)	1044
EarI	CTCTTC	1 cut(s)	1044
Ecl136II	GAGCTC	3 cut(s)	214, 1446, 2272
Eco105I	TACGTA	1 cut(s)	1636
Eco130I	CCWWGG	1 cut(s)	393
Eco147I	AGGCCT	2 cut(s)	796, 1351
Eco24I	GRGCYC	3 cut(s)	216, 1448, 2274
Eco31I	GGTCTC	2 cut(s)	403, 1574
Eco32I	GATATC	2 cut(s)	1514, 1806
Eco47I	GGWCC	2 cut(s)	256, 1965
Eco53kI	GAGCTC	3 cut(s)	214, 1446, 2272
Eco57I	CTGAAG	1 cut(s)	248
Eco81I	CCTNAGG	1 cut(s)	791
EcoICRI	GAGCTC	3 cut(s)	214, 1446, 2272
EcoNI	CCTNNNNNAGG	1 cut(s)	1872
EcoO109I	RGGNCCY	2 cut(s)	256, 1747
EcoRII	CCWGG	4 cut(s)	314, 558, 1011, 2067
EcoRV	GATATC	2 cut(s)	1514, 1806
EcoT14I	CCWWGG	1 cut(s)	393
EcoT22I	ATGCAT	1 cut(s)	1188
EcoT38I	GRGCYC	3 cut(s)	216, 1448, 2274
ErhI	CCWWGG	1 cut(s)	393
FaeI	CATG	9 cut(s)	181, 545, 695, 983, 1306, 1372, 1813, 1840, 2095
FalI	AAGNNNNNCTT	2 cut(s)	1468, 1500
FaqI	GGGAC	2 cut(s)	1015, 1484
FatI	CATG	9 cut(s)	177, 541, 691, 979, 1302, 1368, 1809, 1836, 2091
FauNDI	CATATG	1 cut(s)	1503
FbaI	TGATCA	2 cut(s)	1371, 2160
FblI	GTMKAC	3 cut(s)	599, 1251, 2209
Fnu4HI	GCNGC	6 cut(s)	232, 816, 855, 1038, 1982, 2156
FokI	GGATG	6 cut(s)	523, 667, 877, 1601, 2117, 2272
FriOI	GRGCYC	3 cut(s)	216, 1448, 2274
Fsp4HI	GCNGC	6 cut(s)	232, 816, 855, 1038, 1982, 2156
FspBI	CTAG	6 cut(s)	68, 834, 963, 1269, 1565, 2148
GluI	GCNGC	6 cut(s)	232, 816, 855, 1038, 1982, 2156
GsuI	CTGGAG	2 cut(s)	1361, 1970
HaeIII	GGCC	8 cut(s)	330, 392, 796, 1127, 1180, 1351, 1749, 2155
HapII	CCGG	5 cut(s)	862, 1586, 1930, 2275, 2295
Hin1II	CATG	9 cut(s)	181, 545, 695, 983, 1306, 1372, 1813, 1840, 2095
HincII	GTYRAC	1 cut(s)	1209
HindII	GTYRAC	1 cut(s)	1209
HindIII	AAGCTT	1 cut(s)	1380
HinfI	GANTC	9 cut(s)	688, 786, 800, 959, 1052, 1813, 1926, 2109, 2127
HpaII	CCGG	5 cut(s)	862, 1586, 1930, 2275, 2295
HphI	GGTGA	5 cut(s)	16, 361, 1168, 1474, 2309
Hpy166II	GTNNAC	8 cut(s)	600, 902, 1094, 1209, 1252, 1622, 1960, 2210
Hpy8I	GTNNAC	8 cut(s)	600, 902, 1094, 1209, 1252, 1622, 1960, 2210
HpyCH4III	ACNGT	6 cut(s)	644, 909, 1029, 1546, 1712, 1969
HpyCH4IV	ACGT	1 cut(s)	1635
HpyF10VI	GCNNNNNNNGC	6 cut(s)	613, 812, 854, 1124, 1133, 2174
HpySE526I	ACGT	1 cut(s)	1635
Hsp92II	CATG	9 cut(s)	181, 545, 695, 983, 1306, 1372, 1813, 1840, 2095
Kpn2I	TCCGGA	2 cut(s)	861, 2274
Ksp22I	TGATCA	2 cut(s)	1371, 2160
Kzo9I	GATC	7 cut(s)	201, 762, 1371, 1818, 2083, 2160, 2232
LmnI	GCTCC	6 cut(s)	135, 812, 972, 1894, 1989, 2277
Lsp1109I	GCAGC	5 cut(s)	218, 802, 866, 1024, 1968
LweI	GCATC	5 cut(s)	348, 645, 855, 1173, 1776
MabI	ACCWGGT	1 cut(s)	1011
MaeI	CTAG	6 cut(s)	68, 834, 963, 1269, 1565, 2148
MaeII	ACGT	1 cut(s)	1635
MaeIII	GTNAC	3 cut(s)	14, 573, 1969
MalI	GATC	7 cut(s)	203, 764, 1373, 1820, 2085, 2162, 2234
MboI	GATC	7 cut(s)	201, 762, 1371, 1818, 2083, 2160, 2232
MboII	GAAGA	8 cut(s)	529, 702, 938, 1061, 1123, 2010, 2078, 2201
MfeI	CAATTG	1 cut(s)	353
MflI	RGATCY	1 cut(s)	2083
MhlI	GDGCHC	5 cut(s)	216, 1096, 1448, 1526, 2274
MlsI	TGGCCA	1 cut(s)	1127
MluNI	TGGCCA	1 cut(s)	1127
MlyI	GAGTC	3 cut(s)	682, 1061, 1920
MmeI	TCCRAC	4 cut(s)	468, 738, 1489, 1932
Mox20I	TGGCCA	1 cut(s)	1127
Mph1103I	ATGCAT	1 cut(s)	1188
MroI	TCCGGA	2 cut(s)	861, 2274
MscI	TGGCCA	1 cut(s)	1127
MseI	TTAA	3 cut(s)	425, 1263, 1662
MslI	CAYNNNNRTG	5 cut(s)	21, 250, 642, 1307, 1683
Msp20I	TGGCCA	1 cut(s)	1127
MspA1I	CMGCKG	2 cut(s)	231, 2158
MspI	CCGG	5 cut(s)	862, 1586, 1930, 2275, 2295
MspR9I	CCNGG	6 cut(s)	316, 560, 1013, 1586, 1931, 2069
MunI	CAATTG	1 cut(s)	353
Mva1269I	GAATGC	5 cut(s)	138, 555, 1120, 1186, 2036
MvaI	CCWGG	4 cut(s)	316, 560, 1013, 2069
MvnI	CGCG	1 cut(s)	275
MwoI	GCNNNNNNNGC	6 cut(s)	613, 812, 854, 1124, 1133, 2174
NciI	CCSGG	2 cut(s)	1586, 1931
NdeI	CATATG	1 cut(s)	1503
NdeII	GATC	7 cut(s)	201, 762, 1371, 1818, 2083, 2160, 2232
NlaIII	CATG	9 cut(s)	181, 545, 695, 983, 1306, 1372, 1813, 1840, 2095
NlaIV	GGNNCC	2 cut(s)	257, 1334
NmuCI	GTSAC	3 cut(s)	14, 573, 1969
NsiI	ATGCAT	1 cut(s)	1188
NspI	RCATGY	2 cut(s)	545, 2095
NspV	TTCGAA	4 cut(s)	547, 877, 1650, 2112
OliI	CACNNNNGTG	1 cut(s)	21
PagI	TCATGA	3 cut(s)	177, 691, 979
PceI	AGGCCT	2 cut(s)	796, 1351
PctI	GAATGC	5 cut(s)	138, 555, 1120, 1186, 2036
PfeI	GAWTC	6 cut(s)	786, 800, 959, 1813, 2109, 2127
PkrI	GCNGC	6 cut(s)	233, 817, 856, 1039, 1983, 2157
PleI	GAGTC	3 cut(s)	682, 1060, 1920
PpsI	GAGTC	3 cut(s)	682, 1060, 1920
Ppu21I	YACGTR	1 cut(s)	1636
PpuMI	RGGWCCY	1 cut(s)	256
PshBI	ATTAAT	1 cut(s)	1662
Psp124BI	GAGCTC	3 cut(s)	216, 1448, 2274
Psp5II	RGGWCCY	1 cut(s)	256
Psp6I	CCWGG	4 cut(s)	314, 558, 1011, 2067
PspGI	CCWGG	4 cut(s)	314, 558, 1011, 2067
PspN4I	GGNNCC	2 cut(s)	257, 1334
PspPI	GGNCC	4 cut(s)	256, 329, 1747, 1965
PspPPI	RGGWCCY	1 cut(s)	256
PstI	CTGCAG	1 cut(s)	1042
PsuI	RGATCY	1 cut(s)	2083
PvuII	CAGCTG	1 cut(s)	231
RsaI	GTAC	5 cut(s)	901, 1044, 1621, 1634, 2041
RsaNI	GTAC	5 cut(s)	900, 1043, 1620, 1633, 2040
RseI	CAYNNNNRTG	5 cut(s)	21, 250, 642, 1307, 1683
SacI	GAGCTC	3 cut(s)	216, 1448, 2274
SaqAI	TTAA	3 cut(s)	425, 1263, 1662
SatI	GCNGC	6 cut(s)	232, 816, 855, 1038, 1982, 2156
Sau3AI	GATC	7 cut(s)	201, 762, 1371, 1818, 2083, 2160, 2232
Sau96I	GGNCC	4 cut(s)	256, 329, 1747, 1965
ScaI	AGTACT	1 cut(s)	1044
SchI	GAGTC	3 cut(s)	682, 1061, 1920
ScrFI	CCNGG	6 cut(s)	316, 560, 1013, 1586, 1931, 2069
SduI	GDGCHC	5 cut(s)	216, 1096, 1448, 1526, 2274
SexAI	ACCWGGT	1 cut(s)	1011
SfaNI	GCATC	5 cut(s)	348, 645, 855, 1173, 1776
SfcI	CTRYAG	6 cut(s)	186, 207, 849, 1038, 1097, 2210
SfuI	TTCGAA	4 cut(s)	547, 877, 1650, 2112
SinI	GGWCC	2 cut(s)	256, 1965
SmiMI	CAYNNNNRTG	5 cut(s)	21, 250, 642, 1307, 1683
SmlI	CTYRAG	1 cut(s)	472
SmoI	CTYRAG	1 cut(s)	472
SnaBI	TACGTA	1 cut(s)	1636
SseBI	AGGCCT	2 cut(s)	796, 1351
SsiI	CCGC	4 cut(s)	1943, 2156, 2175, 2183
SspMI	CTAG	6 cut(s)	68, 834, 963, 1269, 1565, 2148
SstI	GAGCTC	3 cut(s)	216, 1448, 2274
StuI	AGGCCT	2 cut(s)	796, 1351
StyD4I	CCNGG	6 cut(s)	314, 558, 1011, 1584, 1929, 2067
StyI	CCWWGG	1 cut(s)	393
TaaI	ACNGT	6 cut(s)	644, 909, 1029, 1546, 1712, 1969
TaiI	ACGT	1 cut(s)	1638
TaqI	TCGA	8 cut(s)	200, 547, 579, 713, 877, 1650, 1697, 2112
TatI	WGTACW	1 cut(s)	1042
TauI	GCSGC	1 cut(s)	2158
TfiI	GAWTC	6 cut(s)	786, 800, 959, 1813, 2109, 2127
Tru1I	TTAA	3 cut(s)	425, 1263, 1662
Tru9I	TTAA	3 cut(s)	425, 1263, 1662
TscAI	CASTG	5 cut(s)	1026, 1032, 1690, 1738, 2014
TseFI	GTSAC	3 cut(s)	14, 573, 1969
TseI	GCWGC	5 cut(s)	231, 815, 854, 1037, 1981
Tsp45I	GTSAC	3 cut(s)	14, 573, 1969
TspDTI	ATGAA	7 cut(s)	166, 259, 530, 755, 996, 1826, 2237
TspGWI	ACGGA	2 cut(s)	1683, 2241
TspRI	CASTG	5 cut(s)	1026, 1032, 1690, 1738, 2014
VneI	GTGCAC	1 cut(s)	1092
VpaK11BI	GGWCC	2 cut(s)	256, 1965
VspI	ATTAAT	1 cut(s)	1662
XagI	CCTNNNNNAGG	1 cut(s)	1872
XapI	RAATTY	5 cut(s)	98, 880, 886, 1903, 2135
XbaI	TCTAGA	2 cut(s)	962, 1564
XceI	RCATGY	2 cut(s)	545, 2095
XmiI	GTMKAC	3 cut(s)	599, 1251, 2209
XspI	CTAG	6 cut(s)	68, 834, 963, 1269, 1565, 2148
ZrmI	AGTACT	1 cut(s)	1044
Zsp2I	ATGCAT	1 cut(s)	1188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.