Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0005257

Physical Location & Seq

Genomic Coordinates Forward (+)

29744560 .. 29748280

Gene Structure 3721 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G348000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGTTAAGAGAATTAGCTCTTGGATTGTTAGTTTTCTATTTCATTAGATTTGTTTCAGCCATTGATAATGACTTTGCACATTGTAATTGCGACGAGGAGGGTTTTTGGAGCATTCCAAACATTTTAGAGTACCAAAGAGTGAGTGATTTCTTGATTGCAATAGCATATTTTTCAATCCCTATAGAACTTCTTTACTTTGTCAGCTGCTCAAACGTTCCATTCAAATGGGTCCTCCTTCAGTTTATTGCGTTTATAGTCCTTTGTGGATTGACCCATTTGCTAAATGCATGGACGTACAACGGCCGCCAGTCATTCCAGTTGATGCTGTCCCTCACCATTGCCAAATTCCTCACAGCCTTGGTCTCATGTGCAACTGCAATAACCCTTTTAACTCTGTTTCCTCTTATTCTCAAAGTGAAAGTGAGAGAACTGTTCTTGAGGCAAAATGTGTTGGAATTAGACCAAGAGGTTGGGATGATGAAGATACAGAAGGAAGCGAGTTGGCATGTCCGAATGCTGACCCGTGAAATTAGAAAGTCACTGGATAAGCATACCATATTGTATACAACTCTGGTTGAGCTTTCAAAGACATTAGACTTGCATAATTGTGCTGTTTGGATGCCGAATGAGGATAGAGCAGAGATGAACCTGACCCATGAGTTGAAATCAAGTTCTTCGCGAAATTATCTCCGTTCTATCCCAATTAATGACCCAGATGTGTTGGAGATAAGAGAGAGCGAGAGGGTAACAATCCTAAGTCCTGAATCAGCACTTGGATCTGCAAGTAGTGGTGAGTCTGGTGAATCAGGTGCTGTGGCAGCAATCCGAATGCCAATGCTTCGGGTTTCAAATTTCAAAGGGGGTACACCGCAGTTGGTTGACACTCATTATGCGATATTGGTTTTGGTTCTTCCAGTAATGGATTCTAGAGGCTGGAGCCATCATGAGATGGAGATAGTTGAAGTTGTGGCTGACCAGGTTGCTGTGGCTCTATCCCATGCTGCAGTACTTGAAGAGTCTCAACTAATGAGAGAGAAACTGGGTGAACAAAATCGTGCGTTGCAACAGGCGAAGAAGAATGCAATGATGGCGAGCCAAGCAAGGCACTCATTTCAGAAGGTAATGAGTCATGGAATGCGAAGGCCAATGCATACGATTTTGGGCTTGCTTTCTATGTTTCAAGAGAATTTAAGTTTCAAACAGAGCTTAATTGTGGACACAATGGCGAAAACTAGTTATGTTCTCTGCACTTTGATCAATGATGTGATGGAGATGTCAGCAAAAGATAATGGAAGGTTCCCGTTGGAGATGAGGCCATTTCAACTACATTCTATGATCAAGGAAGCTTCTTGTCTTGCCGAGTGCCTGTGTATGTATAAAGGCTTTGGTTTTGAAGTTGATGTTCAAAGCTCATTGCCTAATCAGGTGATTGGGGATGAAAGAAGGGCTTTCCAAGTAATATTGCATATGGTTGGGTATCTATTGAGCACCTATAATGGCGTGGGGACTGTCATCTTCCGGGCTATTTCAGAGAGTGGTTATGAGGGTCAGGATGATAGATTGCAAGGAATCTGGAGATCAAATGTACCAGATGAGTACGTATCTATAAAGTTTGAATTTGAGATTAGTGAGGGAAGTTCTCGTCCTGGTGGATTAGTCTCATTGATGCACTATGCTGGTGGGAGGCACAACAATGATGAAATTAAGAAGGGCCTGAGCTTCAGCATTTGTAAAAAGATTGTCCAGATGATGCAAGGCAATATCTGGATATCCATGAACCCAGTGGATTTTGCAGAAAGCATGACACTTGTTCTCAGGTTTCAAATCCTCCCATCTATTGGGAGAAGTATGCATCTCCCTGGAAATAACTTGGAGCAGCCAAATTCCAACTCACAGTTCAGAGGCCTTGGGGTTATAGTAGCCGATGATGATAACGTAAACAGGACTGTGACCAATAAGCTGCTTGAGAAACTCGGCTGTCAAGTAACTGCTGTTTCTTCCGGGTTCGAATGCCTGAGTGCCCTCAGTGATGCTGAAAATTCATTTAAAATTGTTGTTTTGGATCTTCACATGCCTGAAATGGATGGGTTTGAAGTGGCAATGAGAATCAGGAAATTCCACAGCCCTAATTGGCCATTGATCATAGCCCTGACAGCAAGTGCGGAGGAACATGTGTGGGAGAGATGTCTACAGATGGGAATGAATGGATTGATTCGAAAACCTGTTCTATTGCAAGGGATGGCAGATGAACTTCGCAGAGTACTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009968 GO:0009987 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0012505 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0023057 GO:0036211 GO:0042562 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051740 GO:0065007 GO:0070297 GO:0070298 GO:0071704 GO:0072328 GO:0140096 GO:1901564 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

GAF HATPase_c HisKA Response_reg

Protein Analysis

757

Amino Acids

85.29

Weight (kDa)

6.06

Isoelectric Point (pI)

44.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04580 AT3G04580
fragaria_vesca	FvH4_3g14281 FvH4_5g22480 FvH4_6g02340
malus_domestica	MD00G1114300.v1.1 MD12G1245100.v1.1
prunus_persica	Prupe.6G348000_v2.0.a1
pyrus_communis	pycom04g20230 pycom04g20240 pycom12g22480
rosa_chinensis	RchiOBHm_Chr3g0450101 RchiOBHm_Chr6g0274471
rosa_laevigata	RLG00000008654 RLG00000025756
rosa_multiflora	Rmu_sc0018882.1_g000003 Rmu_sc0035048.1_g000001 Rmu_sc0035049.1_g000001
rosa_roxburghii	Rroxscaffold_2G00117790 Rroxscaffold_3G00276360 Rroxscaffold_7G00200060
rosa_rugosa	Rorug02G0625400 Rorug02G0625500 Rorug04G0237900
rosa_samantha	Rh3AG024700 Rh3BG025300 Rh3CG024200 Rh3DG025300
rosa_wichuraiana	Rw3G001970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1838
AccI	GTMKAC	2 cut(s)	563, 2188
AccII	CGCG	1 cut(s)	679
AciI	CCGC	3 cut(s)	304, 869, 2162
AclI	AACGTT	1 cut(s)	213
AclWI	GGATC	2 cut(s)	784, 2070
AcoI	YGGCCR	2 cut(s)	301, 2132
AcsI	RAATTY	7 cut(s)	344, 850, 1186, 1616, 1882, 2038, 2114
AcuI	CTGAAG	2 cut(s)	221, 1705
AfaI	GTAC	7 cut(s)	131, 296, 865, 1008, 1587, 1598, 2262
AfiI	CCNNNNNNNGG	1 cut(s)	1838
AflIII	ACRYGT	1 cut(s)	2170
AhlI	ACTAGT	1 cut(s)	1232
AjnI	CCWGG	3 cut(s)	975, 1645, 1858
AjuI	GAANNNNNNNTTGG	5 cut(s)	35, 756, 788, 1880, 1912
AluBI	AGCT	8 cut(s)	17, 204, 580, 1206, 1346, 1410, 1719, 1960
AluI	AGCT	8 cut(s)	17, 204, 580, 1206, 1346, 1410, 1719, 1960
Alw21I	GWGCWC	1 cut(s)	1490
Alw26I	GTCTC	3 cut(s)	367, 1023, 1663
AlwI	GGATC	2 cut(s)	784, 2070
AlwNI	CAGNNNCTG	1 cut(s)	812
AoxI	GGCC	6 cut(s)	301, 1142, 1313, 1711, 1903, 2132
ApeKI	GCWGC	5 cut(s)	204, 818, 1001, 1876, 1960
ApoI	RAATTY	7 cut(s)	344, 850, 1186, 1616, 1882, 2038, 2114
AseI	ATTAAT	1 cut(s)	705
AspS9I	GGNCC	2 cut(s)	229, 1711
AsuC2I	CCSGG	2 cut(s)	1520, 2002
AsuHPI	GGTGA	5 cut(s)	325, 803, 812, 1055, 1438
AsuII	TTCGAA	2 cut(s)	2007, 2215
AvaII	GGWCC	1 cut(s)	229
BaeGI	GKGCMC	1 cut(s)	2023
BalI	TGGCCA	1 cut(s)	2134
Bbv12I	GWGCWC	1 cut(s)	1490
BbvI	GCAGC	5 cut(s)	191, 830, 988, 1888, 1947
BccI	CCATC	8 cut(s)	943, 948, 1081, 1261, 1840, 2078, 2188, 2233
BceAI	ACGGC	1 cut(s)	316
BciT130I	CCWGG	3 cut(s)	977, 1647, 1860
BclI	TGATCA	3 cut(s)	1254, 1335, 2139
BcnI	CCSGG	2 cut(s)	1520, 2002
BcoDI	GTCTC	3 cut(s)	367, 1023, 1663
BcuI	ACTAGT	1 cut(s)	1232
BfaI	CTAG	2 cut(s)	927, 1233
BfmI	CTRYAG	3 cut(s)	180, 1002, 2189
BisI	GCNGC	6 cut(s)	205, 304, 819, 1002, 1877, 1961
BlsI	GCNGC	6 cut(s)	206, 305, 820, 1003, 1878, 1962
BmcAI	AGTACT	2 cut(s)	1008, 2262
Bme1390I	CCNGG	5 cut(s)	977, 1520, 1647, 1860, 2002
Bme18I	GGWCC	1 cut(s)	229
BmgT120I	GGNCC	2 cut(s)	229, 1711
BmiI	GGNNCC	3 cut(s)	230, 938, 1298
BmrFI	CCNGG	5 cut(s)	977, 1520, 1647, 1860, 2002
BmrI	ACTGGG	2 cut(s)	1049, 1775
BmsI	GCATC	6 cut(s)	312, 609, 1656, 1740, 1861, 2020
BmuI	ACTGGG	2 cut(s)	1049, 1775
BpmI	CTGGAG	2 cut(s)	955, 1594
Bpu10I	CCTNAGC	1 cut(s)	1715
Bpu14I	TTCGAA	2 cut(s)	2007, 2215
BpuEI	CTTGAG	2 cut(s)	457, 1985
BpuMI	CCSGG	2 cut(s)	1520, 2002
BsaAI	YACGTR	1 cut(s)	1600
BsaI	GGTCTC	1 cut(s)	367
BsaJI	CCNNGG	3 cut(s)	357, 1858, 1906
Bsc4I	CCNNNNNNNGG	1 cut(s)	1838
Bse1I	ACTGG	6 cut(s)	307, 316, 546, 914, 1044, 1781
Bse3DI	GCAATG	4 cut(s)	336, 1089, 1412, 2106
BseBI	CCWGG	3 cut(s)	977, 1647, 1860
BseDI	CCNNGG	3 cut(s)	357, 1858, 1906
BseGI	GGATG	6 cut(s)	480, 624, 1441, 1558, 2089, 2244
BseLI	CCNNNNNNNGG	1 cut(s)	1838
BseMI	GCAATG	4 cut(s)	336, 1089, 1412, 2106
BseMII	CTCAG	4 cut(s)	1706, 1828, 2006, 2038
BseNI	ACTGG	6 cut(s)	307, 316, 546, 914, 1044, 1781
BseRI	GAGGAG	1 cut(s)	110
BseSI	GKGCMC	1 cut(s)	2023
BseX3I	CGGCCG	1 cut(s)	301
BseXI	GCAGC	5 cut(s)	191, 830, 988, 1888, 1947
BsgI	GTGCAG	1 cut(s)	1231
Bsh1236I	CGCG	1 cut(s)	679
Bsh1285I	CGRYCG	1 cut(s)	304
BshFI	GGCC	6 cut(s)	303, 1144, 1315, 1713, 1905, 2134
BsiEI	CGRYCG	1 cut(s)	304
BsiHKAI	GWGCWC	1 cut(s)	1490
BsiSI	CCGG	2 cut(s)	1519, 2001
BslFI	GGGAC	2 cut(s)	313, 1519
BslI	CCNNNNNNNGG	1 cut(s)	1838
BsmAI	GTCTC	3 cut(s)	367, 1023, 1663
BsmFI	GGGAC	2 cut(s)	313, 1519
BsmI	GAATGC	6 cut(s)	111, 519, 834, 1084, 1140, 2015
BsnI	GGCC	6 cut(s)	303, 1144, 1315, 1713, 1905, 2134
Bso31I	GGTCTC	1 cut(s)	367
Bsp119I	TTCGAA	2 cut(s)	2007, 2215
Bsp1286I	GDGCHC	2 cut(s)	1490, 2023
Bsp143I	GATC	6 cut(s)	776, 1254, 1335, 1577, 2062, 2139
Bsp68I	TCGCGA	1 cut(s)	679
BspACI	CCGC	3 cut(s)	304, 869, 2162
BspANI	GGCC	6 cut(s)	303, 1144, 1315, 1713, 1905, 2134
BspCNI	CTCAG	4 cut(s)	1707, 1827, 2007, 2037
BspFNI	CGCG	1 cut(s)	679
BspHI	TCATGA	1 cut(s)	943
BspLI	GGNNCC	3 cut(s)	230, 938, 1298
BspMAI	CTGCAG	1 cut(s)	1006
BspPI	GGATC	2 cut(s)	784, 2070
BspT104I	TTCGAA	2 cut(s)	2007, 2215
BspTNI	GGTCTC	1 cut(s)	367
BsrDI	GCAATG	4 cut(s)	336, 1089, 1412, 2106
BsrI	ACTGG	6 cut(s)	307, 316, 546, 914, 1044, 1781
BssECI	CCNNGG	3 cut(s)	357, 1858, 1906
BssMI	GATC	6 cut(s)	776, 1254, 1335, 1577, 2062, 2139
BssNAI	GTATAC	1 cut(s)	564
BssT1I	CCWWGG	2 cut(s)	357, 1906
Bst1107I	GTATAC	1 cut(s)	564
Bst2UI	CCWGG	3 cut(s)	977, 1647, 1860
Bst4CI	ACNGT	4 cut(s)	432, 1510, 1896, 1948
Bst6I	CTCTTC	1 cut(s)	1008
BstBAI	YACGTR	1 cut(s)	1600
BstBI	TTCGAA	2 cut(s)	2007, 2215
BstC8I	GCNNGC	2 cut(s)	1093, 1166
BstDEI	CTNAG	5 cut(s)	755, 1715, 1814, 2015, 2024
BstF5I	GGATG	6 cut(s)	480, 624, 1441, 1558, 2089, 2244
BstFNI	CGCG	1 cut(s)	679
BstKTI	GATC	6 cut(s)	779, 1257, 1338, 1580, 2065, 2142
BstMAI	GTCTC	3 cut(s)	367, 1023, 1663
BstMBI	GATC	6 cut(s)	776, 1254, 1335, 1577, 2062, 2139
BstMCI	CGRYCG	1 cut(s)	304
BstMWI	GCNNNNNNNGC	4 cut(s)	818, 1088, 1097, 2153
BstNI	CCWGG	3 cut(s)	977, 1647, 1860
BstNSI	RCATGY	3 cut(s)	509, 2074, 2174
BstSCI	CCNGG	5 cut(s)	975, 1518, 1645, 1858, 2000
BstSFI	CTRYAG	3 cut(s)	180, 1002, 2189
BstSLI	GKGCMC	1 cut(s)	2023
BstSNI	TACGTA	1 cut(s)	1600
BstUI	CGCG	1 cut(s)	679
BstV1I	GCAGC	5 cut(s)	191, 830, 988, 1888, 1947
BstX2I	RGATCY	2 cut(s)	776, 2062
BstXI	CCANNNNNNTGG	2 cut(s)	225, 470
BstYI	RGATCY	2 cut(s)	776, 2062
BstZ17I	GTATAC	1 cut(s)	564
BstZI	CGGCCG	1 cut(s)	301
BsuRI	GGCC	6 cut(s)	303, 1144, 1315, 1713, 1905, 2134
BtsCI	GGATG	6 cut(s)	480, 624, 1441, 1558, 2089, 2244
BtsIMutI	CAGTG	3 cut(s)	539, 1788, 2032
BtuMI	TCGCGA	1 cut(s)	679
Cac8I	GCNNGC	2 cut(s)	1093, 1166
CaiI	CAGNNNCTG	1 cut(s)	812
CciI	TCATGA	1 cut(s)	943
Cfr13I	GGNCC	2 cut(s)	229, 1711
CsiI	ACCWGGT	1 cut(s)	975
Csp6I	GTAC	7 cut(s)	130, 295, 864, 1007, 1586, 1597, 2261
CviQI	GTAC	7 cut(s)	130, 295, 864, 1007, 1586, 1597, 2261
DdeI	CTNAG	5 cut(s)	755, 1715, 1814, 2015, 2024
DpnI	GATC	6 cut(s)	778, 1256, 1337, 1579, 2064, 2141
DpnII	GATC	6 cut(s)	776, 1254, 1335, 1577, 2062, 2139
DraI	TTTAAA	1 cut(s)	2047
EaeI	YGGCCR	2 cut(s)	301, 2132
EagI	CGGCCG	1 cut(s)	301
Eam1104I	CTCTTC	1 cut(s)	1008
EarI	CTCTTC	1 cut(s)	1008
EclXI	CGGCCG	1 cut(s)	301
Eco105I	TACGTA	1 cut(s)	1600
Eco130I	CCWWGG	2 cut(s)	357, 1906
Eco147I	AGGCCT	1 cut(s)	1905
Eco31I	GGTCTC	1 cut(s)	367
Eco32I	GATATC	1 cut(s)	1770
Eco47I	GGWCC	1 cut(s)	229
Eco52I	CGGCCG	1 cut(s)	301
Eco57I	CTGAAG	2 cut(s)	221, 1705
EcoO109I	RGGNCCY	2 cut(s)	229, 1711
EcoRII	CCWGG	3 cut(s)	975, 1645, 1858
EcoRV	GATATC	1 cut(s)	1770
EcoT14I	CCWWGG	2 cut(s)	357, 1906
EcoT22I	ATGCAT	3 cut(s)	289, 1152, 1854
ErhI	CCWWGG	2 cut(s)	357, 1906
FalI	AAGNNNNNCTT	2 cut(s)	1432, 1464
FaqI	GGGAC	2 cut(s)	313, 1519
FauNDI	CATATG	1 cut(s)	1467
FbaI	TGATCA	3 cut(s)	1254, 1335, 2139
FblI	GTMKAC	2 cut(s)	563, 2188
Fnu4HI	GCNGC	6 cut(s)	205, 304, 819, 1002, 1877, 1961
FokI	GGATG	6 cut(s)	487, 631, 1448, 1565, 2096, 2251
Fsp4HI	GCNGC	6 cut(s)	205, 304, 819, 1002, 1877, 1961
FspBI	CTAG	2 cut(s)	927, 1233
GluI	GCNGC	6 cut(s)	205, 304, 819, 1002, 1877, 1961
GsuI	CTGGAG	2 cut(s)	955, 1594
HaeIII	GGCC	6 cut(s)	303, 1144, 1315, 1713, 1905, 2134
HapII	CCGG	2 cut(s)	1519, 2001
HincII	GTYRAC	1 cut(s)	880
HindII	GTYRAC	1 cut(s)	880
HindIII	AAGCTT	1 cut(s)	1344
HinfI	GANTC	9 cut(s)	764, 794, 803, 923, 1016, 1126, 1569, 2106, 2212
HpaII	CCGG	2 cut(s)	1519, 2001
HphI	GGTGA	5 cut(s)	325, 803, 812, 1055, 1438
Hpy166II	GTNNAC	7 cut(s)	564, 866, 880, 1046, 1216, 1939, 2189
Hpy188I	TCNGA	5 cut(s)	512, 827, 1116, 1531, 1901
Hpy8I	GTNNAC	7 cut(s)	564, 866, 880, 1046, 1216, 1939, 2189
Hpy99I	CGWCG	1 cut(s)	95
HpyAV	CCTTC	7 cut(s)	245, 484, 1111, 1134, 1287, 1437, 1702
HpyCH4III	ACNGT	4 cut(s)	432, 1510, 1896, 1948
HpyCH4IV	ACGT	4 cut(s)	213, 293, 1599, 1935
HpyF10VI	GCNNNNNNNGC	4 cut(s)	818, 1088, 1097, 2153
HpyF3I	CTNAG	5 cut(s)	755, 1715, 1814, 2015, 2024
HpySE526I	ACGT	4 cut(s)	213, 293, 1599, 1935
Ksp22I	TGATCA	3 cut(s)	1254, 1335, 2139
Kzo9I	GATC	6 cut(s)	776, 1254, 1335, 1577, 2062, 2139
LmnI	GCTCC	3 cut(s)	108, 936, 1873
Lsp1109I	GCAGC	5 cut(s)	191, 830, 988, 1888, 1947
LweI	GCATC	6 cut(s)	312, 609, 1656, 1740, 1861, 2020
MabI	ACCWGGT	1 cut(s)	975
MaeI	CTAG	2 cut(s)	927, 1233
MaeII	ACGT	4 cut(s)	213, 293, 1599, 1935
MaeIII	GTNAC	4 cut(s)	537, 745, 1948, 1984
MalI	GATC	6 cut(s)	778, 1256, 1337, 1579, 2064, 2141
MboI	GATC	6 cut(s)	776, 1254, 1335, 1577, 2062, 2139
MboII	GAAGA	9 cut(s)	493, 666, 902, 1025, 1084, 1087, 1507, 1989, 2057
MflI	RGATCY	2 cut(s)	776, 2062
MhlI	GDGCHC	2 cut(s)	1490, 2023
MlsI	TGGCCA	1 cut(s)	2134
MluNI	TGGCCA	1 cut(s)	2134
MlyI	GAGTC	3 cut(s)	803, 1025, 1135
MmeI	TCCRAC	4 cut(s)	432, 702, 1284, 1911
Mox20I	TGGCCA	1 cut(s)	2134
Mph1103I	ATGCAT	3 cut(s)	289, 1152, 1854
MscI	TGGCCA	1 cut(s)	2134
MseI	TTAA	7 cut(s)	5, 389, 705, 1190, 1208, 1704, 2046
MslI	CAYNNNNRTG	3 cut(s)	223, 606, 1692
Msp20I	TGGCCA	1 cut(s)	2134
MspA1I	CMGCKG	1 cut(s)	204
MspI	CCGG	2 cut(s)	1519, 2001
MspR9I	CCNGG	5 cut(s)	977, 1520, 1647, 1860, 2002
Mva1269I	GAATGC	6 cut(s)	111, 519, 834, 1084, 1140, 2015
MvaI	CCWGG	3 cut(s)	977, 1647, 1860
MvnI	CGCG	1 cut(s)	679
MwoI	GCNNNNNNNGC	4 cut(s)	818, 1088, 1097, 2153
NciI	CCSGG	2 cut(s)	1520, 2002
NdeI	CATATG	1 cut(s)	1467
NdeII	GATC	6 cut(s)	776, 1254, 1335, 1577, 2062, 2139
NlaIV	GGNNCC	3 cut(s)	230, 938, 1298
NmeAIII	GCCGAG	2 cut(s)	1384, 1953
NmuCI	GTSAC	2 cut(s)	537, 1948
NruI	TCGCGA	1 cut(s)	679
NsiI	ATGCAT	3 cut(s)	289, 1152, 1854
NspI	RCATGY	3 cut(s)	509, 2074, 2174
NspV	TTCGAA	2 cut(s)	2007, 2215
PagI	TCATGA	1 cut(s)	943
PceI	AGGCCT	1 cut(s)	1905
PciI	ACATGT	1 cut(s)	2170
PctI	GAATGC	6 cut(s)	111, 519, 834, 1084, 1140, 2015
PfeI	GAWTC	6 cut(s)	764, 803, 923, 1569, 2106, 2212
PflMI	CCANNNNNTGG	1 cut(s)	1838
PkrI	GCNGC	6 cut(s)	206, 305, 820, 1003, 1878, 1962
PleI	GAGTC	3 cut(s)	802, 1024, 1134
PpsI	GAGTC	3 cut(s)	802, 1024, 1134
Ppu21I	YACGTR	1 cut(s)	1600
PpuMI	RGGWCCY	1 cut(s)	229
PscI	ACATGT	1 cut(s)	2170
PshBI	ATTAAT	1 cut(s)	705
Psp1406I	AACGTT	1 cut(s)	213
Psp5II	RGGWCCY	1 cut(s)	229
Psp6I	CCWGG	3 cut(s)	975, 1645, 1858
PspGI	CCWGG	3 cut(s)	975, 1645, 1858
PspN4I	GGNNCC	3 cut(s)	230, 938, 1298
PspPI	GGNCC	2 cut(s)	229, 1711
PspPPI	RGGWCCY	1 cut(s)	229
PstI	CTGCAG	1 cut(s)	1006
PstNI	CAGNNNCTG	1 cut(s)	812
PsuI	RGATCY	2 cut(s)	776, 2062
PvuII	CAGCTG	1 cut(s)	204
RruI	TCGCGA	1 cut(s)	679
RsaI	GTAC	7 cut(s)	131, 296, 865, 1008, 1587, 1598, 2262
RsaNI	GTAC	7 cut(s)	130, 295, 864, 1007, 1586, 1597, 2261
RseI	CAYNNNNRTG	3 cut(s)	223, 606, 1692
SaqAI	TTAA	7 cut(s)	5, 389, 705, 1190, 1208, 1704, 2046
SatI	GCNGC	6 cut(s)	205, 304, 819, 1002, 1877, 1961
Sau3AI	GATC	6 cut(s)	776, 1254, 1335, 1577, 2062, 2139
Sau96I	GGNCC	2 cut(s)	229, 1711
ScaI	AGTACT	2 cut(s)	1008, 2262
SchI	GAGTC	3 cut(s)	803, 1025, 1135
ScrFI	CCNGG	5 cut(s)	977, 1520, 1647, 1860, 2002
SduI	GDGCHC	2 cut(s)	1490, 2023
SexAI	ACCWGGT	1 cut(s)	975
SfaNI	GCATC	6 cut(s)	312, 609, 1656, 1740, 1861, 2020
SfcI	CTRYAG	3 cut(s)	180, 1002, 2189
SfuI	TTCGAA	2 cut(s)	2007, 2215
SinI	GGWCC	1 cut(s)	229
SmiMI	CAYNNNNRTG	3 cut(s)	223, 606, 1692
SmlI	CTYRAG	2 cut(s)	436, 1964
SmoI	CTYRAG	2 cut(s)	436, 1964
SnaBI	TACGTA	1 cut(s)	1600
SpeI	ACTAGT	1 cut(s)	1232
SseBI	AGGCCT	1 cut(s)	1905
SsiI	CCGC	3 cut(s)	304, 869, 2162
SspI	AATATT	1 cut(s)	1461
SspMI	CTAG	2 cut(s)	927, 1233
StuI	AGGCCT	1 cut(s)	1905
StyD4I	CCNGG	5 cut(s)	975, 1518, 1645, 1858, 2000
StyI	CCWWGG	2 cut(s)	357, 1906
TaaI	ACNGT	4 cut(s)	432, 1510, 1896, 1948
TaiI	ACGT	4 cut(s)	216, 296, 1602, 1938
TaqI	TCGA	2 cut(s)	2007, 2215
TatI	WGTACW	2 cut(s)	1006, 2260
TauI	GCSGC	1 cut(s)	306
TfiI	GAWTC	6 cut(s)	764, 803, 923, 1569, 2106, 2212
Tru1I	TTAA	7 cut(s)	5, 389, 705, 1190, 1208, 1704, 2046
Tru9I	TTAA	7 cut(s)	5, 389, 705, 1190, 1208, 1704, 2046
TscAI	CASTG	3 cut(s)	546, 1788, 2032
TseFI	GTSAC	2 cut(s)	537, 1948
TseI	GCWGC	5 cut(s)	204, 818, 1001, 1876, 1960
Tsp45I	GTSAC	2 cut(s)	537, 1948
TspDTI	ATGAA	9 cut(s)	31, 494, 659, 1452, 1713, 1790, 2031, 2216, 2262
TspGWI	ACGGA	1 cut(s)	680
TspRI	CASTG	3 cut(s)	546, 1788, 2032
Van91I	CCANNNNNTGG	1 cut(s)	1838
VpaK11BI	GGWCC	1 cut(s)	229
VspI	ATTAAT	1 cut(s)	705
XapI	RAATTY	7 cut(s)	344, 850, 1186, 1616, 1882, 2038, 2114
XbaI	TCTAGA	1 cut(s)	926
XceI	RCATGY	3 cut(s)	509, 2074, 2174
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1780
XmiI	GTMKAC	2 cut(s)	563, 2188
XspI	CTAG	2 cut(s)	927, 1233
ZrmI	AGTACT	2 cut(s)	1008, 2262
Zsp2I	ATGCAT	3 cut(s)	289, 1152, 1854

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.