Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0018882.1

Orthogroup ID

OG0005257

Physical Location & Seq

Genomic Coordinates Reverse (-)

28568 .. 35414

Gene Structure 6847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0018882.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3444 bp

atggtgaatagtagtcacttggctgcaatgttgagagcagtagctcttgggttgttagtttcctgtttggctgtatctgtttcagccagtgataatgattttgtgaattgtaattgtgatgatgagggttcttggagcattcagagcattttagagtgtcaaagagtgagtgatttcttgattgcaatagcgtatttttcgatccctatagagctcctttattttgtcagctgctcaaactttccattcaaatgggtcctccttcagttcatcgcatttatagtcctttgtggattgacccatttgctcaatgcctggacttattatggccctcatagtgctcactctttccaattaatgcttgccctcaccatttccaaattcctcacggccttggtctcgtgtgcaactgcaataacccttttaactcttttccctcttattctgaaagtcaaagtaagagagttgttcttgaggcagaatgtgttggaattagaccaagaggttgggatgatgaaaataaagaaggaagcgagttggcatgtccgtatgctgacccaggaaattagaaagtcacttgataagcataacatattgtatacaactctggttgagctttcaaagacattggatttgcataactgtgcagtttggatgccgaatgagaacaggacagaaatgaacctgactcatgagttgaaagggagttcttcgagaaattatagtcgtactatcccaattaatgatccaaatgtgttggagataagagagagcaagagggtaagaatcctgaggcctgattccgcacttggagctgcaagtagtggtgagtctagtgaatgtggtgctgtagcagcaattcggatgccaatgcttagagtttcgaattttaaagggggtacaccacagttagttgatactccttatgctatattggttttggttcttccaatgtcagattctagagtttggacctatcatgaaatggagatagtggaagtcgtggctgaccaggttgcggtggctctatcccatgctgcagtacttgaagagtctcaactaatgagagagaaactgagagaacaaaatcgtgcactacaacaggctcagaagaatgcaatgatggccagccaagcaaggtactcatttcagaaggtaatgagtaatggaatgagaaggccgatgcattccattttgggtttgctgtcaacatttgagaatatgagtttgaaacagaggattattgtagatacgatggtaaaaactagctatgttctttccactttgataactgatgtcatggagatgtcagcaaaagataatggaaggttcccactagagatgaggccttttcagcttcactctatgatcaaagaagcttcttgccttgccaagtgcttgtgtgtgtacaaaggctttaggtttgaagttgatgttcagagctcattgcctaatcaggtgatgggggatgaaagaagggctttccaagtaatcttgcatatggttggatcacttctgagcacctataatggagagggaactgtcatctttcgggctgttctagagagtggttccgagagccaggatgataaattgcaacaaatgtggagaacaggtacgccagataagtatgtatctgtgaggttcgaatttgagattagtgacagaacctctcattccagtggggtattatcgatgattgattgtgctggtaggaggatcaacagcaatgaaattaagaagggcctgagcttcaacatttgcaaaaagattgtccagatgatgcaaggaaatatctggatgtccatgaatccaatcaatcttgcagaaagcatgactcttgttctcaggtttcaagtccttcattctgttggtagagctatgtatgtcgctggaaatctcttggagcaaccaaattccaactcagagttcagaggactccgagttgtagtagcggatgatgataatgtaaataggactgtgaccgctaaactgctccagaaacttggctgtcaagtcagtactgtttcttcagggtttgattgcctgagtacacttggcagtgcagaaaatccattccaggttgttgttttggatcttcacatgcctcaaatggatgggtttgaagtggcaatgagaatcaggaaattccacaaccctaactggccgctgatcatagccctgacagcaagtgcggaggaagctgtgtgggagaaatgtctacagatgggaatgaacggactgatccgaaaacctgttattttgaaagggatgtcggatgagcttcggagagtactgcaacgagccggtgaagtcatttatacccttctctatttacctgaccacgtaaaatcgaaaggacaaagtggacatttcggtcccgtttctgctcttaaacctcaatttgctaaagaatgtgaggggagagtgagcgacgccgtttcgcgccaaaccctaaccactaccggcgcaaaagcgcgggctctgtgttctcaaatcggtgaagacgagaagatgaagaaagcagaatacttcagcaaggactttgactgggacgagctgagagtcgaggtggaaaacgacccgtcgtttagctaccatttgctcccaatccaaccttctctttcagttgcagaacaaggtgaatctcaaccgtggaatgactttcatcaccgccattcatctgggaagttcttcaaggaaaggcgatatttgttgcaagaattccctgaactagttagctgtgaggagaattctagggttttggaggtggggtgtggcaatggcagcactgttcttccaatgttgaggggcaacgagaaagtcacggtttatgcatgtgattggagcactgaggcccttgagagggctaaggagacgatttatgcttctaacattgtttctatcgagcatcgtttccatacgttttgttgtgatttctctacctctgggtttccaacatggttgacctacaatccttgtcaagcaaattttgaacaaacttcagatggtagagggaatagtgaaacctgtcttaatgattcaagttcattgaaagaaagcagatgttgcattggtggggttgattttgttaccttgatattcacactgtcggcattatcacttcagaggatgccaaagtccatcaaggagtgtttttctgttatgagacctggaggcatgcttctatttagggattatggcctttatgacatgagcatgcttcggtttgagatggacaaaagagtgggattcagggagtatatgcgatcagatggaactcgttcttatttcttctcattggatactgtaagggatctatttatgggagcaggctttattgagcttgagcttgaatactgctgtgttaagtcgctgaatcgtcgaaatgggaagagcatgcgaagggtgtgggttcacggaaagttccaaaagcctgtatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009968 GO:0009987 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0012505 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0023057 GO:0036211 GO:0042562 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051740 GO:0065007 GO:0070297 GO:0070298 GO:0071704 GO:0072328 GO:0140096 GO:1901564 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

GAF HATPase_c HisKA Response_reg

Protein Analysis

1147

Amino Acids

129.56

Weight (kDa)

7.67

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04580 AT3G04580
fragaria_vesca	FvH4_3g14281 FvH4_5g22480 FvH4_6g02340
malus_domestica	MD00G1114300.v1.1 MD12G1245100.v1.1
prunus_persica	Prupe.6G348000_v2.0.a1
pyrus_communis	pycom04g20230 pycom04g20240 pycom12g22480
rosa_chinensis	RchiOBHm_Chr3g0450101 RchiOBHm_Chr6g0274471
rosa_laevigata	RLG00000008654 RLG00000025756
rosa_multiflora	Rmu_sc0018882.1_g000003 Rmu_sc0035048.1_g000001 Rmu_sc0035049.1_g000001
rosa_roxburghii	Rroxscaffold_2G00117790 Rroxscaffold_3G00276360 Rroxscaffold_7G00200060
rosa_rugosa	Rorug02G0625400 Rorug02G0625500 Rorug04G0237900
rosa_samantha	Rh3AG024700 Rh3BG025300 Rh3CG024200 Rh3DG025300
rosa_wichuraiana	Rw3G001970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2376
AccI	GTMKAC	2 cut(s)	599, 2221
AccII	CGCG	2 cut(s)	2446, 2479
AciI	CCGC	8 cut(s)	804, 1019, 1955, 1986, 2168, 2195, 2479, 2674
AclWI	GGATC	7 cut(s)	196, 740, 1516, 1727, 2103, 2239, 3324
AcoI	YGGCCR	2 cut(s)	1125, 2165
AcsI	RAATTY	8 cut(s)	380, 886, 1649, 1915, 2147, 2723, 2752, 2989
AcuI	CTGAAG	5 cut(s)	248, 2016, 2518, 2988, 3110
AcyI	GRCGYC	1 cut(s)	2436
AfaI	GTAC	9 cut(s)	730, 901, 1044, 1142, 1409, 1618, 2023, 2053, 2295
AfiI	CCNNNNNNNGG	3 cut(s)	1018, 2865, 2866
AhlI	ACTAGT	1 cut(s)	2734
AjnI	CCWGG	6 cut(s)	314, 558, 1011, 1581, 2079, 3172
AjuI	GAANNNNNNNTTGG	6 cut(s)	943, 975, 1913, 1945, 2602, 2634
Alw21I	GWGCWC	6 cut(s)	216, 343, 1096, 1445, 1523, 2852
Alw26I	GTCTC	4 cut(s)	403, 1059, 2870, 3163
Alw44I	GTGCAC	1 cut(s)	1092
AlwI	GGATC	7 cut(s)	196, 740, 1516, 1727, 2103, 2239, 3324
ApaLI	GTGCAC	1 cut(s)	1092
ApeKI	GCWGC	6 cut(s)	23, 231, 815, 854, 1037, 2787
ApoI	RAATTY	8 cut(s)	380, 886, 1649, 1915, 2147, 2723, 2752, 2989
ArsI	GACNNNNNNTTYG	4 cut(s)	616, 648, 1758, 1790
AseI	ATTAAT	2 cut(s)	356, 741
Asp700I	GAANNNNTTC	2 cut(s)	2693, 3283
AspLEI	GCGC	3 cut(s)	2448, 2471, 2479
AspS9I	GGNCC	6 cut(s)	256, 329, 972, 1744, 2378, 2857
AsuHPI	GGTGA	8 cut(s)	16, 361, 839, 1471, 2321, 2513, 2654, 2663
AsuII	TTCGAA	2 cut(s)	884, 1647
AvaII	GGWCC	3 cut(s)	256, 972, 2378
AxyI	CCTNAGG	1 cut(s)	791
BaeGI	GKGCMC	1 cut(s)	1096
BaeI	ACNNNNGTAYC	2 cut(s)	1242, 1275
BalI	TGGCCA	1 cut(s)	1127
BanII	GRGCYC	3 cut(s)	216, 1445, 2485
BarI	GAAGNNNNNNTAC	2 cut(s)	2014, 2046
BauI	CACGAG	1 cut(s)	400
BbsI	GAAGAC	1 cut(s)	2511
Bbv12I	GWGCWC	6 cut(s)	216, 343, 1096, 1445, 1523, 2852
BbvI	GCAGC	6 cut(s)	10, 218, 802, 866, 1024, 2799
BccI	CCATC	9 cut(s)	1117, 1249, 1456, 2111, 2221, 3002, 3152, 3229, 3269
BceAI	ACGGC	2 cut(s)	405, 2423
BciT130I	CCWGG	6 cut(s)	316, 560, 1013, 1583, 2081, 3174
BciVI	GTATCC	1 cut(s)	3298
BclI	TGATCA	2 cut(s)	1368, 2172
BcoDI	GTCTC	4 cut(s)	403, 1059, 2870, 3163
BcuI	ACTAGT	1 cut(s)	2734
BfaI	CTAG	7 cut(s)	834, 963, 1266, 1337, 1562, 2735, 2757
BfmI	CTRYAG	4 cut(s)	207, 849, 1038, 2222
BfuI	GTATCC	1 cut(s)	3298
BisI	GCNGC	7 cut(s)	24, 232, 816, 855, 1038, 2168, 2788
BlsI	GCNGC	7 cut(s)	25, 233, 817, 856, 1039, 2169, 2789
BmcAI	AGTACT	3 cut(s)	1044, 2023, 2295
Bme1390I	CCNGG	6 cut(s)	316, 560, 1013, 1583, 2081, 3174
Bme18I	GGWCC	3 cut(s)	256, 972, 2378
BmgT120I	GGNCC	6 cut(s)	256, 329, 972, 1744, 2378, 2857
BmiI	GGNNCC	4 cut(s)	257, 1331, 1573, 2380
BmrFI	CCNGG	6 cut(s)	316, 560, 1013, 1583, 2081, 3174
BmrI	ACTGGG	1 cut(s)	2560
BmsI	GCATC	6 cut(s)	645, 855, 1173, 1773, 2920, 3123
BmuI	ACTGGG	1 cut(s)	2560
BpiI	GAAGAC	1 cut(s)	2511
BpmI	CTGGAG	2 cut(s)	1982, 3195
Bpu10I	CCTNAGC	2 cut(s)	1748, 2871
Bpu14I	TTCGAA	2 cut(s)	884, 1647
BpuEI	CTTGAG	3 cut(s)	493, 2882, 3368
Bsa29I	ATCGAT	1 cut(s)	1694
BsaAI	YACGTR	1 cut(s)	2347
BsaHI	GRCGYC	1 cut(s)	2436
BsaI	GGTCTC	2 cut(s)	403, 3163
BsaJI	CCNNGG	3 cut(s)	393, 558, 2654
BsaXI	ACNNNNNCTCC	4 cut(s)	1600, 1630, 2759, 2789
Bsc4I	CCNNNNNNNGG	3 cut(s)	1018, 2865, 2866
Bse118I	RCCGGY	2 cut(s)	2306, 2465
Bse1I	ACTGG	4 cut(s)	87, 1680, 2168, 2555
Bse21I	CCTNAGG	1 cut(s)	791
Bse3DI	GCAATG	6 cut(s)	33, 1125, 1445, 1735, 2139, 2788
BseBI	CCWGG	6 cut(s)	316, 560, 1013, 1583, 2081, 3174
BseCI	ATCGAT	1 cut(s)	1694
BseDI	CCNNGG	3 cut(s)	393, 558, 2654
BseLI	CCNNNNNNNGG	3 cut(s)	1018, 2865, 2866
BseMI	GCAATG	6 cut(s)	33, 1125, 1445, 1735, 2139, 2788
BseNI	ACTGG	4 cut(s)	87, 1680, 2168, 2555
BseRI	GAGGAG	1 cut(s)	2762
BseSI	GKGCMC	1 cut(s)	1096
BseXI	GCAGC	6 cut(s)	10, 218, 802, 866, 1024, 2799
BsgI	GTGCAG	2 cut(s)	666, 2085
Bsh1236I	CGCG	2 cut(s)	2446, 2479
BshVI	ATCGAT	1 cut(s)	1694
BsiHKAI	GWGCWC	6 cut(s)	216, 343, 1096, 1445, 1523, 2852
BsiSI	CCGG	2 cut(s)	2307, 2466
BslFI	GGGAC	2 cut(s)	2364, 2567
BslI	CCNNNNNNNGG	3 cut(s)	1018, 2865, 2866
BsmAI	GTCTC	4 cut(s)	403, 1059, 2870, 3163
BsmBI	CGTCTC	1 cut(s)	2870
BsmFI	GGGAC	2 cut(s)	2364, 2567
BsmI	GAATGC	3 cut(s)	138, 1120, 1186
Bso31I	GGTCTC	2 cut(s)	403, 3163
Bsp119I	TTCGAA	2 cut(s)	884, 1647
Bsp1286I	GDGCHC	7 cut(s)	216, 343, 1096, 1445, 1523, 2485, 2852
Bsp1407I	TGTACA	1 cut(s)	1407
BspACI	CCGC	8 cut(s)	804, 1019, 1955, 1986, 2168, 2195, 2479, 2674
BspDI	ATCGAT	1 cut(s)	1694
BspFNI	CGCG	2 cut(s)	2446, 2479
BspHI	TCATGA	2 cut(s)	691, 979
BspLI	GGNNCC	4 cut(s)	257, 1331, 1573, 2380
BspMAI	CTGCAG	1 cut(s)	1042
BspPI	GGATC	7 cut(s)	196, 740, 1516, 1727, 2103, 2239, 3324
BspQI	GCTCTTC	1 cut(s)	3389
BspT104I	TTCGAA	2 cut(s)	884, 1647
BspTNI	GGTCTC	2 cut(s)	403, 3163
BsrDI	GCAATG	6 cut(s)	33, 1125, 1445, 1735, 2139, 2788
BsrFI	RCCGGY	2 cut(s)	2306, 2465
BsrGI	TGTACA	1 cut(s)	1407
BsrI	ACTGG	4 cut(s)	87, 1680, 2168, 2555
BssAI	RCCGGY	2 cut(s)	2306, 2465
BssECI	CCNNGG	3 cut(s)	393, 558, 2654
BssNAI	GTATAC	1 cut(s)	600
BssNI	GRCGYC	1 cut(s)	2436
BssSI	CACGAG	1 cut(s)	400
BssT1I	CCWWGG	1 cut(s)	393
Bst1107I	GTATAC	1 cut(s)	600
Bst2BI	CACGAG	1 cut(s)	400
Bst2UI	CCWGG	6 cut(s)	316, 560, 1013, 1583, 2081, 3174
Bst6I	CTCTTC	2 cut(s)	1044, 3389
BstACI	GRCGYC	1 cut(s)	2436
BstAPI	GCANNNNNTGC	1 cut(s)	3069
BstAUI	TGTACA	1 cut(s)	1407
BstBAI	YACGTR	1 cut(s)	2347
BstBI	TTCGAA	2 cut(s)	884, 1647
BstC8I	GCNNGC	7 cut(s)	363, 1129, 2481, 3182, 3221, 3334, 3401
BstDSI	CCRYGG	1 cut(s)	2654
BstFNI	CGCG	2 cut(s)	2446, 2479
BstHHI	GCGC	3 cut(s)	2448, 2471, 2479
BstMAI	GTCTC	4 cut(s)	403, 1059, 2870, 3163
BstNI	CCWGG	6 cut(s)	316, 560, 1013, 1583, 2081, 3174
BstNSI	RCATGY	6 cut(s)	545, 2107, 2841, 3184, 3223, 3403
BstSCI	CCNGG	6 cut(s)	314, 558, 1011, 1581, 2079, 3172
BstSFI	CTRYAG	4 cut(s)	207, 849, 1038, 2222
BstSLI	GKGCMC	1 cut(s)	1096
BstUI	CGCG	2 cut(s)	2446, 2479
BstV1I	GCAGC	6 cut(s)	10, 218, 802, 866, 1024, 2799
BstV2I	GAAGAC	1 cut(s)	2511
BstX2I	RGATCY	2 cut(s)	2095, 3316
BstXI	CCANNNNNNTGG	4 cut(s)	252, 506, 2006, 2684
BstYI	RGATCY	2 cut(s)	2095, 3316
BstZ17I	GTATAC	1 cut(s)	600
Bsu15I	ATCGAT	1 cut(s)	1694
Bsu36I	CCTNAGG	1 cut(s)	791
BsuI	GTATCC	1 cut(s)	3298
BsuTUI	ATCGAT	1 cut(s)	1694
BtgI	CCRYGG	1 cut(s)	2654
BtgZI	GCGATG	1 cut(s)	256
BtsI	GCAGTG	1 cut(s)	2068
BtsIMutI	CAGTG	6 cut(s)	94, 1687, 2068, 2790, 2850, 3107
Cac8I	GCNNGC	7 cut(s)	363, 1129, 2481, 3182, 3221, 3334, 3401
CciI	TCATGA	2 cut(s)	691, 979
CfoI	GCGC	3 cut(s)	2448, 2471, 2479
Cfr10I	RCCGGY	2 cut(s)	2306, 2465
Cfr13I	GGNCC	6 cut(s)	256, 329, 972, 1744, 2378, 2857
ClaI	ATCGAT	1 cut(s)	1694
CseI	GACGC	1 cut(s)	2444
CsiI	ACCWGGT	1 cut(s)	1011
Csp6I	GTAC	9 cut(s)	729, 900, 1043, 1141, 1408, 1617, 2022, 2052, 2294
CspCI	CAANNNNNGTGG	2 cut(s)	1586, 1621
CviQI	GTAC	9 cut(s)	729, 900, 1043, 1141, 1408, 1617, 2022, 2052, 2294
DraI	TTTAAA	1 cut(s)	892
DrdI	GACNNNNNNGTC	1 cut(s)	2376
DseDI	GACNNNNNNGTC	1 cut(s)	2376
EaeI	YGGCCR	2 cut(s)	1125, 2165
Eam1104I	CTCTTC	2 cut(s)	1044, 3389
EarI	CTCTTC	2 cut(s)	1044, 3389
Ecl136II	GAGCTC	2 cut(s)	214, 1443
Eco130I	CCWWGG	1 cut(s)	393
Eco147I	AGGCCT	2 cut(s)	796, 1348
Eco24I	GRGCYC	3 cut(s)	216, 1445, 2485
Eco31I	GGTCTC	2 cut(s)	403, 3163
Eco47I	GGWCC	3 cut(s)	256, 972, 2378
Eco53kI	GAGCTC	2 cut(s)	214, 1443
Eco57I	CTGAAG	5 cut(s)	248, 2016, 2518, 2988, 3110
Eco81I	CCTNAGG	1 cut(s)	791
EcoICRI	GAGCTC	2 cut(s)	214, 1443
EcoO109I	RGGNCCY	3 cut(s)	256, 1744, 2857
EcoRI	GAATTC	2 cut(s)	2723, 2752
EcoRII	CCWGG	6 cut(s)	314, 558, 1011, 1581, 2079, 3172
EcoT14I	CCWWGG	1 cut(s)	393
EcoT22I	ATGCAT	2 cut(s)	1188, 2839
EcoT38I	GRGCYC	3 cut(s)	216, 1445, 2485
ErhI	CCWWGG	1 cut(s)	393
Esp3I	CGTCTC	1 cut(s)	2870
FalI	AAGNNNNNCTT	2 cut(s)	1465, 1497
FaqI	GGGAC	2 cut(s)	2364, 2567
FauI	CCCGC	1 cut(s)	2472
FauNDI	CATATG	1 cut(s)	1500
FbaI	TGATCA	2 cut(s)	1368, 2172
FblI	GTMKAC	2 cut(s)	599, 2221
Fnu4HI	GCNGC	7 cut(s)	24, 232, 816, 855, 1038, 2168, 2788
FriOI	GRGCYC	3 cut(s)	216, 1445, 2485
Fsp4HI	GCNGC	7 cut(s)	24, 232, 816, 855, 1038, 2168, 2788
FspBI	CTAG	7 cut(s)	834, 963, 1266, 1337, 1562, 2735, 2757
GlaI	GCGC	3 cut(s)	2447, 2470, 2478
GluI	GCNGC	7 cut(s)	24, 232, 816, 855, 1038, 2168, 2788
GsuI	CTGGAG	2 cut(s)	1982, 3195
HapII	CCGG	2 cut(s)	2307, 2466
HgaI	GACGC	1 cut(s)	2444
HhaI	GCGC	3 cut(s)	2448, 2471, 2479
Hin1I	GRCGYC	1 cut(s)	2436
Hin6I	GCGC	3 cut(s)	2446, 2469, 2477
HinP1I	GCGC	3 cut(s)	2446, 2469, 2477
HincII	GTYRAC	2 cut(s)	1209, 2967
HindII	GTYRAC	2 cut(s)	1209, 2967
HindIII	AAGCTT	1 cut(s)	1377
HpaII	CCGG	2 cut(s)	2307, 2466
HphI	GGTGA	8 cut(s)	16, 361, 839, 1471, 2321, 2513, 2654, 2663
Hpy99I	CGWCG	3 cut(s)	2438, 2590, 3387
HpyCH4IV	ACGT	2 cut(s)	2346, 2924
HpySE526I	ACGT	2 cut(s)	2346, 2924
Hsp92I	GRCGYC	1 cut(s)	2436
HspAI	GCGC	3 cut(s)	2446, 2469, 2477
Ksp22I	TGATCA	2 cut(s)	1368, 2172
LguI	GCTCTTC	1 cut(s)	3389
LmnI	GCTCC	8 cut(s)	135, 219, 812, 1906, 2001, 2610, 2847, 3329
Lsp1109I	GCAGC	6 cut(s)	10, 218, 802, 866, 1024, 2799
LweI	GCATC	6 cut(s)	645, 855, 1173, 1773, 2920, 3123
MabI	ACCWGGT	1 cut(s)	1011
MaeI	CTAG	7 cut(s)	834, 963, 1266, 1337, 1562, 2735, 2757
MaeII	ACGT	2 cut(s)	2346, 2924
MaeIII	GTNAC	6 cut(s)	14, 573, 1661, 1981, 2824, 3091
MflI	RGATCY	2 cut(s)	2095, 3316
MhlI	GDGCHC	7 cut(s)	216, 343, 1096, 1445, 1523, 2485, 2852
MlsI	TGGCCA	1 cut(s)	1127
MluNI	TGGCCA	1 cut(s)	1127
MlyI	GAGTC	6 cut(s)	682, 839, 1061, 1831, 1932, 2574
MmeI	TCCRAC	7 cut(s)	468, 738, 1486, 1944, 2256, 2638, 2981
Mox20I	TGGCCA	1 cut(s)	1127
Mph1103I	ATGCAT	2 cut(s)	1188, 2839
MroXI	GAANNNNTTC	2 cut(s)	2693, 3283
MscI	TGGCCA	1 cut(s)	1127
MseI	TTAA	8 cut(s)	356, 425, 741, 891, 1737, 2394, 3036, 3369
MslI	CAYNNNNRTG	5 cut(s)	250, 642, 1304, 1680, 3218
Msp20I	TGGCCA	1 cut(s)	1127
MspA1I	CMGCKG	2 cut(s)	231, 2170
MspI	CCGG	2 cut(s)	2307, 2466
MspR9I	CCNGG	6 cut(s)	316, 560, 1013, 1583, 2081, 3174
Mva1269I	GAATGC	3 cut(s)	138, 1120, 1186
MvaI	CCWGG	6 cut(s)	316, 560, 1013, 1583, 2081, 3174
MvnI	CGCG	2 cut(s)	2446, 2479
NdeI	CATATG	1 cut(s)	1500
NlaIV	GGNNCC	4 cut(s)	257, 1331, 1573, 2380
NmuCI	GTSAC	5 cut(s)	14, 573, 1661, 1981, 2824
NsiI	ATGCAT	2 cut(s)	1188, 2839
NspI	RCATGY	6 cut(s)	545, 2107, 2841, 3184, 3223, 3403
NspV	TTCGAA	2 cut(s)	884, 1647
PaeI	GCATGC	3 cut(s)	3184, 3223, 3403
PagI	TCATGA	2 cut(s)	691, 979
PceI	AGGCCT	2 cut(s)	796, 1348
PciSI	GCTCTTC	1 cut(s)	3389
PcsI	WCGNNNNNNNCGW	1 cut(s)	2505
PctI	GAATGC	3 cut(s)	138, 1120, 1186
PdmI	GAANNNNTTC	2 cut(s)	2693, 3283
PfeI	GAWTC	9 cut(s)	786, 800, 959, 1810, 2139, 2645, 3041, 3252, 3379
PkrI	GCNGC	7 cut(s)	25, 233, 817, 856, 1039, 2169, 2789
PleI	GAGTC	6 cut(s)	682, 838, 1060, 1831, 1932, 2573
PpsI	GAGTC	6 cut(s)	682, 838, 1060, 1831, 1932, 2573
Ppu21I	YACGTR	1 cut(s)	2347
PpuMI	RGGWCCY	1 cut(s)	256
PshBI	ATTAAT	2 cut(s)	356, 741
Psp124BI	GAGCTC	2 cut(s)	216, 1445
Psp5II	RGGWCCY	1 cut(s)	256
Psp6I	CCWGG	6 cut(s)	314, 558, 1011, 1581, 2079, 3172
PspGI	CCWGG	6 cut(s)	314, 558, 1011, 1581, 2079, 3172
PspN4I	GGNNCC	4 cut(s)	257, 1331, 1573, 2380
PspPI	GGNCC	6 cut(s)	256, 329, 972, 1744, 2378, 2857
PspPPI	RGGWCCY	1 cut(s)	256
PstI	CTGCAG	1 cut(s)	1042
PsuI	RGATCY	2 cut(s)	2095, 3316
PvuII	CAGCTG	1 cut(s)	231
RsaI	GTAC	9 cut(s)	730, 901, 1044, 1142, 1409, 1618, 2023, 2053, 2295
RsaNI	GTAC	9 cut(s)	729, 900, 1043, 1141, 1408, 1617, 2022, 2052, 2294
RseI	CAYNNNNRTG	5 cut(s)	250, 642, 1304, 1680, 3218
SacI	GAGCTC	2 cut(s)	216, 1445
SapI	GCTCTTC	1 cut(s)	3389
SaqAI	TTAA	8 cut(s)	356, 425, 741, 891, 1737, 2394, 3036, 3369
SatI	GCNGC	7 cut(s)	24, 232, 816, 855, 1038, 2168, 2788
Sau96I	GGNCC	6 cut(s)	256, 329, 972, 1744, 2378, 2857
ScaI	AGTACT	3 cut(s)	1044, 2023, 2295
SchI	GAGTC	6 cut(s)	682, 839, 1061, 1831, 1932, 2574
ScrFI	CCNGG	6 cut(s)	316, 560, 1013, 1583, 2081, 3174
SduI	GDGCHC	7 cut(s)	216, 343, 1096, 1445, 1523, 2485, 2852
SexAI	ACCWGGT	1 cut(s)	1011
SfaNI	GCATC	6 cut(s)	645, 855, 1173, 1773, 2920, 3123
SfcI	CTRYAG	4 cut(s)	207, 849, 1038, 2222
SfuI	TTCGAA	2 cut(s)	884, 1647
SinI	GGWCC	3 cut(s)	256, 972, 2378
SmiMI	CAYNNNNRTG	5 cut(s)	250, 642, 1304, 1680, 3218
SmlI	CTYRAG	3 cut(s)	472, 2861, 3347
SmoI	CTYRAG	3 cut(s)	472, 2861, 3347
SpeI	ACTAGT	1 cut(s)	2734
SphI	GCATGC	3 cut(s)	3184, 3223, 3403
SseBI	AGGCCT	2 cut(s)	796, 1348
SsiI	CCGC	8 cut(s)	804, 1019, 1955, 1986, 2168, 2195, 2479, 2674
SspMI	CTAG	7 cut(s)	834, 963, 1266, 1337, 1562, 2735, 2757
SstI	GAGCTC	2 cut(s)	216, 1445
StuI	AGGCCT	2 cut(s)	796, 1348
StyD4I	CCNGG	6 cut(s)	314, 558, 1011, 1581, 2079, 3172
StyI	CCWWGG	1 cut(s)	393
TaiI	ACGT	2 cut(s)	2349, 2927
TaqI	TCGA	9 cut(s)	200, 713, 884, 1647, 1694, 2354, 2568, 2907, 3385
TaqII	GACCGA	1 cut(s)	2366
TatI	WGTACW	5 cut(s)	1042, 1407, 2021, 2051, 2293
TauI	GCSGC	1 cut(s)	2170
TfiI	GAWTC	9 cut(s)	786, 800, 959, 1810, 2139, 2645, 3041, 3252, 3379
Tru1I	TTAA	8 cut(s)	356, 425, 741, 891, 1737, 2394, 3036, 3369
Tru9I	TTAA	8 cut(s)	356, 425, 741, 891, 1737, 2394, 3036, 3369
TscAI	CASTG	6 cut(s)	94, 1687, 2068, 2797, 2857, 3114
TseFI	GTSAC	5 cut(s)	14, 573, 1661, 1981, 2824
TseI	GCWGC	6 cut(s)	23, 231, 815, 854, 1037, 2787
Tsp45I	GTSAC	5 cut(s)	14, 573, 1661, 1981, 2824
TspGWI	ACGGA	3 cut(s)	536, 2253, 3435
TspRI	CASTG	6 cut(s)	94, 1687, 2068, 2797, 2857, 3114
VneI	GTGCAC	1 cut(s)	1092
VpaK11BI	GGWCC	3 cut(s)	256, 972, 2378
VspI	ATTAAT	2 cut(s)	356, 741
XapI	RAATTY	8 cut(s)	380, 886, 1649, 1915, 2147, 2723, 2752, 2989
XbaI	TCTAGA	2 cut(s)	962, 1561
XceI	RCATGY	6 cut(s)	545, 2107, 2841, 3184, 3223, 3403
XmiI	GTMKAC	2 cut(s)	599, 2221
XmnI	GAANNNNTTC	2 cut(s)	2693, 3283
XspI	CTAG	7 cut(s)	834, 963, 1266, 1337, 1562, 2735, 2757
ZrmI	AGTACT	3 cut(s)	1044, 2023, 2295
Zsp2I	ATGCAT	2 cut(s)	1188, 2839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.