FvH4_6g10640
NAC Family

Probably inactive leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0003416
Physical Location & Seq
Forward (+)
6381462 .. 6384681
3220 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g10640.t1

Sequence Viewer

Length: 2445 bp
ATGGAAAATAAGTTCATCTATGCCTTACTCTTTGTTCAGCTTCTTGTTTTCACTTATAGACCTGTTCTGGGAGGAGGGGATGGAGTAGTTGTCACCCGAGCTGATTATCTAGCACTTCGAGCATTCAAGCAAGAGCTTATTGATTTCAAAGGCTTGTTGCGCAGCTGGAATGACAGTGGCTCTGGAGTTTGCTCAGGTGGGTGGGCTGGAATCAAGTGTGTCAAGGGGCAGGTCATTGCAATCCAGCTTCCATGGAAGAGACTAGGGGGCAGAATCTCCGAGAAGATTGGGCAGCTTCAAGGGCTTCGAAAGCTCAGCCTGCATGACAATGTCTTAGGTGGCCCTGTCCCTTTGGCTCTGGGATTGCTCCCCAATCTCAGAGGGGTGTACCTCTTCAATAACCGGCTTTCTGGTACTGTCCCTGCTTCAATCGGTAACTGTCATCTTCTTCAAACTCTTGATTTGAGCAACAATGCACTTAATGGTTCTATTCCTAGTCTTGCAAACTCCACTAGGTTGTTTAGACTTAATTTGAGCTTCAATTCATTTTCTGGTTCAATCCCAACTAGTCTCACTAGGTCAAGTTCCCTAATCTTTCTTGCTCTCCAACACAACAATCTCTCTGGTTCTATTCCCAGCACTTGGGTTGGAACAAACAGAACTTACCAGCTTAAGTCCTTGAGCCTTGACCATAATCTCATCTCTGGAGCTATTCCAAGCTCTCTGAGTAAGTTGGGTTTTCTTGAAGAGATTTCTCTAAGCAATAACCAGATTACAGGAACCATACCCAATGAACTAGGGGAGCTCCCAAGGCTCCAAAAGCTAGACTTATCCGACAATGCCATCAATGGAAGCATCCCAGCTAGCTTTTCCAATCTCTCATCGATTGTGTCATTGAATCTAGAAGGCAATCGCCTTGATAACCAAATCCCACAAGTCTTGGAAAAATTGCAGAATCTCTCAGTACTTAATCTGAGGAGTAATAAGTTCAGTGGTCATATTCCTGCTTCTATTGGGAATATCTCTGGGATTAACCAAGTTGATTTATCCGAAAACAATTTCACTGGAGAAATTCCCGCTTCATTTTCCAGCCTAGCCAATCTCACTTCCTTCAATGTTTCTTACAACAATCTGTCTGGCTTAGTCCCATCTCTCCTATCCCAAAAGTTCAATTCCAGCTCCTTTGTGGGGAATCTCCAGCTATGTGGGTATAGTGCTTCAACTCAGTGTTCTTCTCCACCACCTAAGAATCTTACAGTTCCAACAATAGAGCCTTTGAAGAAAAAGCATCACCACAGACTGAGTACAAAGGACATAATTCTCATAGCAGTAGGTGTCGTCCTAGCAGTTCTGCTTCTACTCTGCTGCTGTTTGCTGCTATGTTTGATTAGGAAAAGATCTGTACTGAAAGGAAATAATAGTAAGACCGCCAACCAATCGGCCACTGGGAGTATTGACAAGGCAGTGCCTGCAGGCGCTGTGGTTTCATCTGGCGGCGAAGCTGGTGGGAAGCTTGTTCATTTTGATGGGCCATTTGTGTTTACTGCTGATGATCTATTGTGTGCCACTGCCGAGATAATGGGGAAGAGTACCTATGGGACTGCATATAAGGCAACATTGGAGGAGGGCAATCAAGTTGCAGTGAAGAGGTTGAGGGAAAAGACTACAAAGGGTCACAAGGAGTTTGAAACTGAAGCTGCAGCAATTGGGAAGATTCGGCACCCAAATCTCTTAGCTCTCAGGGCCTATTACTTGGGTCCCAAGGGAGAGAAGCTCCTTGTCTTTGATTTCATGCCTAAGGGAAGTCTTGCATCATTTCTTCATGCTCGCGGACCAGAAATGGTCATTGATTGGCCAACAAGGATGAACATAGCCATTGGAGTCACAAGAGGACTATGCCATCTCCACAACCAGGAGAACATCATACATGGGAATCTCACATCCAGCAACATACTACTTGATGAGCAGACCAACGCTCACATTGCAGACTATGGCCTTTCTCGCCTCATGACCCCAGCCGCCAACACCAATGTGATTGCCACAGCAGGAACCCTCGGCTACAATGCACCAGAGCTCTCAAAGACCAAGAAGAGTACAGAAAAGACTGATGTCTACAGCCTTGGAGTGATCATATTGGAGCTCCTAACAGGAAAATCGCCTGGAGAGCCAATGAATGGTATGGACTTGCCACAGTGGGTGGCGTCGATTGTTAAAGAGGAGTGGACTAATGAAGTTTTTGATTTGGAGCTTATAAGGGATGTTCCAATCATAGGTGATCAGCTGCTTAACACATTGAAGTTGGCTCTGCATTGTGTGGATCCCACACCAGCTGCAAGACCAGAGGCGCAGCAAGTTCTGCAGCAGCTAGAAGAGATTAAGCCGCCTGAGGCAAATGTTGGTTCTGCTGAAGAAGGAACAGAAGCACCAGCATCAGCAACTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0009505 GO:0009506 GO:0016020 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

815

Amino Acids

87.51

Weight (kDa)

8.44

Isoelectric Point (pI)

34.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 73 1.9e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 180 - 377 4.1e-10 Leucine-rich repeat region
LRR_8 PF13855 223 - 282 3.6e-10 Leucine rich repeat
LRR_4 PF12799 248 - 282 1.3e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 269 - 306 2.9e-07 Leucine rich repeat
Pkinase PF00069 524 - 788 1e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 525 - 789 3e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2252
Acc16I TGCGCA 1 cut(s) 161
Acc36I ACCTGC 1 cut(s) 220
AccB1I GGYRCC 1 cut(s) 1719
AccB7I CCANNNNNTGG 2 cut(s) 642, 2174
AccI GTMKAC 1 cut(s) 2112
AccII CGCG 1 cut(s) 1830
AciI CCGC 6 cut(s) 1077, 1428, 1494, 1830, 2019, 2381
AclWI GGATC 2 cut(s) 2312, 2325
AcoI YGGCCR 2 cut(s) 1440, 1853
AcsI RAATTY 1 cut(s) 1071
AcuI CTGAAG 2 cut(s) 1713, 2427
AcyI GRCGYC 1 cut(s) 2201
AfaI GTAC 7 cut(s) 389, 415, 966, 1306, 1404, 1591, 2095
AfiI CCNNNNNNNGG 6 cut(s) 68, 642, 1188, 1912, 2174, 2270
AflII CTTAAG 1 cut(s) 671
AhlI ACTAGT 1 cut(s) 566
AjnI CCWGG 2 cut(s) 1911, 2158
AleI CACNNNNGTG 1 cut(s) 2030
AloI GAACNNNNNNTCC 1 cut(s) 28
Alw21I GWGCWC 3 cut(s) 807, 2076, 2142
Alw26I GTCTC 2 cut(s) 253, 575
AlwI GGATC 2 cut(s) 2312, 2325
AlwNI CAGNNNCTG 3 cut(s) 1469, 1478, 2438
Ama87I CYCGRG 1 cut(s) 96
AoxI GGCC 6 cut(s) 340, 1440, 1529, 1743, 1853, 1993
ApoI RAATTY 1 cut(s) 1071
AspLEI GCGC 3 cut(s) 162, 1478, 2347
AspS9I GGNCC 5 cut(s) 341, 1529, 1743, 1757, 1832
AsuHPI GGTGA 3 cut(s) 85, 1283, 2285
AsuII TTCGAA 1 cut(s) 307
AsuNHI GCTAGC 1 cut(s) 863
AvaI CYCGRG 1 cut(s) 96
AvaII GGWCC 2 cut(s) 1757, 1832
AxyI CCTNAGG 2 cut(s) 1797, 2385
BalI TGGCCA 1 cut(s) 1855
BamHI GGATCC 1 cut(s) 2317
BanI GGYRCC 1 cut(s) 1719
BanII GRGCYC 3 cut(s) 807, 2076, 2142
Bbv12I GWGCWC 3 cut(s) 807, 2076, 2142
BccI CCATC 5 cut(s) 74, 851, 1156, 1520, 1908
BciT130I CCWGG 2 cut(s) 1913, 2160
BclI TGATCA 2 cut(s) 2127, 2275
BcoDI GTCTC 2 cut(s) 253, 575
BcuI ACTAGT 1 cut(s) 566
BfmI CTRYAG 4 cut(s) 1470, 1698, 2113, 2357
BfoI RGCGCY 1 cut(s) 1479
BfrI CTTAAG 1 cut(s) 671
BfuAI ACCTGC 1 cut(s) 220
BglII AGATCT 1 cut(s) 1397
BlpI GCTNAGC 1 cut(s) 314
BmcAI AGTACT 1 cut(s) 966
Bme1390I CCNGG 2 cut(s) 1913, 2160
Bme18I GGWCC 2 cut(s) 1757, 1832
BmeT110I CYCGRG 1 cut(s) 96
BmgT120I GGNCC 5 cut(s) 341, 1529, 1743, 1757, 1832
BmiI GGNNCC 7 cut(s) 781, 815, 1721, 1758, 1759, 2050, 2319
BmrFI CCNGG 2 cut(s) 1913, 2160
BmrI ACTGGG 1 cut(s) 1455
BmsI GCATC 4 cut(s) 864, 1297, 1820, 2438
BmtI GCTAGC 1 cut(s) 867
BmuI ACTGGG 1 cut(s) 1455
BoxI GACNNNNGTC 1 cut(s) 2108
BplI GAGNNNNNCTC 2 cut(s) 1758, 1790
BpmI CTGGAG 5 cut(s) 204, 726, 1086, 1181, 2181
Bpu10I CCTNAGC 1 cut(s) 193
Bpu1102I GCTNAGC 1 cut(s) 314
Bpu14I TTCGAA 1 cut(s) 307
BpuEI CTTGAG 1 cut(s) 700
Bsa29I ATCGAT 1 cut(s) 884
BsaHI GRCGYC 1 cut(s) 2201
BsaJI CCNNGG 5 cut(s) 251, 809, 1761, 2053, 2119
BsaXI ACNNNNNCTCC 2 cut(s) 75, 105
Bsc4I CCNNNNNNNGG 6 cut(s) 68, 642, 1188, 1912, 2174, 2270
Bse118I RCCGGY 1 cut(s) 402
Bse1I ACTGG 2 cut(s) 1069, 1450
Bse21I CCTNAGG 2 cut(s) 1797, 2385
Bse3DI GCAATG 2 cut(s) 234, 1980
BseBI CCWGG 2 cut(s) 1913, 2160
BseCI ATCGAT 1 cut(s) 884
BseDI CCNNGG 5 cut(s) 251, 809, 1761, 2053, 2119
BseGI GGATG 5 cut(s) 85, 855, 1869, 1940, 2263
BseLI CCNNNNNNNGG 6 cut(s) 68, 642, 1188, 1912, 2174, 2270
BseMI GCAATG 2 cut(s) 234, 1980
BseNI ACTGG 2 cut(s) 1069, 1450
BseRI GAGGAG 4 cut(s) 87, 991, 1637, 2231
BseYI CCCAGC 3 cut(s) 635, 859, 2014
Bsh1236I CGCG 1 cut(s) 1830
BshFI GGCC 6 cut(s) 342, 1442, 1531, 1745, 1855, 1995
BshNI GGYRCC 1 cut(s) 1719
BshVI ATCGAT 1 cut(s) 884
BsiHKAI GWGCWC 3 cut(s) 807, 2076, 2142
BsiHKCI CYCGRG 1 cut(s) 96
BsiSI CCGG 1 cut(s) 403
BslFI GGGAC 5 cut(s) 332, 404, 1130, 1612, 1743
BslI CCNNNNNNNGG 6 cut(s) 68, 642, 1188, 1912, 2174, 2270
BsmAI GTCTC 2 cut(s) 253, 575
BsmFI GGGAC 5 cut(s) 332, 404, 1130, 1612, 1743
BsmI GAATGC 1 cut(s) 122
BsnI GGCC 6 cut(s) 342, 1442, 1531, 1745, 1855, 1995
BsoBI CYCGRG 1 cut(s) 96
Bsp119I TTCGAA 1 cut(s) 307
Bsp1286I GDGCHC 3 cut(s) 807, 2076, 2142
Bsp143I GATC 5 cut(s) 1397, 1552, 2127, 2275, 2317
Bsp1720I GCTNAGC 1 cut(s) 314
Bsp19I CCATGG 1 cut(s) 251
BspACI CCGC 6 cut(s) 1077, 1428, 1494, 1830, 2019, 2381
BspANI GGCC 6 cut(s) 342, 1442, 1531, 1745, 1855, 1995
BspDI ATCGAT 1 cut(s) 884
BspFNI CGCG 1 cut(s) 1830
BspHI TCATGA 1 cut(s) 2007
BspLI GGNNCC 7 cut(s) 781, 815, 1721, 1758, 1759, 2050, 2319
BspMAI CTGCAG 3 cut(s) 1474, 1702, 2361
BspMI ACCTGC 1 cut(s) 220
BspOI GCTAGC 1 cut(s) 867
BspPI GGATC 2 cut(s) 2312, 2325
BspT104I TTCGAA 1 cut(s) 307
BspT107I GGYRCC 1 cut(s) 1719
BspTI CTTAAG 1 cut(s) 671
BsrDI GCAATG 2 cut(s) 234, 1980
BsrFI RCCGGY 1 cut(s) 402
BsrI ACTGG 2 cut(s) 1069, 1450
BssAI RCCGGY 1 cut(s) 402
BssECI CCNNGG 5 cut(s) 251, 809, 1761, 2053, 2119
BssMI GATC 5 cut(s) 1397, 1552, 2127, 2275, 2317
BssNI GRCGYC 1 cut(s) 2201
BssT1I CCWWGG 4 cut(s) 251, 809, 1761, 2119
Bst2UI CCWGG 2 cut(s) 1913, 2160
Bst4CI ACNGT 5 cut(s) 176, 418, 440, 1258, 2193
Bst6I CTCTTC 7 cut(s) 251, 398, 741, 1580, 1640, 2084, 2364
BstACI GRCGYC 1 cut(s) 2201
BstAFI CTTAAG 1 cut(s) 671
BstAPI GCANNNNNTGC 2 cut(s) 1469, 2356
BstBI TTCGAA 1 cut(s) 307
BstC8I GCNNGC 5 cut(s) 320, 865, 1470, 1474, 1828
BstDSI CCRYGG 1 cut(s) 251
BstF5I GGATG 5 cut(s) 85, 855, 1869, 1940, 2263
BstFNI CGCG 1 cut(s) 1830
BstH2I RGCGCY 1 cut(s) 1479
BstHHI GCGC 3 cut(s) 162, 1478, 2347
BstKTI GATC 5 cut(s) 1400, 1555, 2130, 2278, 2320
BstMAI GTCTC 2 cut(s) 253, 575
BstMBI GATC 5 cut(s) 1397, 1552, 2127, 2275, 2317
BstNI CCWGG 2 cut(s) 1913, 2160
BstPAI GACNNNNGTC 1 cut(s) 2108
BstSCI CCNGG 2 cut(s) 1911, 2158
BstSFI CTRYAG 4 cut(s) 1470, 1698, 2113, 2357
BstUI CGCG 1 cut(s) 1830
BstX2I RGATCY 2 cut(s) 1397, 2317
BstXI CCANNNNNNTGG 1 cut(s) 1205
BstYI RGATCY 2 cut(s) 1397, 2317
Bsu15I ATCGAT 1 cut(s) 884
Bsu36I CCTNAGG 2 cut(s) 1797, 2385
BsuRI GGCC 6 cut(s) 342, 1442, 1531, 1745, 1855, 1995
BsuTUI ATCGAT 1 cut(s) 884
BtgI CCRYGG 1 cut(s) 251
BtsCI GGATG 5 cut(s) 85, 855, 1869, 1940, 2263
BtsI GCAGTG 3 cut(s) 1470, 1566, 1647
BtsIMutI CAGTG 9 cut(s) 181, 997, 1062, 1232, 1443, 1470, 1566, 1647, 2198
BveI ACCTGC 1 cut(s) 220
Cac8I GCNNGC 5 cut(s) 320, 865, 1470, 1474, 1828
CaiI CAGNNNCTG 3 cut(s) 1469, 1478, 2438
CciI TCATGA 1 cut(s) 2007
CfoI GCGC 3 cut(s) 162, 1478, 2347
Cfr10I RCCGGY 1 cut(s) 402
Cfr13I GGNCC 5 cut(s) 341, 1529, 1743, 1757, 1832
ClaI ATCGAT 1 cut(s) 884
CseI GACGC 1 cut(s) 2190
Csp6I GTAC 7 cut(s) 388, 414, 965, 1305, 1403, 1590, 2094
CspCI CAANNNNNGTGG 2 cut(s) 921, 956
CviAII CATG 6 cut(s) 252, 323, 1792, 1823, 1928, 2008
CviQI GTAC 7 cut(s) 388, 414, 965, 1305, 1403, 1590, 2094
DpnI GATC 5 cut(s) 1399, 1554, 2129, 2277, 2319
DpnII GATC 5 cut(s) 1397, 1552, 2127, 2275, 2317
EaeI YGGCCR 2 cut(s) 1440, 1853
Eam1104I CTCTTC 7 cut(s) 251, 398, 741, 1580, 1640, 2084, 2364
EarI CTCTTC 7 cut(s) 251, 398, 741, 1580, 1640, 2084, 2364
Ecl136II GAGCTC 3 cut(s) 805, 2074, 2140
Eco130I CCWWGG 4 cut(s) 251, 809, 1761, 2119
Eco24I GRGCYC 3 cut(s) 807, 2076, 2142
Eco47I GGWCC 2 cut(s) 1757, 1832
Eco53kI GAGCTC 3 cut(s) 805, 2074, 2140
Eco57I CTGAAG 2 cut(s) 1713, 2427
Eco81I CCTNAGG 2 cut(s) 1797, 2385
Eco88I CYCGRG 1 cut(s) 96
EcoICRI GAGCTC 3 cut(s) 805, 2074, 2140
EcoO109I RGGNCCY 2 cut(s) 1743, 1757
EcoRII CCWGG 2 cut(s) 1911, 2158
EcoT14I CCWWGG 4 cut(s) 251, 809, 1761, 2119
EcoT38I GRGCYC 3 cut(s) 807, 2076, 2142
ErhI CCWWGG 4 cut(s) 251, 809, 1761, 2119
FaeI CATG 6 cut(s) 255, 326, 1795, 1826, 1931, 2011
FalI AAGNNNNNCTT 2 cut(s) 812, 844
FaqI GGGAC 5 cut(s) 332, 404, 1130, 1612, 1743
FatI CATG 6 cut(s) 251, 322, 1791, 1822, 1927, 2007
FauI CCCGC 1 cut(s) 1084
FbaI TGATCA 2 cut(s) 2127, 2275
FblI GTMKAC 1 cut(s) 2112
FokI GGATG 5 cut(s) 92, 842, 1876, 1927, 2270
FriOI GRGCYC 3 cut(s) 807, 2076, 2142
FspI TGCGCA 1 cut(s) 161
GlaI GCGC 3 cut(s) 161, 1477, 2346
GsaI CCCAGC 3 cut(s) 639, 863, 2018
GsuI CTGGAG 5 cut(s) 204, 726, 1086, 1181, 2181
HaeII RGCGCY 1 cut(s) 1479
HaeIII GGCC 6 cut(s) 342, 1442, 1531, 1745, 1855, 1995
HapII CCGG 1 cut(s) 403
HgaI GACGC 1 cut(s) 2190
HhaI GCGC 3 cut(s) 162, 1478, 2347
Hin1I GRCGYC 1 cut(s) 2201
Hin1II CATG 6 cut(s) 255, 326, 1795, 1826, 1931, 2011
Hin6I GCGC 3 cut(s) 160, 1476, 2345
HinP1I GCGC 3 cut(s) 160, 1476, 2345
HindIII AAGCTT 1 cut(s) 1511
HinfI GANTC 9 cut(s) 210, 273, 898, 955, 1192, 1249, 1714, 1881, 1933
HpaII CCGG 1 cut(s) 403
HphI GGTGA 3 cut(s) 85, 1283, 2285
Hpy166II GTNNAC 4 cut(s) 388, 1542, 2113, 2223
Hpy188I TCNGA 6 cut(s) 280, 380, 726, 835, 975, 1051
Hpy188III TCNNGA 6 cut(s) 183, 458, 705, 743, 902, 2008
Hpy8I GTNNAC 4 cut(s) 388, 1542, 2113, 2223
Hpy99I CGWCG 1 cut(s) 2206
HpyAV CCTTC 3 cut(s) 899, 1120, 2405
HpyCH4III ACNGT 5 cut(s) 176, 418, 440, 1258, 2193
Hsp92I GRCGYC 1 cut(s) 2201
Hsp92II CATG 6 cut(s) 255, 326, 1795, 1826, 1931, 2011
HspAI GCGC 3 cut(s) 160, 1476, 2345
KflI GGGWCCC 1 cut(s) 1757
Ksp22I TGATCA 2 cut(s) 2127, 2275
Kzo9I GATC 5 cut(s) 1397, 1552, 2127, 2275, 2317
LweI GCATC 4 cut(s) 864, 1297, 1820, 2438
MaeIII GTNAC 4 cut(s) 91, 434, 1673, 1882
MalI GATC 5 cut(s) 1399, 1554, 2129, 2277, 2319
MboI GATC 5 cut(s) 1397, 1552, 2127, 2275, 2317
MfeI CAATTG 1 cut(s) 1704
MflI RGATCY 2 cut(s) 1397, 2317
MhlI GDGCHC 3 cut(s) 807, 2076, 2142
MlsI TGGCCA 1 cut(s) 1855
MluCI AATT 8 cut(s) 529, 541, 947, 1057, 1071, 1171, 1317, 1704
MluNI TGGCCA 1 cut(s) 1855
MlyI GAGTC 1 cut(s) 1890
MmeI TCCRAC 4 cut(s) 628, 631, 858, 1286
Mox20I TGGCCA 1 cut(s) 1855
MscI TGGCCA 1 cut(s) 1855
MseI TTAA 8 cut(s) 480, 528, 672, 969, 1032, 2211, 2286, 2376
MslI CAYNNNNRTG 3 cut(s) 327, 1524, 2030
Msp20I TGGCCA 1 cut(s) 1855
MspA1I CMGCKG 3 cut(s) 165, 2281, 2330
MspCI CTTAAG 1 cut(s) 671
MspI CCGG 1 cut(s) 403
MspR9I CCNGG 2 cut(s) 1913, 2160
MunI CAATTG 1 cut(s) 1704
Mva1269I GAATGC 1 cut(s) 122
MvaI CCWGG 2 cut(s) 1913, 2160
MvnI CGCG 1 cut(s) 1830
NcoI CCATGG 1 cut(s) 251
NdeII GATC 5 cut(s) 1397, 1552, 2127, 2275, 2317
NheI GCTAGC 1 cut(s) 863
NlaIII CATG 6 cut(s) 255, 326, 1795, 1826, 1931, 2011
NlaIV GGNNCC 7 cut(s) 781, 815, 1721, 1758, 1759, 2050, 2319
NmeAIII GCCGAG 2 cut(s) 1597, 2034
NmuCI GTSAC 3 cut(s) 91, 1673, 1882
NsbI TGCGCA 1 cut(s) 161
NspV TTCGAA 1 cut(s) 307
OliI CACNNNNGTG 1 cut(s) 2030
PagI TCATGA 1 cut(s) 2007
PctI GAATGC 1 cut(s) 122
PfeI GAWTC 8 cut(s) 210, 273, 898, 955, 1192, 1249, 1714, 1933
PflFI GACNNNGTC 1 cut(s) 329
PflMI CCANNNNNTGG 2 cut(s) 642, 2174
PleI GAGTC 1 cut(s) 1889
PpsI GAGTC 1 cut(s) 1889
PpuMI RGGWCCY 1 cut(s) 1757
PshAI GACNNNNGTC 1 cut(s) 2108
PsiI TTATAA 1 cut(s) 2252
Psp124BI GAGCTC 3 cut(s) 807, 2076, 2142
Psp5II RGGWCCY 1 cut(s) 1757
Psp6I CCWGG 2 cut(s) 1911, 2158
PspFI CCCAGC 3 cut(s) 635, 859, 2014
PspGI CCWGG 2 cut(s) 1911, 2158
PspN4I GGNNCC 7 cut(s) 781, 815, 1721, 1758, 1759, 2050, 2319
PspPI GGNCC 5 cut(s) 341, 1529, 1743, 1757, 1832
PspPPI RGGWCCY 1 cut(s) 1757
PstI CTGCAG 3 cut(s) 1474, 1702, 2361
PstNI CAGNNNCTG 3 cut(s) 1469, 1478, 2438
PsuI RGATCY 2 cut(s) 1397, 2317
PsyI GACNNNGTC 1 cut(s) 329
PvuII CAGCTG 3 cut(s) 165, 2281, 2330
RsaI GTAC 7 cut(s) 389, 415, 966, 1306, 1404, 1591, 2095
RsaNI GTAC 7 cut(s) 388, 414, 965, 1305, 1403, 1590, 2094
RseI CAYNNNNRTG 3 cut(s) 327, 1524, 2030
SacI GAGCTC 3 cut(s) 807, 2076, 2142
SaqAI TTAA 8 cut(s) 480, 528, 672, 969, 1032, 2211, 2286, 2376
Sau3AI GATC 5 cut(s) 1397, 1552, 2127, 2275, 2317
Sau96I GGNCC 5 cut(s) 341, 1529, 1743, 1757, 1832
SbfI CCTGCAGG 1 cut(s) 1474
ScaI AGTACT 1 cut(s) 966
SchI GAGTC 1 cut(s) 1890
ScrFI CCNGG 2 cut(s) 1913, 2160
SdaI CCTGCAGG 1 cut(s) 1474
SduI GDGCHC 3 cut(s) 807, 2076, 2142
SfaNI GCATC 4 cut(s) 864, 1297, 1820, 2438
SfcI CTRYAG 4 cut(s) 1470, 1698, 2113, 2357
SfuI TTCGAA 1 cut(s) 307
SinI GGWCC 2 cut(s) 1757, 1832
SmiMI CAYNNNNRTG 3 cut(s) 327, 1524, 2030
SmlI CTYRAG 2 cut(s) 671, 679
SmoI CTYRAG 2 cut(s) 671, 679
SpeI ACTAGT 1 cut(s) 566
Sse8387I CCTGCAGG 1 cut(s) 1474
Sse9I AATT 8 cut(s) 529, 541, 947, 1057, 1071, 1171, 1317, 1704
SsiI CCGC 6 cut(s) 1077, 1428, 1494, 1830, 2019, 2381
SstI GAGCTC 3 cut(s) 807, 2076, 2142
StyD4I CCNGG 2 cut(s) 1911, 2158
StyI CCWWGG 4 cut(s) 251, 809, 1761, 2119
TaaI ACNGT 5 cut(s) 176, 418, 440, 1258, 2193
TaqI TCGA 4 cut(s) 118, 307, 884, 2204
TasI AATT 8 cut(s) 529, 541, 947, 1057, 1071, 1171, 1317, 1704
TatI WGTACW 4 cut(s) 964, 1304, 1402, 2093
TauI GCSGC 3 cut(s) 1497, 2021, 2383
TfiI GAWTC 8 cut(s) 210, 273, 898, 955, 1192, 1249, 1714, 1933
Tru1I TTAA 8 cut(s) 480, 528, 672, 969, 1032, 2211, 2286, 2376
Tru9I TTAA 8 cut(s) 480, 528, 672, 969, 1032, 2211, 2286, 2376
TscAI CASTG 9 cut(s) 181, 997, 1069, 1232, 1450, 1470, 1573, 1647, 2198
TseFI GTSAC 3 cut(s) 91, 1673, 1882
Tsp45I GTSAC 3 cut(s) 91, 1673, 1882
TspRI CASTG 9 cut(s) 181, 997, 1069, 1232, 1450, 1470, 1573, 1647, 2198
Tth111I GACNNNGTC 1 cut(s) 329
Van91I CCANNNNNTGG 2 cut(s) 642, 2174
Vha464I CTTAAG 1 cut(s) 671
VpaK11BI GGWCC 2 cut(s) 1757, 1832
XapI RAATTY 1 cut(s) 1071
XbaI TCTAGA 1 cut(s) 901
XcmI CCANNNNNNNNNTGG 2 cut(s) 1183, 1442
XmiI GTMKAC 1 cut(s) 2112
ZrmI AGTACT 1 cut(s) 966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.