Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012406.1

Orthogroup ID

OG0003416

Physical Location & Seq

Genomic Coordinates Reverse (-)

41969 .. 44548

Gene Structure 2580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012406.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

atggaaaataagttcatccatgtcttactctttgttcagctactggttctcacttgtagacctgtttcgggaggaggggatggagtagttgtctcccgagccgattacctagcacttcgagcattcaagcaagagcttatcgatttcaaaggcttgttgcgcagctggaatgacagtggctatggagtttgctcaggtgggtgggcaggaatcaagtgtgttaaggggcacgtcattgcaatccagcttccatggaggagacttgggggacgaatctcagagaagattgggcagctccaagggcttcgaaagcttagcctgcatgacaatgtcttaggtggccctgttcctgtggctctgggattcctccccaatctcagaggggtttacctcttcaataaccggctttcgggttctgtccctgcttcaattggtaactgtcctcttcttcaaactcttgatttgagcaacaatgcacttaatggttctattcctagtcttgcaaactccactaggttgcttaggcttaatttgagcttcaattcgctttctggttcaatcccagctagtctcactaggtcaagttccctaatcttccttgctctacaacacaacaacctttctggttctattccaagtacttggggtggaacaaacagaacttaccagcttaagttcttgaccctagacaataatctcatctctggaactatcccaagctctctgggcaagttgggttttcttgaagagatttctctgagcaataaccagattacaggaaccatacccaatgaaataggggagctcacaaggctccaaaagctagacctatccaacaatgccatcaatggaagcattcctgctaccttttccaatctgtcctccattgtgacattgaatctaggaggcaatcgccttgataaccaaatcccagaagtcttggaaagaatgcagaacctctcagtacttaatctgaggagtaataaattcagtggtcatattccagcttctattgggaatatctctgggattaaccaagttgatttatccaaaaacaatttcactggagaaattcctgcttcattttccagcctacccaatctcacttccttcaatgtttcttacaacaatctgtctggcttagtcccatctctcctatccaaaaagttcaattccagctcttttgtggggaatcttcagctatgtgggtatagtgcttcaactagatgttcttctccgccatctcagaatattacacttccaacaaaagagcctttgaagaaaaagcatcaccacagactgagtacaaaggacataattctcatagcagcaggtgtcgtcctagcggttctgcttctactctgctgttctttgcttctatgtttgatcaggaaaaggtctgtattgaaaggaaaaaatagtaaaaccgccaagcaaccggccgctgggagcattgataaggcagttcctgcaggcgctgtggtttcatctggaggcgaagctggtgggaagcttgttcactttgatgggccgtttgtgtttactgctgatgatctattgtgtgccactgccgagataatggggaaaagtacatatgggacagcatacaaggcaacattggaggagggtaatcaagttgcagtgaagaggttgagggaaaagactacaaagggtcacaaggagttcgaaactgaaactgcagcaattgggaagattcggcacccgaatctccttgctcttagggcctattacttgggtcccaagggagagaagctccttgtctttgatttcatgcctaagggtagtcttgcatcattccttcatgctcgcggaccagaaatgatcattgattggccaacaaggatgaacatagccattggagtcacaagaggactatgccacctccactaccaggagaacatcatacatgggaatctcacatccagcaacatactacttgatgagcagactaatgctcacattgcagactatggcctttcgagcctcatgacccccgctgccaacaccaatgtaattgccactgcaggaaccctcggctacaatgcgccagagctctcaaagaccaagaagggtacagaaaaaactgatgtctacagccttggggtgatcatattggagctcctaacaggaaaatcaccaggagagccaatgaatggcatggacttgccgcagtgggtggcgtcgattgttaaggaggagtggactaatgaagtttttgatttggagcttataagggatgttccaatcataggtgatcagctgcttaacacactgaaattggctctgcattgtgtggatccctcaccggccgcaagaccagaggctcagcaagttctgcagcagctagaagagattaagccacctgaggtaaatgttggttctgctgacgaaggaacagaagtaccggcatcagcaactgagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0009505 GO:0009506 GO:0016020 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

814

Amino Acids

87.43

Weight (kDa)

8.93

Isoelectric Point (pI)

36.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003416)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51740
fragaria_vesca	FvH4_6g10640 FvH4_6g10640 FvH4_7g25350
malus_domestica	MD01G1159600.v1.1 MD04G1166300.v1.1 MD04G1166400.v1.1 MD07G1228100.v1.1
prunus_persica	Prupe.2G257600_v2.0.a1 Prupe.6G284600_v2.0.a1
pyrus_communis	pycom04g14780 pycom07g20650 pycom12g16950
rosa_chinensis	RchiOBHm_Chr1g0371261 RchiOBHm_Chr1g0371271 RchiOBHm_Chr3g0461661
rosa_laevigata	RLG00000024909 RLG00000026975
rosa_multiflora	Rmu_sc0001978.1_g000006 Rmu_sc0012406.1_g000007
rosa_roxburghii	Rroxscaffold_4G00285830 Rroxscaffold_6G00418060
rosa_rugosa	Rorug01G0362500 Rorug03G0052700
rosa_samantha	Rh1AG372600 Rh1BG336100 Rh1CG349500 Rh1DG367200 Rh3AG111000 Rh3AG111100 Rh3BG114000 Rh3CG116000 Rh3CG116100 Rh3DG115900
rosa_wichuraiana	Rw1G032770 Rw3G009390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2252
AarI	CACCTGC	1 cut(s)	1322
Acc16I	TGCGCA	1 cut(s)	161
Acc36I	ACCTGC	1 cut(s)	1322
AccB1I	GGYRCC	1 cut(s)	1719
AccB7I	CCANNNNNTGG	1 cut(s)	2174
AccI	GTMKAC	2 cut(s)	58, 2112
AccII	CGCG	1 cut(s)	1830
AciI	CCGC	8 cut(s)	1238, 1346, 1428, 1443, 1830, 2016, 2189, 2331
AclWI	GGATC	2 cut(s)	2312, 2325
AcoI	YGGCCR	3 cut(s)	1440, 1853, 2328
AcsI	RAATTY	2 cut(s)	986, 1071
AcuI	CTGAAG	1 cut(s)	1181
AcyI	GRCGYC	1 cut(s)	2201
AfaI	GTAC	6 cut(s)	640, 966, 1306, 1591, 2095, 2424
AfiI	CCNNNNNNNGG	6 cut(s)	68, 409, 1445, 1912, 2174, 2270
AflII	CTTAAG	1 cut(s)	671
AjiI	CACGTC	1 cut(s)	232
AjnI	CCWGG	2 cut(s)	1911, 2158
AjuI	GAANNNNNNNTTGG	2 cut(s)	1043, 1075
AloI	GAACNNNNNNTCC	1 cut(s)	28
Alw21I	GWGCWC	3 cut(s)	807, 2076, 2142
Alw26I	GTCTC	3 cut(s)	97, 253, 575
AlwI	GGATC	2 cut(s)	2312, 2325
AlwNI	CAGNNNCTG	4 cut(s)	43, 1469, 1478, 2438
Ama87I	CYCGRG	1 cut(s)	96
AoxI	GGCC	7 cut(s)	340, 1440, 1529, 1743, 1853, 1993, 2328
ApeKI	GCWGC	8 cut(s)	162, 292, 1328, 1700, 2018, 2281, 2359, 2362
ApoI	RAATTY	2 cut(s)	986, 1071
AspLEI	GCGC	3 cut(s)	162, 1478, 2068
AspS9I	GGNCC	5 cut(s)	341, 1529, 1743, 1757, 1832
AsuHPI	GGTGA	5 cut(s)	1283, 2137, 2148, 2285, 2316
AsuII	TTCGAA	2 cut(s)	307, 1686
AvaI	CYCGRG	1 cut(s)	96
AvaII	GGWCC	2 cut(s)	1757, 1832
AxyI	CCTNAGG	2 cut(s)	1797, 2385
BaeGI	GKGCMC	1 cut(s)	231
BaeI	ACNNNNGTAYC	2 cut(s)	2406, 2439
BalI	TGGCCA	1 cut(s)	1855
BamHI	GGATCC	1 cut(s)	2317
BanI	GGYRCC	1 cut(s)	1719
BanII	GRGCYC	3 cut(s)	807, 2076, 2142
Bbv12I	GWGCWC	3 cut(s)	807, 2076, 2142
BbvI	GCAGC	8 cut(s)	174, 304, 1340, 1712, 2005, 2268, 2371, 2374
BccI	CCATC	5 cut(s)	74, 851, 1156, 1249, 1520
BceAI	ACGGC	1 cut(s)	1516
BciT130I	CCWGG	2 cut(s)	1913, 2160
BclI	TGATCA	4 cut(s)	1386, 1842, 2127, 2275
BcoDI	GTCTC	3 cut(s)	97, 253, 575
BfmI	CTRYAG	5 cut(s)	1470, 1698, 2043, 2113, 2357
BfoI	RGCGCY	1 cut(s)	1479
BfrI	CTTAAG	1 cut(s)	671
BfuAI	ACCTGC	1 cut(s)	1322
BlpI	GCTNAGC	2 cut(s)	314, 2346
BmcAI	AGTACT	2 cut(s)	640, 966
Bme1390I	CCNGG	2 cut(s)	1913, 2160
Bme18I	GGWCC	2 cut(s)	1757, 1832
BmeT110I	CYCGRG	1 cut(s)	96
BmgBI	CACGTC	1 cut(s)	232
BmgT120I	GGNCC	5 cut(s)	341, 1529, 1743, 1757, 1832
BmiI	GGNNCC	7 cut(s)	781, 815, 1721, 1758, 1759, 2050, 2319
BmrFI	CCNGG	2 cut(s)	1913, 2160
BmsI	GCATC	3 cut(s)	1297, 1820, 2438
BplI	GAGNNNNNCTC	2 cut(s)	1758, 1790
BpmI	CTGGAG	2 cut(s)	1086, 1512
Bpu10I	CCTNAGC	2 cut(s)	193, 521
Bpu1102I	GCTNAGC	2 cut(s)	314, 2346
Bpu14I	TTCGAA	2 cut(s)	307, 1686
Bsa29I	ATCGAT	1 cut(s)	141
BsaHI	GRCGYC	1 cut(s)	2201
BsaJI	CCNNGG	5 cut(s)	251, 298, 1761, 2053, 2119
BsaXI	ACNNNNNCTCC	2 cut(s)	75, 105
Bsc4I	CCNNNNNNNGG	6 cut(s)	68, 409, 1445, 1912, 2174, 2270
Bse118I	RCCGGY	4 cut(s)	402, 1438, 2326, 2425
Bse1I	ACTGG	2 cut(s)	48, 1069
Bse21I	CCTNAGG	2 cut(s)	1797, 2385
Bse3DI	GCAATG	2 cut(s)	234, 1980
BseBI	CCWGG	2 cut(s)	1913, 2160
BseCI	ATCGAT	1 cut(s)	141
BseDI	CCNNGG	5 cut(s)	251, 298, 1761, 2053, 2119
BseGI	GGATG	5 cut(s)	15, 85, 1869, 1940, 2263
BseLI	CCNNNNNNNGG	6 cut(s)	68, 409, 1445, 1912, 2174, 2270
BseMI	GCAATG	2 cut(s)	234, 1980
BseNI	ACTGG	2 cut(s)	48, 1069
BseRI	GAGGAG	5 cut(s)	87, 271, 991, 1637, 2231
BseSI	GKGCMC	1 cut(s)	231
BseX3I	CGGCCG	2 cut(s)	1440, 2328
BseXI	GCAGC	8 cut(s)	174, 304, 1340, 1712, 2005, 2268, 2371, 2374
BseYI	CCCAGC	2 cut(s)	562, 1445
Bsh1236I	CGCG	1 cut(s)	1830
Bsh1285I	CGRYCG	2 cut(s)	1443, 2331
BshFI	GGCC	7 cut(s)	342, 1442, 1531, 1745, 1855, 1995, 2330
BshNI	GGYRCC	1 cut(s)	1719
BshVI	ATCGAT	1 cut(s)	141
BsiEI	CGRYCG	2 cut(s)	1443, 2331
BsiHKAI	GWGCWC	3 cut(s)	807, 2076, 2142
BsiHKCI	CYCGRG	1 cut(s)	96
BsiSI	CCGG	4 cut(s)	403, 1439, 2327, 2426
BslFI	GGGAC	5 cut(s)	282, 404, 1130, 1612, 1743
BslI	CCNNNNNNNGG	6 cut(s)	68, 409, 1445, 1912, 2174, 2270
BsmAI	GTCTC	3 cut(s)	97, 253, 575
BsmFI	GGGAC	5 cut(s)	282, 404, 1130, 1612, 1743
BsmI	GAATGC	3 cut(s)	122, 855, 954
BsnI	GGCC	7 cut(s)	342, 1442, 1531, 1745, 1855, 1995, 2330
BsoBI	CYCGRG	1 cut(s)	96
Bsp119I	TTCGAA	2 cut(s)	307, 1686
Bsp1286I	GDGCHC	4 cut(s)	231, 807, 2076, 2142
Bsp143I	GATC	6 cut(s)	1386, 1552, 1842, 2127, 2275, 2317
Bsp1720I	GCTNAGC	2 cut(s)	314, 2346
Bsp19I	CCATGG	1 cut(s)	251
BspACI	CCGC	8 cut(s)	1238, 1346, 1428, 1443, 1830, 2016, 2189, 2331
BspANI	GGCC	7 cut(s)	342, 1442, 1531, 1745, 1855, 1995, 2330
BspDI	ATCGAT	1 cut(s)	141
BspFNI	CGCG	1 cut(s)	1830
BspHI	TCATGA	1 cut(s)	2007
BspLI	GGNNCC	7 cut(s)	781, 815, 1721, 1758, 1759, 2050, 2319
BspMAI	CTGCAG	4 cut(s)	1474, 1702, 2047, 2361
BspMI	ACCTGC	1 cut(s)	1322
BspPI	GGATC	2 cut(s)	2312, 2325
BspT104I	TTCGAA	2 cut(s)	307, 1686
BspT107I	GGYRCC	1 cut(s)	1719
BspTI	CTTAAG	1 cut(s)	671
BsrDI	GCAATG	2 cut(s)	234, 1980
BsrFI	RCCGGY	4 cut(s)	402, 1438, 2326, 2425
BsrI	ACTGG	2 cut(s)	48, 1069
BssAI	RCCGGY	4 cut(s)	402, 1438, 2326, 2425
BssECI	CCNNGG	5 cut(s)	251, 298, 1761, 2053, 2119
BssMI	GATC	6 cut(s)	1386, 1552, 1842, 2127, 2275, 2317
BssNI	GRCGYC	1 cut(s)	2201
BssT1I	CCWWGG	4 cut(s)	251, 298, 1761, 2119
Bst2UI	CCWGG	2 cut(s)	1913, 2160
Bst4CI	ACNGT	2 cut(s)	176, 440
Bst6I	CTCTTC	5 cut(s)	398, 450, 741, 1640, 2364
BstACI	GRCGYC	1 cut(s)	2201
BstAFI	CTTAAG	1 cut(s)	671
BstAPI	GCANNNNNTGC	2 cut(s)	1469, 2356
BstBI	TTCGAA	2 cut(s)	307, 1686
BstC8I	GCNNGC	3 cut(s)	320, 1474, 1828
BstDSI	CCRYGG	1 cut(s)	251
BstF5I	GGATG	5 cut(s)	15, 85, 1869, 1940, 2263
BstFNI	CGCG	1 cut(s)	1830
BstH2I	RGCGCY	1 cut(s)	1479
BstHHI	GCGC	3 cut(s)	162, 1478, 2068
BstKTI	GATC	6 cut(s)	1389, 1555, 1845, 2130, 2278, 2320
BstMAI	GTCTC	3 cut(s)	97, 253, 575
BstMBI	GATC	6 cut(s)	1386, 1552, 1842, 2127, 2275, 2317
BstMCI	CGRYCG	2 cut(s)	1443, 2331
BstNI	CCWGG	2 cut(s)	1913, 2160
BstSCI	CCNGG	2 cut(s)	1911, 2158
BstSFI	CTRYAG	5 cut(s)	1470, 1698, 2043, 2113, 2357
BstSLI	GKGCMC	1 cut(s)	231
BstUI	CGCG	1 cut(s)	1830
BstV1I	GCAGC	8 cut(s)	174, 304, 1340, 1712, 2005, 2268, 2371, 2374
BstX2I	RGATCY	1 cut(s)	2317
BstXI	CCANNNNNNTGG	1 cut(s)	642
BstYI	RGATCY	1 cut(s)	2317
BstZI	CGGCCG	2 cut(s)	1440, 2328
Bsu15I	ATCGAT	1 cut(s)	141
Bsu36I	CCTNAGG	2 cut(s)	1797, 2385
BsuRI	GGCC	7 cut(s)	342, 1442, 1531, 1745, 1855, 1995, 2330
BsuTUI	ATCGAT	1 cut(s)	141
BtgI	CCRYGG	1 cut(s)	251
BtrI	CACGTC	1 cut(s)	232
BtsCI	GGATG	5 cut(s)	15, 85, 1869, 1940, 2263
BtsI	GCAGTG	4 cut(s)	1566, 1647, 2040, 2198
BtsIMutI	CAGTG	8 cut(s)	181, 997, 1062, 1566, 1647, 2040, 2198, 2291
BveI	ACCTGC	1 cut(s)	1322
Cac8I	GCNNGC	3 cut(s)	320, 1474, 1828
CaiI	CAGNNNCTG	4 cut(s)	43, 1469, 1478, 2438
CciI	TCATGA	1 cut(s)	2007
CfoI	GCGC	3 cut(s)	162, 1478, 2068
Cfr10I	RCCGGY	4 cut(s)	402, 1438, 2326, 2425
Cfr13I	GGNCC	5 cut(s)	341, 1529, 1743, 1757, 1832
ClaI	ATCGAT	1 cut(s)	141
CseI	GACGC	1 cut(s)	2190
Csp6I	GTAC	6 cut(s)	639, 965, 1305, 1590, 2094, 2423
CviAII	CATG	8 cut(s)	20, 252, 323, 1792, 1823, 1928, 2008, 2179
CviQI	GTAC	6 cut(s)	639, 965, 1305, 1590, 2094, 2423
DpnI	GATC	6 cut(s)	1388, 1554, 1844, 2129, 2277, 2319
DpnII	GATC	6 cut(s)	1386, 1552, 1842, 2127, 2275, 2317
EaeI	YGGCCR	3 cut(s)	1440, 1853, 2328
EagI	CGGCCG	2 cut(s)	1440, 2328
Eam1104I	CTCTTC	5 cut(s)	398, 450, 741, 1640, 2364
EarI	CTCTTC	5 cut(s)	398, 450, 741, 1640, 2364
EciI	GGCGGA	1 cut(s)	1227
Ecl136II	GAGCTC	3 cut(s)	805, 2074, 2140
EclXI	CGGCCG	2 cut(s)	1440, 2328
Eco130I	CCWWGG	4 cut(s)	251, 298, 1761, 2119
Eco24I	GRGCYC	3 cut(s)	807, 2076, 2142
Eco47I	GGWCC	2 cut(s)	1757, 1832
Eco52I	CGGCCG	2 cut(s)	1440, 2328
Eco53kI	GAGCTC	3 cut(s)	805, 2074, 2140
Eco57I	CTGAAG	1 cut(s)	1181
Eco81I	CCTNAGG	2 cut(s)	1797, 2385
Eco88I	CYCGRG	1 cut(s)	96
EcoICRI	GAGCTC	3 cut(s)	805, 2074, 2140
EcoO109I	RGGNCCY	2 cut(s)	1743, 1757
EcoRII	CCWGG	2 cut(s)	1911, 2158
EcoT14I	CCWWGG	4 cut(s)	251, 298, 1761, 2119
EcoT38I	GRGCYC	3 cut(s)	807, 2076, 2142
ErhI	CCWWGG	4 cut(s)	251, 298, 1761, 2119
FaeI	CATG	8 cut(s)	23, 255, 326, 1795, 1826, 1931, 2011, 2182
FaqI	GGGAC	5 cut(s)	282, 404, 1130, 1612, 1743
FatI	CATG	8 cut(s)	19, 251, 322, 1791, 1822, 1927, 2007, 2178
FauI	CCCGC	1 cut(s)	2023
FauNDI	CATATG	1 cut(s)	1594
FbaI	TGATCA	4 cut(s)	1386, 1842, 2127, 2275
FblI	GTMKAC	2 cut(s)	58, 2112
FokI	GGATG	5 cut(s)	2, 92, 1876, 1927, 2270
FriOI	GRGCYC	3 cut(s)	807, 2076, 2142
FspI	TGCGCA	1 cut(s)	161
GlaI	GCGC	3 cut(s)	161, 1477, 2067
GsaI	CCCAGC	2 cut(s)	566, 1449
GsuI	CTGGAG	2 cut(s)	1086, 1512
HaeII	RGCGCY	1 cut(s)	1479
HaeIII	GGCC	7 cut(s)	342, 1442, 1531, 1745, 1855, 1995, 2330
HapII	CCGG	4 cut(s)	403, 1439, 2327, 2426
HgaI	GACGC	1 cut(s)	2190
HhaI	GCGC	3 cut(s)	162, 1478, 2068
Hin1I	GRCGYC	1 cut(s)	2201
Hin1II	CATG	8 cut(s)	23, 255, 326, 1795, 1826, 1931, 2011, 2182
Hin6I	GCGC	3 cut(s)	160, 1476, 2066
HinP1I	GCGC	3 cut(s)	160, 1476, 2066
HindIII	AAGCTT	2 cut(s)	311, 1511
HinfI	GANTC	9 cut(s)	210, 273, 363, 898, 1192, 1714, 1726, 1881, 1933
HpaII	CCGG	4 cut(s)	403, 1439, 2327, 2426
HphI	GGTGA	5 cut(s)	1283, 2137, 2148, 2285, 2316
Hpy166II	GTNNAC	6 cut(s)	59, 388, 1519, 1542, 2113, 2223
Hpy188I	TCNGA	5 cut(s)	280, 380, 759, 975, 1248
Hpy188III	TCNNGA	9 cut(s)	69, 96, 458, 679, 705, 743, 1390, 1491, 2008
Hpy8I	GTNNAC	6 cut(s)	59, 388, 1519, 1542, 2113, 2223
Hpy99I	CGWCG	1 cut(s)	2206
HpyAV	CCTTC	4 cut(s)	1120, 1829, 2083, 2405
HpyCH4III	ACNGT	2 cut(s)	176, 440
HpyCH4IV	ACGT	1 cut(s)	231
HpySE526I	ACGT	1 cut(s)	231
Hsp92I	GRCGYC	1 cut(s)	2201
Hsp92II	CATG	8 cut(s)	23, 255, 326, 1795, 1826, 1931, 2011, 2182
HspAI	GCGC	3 cut(s)	160, 1476, 2066
KflI	GGGWCCC	1 cut(s)	1757
Ksp22I	TGATCA	4 cut(s)	1386, 1842, 2127, 2275
Kzo9I	GATC	6 cut(s)	1386, 1552, 1842, 2127, 2275, 2317
LmnI	GCTCC	8 cut(s)	300, 802, 819, 1449, 1779, 2137, 2145, 2245
Lsp1109I	GCAGC	8 cut(s)	174, 304, 1340, 1712, 2005, 2268, 2371, 2374
LweI	GCATC	3 cut(s)	1297, 1820, 2438
MaeII	ACGT	1 cut(s)	231
MaeIII	GTNAC	4 cut(s)	434, 889, 1673, 1882
MalI	GATC	6 cut(s)	1388, 1554, 1844, 2129, 2277, 2319
MboI	GATC	6 cut(s)	1386, 1552, 1842, 2127, 2275, 2317
MfeI	CAATTG	2 cut(s)	429, 1704
MflI	RGATCY	1 cut(s)	2317
MhlI	GDGCHC	4 cut(s)	231, 807, 2076, 2142
MlsI	TGGCCA	1 cut(s)	1855
MluNI	TGGCCA	1 cut(s)	1855
MlyI	GAGTC	1 cut(s)	1890
MmeI	TCCRAC	2 cut(s)	858, 1286
Mox20I	TGGCCA	1 cut(s)	1855
MscI	TGGCCA	1 cut(s)	1855
MseI	TTAA	9 cut(s)	222, 480, 528, 672, 969, 1032, 2211, 2286, 2376
MslI	CAYNNNNRTG	2 cut(s)	327, 1524
Msp20I	TGGCCA	1 cut(s)	1855
MspA1I	CMGCKG	4 cut(s)	165, 1445, 2018, 2281
MspCI	CTTAAG	1 cut(s)	671
MspI	CCGG	4 cut(s)	403, 1439, 2327, 2426
MspR9I	CCNGG	2 cut(s)	1913, 2160
MunI	CAATTG	2 cut(s)	429, 1704
Mva1269I	GAATGC	3 cut(s)	122, 855, 954
MvaI	CCWGG	2 cut(s)	1913, 2160
MvnI	CGCG	1 cut(s)	1830
NcoI	CCATGG	1 cut(s)	251
NdeI	CATATG	1 cut(s)	1594
NdeII	GATC	6 cut(s)	1386, 1552, 1842, 2127, 2275, 2317
NlaIII	CATG	8 cut(s)	23, 255, 326, 1795, 1826, 1931, 2011, 2182
NlaIV	GGNNCC	7 cut(s)	781, 815, 1721, 1758, 1759, 2050, 2319
NmeAIII	GCCGAG	2 cut(s)	1597, 2034
NmuCI	GTSAC	3 cut(s)	889, 1673, 1882
NsbI	TGCGCA	1 cut(s)	161
NspV	TTCGAA	2 cut(s)	307, 1686
PagI	TCATGA	1 cut(s)	2007
PaqCI	CACCTGC	1 cut(s)	1322
PctI	GAATGC	3 cut(s)	122, 855, 954
PfeI	GAWTC	8 cut(s)	210, 273, 363, 898, 1192, 1714, 1726, 1933
PflFI	GACNNNGTC	1 cut(s)	329
PflMI	CCANNNNNTGG	1 cut(s)	2174
PleI	GAGTC	1 cut(s)	1889
PpsI	GAGTC	1 cut(s)	1889
PpuMI	RGGWCCY	1 cut(s)	1757
PsiI	TTATAA	1 cut(s)	2252
Psp124BI	GAGCTC	3 cut(s)	807, 2076, 2142
Psp5II	RGGWCCY	1 cut(s)	1757
Psp6I	CCWGG	2 cut(s)	1911, 2158
PspFI	CCCAGC	2 cut(s)	562, 1445
PspGI	CCWGG	2 cut(s)	1911, 2158
PspN4I	GGNNCC	7 cut(s)	781, 815, 1721, 1758, 1759, 2050, 2319
PspPI	GGNCC	5 cut(s)	341, 1529, 1743, 1757, 1832
PspPPI	RGGWCCY	1 cut(s)	1757
PstI	CTGCAG	4 cut(s)	1474, 1702, 2047, 2361
PstNI	CAGNNNCTG	4 cut(s)	43, 1469, 1478, 2438
PsuI	RGATCY	1 cut(s)	2317
PsyI	GACNNNGTC	1 cut(s)	329
PvuII	CAGCTG	2 cut(s)	165, 2281
RsaI	GTAC	6 cut(s)	640, 966, 1306, 1591, 2095, 2424
RsaNI	GTAC	6 cut(s)	639, 965, 1305, 1590, 2094, 2423
RseI	CAYNNNNRTG	2 cut(s)	327, 1524
SacI	GAGCTC	3 cut(s)	807, 2076, 2142
SaqAI	TTAA	9 cut(s)	222, 480, 528, 672, 969, 1032, 2211, 2286, 2376
Sau3AI	GATC	6 cut(s)	1386, 1552, 1842, 2127, 2275, 2317
Sau96I	GGNCC	5 cut(s)	341, 1529, 1743, 1757, 1832
SbfI	CCTGCAGG	1 cut(s)	1474
ScaI	AGTACT	2 cut(s)	640, 966
SchI	GAGTC	1 cut(s)	1890
ScrFI	CCNGG	2 cut(s)	1913, 2160
SdaI	CCTGCAGG	1 cut(s)	1474
SduI	GDGCHC	4 cut(s)	231, 807, 2076, 2142
SfaNI	GCATC	3 cut(s)	1297, 1820, 2438
SfcI	CTRYAG	5 cut(s)	1470, 1698, 2043, 2113, 2357
SfuI	TTCGAA	2 cut(s)	307, 1686
SinI	GGWCC	2 cut(s)	1757, 1832
SmiMI	CAYNNNNRTG	2 cut(s)	327, 1524
SmlI	CTYRAG	1 cut(s)	671
SmoI	CTYRAG	1 cut(s)	671
Sse8387I	CCTGCAGG	1 cut(s)	1474
SsiI	CCGC	8 cut(s)	1238, 1346, 1428, 1443, 1830, 2016, 2189, 2331
SspI	AATATT	1 cut(s)	1252
SstI	GAGCTC	3 cut(s)	807, 2076, 2142
StyD4I	CCNGG	2 cut(s)	1911, 2158
StyI	CCWWGG	4 cut(s)	251, 298, 1761, 2119
TaaI	ACNGT	2 cut(s)	176, 440
TaiI	ACGT	1 cut(s)	234
TaqI	TCGA	6 cut(s)	118, 141, 307, 1686, 2000, 2204
TatI	WGTACW	4 cut(s)	638, 964, 1304, 1589
TauI	GCSGC	3 cut(s)	1445, 2191, 2333
TfiI	GAWTC	8 cut(s)	210, 273, 363, 898, 1192, 1714, 1726, 1933
Tru1I	TTAA	9 cut(s)	222, 480, 528, 672, 969, 1032, 2211, 2286, 2376
Tru9I	TTAA	9 cut(s)	222, 480, 528, 672, 969, 1032, 2211, 2286, 2376
TscAI	CASTG	8 cut(s)	181, 997, 1069, 1573, 1647, 2047, 2198, 2298
TseFI	GTSAC	3 cut(s)	889, 1673, 1882
TseI	GCWGC	8 cut(s)	162, 292, 1328, 1700, 2018, 2281, 2359, 2362
Tsp45I	GTSAC	3 cut(s)	889, 1673, 1882
TspDTI	ATGAA	9 cut(s)	4, 807, 1071, 1476, 1780, 1811, 1880, 2186, 2244
TspRI	CASTG	8 cut(s)	181, 997, 1069, 1573, 1647, 2047, 2198, 2298
Tth111I	GACNNNGTC	1 cut(s)	329
Van91I	CCANNNNNTGG	1 cut(s)	2174
Vha464I	CTTAAG	1 cut(s)	671
VpaK11BI	GGWCC	2 cut(s)	1757, 1832
XapI	RAATTY	2 cut(s)	986, 1071
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1183
XmiI	GTMKAC	2 cut(s)	58, 2112
ZrmI	AGTACT	2 cut(s)	640, 966

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.