Rh1DG367200

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0003416
Physical Location & Seq
Reverse (-)
59321743 .. 59324600
2858 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG367200.1

Sequence Viewer

Length: 2331 bp
ATGGATAGCCGGAATCACATTTCGAACACGTTTTGCTGTTGCCGGGTTAGTGACCGGCACCGCATTTCGCATAAGGCGAGAGAAAAATGGAAGAGTGATATACAATCACACAACATTTTCATCTTTCTTTCCCTGTTGTTTTTGTGTGCATTATTTCAGCCGGTTACCAGCGACATATGGGATGGCGTTATTGTCACAGCGGCAGACTACCAATCACTTCAGGCTTTCAAGCACGAGCTAGACGACCCTAAAGGCTTCCTGAAGAGCTGGAACGACAGCGGCTACGGAGCCTGCTCCGGCGGCTGGGCTGGGATCAAGTGTGCTCAGGGGCAGGTCATTGTGATCCAGCTTCCGTGGAAGGGCTTAGGTGGCAGAATCACAGAGAAGATAGGGCAACTTCAAGCGCTGAGAAAGCTTAGCCTCCATGATAATCGCATTGGGGGCTCAATCCCTGCTTCATTGGGCTTGCTTCCAAGCCTCAGAGGTGTGCAGTTGTTTAATAATATGCTTTCTGGTTCAATCCCACCTTCATTGGGTTTTAGTCCTCTGCTTCAAAACCTAGACCTTAGTAACAACTCTCTCACTGGGTCAATCCCAGATAGTCTTGCAAACTCTACCAAGCTTTATAGGGTTGCTTTGAGTTTCAATTCATTATCTGGGTCTTTCCCAAGTAGTCTCACTCACTCACCTTCCCTTAATTTCCTTTCGATCAGTCACAACAATCTGTCTGGAAACATACCAAACAAAATCGGGTCTCTTTCGAATCTTAGGATACTAGATTTGTCTAGCAATGCTATCACTGGAAGCTTGCCTGCTAGTATTGGTAAATTGCAAAACCTTACTGTTCTCAACTTGAGCAGAAACCGAATTCAGGGTCCAATTCCAACCAGTCTCGGAAACATTTCCACTCTTGCACAGCTTGACTTGTCACTAAACAATCTCAGTGATGCAATTCCGGCTTCTTTAGCTTATCTTCCACATCTTGGTTTCCTAAATGTCTCTTACAACAACCTCTCTGGTTCTGTCCCAACTCTTCTCTCACACAAATTCAACGAAAGCTCTTTCGTTGGAAACATTCAGCTATGTGGCTACAGTGCTTTAACTTCATGCCCTTCTGAAGCACCTTCTCAAAGTGGTGTAGCTCCAGCACCTGAGGTAGCAAAACGTCGTCGACGCAGACTTAGTACCAAAGACAGAATTCTCATAGCAGCAGCAGTACTTCTAGTAGTTTTGTTTTTACTTTGCTGCATACTACTTTGCTGTTTGATCCGAAAAAGAGCTGCATCAAAATCAAAGGATGGTGGGGTGGCTGGTGCAGGTGCTGCTAGAACCGAAAAGGGGGTTCCGGTTGGTGGGGGTGAAATCGAATCTGGTGGAGAGGCAGGAGGAAAACTAGTGCATTTTGATGGGCCGATGGCTTTTACAGCAGATGATCTTTTGTGTGCAACAGCAGAGATTATGGGGAAAAGCACTTTCGGGACAGTCTACAAGGCCACACTGGAGGATGGGAGTGAAGTTGCAGTGAAGAGATTGAGAGAGAAGATTACTAAGAATCAGAGGGAGTTCGAAGCAGAAGTGAATATACTTGGGAAAATCAGACATCCAAACCTGTTGGCTTTGAGGGCTTATTACTTGGGACCTAAAGGAGAAAAGCTTCTGGTTTTCGATTACATGCCTAAAGGAAGTCTTGCTGCATTTCTCCATGCTCGTGGACCTGATACACCGATTGATTGGCTAACAAGAATGAGAATCGCAAAGGGCATGGCGCGAGGGCTGTCCTATCTCCACAGCAATGAGAACATCATACATGGGAACCTTACATCCAGCAATGTCCTACTTGATGAGCAAACTGATTCTAAGATTGCAGATTATGGTCTCTCTAAGCTTATGACAGCTGCTGCCAATTCGAATGTGATTGCAACAGCTGGGGCACTAGGGTACCGAGCACCCGAGCTCTCAAAGCTCAAGAAGGCCAACACGAAAACTGATGTGTACAGCCTTGGTGTGATCATATTGGAACTCCTAACAGGAAAGTCTCCCGGCGAGCCAATGAACGGCTTGGATTTGCCTCAGTGGGTTGCCTCCATTGTCAAAGAGGAGTGGACGAACGAAGTTTTTGACCTGGAATTGATGAGGGACGCGTCTGTCATCGGCGATGAGTTGCTAAACACATTGAAACTGGCTTTGCACTGTGTTGATCCTTCCCCATCAGCAAGACCGGAAGTTCTGCAGGTTCTGCAGCAACTCGAAGAGATTAGACCCGAAACAGCTGCCAGTTCAGCCGATGATGGAGGTGCAGAACCCTCAATCCCTTCAACAACAAGCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0009505 GO:0009506 GO:0016020 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

776

Amino Acids

83.28

Weight (kDa)

8.51

Isoelectric Point (pI)

40.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 68 - 107 4e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 231 - 338 8.6e-11 Leucine-rich repeat region
LRR_8 PF13855 252 - 290 1.6e-06 Leucine rich repeat
LRR_4 PF12799 255 - 290 2.7e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 279 - 338 2.1e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 484 - 749 5.1e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 484 - 747 5.8e-39 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1307
AasI GACNNNNNNGTC 1 cut(s) 2144
Acc36I ACCTGC 3 cut(s) 322, 1307, 2221
Acc65I GGTACC 1 cut(s) 1938
AccB1I GGYRCC 2 cut(s) 57, 1938
AccB7I CCANNNNNTGG 1 cut(s) 983
AccI GTMKAC 2 cut(s) 1171, 1485
AccII CGCG 2 cut(s) 1768, 2141
AciI CCGC 4 cut(s) 61, 200, 279, 300
AclWI GGATC 4 cut(s) 320, 337, 1261, 2192
AcsI RAATTY 3 cut(s) 867, 1046, 1197
AcuI CTGAAG 3 cut(s) 203, 281, 1137
AfaI GTAC 4 cut(s) 1186, 1218, 1940, 1994
AfeI AGCGCT 1 cut(s) 405
AfiI CCNNNNNNNGG 8 cut(s) 303, 359, 533, 871, 983, 1338, 1352, 2054
AflIII ACRYGT 2 cut(s) 27, 2139
AgsI TTSAA 8 cut(s) 229, 401, 519, 554, 646, 1051, 2176, 2316
AhlI ACTAGT 1 cut(s) 1393
AjnI CCWGG 1 cut(s) 2121
AloI GAACNNNNNNTCC 4 cut(s) 1805, 1837, 2292, 2324
Alw21I GWGCWC 3 cut(s) 325, 1948, 1956
Alw26I GTCTC 6 cut(s) 680, 759, 896, 1003, 1880, 2040
AlwI GGATC 4 cut(s) 320, 337, 1261, 2192
AlwNI CAGNNNCTG 4 cut(s) 1151, 1322, 1898, 2236
Ama87I CYCGRG 1 cut(s) 1949
Aor51HI AGCGCT 1 cut(s) 405
AoxI GGCC 3 cut(s) 1409, 1491, 1971
ApoI RAATTY 3 cut(s) 867, 1046, 1197
ArsI GACNNNNNNTTYG 2 cut(s) 859, 891
Asp700I GAANNNNTTC 2 cut(s) 901, 1653
Asp718I GGTACC 1 cut(s) 1938
AspLEI GCGC 2 cut(s) 406, 1768
AspS9I GGNCC 4 cut(s) 875, 1409, 1637, 1712
AsuC2I CCSGG 2 cut(s) 44, 2040
AsuHPI GGTGA 2 cut(s) 678, 1370
AsuII TTCGAA 4 cut(s) 23, 761, 1566, 1907
AvaI CYCGRG 1 cut(s) 1949
AvaII GGWCC 3 cut(s) 875, 1637, 1712
AxyI CCTNAGG 1 cut(s) 1152
BaeGI GKGCMC 1 cut(s) 1933
BaeI ACNNNNGTAYC 2 cut(s) 1922, 1955
BanI GGYRCC 2 cut(s) 57, 1938
BanII GRGCYC 2 cut(s) 446, 1956
BarI GAAGNNNNNNTAC 2 cut(s) 1566, 1598
BauI CACGAG 2 cut(s) 233, 1707
Bbv12I GWGCWC 3 cut(s) 325, 1948, 1956
BccI CCATC 7 cut(s) 176, 1292, 1400, 1408, 1499, 2215, 2282
BceAI ACGGC 1 cut(s) 2071
BcgI CGANNNNNNTGC 2 cut(s) 2252, 2286
BciT130I CCWGG 1 cut(s) 2123
BciVI GTATCC 1 cut(s) 765
BclI TGATCA 1 cut(s) 2007
BcnI CCSGG 2 cut(s) 44, 2040
BcoDI GTCTC 6 cut(s) 680, 759, 896, 1003, 1880, 2040
BcuI ACTAGT 1 cut(s) 1393
BfaI CTAG 9 cut(s) 239, 560, 776, 786, 816, 1223, 1326, 1394, 1934
BfmI CTRYAG 3 cut(s) 1090, 2228, 2237
BfoI RGCGCY 1 cut(s) 407
BfuAI ACCTGC 3 cut(s) 322, 1307, 2221
BfuI GTATCC 1 cut(s) 765
BlpI GCTNAGC 1 cut(s) 416
BmcAI AGTACT 1 cut(s) 1218
Bme1390I CCNGG 3 cut(s) 44, 2040, 2123
Bme18I GGWCC 3 cut(s) 875, 1637, 1712
BmeT110I CYCGRG 1 cut(s) 1949
BmgT120I GGNCC 4 cut(s) 875, 1409, 1637, 1712
BmiI GGNNCC 7 cut(s) 59, 289, 876, 1344, 1638, 1814, 1940
BmrFI CCNGG 3 cut(s) 44, 2040, 2123
BmrI ACTGGG 1 cut(s) 594
BmsI GCATC 2 cut(s) 937, 1292
BmuI ACTGGG 1 cut(s) 594
BpmI CTGGAG 2 cut(s) 1128, 1520
Bpu10I CCTNAGC 2 cut(s) 324, 364
Bpu1102I GCTNAGC 1 cut(s) 416
Bpu14I TTCGAA 4 cut(s) 23, 761, 1566, 1907
BpuEI CTTGAG 2 cut(s) 874, 1949
BpuMI CCSGG 2 cut(s) 44, 2040
BsaI GGTCTC 2 cut(s) 759, 1880
BsaJI CCNNGG 2 cut(s) 353, 1999
BsaWI WCCGGW 2 cut(s) 1345, 2218
Bsc4I CCNNNNNNNGG 8 cut(s) 303, 359, 533, 871, 983, 1338, 1352, 2054
Bse118I RCCGGY 2 cut(s) 54, 160
Bse1I ACTGG 6 cut(s) 589, 805, 888, 1503, 2184, 2274
Bse21I CCTNAGG 1 cut(s) 1152
Bse3DI GCAATG 3 cut(s) 796, 1798, 1834
BseBI CCWGG 1 cut(s) 2123
BseDI CCNNGG 2 cut(s) 353, 1999
BseGI GGATG 5 cut(s) 187, 1303, 1510, 1600, 1820
BseLI CCNNNNNNNGG 8 cut(s) 303, 359, 533, 871, 983, 1338, 1352, 2054
BseMI GCAATG 3 cut(s) 796, 1798, 1834
BseMII CTCAG 6 cut(s) 338, 398, 493, 955, 1143, 2084
BseNI ACTGG 6 cut(s) 589, 805, 888, 1503, 2184, 2274
BseRI GAGGAG 1 cut(s) 2111
BseSI GKGCMC 1 cut(s) 1933
BseYI CCCAGC 3 cut(s) 303, 308, 1925
BsgI GTGCAG 3 cut(s) 509, 1335, 2316
Bsh1236I CGCG 2 cut(s) 1768, 2141
BshFI GGCC 3 cut(s) 1411, 1493, 1973
BshNI GGYRCC 2 cut(s) 57, 1938
BsiHKAI GWGCWC 3 cut(s) 325, 1948, 1956
BsiHKCI CYCGRG 1 cut(s) 1949
BsiSI CCGG 9 cut(s) 10, 43, 55, 161, 297, 956, 1346, 2040, 2219
BslFI GGGAC 4 cut(s) 1010, 1492, 1650, 2150
BslI CCNNNNNNNGG 8 cut(s) 303, 359, 533, 871, 983, 1338, 1352, 2054
BsmAI GTCTC 6 cut(s) 680, 759, 896, 1003, 1880, 2040
BsmFI GGGAC 4 cut(s) 1010, 1492, 1650, 2150
BsnI GGCC 3 cut(s) 1411, 1493, 1973
Bso31I GGTCTC 2 cut(s) 759, 1880
BsoBI CYCGRG 1 cut(s) 1949
Bsp119I TTCGAA 4 cut(s) 23, 761, 1566, 1907
Bsp1286I GDGCHC 5 cut(s) 325, 446, 1933, 1948, 1956
Bsp1407I TGTACA 1 cut(s) 1992
Bsp143I GATC 7 cut(s) 312, 342, 708, 1266, 1432, 2007, 2197
Bsp1720I GCTNAGC 1 cut(s) 416
BspACI CCGC 4 cut(s) 61, 200, 279, 300
BspANI GGCC 3 cut(s) 1411, 1493, 1973
BspCNI CTCAG 6 cut(s) 337, 399, 492, 954, 1144, 2083
BspFNI CGCG 2 cut(s) 1768, 2141
BspLI GGNNCC 7 cut(s) 59, 289, 876, 1344, 1638, 1814, 1940
BspMAI CTGCAG 2 cut(s) 2232, 2241
BspMI ACCTGC 3 cut(s) 322, 1307, 2221
BspPI GGATC 4 cut(s) 320, 337, 1261, 2192
BspQI GCTCTTC 1 cut(s) 257
BspT104I TTCGAA 4 cut(s) 23, 761, 1566, 1907
BspT107I GGYRCC 2 cut(s) 57, 1938
BspTNI GGTCTC 2 cut(s) 759, 1880
BsrDI GCAATG 3 cut(s) 796, 1798, 1834
BsrFI RCCGGY 2 cut(s) 54, 160
BsrGI TGTACA 1 cut(s) 1992
BsrI ACTGG 6 cut(s) 589, 805, 888, 1503, 2184, 2274
BssAI RCCGGY 2 cut(s) 54, 160
BssECI CCNNGG 2 cut(s) 353, 1999
BssMI GATC 7 cut(s) 312, 342, 708, 1266, 1432, 2007, 2197
BssSI CACGAG 2 cut(s) 233, 1707
BssT1I CCWWGG 1 cut(s) 1999
Bst2BI CACGAG 2 cut(s) 233, 1707
Bst2UI CCWGG 1 cut(s) 2123
Bst4CI ACNGT 4 cut(s) 844, 1094, 1483, 2192
Bst6I CTCTTC 5 cut(s) 86, 257, 1038, 1520, 2244
BstAPI GCANNNNNTGC 2 cut(s) 1322, 2236
BstAUI TGTACA 1 cut(s) 1992
BstBI TTCGAA 4 cut(s) 23, 761, 1566, 1907
BstC8I GCNNGC 5 cut(s) 292, 467, 809, 813, 2045
BstDSI CCRYGG 1 cut(s) 353
BstEII GGTNACC 1 cut(s) 163
BstF5I GGATG 5 cut(s) 187, 1303, 1510, 1600, 1820
BstFNI CGCG 2 cut(s) 1768, 2141
BstH2I RGCGCY 1 cut(s) 407
BstHHI GCGC 2 cut(s) 406, 1768
BstKTI GATC 7 cut(s) 315, 345, 711, 1269, 1435, 2010, 2200
BstMAI GTCTC 6 cut(s) 680, 759, 896, 1003, 1880, 2040
BstMBI GATC 7 cut(s) 312, 342, 708, 1266, 1432, 2007, 2197
BstNI CCWGG 1 cut(s) 2123
BstNSI RCATGY 1 cut(s) 1675
BstPI GGTNACC 1 cut(s) 163
BstSCI CCNGG 3 cut(s) 42, 2038, 2121
BstSFI CTRYAG 3 cut(s) 1090, 2228, 2237
BstSLI GKGCMC 1 cut(s) 1933
BstUI CGCG 2 cut(s) 1768, 2141
BstXI CCANNNNNNTGG 1 cut(s) 1709
Bsu36I CCTNAGG 1 cut(s) 1152
BsuI GTATCC 1 cut(s) 765
BsuRI GGCC 3 cut(s) 1411, 1493, 1973
BtgI CCRYGG 1 cut(s) 353
BtgZI GCGATG 1 cut(s) 2169
BtsCI GGATG 5 cut(s) 187, 1303, 1510, 1600, 1820
BtsI GCAGTG 1 cut(s) 1527
BtsIMutI CAGTG 8 cut(s) 582, 798, 949, 1099, 1496, 1527, 2078, 2188
BveI ACCTGC 3 cut(s) 322, 1307, 2221
Cac8I GCNNGC 5 cut(s) 292, 467, 809, 813, 2045
CaiI CAGNNNCTG 4 cut(s) 1151, 1322, 1898, 2236
CfoI GCGC 2 cut(s) 406, 1768
Cfr10I RCCGGY 2 cut(s) 54, 160
Cfr13I GGNCC 4 cut(s) 875, 1409, 1637, 1712
CseI GACGC 3 cut(s) 1182, 2130, 2147
Csp6I GTAC 4 cut(s) 1185, 1217, 1939, 1993
CspCI CAANNNNNGTGG 2 cut(s) 513, 548
CviAII CATG 6 cut(s) 425, 1107, 1672, 1703, 1762, 1808
CviQI GTAC 4 cut(s) 1185, 1217, 1939, 1993
DpnI GATC 7 cut(s) 314, 344, 710, 1268, 1434, 2009, 2199
DpnII GATC 7 cut(s) 312, 342, 708, 1266, 1432, 2007, 2197
DrdI GACNNNNNNGTC 1 cut(s) 2144
DseDI GACNNNNNNGTC 1 cut(s) 2144
Eam1104I CTCTTC 5 cut(s) 86, 257, 1038, 1520, 2244
EarI CTCTTC 5 cut(s) 86, 257, 1038, 1520, 2244
Ecl136II GAGCTC 1 cut(s) 1954
Eco130I CCWWGG 1 cut(s) 1999
Eco24I GRGCYC 2 cut(s) 446, 1956
Eco31I GGTCTC 2 cut(s) 759, 1880
Eco47I GGWCC 3 cut(s) 875, 1637, 1712
Eco47III AGCGCT 1 cut(s) 405
Eco53kI GAGCTC 1 cut(s) 1954
Eco57I CTGAAG 3 cut(s) 203, 281, 1137
Eco81I CCTNAGG 1 cut(s) 1152
Eco88I CYCGRG 1 cut(s) 1949
Eco91I GGTNACC 1 cut(s) 163
EcoICRI GAGCTC 1 cut(s) 1954
EcoO109I RGGNCCY 1 cut(s) 1637
EcoO65I GGTNACC 1 cut(s) 163
EcoRI GAATTC 2 cut(s) 867, 1197
EcoRII CCWGG 1 cut(s) 2121
EcoT14I CCWWGG 1 cut(s) 1999
EcoT38I GRGCYC 2 cut(s) 446, 1956
ErhI CCWWGG 1 cut(s) 1999
FaeI CATG 6 cut(s) 428, 1110, 1675, 1706, 1765, 1811
FalI AAGNNNNNCTT 2 cut(s) 1671, 1703
FaqI GGGAC 4 cut(s) 1010, 1492, 1650, 2150
FatI CATG 6 cut(s) 424, 1106, 1671, 1702, 1761, 1807
FauNDI CATATG 1 cut(s) 176
FbaI TGATCA 1 cut(s) 2007
FblI GTMKAC 2 cut(s) 1171, 1485
FokI GGATG 5 cut(s) 194, 1310, 1517, 1587, 1807
FriOI GRGCYC 2 cut(s) 446, 1956
FspBI CTAG 9 cut(s) 239, 560, 776, 786, 816, 1223, 1326, 1394, 1934
GlaI GCGC 2 cut(s) 405, 1767
GsaI CCCAGC 3 cut(s) 307, 312, 1929
GsuI CTGGAG 2 cut(s) 1128, 1520
HaeII RGCGCY 1 cut(s) 407
HaeIII GGCC 3 cut(s) 1411, 1493, 1973
HapII CCGG 9 cut(s) 10, 43, 55, 161, 297, 956, 1346, 2040, 2219
HgaI GACGC 3 cut(s) 1182, 2130, 2147
HhaI GCGC 2 cut(s) 406, 1768
Hin1II CATG 6 cut(s) 428, 1110, 1675, 1706, 1765, 1811
Hin6I GCGC 2 cut(s) 404, 1766
HinP1I GCGC 2 cut(s) 404, 1766
HincII GTYRAC 1 cut(s) 1172
HindII GTYRAC 1 cut(s) 1172
HindIII AAGCTT 5 cut(s) 413, 620, 805, 1652, 1883
HinfI GANTC 7 cut(s) 13, 375, 763, 1367, 1552, 1749, 1853
HpaII CCGG 9 cut(s) 10, 43, 55, 161, 297, 956, 1346, 2040, 2219
HphI GGTGA 2 cut(s) 678, 1370
Hpy166II GTNNAC 5 cut(s) 1172, 1486, 1712, 1993, 2103
Hpy188I TCNGA 6 cut(s) 482, 896, 1117, 1271, 1557, 1598
Hpy188III TCNNGA 4 cut(s) 259, 729, 1477, 1966
Hpy8I GTNNAC 5 cut(s) 1172, 1486, 1712, 1993, 2103
Hpy99I CGWCG 3 cut(s) 1170, 1173, 1176
HpyAV CCTTC 8 cut(s) 352, 537, 699, 1122, 1134, 1963, 2211, 2322
HpyCH4III ACNGT 4 cut(s) 844, 1094, 1483, 2192
HpyCH4IV ACGT 2 cut(s) 29, 1165
HpySE526I ACGT 2 cut(s) 29, 1165
Hsp92II CATG 6 cut(s) 428, 1110, 1675, 1706, 1765, 1811
HspAI GCGC 2 cut(s) 404, 1766
KpnI GGTACC 1 cut(s) 1942
Ksp22I TGATCA 1 cut(s) 2007
Kzo9I GATC 7 cut(s) 312, 342, 708, 1266, 1432, 2007, 2197
LguI GCTCTTC 1 cut(s) 257
LmnI GCTCC 3 cut(s) 287, 299, 1147
LweI GCATC 2 cut(s) 937, 1292
MaeI CTAG 9 cut(s) 239, 560, 776, 786, 816, 1223, 1326, 1394, 1934
MaeII ACGT 2 cut(s) 29, 1165
MaeIII GTNAC 6 cut(s) 50, 163, 193, 569, 713, 927
MalI GATC 7 cut(s) 314, 344, 710, 1268, 1434, 2009, 2199
MboI GATC 7 cut(s) 312, 342, 708, 1266, 1432, 2007, 2197
MboII GAAGA 8 cut(s) 103, 274, 397, 965, 1025, 1537, 1552, 2261
MhlI GDGCHC 5 cut(s) 325, 446, 1933, 1948, 1956
MluI ACGCGT 1 cut(s) 2139
MmeI TCCRAC 2 cut(s) 908, 1048
MroXI GAANNNNTTC 2 cut(s) 901, 1653
MseI TTAA 3 cut(s) 498, 696, 1100
MslI CAYNNNNRTG 3 cut(s) 1404, 1707, 1791
MspA1I CMGCKG 5 cut(s) 200, 279, 1895, 1925, 2270
MspI CCGG 9 cut(s) 10, 43, 55, 161, 297, 956, 1346, 2040, 2219
MspR9I CCNGG 3 cut(s) 44, 2040, 2123
MvaI CCWGG 1 cut(s) 2123
MvnI CGCG 2 cut(s) 1768, 2141
NciI CCSGG 2 cut(s) 44, 2040
NdeI CATATG 1 cut(s) 176
NdeII GATC 7 cut(s) 312, 342, 708, 1266, 1432, 2007, 2197
NlaIII CATG 6 cut(s) 428, 1110, 1675, 1706, 1765, 1811
NlaIV GGNNCC 7 cut(s) 59, 289, 876, 1344, 1638, 1814, 1940
NmuCI GTSAC 4 cut(s) 50, 193, 713, 927
NspI RCATGY 1 cut(s) 1675
NspV TTCGAA 4 cut(s) 23, 761, 1566, 1907
PaqCI CACCTGC 1 cut(s) 1307
PciSI GCTCTTC 1 cut(s) 257
PcsI WCGNNNNNNNCGW 2 cut(s) 74, 240
PdmI GAANNNNTTC 2 cut(s) 901, 1653
PfeI GAWTC 7 cut(s) 13, 375, 763, 1367, 1552, 1749, 1853
PflMI CCANNNNNTGG 1 cut(s) 983
PpuMI RGGWCCY 1 cut(s) 1637
Psp124BI GAGCTC 1 cut(s) 1956
Psp5II RGGWCCY 1 cut(s) 1637
Psp6I CCWGG 1 cut(s) 2121
PspEI GGTNACC 1 cut(s) 163
PspFI CCCAGC 3 cut(s) 303, 308, 1925
PspGI CCWGG 1 cut(s) 2121
PspN4I GGNNCC 7 cut(s) 59, 289, 876, 1344, 1638, 1814, 1940
PspPI GGNCC 4 cut(s) 875, 1409, 1637, 1712
PspPPI RGGWCCY 1 cut(s) 1637
PstI CTGCAG 2 cut(s) 2232, 2241
PstNI CAGNNNCTG 4 cut(s) 1151, 1322, 1898, 2236
PvuII CAGCTG 3 cut(s) 1895, 1925, 2270
RsaI GTAC 4 cut(s) 1186, 1218, 1940, 1994
RsaNI GTAC 4 cut(s) 1185, 1217, 1939, 1993
RseI CAYNNNNRTG 3 cut(s) 1404, 1707, 1791
SacI GAGCTC 1 cut(s) 1956
SalI GTCGAC 1 cut(s) 1170
SapI GCTCTTC 1 cut(s) 257
SaqAI TTAA 3 cut(s) 498, 696, 1100
Sau3AI GATC 7 cut(s) 312, 342, 708, 1266, 1432, 2007, 2197
Sau96I GGNCC 4 cut(s) 875, 1409, 1637, 1712
ScaI AGTACT 1 cut(s) 1218
ScrFI CCNGG 3 cut(s) 44, 2040, 2123
SduI GDGCHC 5 cut(s) 325, 446, 1933, 1948, 1956
SfaNI GCATC 2 cut(s) 937, 1292
SfcI CTRYAG 3 cut(s) 1090, 2228, 2237
SfuI TTCGAA 4 cut(s) 23, 761, 1566, 1907
SgrDI CGTCGACG 1 cut(s) 1170
SinI GGWCC 3 cut(s) 875, 1637, 1712
SmiMI CAYNNNNRTG 3 cut(s) 1404, 1707, 1791
SmlI CTYRAG 2 cut(s) 853, 1964
SmoI CTYRAG 2 cut(s) 853, 1964
SpeI ACTAGT 1 cut(s) 1393
SsiI CCGC 4 cut(s) 61, 200, 279, 300
SspMI CTAG 9 cut(s) 239, 560, 776, 786, 816, 1223, 1326, 1394, 1934
SstI GAGCTC 1 cut(s) 1956
StyD4I CCNGG 3 cut(s) 42, 2038, 2121
StyI CCWWGG 1 cut(s) 1999
TaaI ACNGT 4 cut(s) 844, 1094, 1483, 2192
TaiI ACGT 2 cut(s) 32, 1168
TaqI TCGA 9 cut(s) 23, 707, 761, 1171, 1365, 1566, 1665, 1907, 2247
TatI WGTACW 2 cut(s) 1216, 1992
TauI GCSGC 3 cut(s) 203, 282, 303
TfiI GAWTC 7 cut(s) 13, 375, 763, 1367, 1552, 1749, 1853
Tru1I TTAA 3 cut(s) 498, 696, 1100
Tru9I TTAA 3 cut(s) 498, 696, 1100
TscAI CASTG 8 cut(s) 589, 805, 949, 1099, 1503, 1527, 2078, 2195
TseFI GTSAC 4 cut(s) 50, 193, 713, 927
Tsp45I GTSAC 4 cut(s) 50, 193, 713, 927
TspDTI ATGAA 6 cut(s) 109, 447, 519, 639, 1095, 2066
TspGWI ACGGA 2 cut(s) 300, 342
TspRI CASTG 8 cut(s) 589, 805, 949, 1099, 1503, 1527, 2078, 2195
Van91I CCANNNNNTGG 1 cut(s) 983
VpaK11BI GGWCC 3 cut(s) 875, 1637, 1712
XapI RAATTY 3 cut(s) 867, 1046, 1197
XceI RCATGY 1 cut(s) 1675
XmiI GTMKAC 2 cut(s) 1171, 1485
XmnI GAANNNNTTC 2 cut(s) 901, 1653
XspI CTAG 9 cut(s) 239, 560, 776, 786, 816, 1223, 1326, 1394, 1934
ZrmI AGTACT 1 cut(s) 1218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.