Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0005257

Physical Location & Seq

Genomic Coordinates Forward (+)

21768835 .. 21770970

Gene Structure 2136 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g20240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGATCCTGAGACCTGATTCAGCGCTGGGATCTGCAAGTAGCGGTGAGTCTGCTGAATCAGGTGCTGTAGCAGCAATCCGGATGCCAATGCTTCAGGCTTCAAATTTCAAAGGGGGTACACCGCAGTTGGTTGATACTCATTATGCTATATTGGTTTTGGTTCTTCCGATTGCAAATTCTGGAGGTTGGAGCCATCATGAGCTGGAGATAGTGGAAGTTGTGGCTGACCAGGTCGCCGTGGCTCTATCCCATGCTGCAGTACTTGAAGAGTCTCAACTAATGAGGGAGAAACTGGGTGAACAAAATCGAGCGTTGCAACAAGCTAAGAATGCAATGATGGCTAGCCAAGCAAGGCACTCGGTTCAGAAGGTAATGAGTCATGGAATGAGAGGGCCAATGCATACGATTTTGGGTTTGCTTTTGATGTTTCAAGAGAATTTAAGTTTCGAACAGAGCATTATTGTGGACACAATGGCAAAAACTAGTTATGTTCTTTGCACTTTGATAAATGATGTGATGGAGATGTCAGCAAAAGATAACAGAAGGTTCCTATTGGAGATGACACCGTTTGAACTACATTCTATGATCAAGGATGCTGCTTGCCTTGCCAAATGCTTGTGTATGTATAAAGGCTTTAGCTTTGAAATTGATGTTCAAAGCTCATTGCCTAATCAGGTGATAGGGGACGAAAAAAGGACTTTCCAAGTGCTCTTGCATATGATTGGGTACCTATTGAGCACCTATAATGGTGGGGGGACTGTTATCTTTCGGGCTATTTCTGAAAGTGGTAGTGATGGCCCTGATGATAGATTGCAAGGAATGTGGAGAACAGGTATTCCAGATGAGTACATTTGTGTTAAGTTTGAATTTGAGATTAGTGAGGCAAGTTCTTATCCTGGCGGATTAGTAGCATTGACACACGATGATGGTAGGCAGCATGACAATGATGAAATCAAAAGGGGCTTGAGCTTCAGCATCTGTAAGAAGATTGTTCAGATGATGCAAGGCAATATCTGGATATCCATGAATCCGGTGGATTTTGCAGAAAGCATGACACTCGTTCTCAGGTTTCAAATCGTCTCGTCTACAGGGAGAGCTATATATCCCCTCGGAAATACATTGGAGCAACCAAATTTGAACTCCCAGTTCAGTGGCCTTCGGGTTATAGTAGCGGATGACGATAACGTAAACAGGACTGTGACCAGTAAGCTGCTCGAGAAACTTGGCTGTCAAGTTACTGCTGTGTCTTCTGGGTTTGAATGCCTGAGTGCCCTTACTGCTGCCGAAAACTCTTTTCAAATTGTTGTTTTGGATCTCCACATGCCGGAAATGGATGGGTTCGAAGTGGCAATGAGAATCAGGAAGTTCTGCAGCCGTAGTTGGCCATCGATCATAGCCCTCACGGCAACTGCGGAGGAGCATATATGGGAGAGATGTCTGCAGCTTGGAATGAACGGATTGATTCGAAAACCTGTTCTTTTGCAAGGAATGGCGGATGAACTTTGTCGAGTTCTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009968 GO:0009987 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0012505 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0023057 GO:0036211 GO:0042562 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051740 GO:0065007 GO:0070297 GO:0070298 GO:0071704 GO:0072328 GO:0140096 GO:1901564 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

GAF HATPase_c HisKA Response_reg

Protein Analysis

507

Amino Acids

55.87

Weight (kDa)

5.37

Isoelectric Point (pI)

40.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	388 - 494	2.1e-21	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04580 AT3G04580
fragaria_vesca	FvH4_3g14281 FvH4_5g22480 FvH4_6g02340
malus_domestica	MD00G1114300.v1.1 MD12G1245100.v1.1
prunus_persica	Prupe.6G348000_v2.0.a1
pyrus_communis	pycom04g20230 pycom04g20240 pycom12g22480
rosa_chinensis	RchiOBHm_Chr3g0450101 RchiOBHm_Chr6g0274471
rosa_laevigata	RLG00000008654 RLG00000025756
rosa_multiflora	Rmu_sc0018882.1_g000003 Rmu_sc0035048.1_g000001 Rmu_sc0035049.1_g000001
rosa_roxburghii	Rroxscaffold_2G00117790 Rroxscaffold_3G00276360 Rroxscaffold_7G00200060
rosa_rugosa	Rorug02G0625400 Rorug02G0625500 Rorug04G0237900
rosa_samantha	Rh3AG024700 Rh3BG025300 Rh3CG024200 Rh3DG025300
rosa_wichuraiana	Rw3G001970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	726
AccB1I	GGYRCC	1 cut(s)	726
AccI	GTMKAC	1 cut(s)	1085
AccIII	TCCGGA	1 cut(s)	78
AciI	CCGC	6 cut(s)	42, 122, 900, 1172, 1412, 1493
AclWI	GGATC	2 cut(s)	37, 1320
AcoI	YGGCCR	1 cut(s)	1382
AcsI	RAATTY	5 cut(s)	103, 175, 436, 866, 1132
AcuI	CTGAAG	2 cut(s)	77, 955
AfaI	GTAC	4 cut(s)	118, 261, 728, 848
AfeI	AGCGCT	1 cut(s)	24
AfiI	CCNNNNNNNGG	1 cut(s)	1324
AhlI	ACTAGT	1 cut(s)	482
AjnI	CCWGG	2 cut(s)	228, 895
AloI	GAACNNNNNNTCC	2 cut(s)	820, 852
AluBI	AGCT	8 cut(s)	202, 323, 639, 660, 969, 1097, 1210, 1444
AluI	AGCT	8 cut(s)	202, 323, 639, 660, 969, 1097, 1210, 1444
Alw21I	GWGCWC	2 cut(s)	711, 740
Alw26I	GTCTC	3 cut(s)	4, 276, 1084
AlwI	GGATC	2 cut(s)	37, 1320
AlwNI	CAGNNNCTG	2 cut(s)	65, 978
Ama87I	CYCGRG	1 cut(s)	1214
Aor13HI	TCCGGA	1 cut(s)	78
Aor51HI	AGCGCT	1 cut(s)	24
AoxI	GGCC	4 cut(s)	392, 796, 1153, 1382
ApeKI	GCWGC	8 cut(s)	71, 254, 596, 934, 1210, 1280, 1371, 1441
ApoI	RAATTY	5 cut(s)	103, 175, 436, 866, 1132
Asp718I	GGTACC	1 cut(s)	726
AspLEI	GCGC	1 cut(s)	25
AspS9I	GGNCC	2 cut(s)	392, 797
AsuHPI	GGTGA	3 cut(s)	56, 308, 688
AsuII	TTCGAA	3 cut(s)	447, 1341, 1465
AsuNHI	GCTAGC	1 cut(s)	341
AvaI	CYCGRG	1 cut(s)	1214
BaeGI	GKGCMC	1 cut(s)	1273
BalI	TGGCCA	1 cut(s)	1384
BanI	GGYRCC	1 cut(s)	726
BbsI	GAAGAC	1 cut(s)	1239
Bbv12I	GWGCWC	2 cut(s)	711, 740
BbvI	GCAGC	8 cut(s)	83, 241, 583, 946, 1197, 1267, 1383, 1453
BccI	CCATC	7 cut(s)	201, 331, 511, 788, 920, 1328, 1393
BceAI	ACGGC	3 cut(s)	221, 1359, 1419
BcgI	CGANNNNNNTGC	4 cut(s)	339, 373, 1039, 1073
BciT130I	CCWGG	2 cut(s)	230, 897
BclI	TGATCA	1 cut(s)	585
BcoDI	GTCTC	3 cut(s)	4, 276, 1084
BcuI	ACTAGT	1 cut(s)	482
BfaI	CTAG	2 cut(s)	342, 483
BfmI	CTRYAG	5 cut(s)	66, 255, 1086, 1369, 1439
BfoI	RGCGCY	1 cut(s)	26
BglI	GCCNNNNNGGC	1 cut(s)	1403
BisI	GCNGC	8 cut(s)	72, 255, 597, 935, 1211, 1281, 1372, 1442
BlsI	GCNGC	8 cut(s)	73, 256, 598, 936, 1212, 1282, 1373, 1443
BmcAI	AGTACT	1 cut(s)	261
Bme1390I	CCNGG	2 cut(s)	230, 897
BmeT110I	CYCGRG	1 cut(s)	1214
BmgT120I	GGNCC	2 cut(s)	392, 797
BmiI	GGNNCC	3 cut(s)	191, 548, 728
BmrFI	CCNGG	2 cut(s)	230, 897
BmrI	ACTGGG	2 cut(s)	302, 1138
BmsI	GCATC	4 cut(s)	72, 583, 984, 990
BmtI	GCTAGC	1 cut(s)	345
BmuI	ACTGGG	2 cut(s)	302, 1138
BpiI	GAAGAC	1 cut(s)	1239
BpmI	CTGGAG	2 cut(s)	201, 224
Bpu14I	TTCGAA	3 cut(s)	447, 1341, 1465
BpuEI	CTTGAG	1 cut(s)	985
Bsa29I	ATCGAT	1 cut(s)	1388
BsaI	GGTCTC	1 cut(s)	4
BsaJI	CCNNGG	2 cut(s)	237, 1108
BsaWI	WCCGGW	2 cut(s)	78, 1030
BsaXI	ACNNNNNCTCC	2 cut(s)	817, 847
Bsc4I	CCNNNNNNNGG	1 cut(s)	1324
Bse1I	ACTGG	3 cut(s)	297, 1144, 1203
Bse3DI	GCAATG	3 cut(s)	339, 662, 1356
BseAI	TCCGGA	1 cut(s)	78
BseBI	CCWGG	2 cut(s)	230, 897
BseCI	ATCGAT	1 cut(s)	1388
BseDI	CCNNGG	2 cut(s)	237, 1108
BseGI	GGATG	5 cut(s)	87, 598, 1180, 1339, 1501
BseLI	CCNNNNNNNGG	1 cut(s)	1324
BseMI	GCAATG	3 cut(s)	339, 662, 1356
BseMII	CTCAG	2 cut(s)	1078, 1256
BseNI	ACTGG	3 cut(s)	297, 1144, 1203
BseRI	GAGGAG	1 cut(s)	1430
BseSI	GKGCMC	1 cut(s)	1273
BseXI	GCAGC	8 cut(s)	83, 241, 583, 946, 1197, 1267, 1383, 1453
BseYI	CCCAGC	1 cut(s)	25
BshFI	GGCC	4 cut(s)	394, 798, 1155, 1384
BshNI	GGYRCC	1 cut(s)	726
BshVI	ATCGAT	1 cut(s)	1388
BsiHKAI	GWGCWC	2 cut(s)	711, 740
BsiHKCI	CYCGRG	1 cut(s)	1214
BsiSI	CCGG	3 cut(s)	79, 1031, 1325
BslFI	GGGAC	2 cut(s)	698, 769
BslI	CCNNNNNNNGG	1 cut(s)	1324
BsmAI	GTCTC	3 cut(s)	4, 276, 1084
BsmBI	CGTCTC	1 cut(s)	1084
BsmFI	GGGAC	2 cut(s)	698, 769
BsmI	GAATGC	2 cut(s)	334, 1265
BsnI	GGCC	4 cut(s)	394, 798, 1155, 1384
Bso31I	GGTCTC	1 cut(s)	4
BsoBI	CYCGRG	1 cut(s)	1214
Bsp119I	TTCGAA	3 cut(s)	447, 1341, 1465
Bsp1286I	GDGCHC	3 cut(s)	711, 740, 1273
Bsp13I	TCCGGA	1 cut(s)	78
Bsp143I	GATC	5 cut(s)	3, 29, 585, 1312, 1389
BspACI	CCGC	6 cut(s)	42, 122, 900, 1172, 1412, 1493
BspANI	GGCC	4 cut(s)	394, 798, 1155, 1384
BspCNI	CTCAG	2 cut(s)	1077, 1257
BspDI	ATCGAT	1 cut(s)	1388
BspEI	TCCGGA	1 cut(s)	78
BspHI	TCATGA	1 cut(s)	196
BspLI	GGNNCC	3 cut(s)	191, 548, 728
BspMAI	CTGCAG	3 cut(s)	259, 1373, 1443
BspOI	GCTAGC	1 cut(s)	345
BspPI	GGATC	2 cut(s)	37, 1320
BspT104I	TTCGAA	3 cut(s)	447, 1341, 1465
BspT107I	GGYRCC	1 cut(s)	726
BspTNI	GGTCTC	1 cut(s)	4
BsrDI	GCAATG	3 cut(s)	339, 662, 1356
BsrI	ACTGG	3 cut(s)	297, 1144, 1203
BssECI	CCNNGG	2 cut(s)	237, 1108
BssMI	GATC	5 cut(s)	3, 29, 585, 1312, 1389
Bst2UI	CCWGG	2 cut(s)	230, 897
Bst4CI	ACNGT	3 cut(s)	567, 760, 1198
Bst6I	CTCTTC	1 cut(s)	261
BstBI	TTCGAA	3 cut(s)	447, 1341, 1465
BstC8I	GCNNGC	2 cut(s)	343, 601
BstDEI	CTNAG	4 cut(s)	8, 324, 1064, 1265
BstDSI	CCRYGG	1 cut(s)	237
BstF5I	GGATG	5 cut(s)	87, 598, 1180, 1339, 1501
BstH2I	RGCGCY	1 cut(s)	26
BstHHI	GCGC	1 cut(s)	25
BstKTI	GATC	5 cut(s)	6, 32, 588, 1315, 1392
BstMAI	GTCTC	3 cut(s)	4, 276, 1084
BstMBI	GATC	5 cut(s)	3, 29, 585, 1312, 1389
BstMWI	GCNNNNNNNGC	7 cut(s)	71, 329, 338, 347, 605, 1277, 1403
BstNI	CCWGG	2 cut(s)	230, 897
BstNSI	RCATGY	1 cut(s)	1324
BstSCI	CCNGG	2 cut(s)	228, 895
BstSFI	CTRYAG	5 cut(s)	66, 255, 1086, 1369, 1439
BstSLI	GKGCMC	1 cut(s)	1273
BstV1I	GCAGC	8 cut(s)	83, 241, 583, 946, 1197, 1267, 1383, 1453
BstV2I	GAAGAC	1 cut(s)	1239
BstX2I	RGATCY	2 cut(s)	29, 1312
BstXI	CCANNNNNNTGG	1 cut(s)	1151
BstYI	RGATCY	2 cut(s)	29, 1312
Bsu15I	ATCGAT	1 cut(s)	1388
BsuRI	GGCC	4 cut(s)	394, 798, 1155, 1384
BsuTUI	ATCGAT	1 cut(s)	1388
BtgI	CCRYGG	1 cut(s)	237
BtsCI	GGATG	5 cut(s)	87, 598, 1180, 1339, 1501
BtsIMutI	CAGTG	1 cut(s)	1156
Cac8I	GCNNGC	2 cut(s)	343, 601
CaiI	CAGNNNCTG	2 cut(s)	65, 978
CciI	TCATGA	1 cut(s)	196
CfoI	GCGC	1 cut(s)	25
Cfr13I	GGNCC	2 cut(s)	392, 797
ClaI	ATCGAT	1 cut(s)	1388
CsiI	ACCWGGT	1 cut(s)	228
Csp6I	GTAC	4 cut(s)	117, 260, 727, 847
CspCI	CAANNNNNGTGG	2 cut(s)	803, 838
CviAII	CATG	7 cut(s)	197, 251, 380, 938, 1024, 1051, 1321
CviQI	GTAC	4 cut(s)	117, 260, 727, 847
DdeI	CTNAG	4 cut(s)	8, 324, 1064, 1265
DpnI	GATC	5 cut(s)	5, 31, 587, 1314, 1391
DpnII	GATC	5 cut(s)	3, 29, 585, 1312, 1389
EaeI	YGGCCR	1 cut(s)	1382
Eam1104I	CTCTTC	1 cut(s)	261
EarI	CTCTTC	1 cut(s)	261
EciI	GGCGGA	2 cut(s)	915, 1508
Eco31I	GGTCTC	1 cut(s)	4
Eco32I	GATATC	1 cut(s)	1020
Eco47III	AGCGCT	1 cut(s)	24
Eco57I	CTGAAG	2 cut(s)	77, 955
Eco88I	CYCGRG	1 cut(s)	1214
EcoRII	CCWGG	2 cut(s)	228, 895
EcoRV	GATATC	1 cut(s)	1020
EcoT22I	ATGCAT	1 cut(s)	402
Esp3I	CGTCTC	1 cut(s)	1084
FaeI	CATG	7 cut(s)	200, 254, 383, 941, 1027, 1054, 1324
FaqI	GGGAC	2 cut(s)	698, 769
FatI	CATG	7 cut(s)	196, 250, 379, 937, 1023, 1050, 1320
FauNDI	CATATG	1 cut(s)	717
FbaI	TGATCA	1 cut(s)	585
FblI	GTMKAC	1 cut(s)	1085
Fnu4HI	GCNGC	8 cut(s)	72, 255, 597, 935, 1211, 1281, 1372, 1442
FokI	GGATG	5 cut(s)	94, 605, 1187, 1346, 1508
Fsp4HI	GCNGC	8 cut(s)	72, 255, 597, 935, 1211, 1281, 1372, 1442
FspBI	CTAG	2 cut(s)	342, 483
GlaI	GCGC	1 cut(s)	24
GluI	GCNGC	8 cut(s)	72, 255, 597, 935, 1211, 1281, 1372, 1442
GsaI	CCCAGC	1 cut(s)	29
GsuI	CTGGAG	2 cut(s)	201, 224
HaeII	RGCGCY	1 cut(s)	26
HaeIII	GGCC	4 cut(s)	394, 798, 1155, 1384
HapII	CCGG	3 cut(s)	79, 1031, 1325
HhaI	GCGC	1 cut(s)	25
Hin1II	CATG	7 cut(s)	200, 254, 383, 941, 1027, 1054, 1324
Hin6I	GCGC	1 cut(s)	23
HinP1I	GCGC	1 cut(s)	23
HinfI	GANTC	8 cut(s)	17, 47, 56, 269, 376, 1027, 1356, 1462
HpaII	CCGG	3 cut(s)	79, 1031, 1325
HphI	GGTGA	3 cut(s)	56, 308, 688
Hpy166II	GTNNAC	5 cut(s)	119, 299, 466, 1086, 1189
Hpy188I	TCNGA	5 cut(s)	168, 366, 781, 996, 1112
Hpy188III	TCNNGA	9 cut(s)	7, 79, 180, 197, 431, 839, 1015, 1216, 1360
Hpy8I	GTNNAC	5 cut(s)	119, 299, 466, 1086, 1189
HpyAV	CCTTC	3 cut(s)	361, 537, 1166
HpyCH4III	ACNGT	3 cut(s)	567, 760, 1198
HpyCH4IV	ACGT	1 cut(s)	1185
HpyF10VI	GCNNNNNNNGC	7 cut(s)	71, 329, 338, 347, 605, 1277, 1403
HpyF3I	CTNAG	4 cut(s)	8, 324, 1064, 1265
HpySE526I	ACGT	1 cut(s)	1185
Hsp92II	CATG	7 cut(s)	200, 254, 383, 941, 1027, 1054, 1324
HspAI	GCGC	1 cut(s)	23
Kpn2I	TCCGGA	1 cut(s)	78
KpnI	GGTACC	1 cut(s)	730
Ksp22I	TGATCA	1 cut(s)	585
Kzo9I	GATC	5 cut(s)	3, 29, 585, 1312, 1389
LmnI	GCTCC	3 cut(s)	189, 1123, 1417
Lsp1109I	GCAGC	8 cut(s)	83, 241, 583, 946, 1197, 1267, 1383, 1453
LweI	GCATC	4 cut(s)	72, 583, 984, 990
MabI	ACCWGGT	1 cut(s)	228
MaeI	CTAG	2 cut(s)	342, 483
MaeII	ACGT	1 cut(s)	1185
MaeIII	GTNAC	2 cut(s)	1198, 1234
MalI	GATC	5 cut(s)	5, 31, 587, 1314, 1391
MboI	GATC	5 cut(s)	3, 29, 585, 1312, 1389
MboII	GAAGA	4 cut(s)	155, 278, 997, 1239
MflI	RGATCY	2 cut(s)	29, 1312
MhlI	GDGCHC	3 cut(s)	711, 740, 1273
MlsI	TGGCCA	1 cut(s)	1384
MluCI	AATT	7 cut(s)	103, 175, 436, 645, 866, 1132, 1299
MluNI	TGGCCA	1 cut(s)	1384
MlyI	GAGTC	3 cut(s)	56, 278, 385
MmeI	TCCRAC	1 cut(s)	167
MnlI	CCTC	7 cut(s)	176, 276, 383, 874, 1118, 1408, 1409
Mox20I	TGGCCA	1 cut(s)	1384
Mph1103I	ATGCAT	1 cut(s)	402
MroI	TCCGGA	1 cut(s)	78
MscI	TGGCCA	1 cut(s)	1384
MseI	TTAA	2 cut(s)	440, 858
MslI	CAYNNNNRTG	3 cut(s)	461, 924, 942
Msp20I	TGGCCA	1 cut(s)	1384
MspI	CCGG	3 cut(s)	79, 1031, 1325
MspR9I	CCNGG	2 cut(s)	230, 897
Mva1269I	GAATGC	2 cut(s)	334, 1265
MvaI	CCWGG	2 cut(s)	230, 897
MwoI	GCNNNNNNNGC	7 cut(s)	71, 329, 338, 347, 605, 1277, 1403
NdeI	CATATG	1 cut(s)	717
NdeII	GATC	5 cut(s)	3, 29, 585, 1312, 1389
NheI	GCTAGC	1 cut(s)	341
NlaIII	CATG	7 cut(s)	200, 254, 383, 941, 1027, 1054, 1324
NlaIV	GGNNCC	3 cut(s)	191, 548, 728
NmuCI	GTSAC	1 cut(s)	1198
NsiI	ATGCAT	1 cut(s)	402
NspI	RCATGY	1 cut(s)	1324
NspV	TTCGAA	3 cut(s)	447, 1341, 1465
PaeR7I	CTCGAG	1 cut(s)	1214
PagI	TCATGA	1 cut(s)	196
PctI	GAATGC	2 cut(s)	334, 1265
PfeI	GAWTC	5 cut(s)	17, 56, 1027, 1356, 1462
PflFI	GACNNNGTC	1 cut(s)	230
PkrI	GCNGC	8 cut(s)	73, 256, 598, 936, 1212, 1282, 1373, 1443
PleI	GAGTC	3 cut(s)	55, 277, 384
PpsI	GAGTC	3 cut(s)	55, 277, 384
Psp6I	CCWGG	2 cut(s)	228, 895
PspFI	CCCAGC	1 cut(s)	25
PspGI	CCWGG	2 cut(s)	228, 895
PspN4I	GGNNCC	3 cut(s)	191, 548, 728
PspPI	GGNCC	2 cut(s)	392, 797
PstI	CTGCAG	3 cut(s)	259, 1373, 1443
PstNI	CAGNNNCTG	2 cut(s)	65, 978
PsuI	RGATCY	2 cut(s)	29, 1312
PsyI	GACNNNGTC	1 cut(s)	230
RsaI	GTAC	4 cut(s)	118, 261, 728, 848
RsaNI	GTAC	4 cut(s)	117, 260, 727, 847
RseI	CAYNNNNRTG	3 cut(s)	461, 924, 942
SaqAI	TTAA	2 cut(s)	440, 858
SatI	GCNGC	8 cut(s)	72, 255, 597, 935, 1211, 1281, 1372, 1442
Sau3AI	GATC	5 cut(s)	3, 29, 585, 1312, 1389
Sau96I	GGNCC	2 cut(s)	392, 797
ScaI	AGTACT	1 cut(s)	261
SchI	GAGTC	3 cut(s)	56, 278, 385
ScrFI	CCNGG	2 cut(s)	230, 897
SduI	GDGCHC	3 cut(s)	711, 740, 1273
SexAI	ACCWGGT	1 cut(s)	228
SfaNI	GCATC	4 cut(s)	72, 583, 984, 990
SfcI	CTRYAG	5 cut(s)	66, 255, 1086, 1369, 1439
Sfr274I	CTCGAG	1 cut(s)	1214
SfuI	TTCGAA	3 cut(s)	447, 1341, 1465
SlaI	CTCGAG	1 cut(s)	1214
SmiMI	CAYNNNNRTG	3 cut(s)	461, 924, 942
SmlI	CTYRAG	2 cut(s)	964, 1214
SmoI	CTYRAG	2 cut(s)	964, 1214
SpeI	ACTAGT	1 cut(s)	482
Sse9I	AATT	7 cut(s)	103, 175, 436, 645, 866, 1132, 1299
SsiI	CCGC	6 cut(s)	42, 122, 900, 1172, 1412, 1493
SspMI	CTAG	2 cut(s)	342, 483
StyD4I	CCNGG	2 cut(s)	228, 895
TaaI	ACNGT	3 cut(s)	567, 760, 1198
TaiI	ACGT	1 cut(s)	1188
TaqI	TCGA	7 cut(s)	307, 447, 1215, 1341, 1388, 1465, 1507
TasI	AATT	7 cut(s)	103, 175, 436, 645, 866, 1132, 1299
TatI	WGTACW	2 cut(s)	259, 846
TfiI	GAWTC	5 cut(s)	17, 56, 1027, 1356, 1462
Tru1I	TTAA	2 cut(s)	440, 858
Tru9I	TTAA	2 cut(s)	440, 858
TscAI	CASTG	1 cut(s)	1156
TseFI	GTSAC	1 cut(s)	1198
TseI	GCWGC	8 cut(s)	71, 254, 596, 934, 1210, 1280, 1371, 1441
Tsp45I	GTSAC	1 cut(s)	1198
TspDTI	ATGAA	4 cut(s)	963, 1040, 1466, 1512
TspGWI	ACGGA	1 cut(s)	1470
TspRI	CASTG	1 cut(s)	1156
Tth111I	GACNNNGTC	1 cut(s)	230
XapI	RAATTY	5 cut(s)	103, 175, 436, 866, 1132
XceI	RCATGY	1 cut(s)	1324
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1030
XhoI	CTCGAG	1 cut(s)	1214
XmiI	GTMKAC	1 cut(s)	1085
XspI	CTAG	2 cut(s)	342, 483
ZrmI	AGTACT	1 cut(s)	261
Zsp2I	ATGCAT	1 cut(s)	402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.