FvH4_6g07470

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0005149
Physical Location & Seq
Reverse (-)
4473736 .. 4481132
7397 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g07470.t1

Sequence Viewer

Length: 2985 bp
ATGGGGATCATCTCCAGGAAAATTTTCCCAGCATGTGGGAACATGTGTGTATGCTGCCCTGCTATGAGGTCAAGATCTAGACAACCTGTTAAGCGTTACAAAAAGCTGCTTGCAGAAATCTTCCCCAAGTCTCCTGATGGTCCTTCCAATGAAAGAAAGATTGTTAAGCTATGCGAATATGCTGCAAAGAATCCTTTTAGAATCCCTAAGATTGCCAAACATCTTGAAGATAGGTGTTACAAAGAGCTACGTCTTGAGCATGTGAAATTCATTAATATCGTTGCAGAGGCTTACAACAAGTTACTTTGCCTTTGTAAGAACCAGATGGCTTATTTTGCTGGGAGTGTACTAAATGTGGTCACTGAGCTTCTGGACAACTCTAAGCAAGATGCTCTCCGTATAATTGGATGCCAAACTCTGACGAGGTTCATCTCCAGTCAGACAGATGGAACTTATACACACAACATTGAGAGTTTGGTTCATAAAGTATGTGAGCTGGCACATGAGAGTGGTGAAGATATTCAAAAGCGCTGCTTGAGAGCATCAAGCTTGCAGTGCCTTTCAGCCATGATCCAATTCATGACTGAAGTTTCATATATCTTTGTTGATTTTGATGAGATTGTACATGCCACTTTGGATAACTATCAGCCTGATACACATAATGAAAATGGTGAGGGAGCAGAGTCGCATCATAATTGGGTGGATGAAGTAGTTAGAAGTGAAAGTAGAGTTGGTGCAATTGCTGGTGGGTATTCTAGCCCTAGTTGCAAGGTCATCAGGCCACGGCCAGAAAAGAAGGATCCTTCTCTTCTCACAAGAGAAGAGACAGAGACACCAAACACTTGGGCTCAAATTTGTATTCAGAGAATGATTGAATTAGCGAAGGAGAGCACAACAATGCGCCGGGTATTGGATCCAATGTTTGTGTACTTTGACTCTAGGCACCATTGGGTTCCTCGGCAAGGGTTAGCTATGATGGTTTTGTCTGATATGTCATACTTTTTGGAAACTTCAGGAAATCAGCAGATGATTTTAGCCTATGCGATCCGTCATCTTGACCACAAGAACGTTTCACATGATCCACAACTCAAATCTCACATCATTCAGGTTGCTAGTGCTTTGGCTTGCCAAATTCGATCTGGAACAGTGCTAGAGGAAATTGGATTTGTCTCTGACCTATGCAGGCACTTGAGGAAGAGTCTTCAAGCCACTGCTGAATCAGTTGGAGAGCAAGAGTCTAGCATTAATACCATGCTACAGAGTTCAATTGAAGATTGCTTATTAGAAATAGCTAGAGGAATTGGAAATATTCGGCCATTGTTTGACATGATGTCAATATCTCTGGAGAAGCTACCATCTGGAACTGTTGCCAGGGCCACCATGGGATCATTGATGATTGTTGCTCATATGATCTCATTAGCATTGATCTCTTCTCAGTCACAGCAACTTCTGAAAGTGATGATGCATCCAGATGTTGAGGTGCGTGTTGGAGCACACCAAATATTTTCGGTTCTTCTCATTCCATGTTCTAATCGGCCCCGACATGAAGTCGCTCCTCTACAATCTGGGTTTGTATACCAGTCAAGAAAAGGGAGTTTGGATACAGCTTCTATTGCTTCAATTACAGCTAGACTTGAAAAGCTTAGGAGGGAAAAAGATGGCCCTAAAACAGAAAATCAGGAGACTGGTGCTCGTGATGATTTTATAGATAGGGATATTGCAGAAGAGGATTGGAAGCAGGGGCTTACCCTCAAGAGTTCCCCTAACTTCTATACAATTAGCTCTATTATTGACAAGACTGCTGGATCAAGCCTAACAGACCCTGAACCATACATAATGAAGTTTAGTGAGGATCAAATAGCAGACTTGCTGTCTGCTTTTTGGATGCAAGCCAATCTCCCAGATAATTTGCCTTCAAATTTTGAAGCTATAGCTCATTCTTTCATTTTAATGATAGTTTCTTCTCACTTGAAGAATCCAAATGGCAACCTTATGGTCCGTTCCTTTCAACTTCTGCTATCTCTGAGGAATATTTCACTGGATCCTAACAATGGGATGTTGCCCCCAGCTTGCCAGAGATCTATCCTTGTGCTATCGATTGGCATGTTGATGTTTGCTGCTCAGATCTATCACATTCCTAATCTGAATGATCTGCTCAAATCATTACCATCAGATGTTGATCCATATTTGGGCATCAGTGATGACCTTCAAGTTTTTCTAAGGCCTGAGGCAGACATCACAAAATATGGATCTGTTATCGATAACCAGCTAGCTACATCATTACTATCTGATTTGCGGAAAAAAATTTATGAATCTGACAATGTCATCAGGGAAATTTTGGTCCAATTTCTATCAGACATTACTGAGATGGAGGCGGAGGTGGTGGCCGACCAACTTTCAGAGTCATTCACTCCTGATGATGCATTTATGTTTGGTCCACAATCAATGCTAGACTTTGACCAAAATCAAATGCCTGGCCATTCAAAAGAAACGCTTTCCTTTGATGGGGAATTTCCGACCAATTCATCAGTTGAGGATGATGCAACAAGTGAAGTATCTGTTGTTGCTGACTTCTCCCGGTTCATTCCTAGAATGCCGTCATCATCTTCTGTCCCCCAAGTCATCAGTGTTGGACAGCTTTTGGAATCGGCACTTGAGGTAGCTGGTCAAGTAGCGGGAACATCTGTATCTACATCACCCCTCCCATACAACACCATGACAAAACAGTGTGAGGCCCTTGGCACAGGCACAAGGAAGAAGCTTTCTAATTGGTTGGCCCATGAACATCATCAAAGCAGTACTGTCCGTGACATTTTGTCTCCACCATTTCCCGCAGGTGGATGCACAGCACTCCAGAAGTTAATTAATGAACCTGGACCTGGGGTTACCCAGGGAGGTACATCAGCACAGGACTCGTGGTTAGCTGCTATCAGGTTGCCTCCTGCTAGTCCGTTTGACAACTTCCTCAAGGCAGCTGGTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

995

Amino Acids

110.43

Weight (kDa)

5.71

Isoelectric Point (pI)

49.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EFR3_ARM PF21052 65 - 159 2.9e-21 EFR3, armadillo repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2825
Acc36I ACCTGC 1 cut(s) 2825
AccB1I GGYRCC 1 cut(s) 942
AccB7I CCANNNNNTGG 1 cut(s) 35
AccI GTMKAC 1 cut(s) 1575
AciI CCGC 4 cut(s) 2296, 2375, 2675, 2832
AclI AACGTT 1 cut(s) 1068
AcoI YGGCCR 4 cut(s) 785, 1313, 2385, 2476
AcsI RAATTY 8 cut(s) 21, 266, 852, 1131, 1918, 2304, 2334, 2510
AcuI CTGAAG 2 cut(s) 606, 996
AfaI GTAC 5 cut(s) 348, 624, 929, 2800, 2899
AfeI AGCGCT 1 cut(s) 530
AfiI CCNNNNNNNGG 8 cut(s) 35, 910, 962, 2051, 2189, 2505, 2837, 2879
AflIII ACRYGT 1 cut(s) 42
AhdI GACNNNNNGTC 4 cut(s) 1330, 1547, 1870, 2815
AjnI CCWGG 6 cut(s) 14, 1370, 2473, 2872, 2878, 2889
AjuI GAANNNNNNNTTGG 2 cut(s) 714, 746
Alw21I GWGCWC 3 cut(s) 893, 1495, 1693
Alw26I GTCTC 6 cut(s) 135, 818, 824, 1174, 1676, 2823
AlwNI CAGNNNCTG 1 cut(s) 1823
Aor51HI AGCGCT 1 cut(s) 530
ApeKI GCWGC 7 cut(s) 54, 106, 182, 531, 2117, 2924, 2972
ApoI RAATTY 8 cut(s) 21, 266, 852, 1131, 1918, 2304, 2334, 2510
AseI ATTAAT 3 cut(s) 273, 1245, 2865
Asp700I GAANNNNTTC 2 cut(s) 23, 519
AspLEI GCGC 2 cut(s) 531, 903
AsuC2I CCSGG 2 cut(s) 905, 2578
AsuHPI GGTGA 3 cut(s) 524, 683, 2688
AsuNHI GCTAGC 1 cut(s) 2269
AvaII GGWCC 5 cut(s) 140, 1996, 2341, 2435, 2876
AxyI CCTNAGG 1 cut(s) 2226
BaeI ACNNNNGTAYC 2 cut(s) 2670, 2703
BalI TGGCCA 1 cut(s) 2478
BamHI GGATCC 3 cut(s) 799, 913, 2041
BanI GGYRCC 1 cut(s) 942
BanII GRGCYC 1 cut(s) 850
BauI CACGAG 2 cut(s) 1692, 2914
BbsI GAAGAC 1 cut(s) 1193
Bbv12I GWGCWC 3 cut(s) 893, 1495, 1693
BbvI GCAGC 6 cut(s) 41, 93, 169, 518, 2104, 2911
BccI CCATC 9 cut(s) 131, 319, 440, 970, 1363, 1652, 2176, 2362, 2498
BceAI ACGGC 2 cut(s) 800, 2581
BcgI CGANNNNNNTGC 4 cut(s) 164, 198, 2895, 2929
BciT130I CCWGG 6 cut(s) 16, 1372, 2475, 2874, 2880, 2891
BciVI GTATCC 1 cut(s) 1594
BcnI CCSGG 2 cut(s) 905, 2578
BcoDI GTCTC 6 cut(s) 135, 818, 824, 1174, 1676, 2823
BfmI CTRYAG 2 cut(s) 1256, 1929
BfoI RGCGCY 1 cut(s) 532
BfuAI ACCTGC 1 cut(s) 2825
BfuI GTATCC 1 cut(s) 1594
BglII AGATCT 3 cut(s) 74, 2078, 2124
BisI GCNGC 7 cut(s) 55, 107, 183, 532, 2118, 2925, 2973
BlsI GCNGC 7 cut(s) 56, 108, 184, 533, 2119, 2926, 2974
BmcAI AGTACT 1 cut(s) 2800
Bme1390I CCNGG 8 cut(s) 16, 905, 1372, 2475, 2578, 2874, 2880, 2891
Bme18I GGWCC 5 cut(s) 140, 1996, 2341, 2435, 2876
BmeRI GACNNNNNGTC 4 cut(s) 1330, 1547, 1870, 2815
BmiI GGNNCC 6 cut(s) 801, 915, 944, 954, 1538, 2043
BmrFI CCNGG 8 cut(s) 16, 905, 1372, 2475, 2578, 2874, 2880, 2891
BmtI GCTAGC 1 cut(s) 2273
BpiI GAAGAC 1 cut(s) 1193
BpmI CTGGAG 3 cut(s) 418, 1364, 2837
Bpu10I CCTNAGC 1 cut(s) 1643
BpuEI CTTGAG 6 cut(s) 275, 556, 1210, 1736, 2675, 2951
BpuMI CCSGG 2 cut(s) 905, 2578
Bsa29I ATCGAT 2 cut(s) 2096, 2259
BsaBI GATNNNNATC 2 cut(s) 642, 2178
BsaJI CCNNGG 8 cut(s) 782, 956, 1371, 1380, 2737, 2879, 2889, 2890
Bsc4I CCNNNNNNNGG 8 cut(s) 35, 910, 962, 2051, 2189, 2505, 2837, 2879
Bse1I ACTGG 4 cut(s) 435, 1579, 1690, 2043
Bse21I CCTNAGG 1 cut(s) 2226
Bse8I GATNNNNATC 2 cut(s) 642, 2178
BseBI CCWGG 6 cut(s) 16, 1372, 2475, 2874, 2880, 2891
BseCI ATCGAT 2 cut(s) 2096, 2259
BseDI CCNNGG 8 cut(s) 782, 956, 1371, 1380, 2737, 2879, 2889, 2890
BseGI GGATG 7 cut(s) 413, 709, 1465, 1890, 2061, 2542, 2846
BseJI GATNNNNATC 2 cut(s) 642, 2178
BseLI CCNNNNNNNGG 8 cut(s) 35, 910, 962, 2051, 2189, 2505, 2837, 2879
BseMII CTCAG 6 cut(s) 354, 1448, 2015, 2135, 2217, 2355
BseNI ACTGG 4 cut(s) 435, 1579, 1690, 2043
BseRI GAGGAG 1 cut(s) 1545
BseXI GCAGC 6 cut(s) 41, 93, 169, 518, 2104, 2911
BseYI CCCAGC 3 cut(s) 28, 338, 2065
BshNI GGYRCC 1 cut(s) 942
BshVI ATCGAT 2 cut(s) 2096, 2259
BsiHKAI GWGCWC 3 cut(s) 893, 1495, 1693
BsiSI CCGG 2 cut(s) 904, 2578
BslFI GGGAC 1 cut(s) 2597
BslI CCNNNNNNNGG 8 cut(s) 35, 910, 962, 2051, 2189, 2505, 2837, 2879
BsmAI GTCTC 6 cut(s) 135, 818, 824, 1174, 1676, 2823
BsmFI GGGAC 1 cut(s) 2597
BsmI GAATGC 1 cut(s) 2598
Bsp1286I GDGCHC 4 cut(s) 850, 893, 1495, 1693
Bsp1407I TGTACA 1 cut(s) 622
Bsp19I CCATGG 1 cut(s) 1380
BspACI CCGC 4 cut(s) 2296, 2375, 2675, 2832
BspCNI CTCAG 6 cut(s) 355, 1447, 2016, 2134, 2218, 2356
BspDI ATCGAT 2 cut(s) 2096, 2259
BspHI TCATGA 1 cut(s) 579
BspLI GGNNCC 6 cut(s) 801, 915, 944, 954, 1538, 2043
BspMI ACCTGC 1 cut(s) 2825
BspOI GCTAGC 1 cut(s) 2273
BspT107I GGYRCC 1 cut(s) 942
BsrGI TGTACA 1 cut(s) 622
BsrI ACTGG 4 cut(s) 435, 1579, 1690, 2043
BssECI CCNNGG 8 cut(s) 782, 956, 1371, 1380, 2737, 2879, 2889, 2890
BssNAI GTATAC 1 cut(s) 1576
BssSI CACGAG 2 cut(s) 1692, 2914
BssT1I CCWWGG 2 cut(s) 1380, 2737
Bst1107I GTATAC 1 cut(s) 1576
Bst2BI CACGAG 2 cut(s) 1692, 2914
Bst2UI CCWGG 6 cut(s) 16, 1372, 2475, 2874, 2880, 2891
Bst4CI ACNGT 4 cut(s) 1147, 1366, 2727, 2803
Bst6I CTCTTC 5 cut(s) 813, 816, 1190, 1435, 1719
BstAUI TGTACA 1 cut(s) 622
BstC8I GCNNGC 8 cut(s) 111, 498, 551, 1126, 1184, 1890, 2071, 2271
BstDSI CCRYGG 2 cut(s) 782, 1380
BstEII GGTNACC 1 cut(s) 2884
BstENI CCTNNNNNAGG 1 cut(s) 960
BstF5I GGATG 7 cut(s) 413, 709, 1465, 1890, 2061, 2542, 2846
BstH2I RGCGCY 1 cut(s) 532
BstHHI GCGC 2 cut(s) 531, 903
BstMAI GTCTC 6 cut(s) 135, 818, 824, 1174, 1676, 2823
BstMWI GCNNNNNNNGC 4 cut(s) 335, 555, 765, 1613
BstNI CCWGG 6 cut(s) 16, 1372, 2475, 2874, 2880, 2891
BstNSI RCATGY 5 cut(s) 36, 46, 263, 629, 2107
BstPI GGTNACC 1 cut(s) 2884
BstSCI CCNGG 8 cut(s) 14, 903, 1370, 2473, 2576, 2872, 2878, 2889
BstSFI CTRYAG 2 cut(s) 1256, 1929
BstV1I GCAGC 6 cut(s) 41, 93, 169, 518, 2104, 2911
BstV2I GAAGAC 1 cut(s) 1193
BstX2I RGATCY 7 cut(s) 74, 799, 913, 2041, 2078, 2124, 2249
BstXI CCANNNNNNTGG 1 cut(s) 843
BstYI RGATCY 7 cut(s) 74, 799, 913, 2041, 2078, 2124, 2249
BstZ17I GTATAC 1 cut(s) 1576
Bsu15I ATCGAT 2 cut(s) 2096, 2259
Bsu36I CCTNAGG 1 cut(s) 2226
BsuI GTATCC 1 cut(s) 1594
BsuTUI ATCGAT 2 cut(s) 2096, 2259
BtgI CCRYGG 2 cut(s) 782, 1380
BtsCI GGATG 7 cut(s) 413, 709, 1465, 1890, 2061, 2542, 2846
BtsI GCAGTG 2 cut(s) 560, 1209
BtsIMutI CAGTG 8 cut(s) 360, 560, 1152, 1209, 2036, 2203, 2632, 2732
BveI ACCTGC 1 cut(s) 2825
Cac8I GCNNGC 8 cut(s) 111, 498, 551, 1126, 1184, 1890, 2071, 2271
CaiI CAGNNNCTG 1 cut(s) 1823
CciI TCATGA 1 cut(s) 579
CfoI GCGC 2 cut(s) 531, 903
ClaI ATCGAT 2 cut(s) 2096, 2259
Csp6I GTAC 5 cut(s) 347, 623, 928, 2799, 2898
CviQI GTAC 5 cut(s) 347, 623, 928, 2799, 2898
DriI GACNNNNNGTC 4 cut(s) 1330, 1547, 1870, 2815
EaeI YGGCCR 4 cut(s) 785, 1313, 2385, 2476
Eam1104I CTCTTC 5 cut(s) 813, 816, 1190, 1435, 1719
Eam1105I GACNNNNNGTC 4 cut(s) 1330, 1547, 1870, 2815
EarI CTCTTC 5 cut(s) 813, 816, 1190, 1435, 1719
EciI GGCGGA 1 cut(s) 2390
Eco130I CCWWGG 2 cut(s) 1380, 2737
Eco147I AGGCCT 1 cut(s) 2224
Eco24I GRGCYC 1 cut(s) 850
Eco47I GGWCC 5 cut(s) 140, 1996, 2341, 2435, 2876
Eco47III AGCGCT 1 cut(s) 530
Eco57I CTGAAG 2 cut(s) 606, 996
Eco81I CCTNAGG 1 cut(s) 2226
Eco91I GGTNACC 1 cut(s) 2884
EcoNI CCTNNNNNAGG 1 cut(s) 960
EcoO109I RGGNCCY 1 cut(s) 2734
EcoO65I GGTNACC 1 cut(s) 2884
EcoRII CCWGG 6 cut(s) 14, 1370, 2473, 2872, 2878, 2889
EcoT14I CCWWGG 2 cut(s) 1380, 2737
EcoT22I ATGCAT 2 cut(s) 1467, 2425
EcoT38I GRGCYC 1 cut(s) 850
ErhI CCWWGG 2 cut(s) 1380, 2737
FalI AAGNNNNNCTT 4 cut(s) 518, 550, 2478, 2510
FaqI GGGAC 1 cut(s) 2597
FauI CCCGC 2 cut(s) 2668, 2839
FauNDI CATATG 1 cut(s) 1407
FblI GTMKAC 1 cut(s) 1575
Fnu4HI GCNGC 7 cut(s) 55, 107, 183, 532, 2118, 2925, 2973
FokI GGATG 7 cut(s) 420, 716, 1452, 1897, 2068, 2549, 2853
FriOI GRGCYC 1 cut(s) 850
Fsp4HI GCNGC 7 cut(s) 55, 107, 183, 532, 2118, 2925, 2973
GlaI GCGC 2 cut(s) 530, 902
GluI GCNGC 7 cut(s) 55, 107, 183, 532, 2118, 2925, 2973
GsaI CCCAGC 3 cut(s) 32, 342, 2069
GsuI CTGGAG 3 cut(s) 418, 1364, 2837
HaeII RGCGCY 1 cut(s) 532
HapII CCGG 2 cut(s) 904, 2578
HhaI GCGC 2 cut(s) 531, 903
Hin6I GCGC 2 cut(s) 529, 901
HinP1I GCGC 2 cut(s) 529, 901
HindIII AAGCTT 3 cut(s) 547, 1640, 2759
HpaII CCGG 2 cut(s) 904, 2578
HphI GGTGA 3 cut(s) 524, 683, 2688
Hpy166II GTNNAC 4 cut(s) 347, 928, 1576, 2438
Hpy8I GTNNAC 4 cut(s) 347, 928, 1576, 2438
HpyAV CCTTC 6 cut(s) 153, 790, 813, 877, 1923, 2216
HpyCH4III ACNGT 4 cut(s) 1147, 1366, 2727, 2803
HpyCH4IV ACGT 2 cut(s) 250, 1068
HpyF10VI GCNNNNNNNGC 4 cut(s) 335, 555, 765, 1613
HpySE526I ACGT 2 cut(s) 250, 1068
HspAI GCGC 2 cut(s) 529, 901
LmnI GCTCC 3 cut(s) 677, 1490, 1558
Lsp1109I GCAGC 6 cut(s) 41, 93, 169, 518, 2104, 2911
MaeII ACGT 2 cut(s) 250, 1068
MaeIII GTNAC 7 cut(s) 95, 236, 300, 358, 1437, 2807, 2884
MfeI CAATTG 2 cut(s) 738, 1266
MflI RGATCY 7 cut(s) 74, 799, 913, 2041, 2078, 2124, 2249
MhlI GDGCHC 4 cut(s) 850, 893, 1495, 1693
MlsI TGGCCA 1 cut(s) 2478
MluNI TGGCCA 1 cut(s) 2478
MlyI GAGTC 6 cut(s) 692, 929, 1207, 1244, 2411, 2906
MmeI TCCRAC 4 cut(s) 1204, 1468, 2540, 2611
Mox20I TGGCCA 1 cut(s) 2478
Mph1103I ATGCAT 2 cut(s) 1467, 2425
MroXI GAANNNNTTC 2 cut(s) 23, 519
MscI TGGCCA 1 cut(s) 2478
MseI TTAA 7 cut(s) 90, 165, 273, 1245, 1949, 2861, 2865
MslI CAYNNNNRTG 5 cut(s) 507, 896, 1470, 1949, 2108
Msp20I TGGCCA 1 cut(s) 2478
MspA1I CMGCKG 1 cut(s) 2975
MspI CCGG 2 cut(s) 904, 2578
MspR9I CCNGG 8 cut(s) 16, 905, 1372, 2475, 2578, 2874, 2880, 2891
MunI CAATTG 2 cut(s) 738, 1266
Mva1269I GAATGC 1 cut(s) 2598
MvaI CCWGG 6 cut(s) 16, 1372, 2475, 2874, 2880, 2891
MwoI GCNNNNNNNGC 4 cut(s) 335, 555, 765, 1613
NciI CCSGG 2 cut(s) 905, 2578
NcoI CCATGG 1 cut(s) 1380
NdeI CATATG 1 cut(s) 1407
NheI GCTAGC 1 cut(s) 2269
NlaIV GGNNCC 6 cut(s) 801, 915, 944, 954, 1538, 2043
NmeAIII GCCGAG 1 cut(s) 937
NmuCI GTSAC 3 cut(s) 358, 1437, 2807
NsiI ATGCAT 2 cut(s) 1467, 2425
NspI RCATGY 5 cut(s) 36, 46, 263, 629, 2107
PacI TTAATTAA 1 cut(s) 2865
PagI TCATGA 1 cut(s) 579
PaqCI CACCTGC 1 cut(s) 2825
PasI CCCWGGG 1 cut(s) 2890
PceI AGGCCT 1 cut(s) 2224
PciI ACATGT 1 cut(s) 42
PctI GAATGC 1 cut(s) 2598
PdmI GAANNNNTTC 2 cut(s) 23, 519
PfeI GAWTC 6 cut(s) 190, 201, 1217, 1975, 2312, 2645
PflFI GACNNNGTC 1 cut(s) 2321
PflMI CCANNNNNTGG 1 cut(s) 35
PfoI TCCNGGA 1 cut(s) 14
PkrI GCNGC 7 cut(s) 56, 108, 184, 533, 2119, 2926, 2974
PleI GAGTC 6 cut(s) 691, 929, 1206, 1243, 2410, 2906
PpsI GAGTC 6 cut(s) 691, 929, 1206, 1243, 2410, 2906
PscI ACATGT 1 cut(s) 42
PshBI ATTAAT 3 cut(s) 273, 1245, 2865
Psp1406I AACGTT 1 cut(s) 1068
Psp6I CCWGG 6 cut(s) 14, 1370, 2473, 2872, 2878, 2889
PspEI GGTNACC 1 cut(s) 2884
PspFI CCCAGC 3 cut(s) 28, 338, 2065
PspGI CCWGG 6 cut(s) 14, 1370, 2473, 2872, 2878, 2889
PspN4I GGNNCC 6 cut(s) 801, 915, 944, 954, 1538, 2043
PstNI CAGNNNCTG 1 cut(s) 1823
PsuI RGATCY 7 cut(s) 74, 799, 913, 2041, 2078, 2124, 2249
PsyI GACNNNGTC 1 cut(s) 2321
PvuII CAGCTG 1 cut(s) 2975
RsaI GTAC 5 cut(s) 348, 624, 929, 2800, 2899
RsaNI GTAC 5 cut(s) 347, 623, 928, 2799, 2898
RseI CAYNNNNRTG 5 cut(s) 507, 896, 1470, 1949, 2108
SaqAI TTAA 7 cut(s) 90, 165, 273, 1245, 1949, 2861, 2865
SatI GCNGC 7 cut(s) 55, 107, 183, 532, 2118, 2925, 2973
ScaI AGTACT 1 cut(s) 2800
SchI GAGTC 6 cut(s) 692, 929, 1207, 1244, 2411, 2906
ScrFI CCNGG 8 cut(s) 16, 905, 1372, 2475, 2578, 2874, 2880, 2891
SduI GDGCHC 4 cut(s) 850, 893, 1495, 1693
SfcI CTRYAG 2 cut(s) 1256, 1929
SinI GGWCC 5 cut(s) 140, 1996, 2341, 2435, 2876
SmiMI CAYNNNNRTG 5 cut(s) 507, 896, 1470, 1949, 2108
SmlI CTYRAG 6 cut(s) 254, 535, 1189, 1751, 2654, 2966
SmoI CTYRAG 6 cut(s) 254, 535, 1189, 1751, 2654, 2966
SseBI AGGCCT 1 cut(s) 2224
SsiI CCGC 4 cut(s) 2296, 2375, 2675, 2832
SspI AATATT 3 cut(s) 1309, 1503, 2032
StuI AGGCCT 1 cut(s) 2224
StyD4I CCNGG 8 cut(s) 14, 903, 1370, 2473, 2576, 2872, 2878, 2889
StyI CCWWGG 2 cut(s) 1380, 2737
TaaI ACNGT 4 cut(s) 1147, 1366, 2727, 2803
TaiI ACGT 2 cut(s) 253, 1071
TaqI TCGA 3 cut(s) 1135, 2096, 2259
TatI WGTACW 4 cut(s) 346, 622, 927, 2798
TfiI GAWTC 6 cut(s) 190, 201, 1217, 1975, 2312, 2645
Tru1I TTAA 7 cut(s) 90, 165, 273, 1245, 1949, 2861, 2865
Tru9I TTAA 7 cut(s) 90, 165, 273, 1245, 1949, 2861, 2865
TscAI CASTG 8 cut(s) 367, 560, 1152, 1216, 2043, 2203, 2632, 2732
TseFI GTSAC 3 cut(s) 358, 1437, 2807
TseI GCWGC 7 cut(s) 54, 106, 182, 531, 2117, 2924, 2972
Tsp45I GTSAC 3 cut(s) 358, 1437, 2807
TspGWI ACGGA 5 cut(s) 386, 1037, 1988, 2795, 2940
TspRI CASTG 8 cut(s) 367, 560, 1152, 1216, 2043, 2203, 2632, 2732
Tth111I GACNNNGTC 1 cut(s) 2321
Van91I CCANNNNNTGG 1 cut(s) 35
VpaK11BI GGWCC 5 cut(s) 140, 1996, 2341, 2435, 2876
VspI ATTAAT 3 cut(s) 273, 1245, 2865
XagI CCTNNNNNAGG 1 cut(s) 960
XapI RAATTY 8 cut(s) 21, 266, 852, 1131, 1918, 2304, 2334, 2510
XbaI TCTAGA 1 cut(s) 77
XceI RCATGY 5 cut(s) 36, 46, 263, 629, 2107
XcmI CCANNNNNNNNNTGG 2 cut(s) 1136, 1378
XmiI GTMKAC 1 cut(s) 1575
XmnI GAANNNNTTC 2 cut(s) 23, 519
ZrmI AGTACT 1 cut(s) 2800
Zsp2I ATGCAT 2 cut(s) 1467, 2425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.