Rw3G009390
NAC Family

Probably inactive leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0003416
Physical Location & Seq
Forward (+)
8989730 .. 8993333
3604 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G009390.1

Sequence Viewer

Length: 2427 bp
ATGGAAAATAAGTTCATCCATGTCTTACTCTTTGTTCAGCTACTGGTTCTCACTTGTAGACCTGTTTCGGGAGGAGGGGATGGAGTAGTTGTCTCCCGAGCCGATTATCTAGCACTTCGAGCATTCAAGCAAGAGCTTATCGATTTCAAAGGCTTGTTGCGCAGCTGGAATGACAGTGGCTATGGAGTTTGCTCAGGTGGGTGGGCAGGAATCAAGTGTGTTAAGGGGCAGGTCATTGTTATCCAGCTTCCATGGAGGAGACTTGGGGGACGAATCTCCGAGAAGATTGGGCAGCTCCAAGGGCTTCGAAAGCTTAGCCTGCATGACAATGTCTTAGGTGGCCCTGTCCCTGTGGCTCTGGGATTCCTCCCCAATCTCAGAGGGGTTTACCTCTTCAATAACCGGCTTTCGGGTTCTGTCCCTGCTTCAATTGGTAACTGTCCTCTTCTTCAAACTCTTGATTTGAGCAACAATGCACTTAATGGTTCTATTCCTAGTCTTGCAAACTCCACTAGGTTGCTTAGGCTTAATTTGAGCTTCAATTCGCTTTCTGGTTCAATCCCAGCTAGTCTCACTAGTACTTGGGGTGGAACAAACAGAACTTACCAGCTTCAGTTCTTGACCCTAGACAATAATCTCATCTCTGGAACTATCCCAAGCTCTCTGAGCAAGTTGGGTTTTCTTGAAGAGATTTCTCTGAGCAATAACCAGATTACAGGAACCATACCCAATGAAATAGGGGAGCTCACAAGGCTCCAAAAGCTAGACCTATCCAACAATGCCATCAATGGAAGCATTCCTACTAGCTTTTCCAATCTGTCTTCCATTGTGACATTGAATCTAGAAGGCAATCGCCTTGATAACCAAATCCCAGAAGTCTTGGAAAGAATGCAGAACCTCTCAGTACTTAAGCTAAGGAGTAATAAATTCACTGGTCATATTCCAGCTTCTATTGGGAATATCTCTGGGATTAACCAAGTTGATTTATCCGAAAACAATTTCACTGGAGAAATTCCTGCTTCATTTTCCAGCCTAGCCAATCTCACTTCCTTCAATGTTTCTTACAACAATCTGTCTGGCTTAGTCCCATCTCTCCTATCCAAAAAGTTCAATTCCAGCTCTTTTGTGGGGAATCTTCAGCTATGTGGGTATAGTGCTTCAACTAGATGTTCTTCTCCGCCATCTCAGAATATTACACTTCCAACAAAAGAGCCTTTGAAGAAAAAGCATCACCACAGACTGAGTACAAAGGACATAATTCTCATAGCAGCAGGTGTCGTCCTAGCGGTTCTGCTTCTACTCTGCTGTTCTTTGCTTCTATGTTTGATCAGGAAAAGGTCTGTATTGAAAGGAAAAAATAGTAAAACCGCCAAGCAACCGGCCGCTGGGAGCATTGATAAGGCAGTTCCTGCAGGCGCTGTGGTTTCATCTGGAGGCGAAGCTGGTGGGAAGCTTGTTCACTTTGATGGGCCGTTTGTGTTTACTGCTGATGATCTATTGTGTGCCACTGCCGAGATAATGGGGAAAAGTACATATGGGACAGCATACAAGGCAACATTGGAGGAGGGTAATCAAGTTGCAGTGAAGAGGTTGAGGGAAAAGACTACAAAGGGTCACAAGGAGTTCGAAACTGAAACTGCAGCAATTGGGAAGATTCGGCACCCGAATCTCCTTGCTCTTAGGGCCTATTACTTGGGTCCCAAGGGAGAGAAGCTCCTTGTCTTTGATTTCATGCCTAAGGGTAGTCTTGCATCATTCCTTCATGCTCGCGGACCAGAAATGATCATTGATTGGCCAACAAGGATGAACATAGCCATTGGAGTCACAAGAGGACTATGCCACCTCCACTACCAGGAGAACATCATACATGGGAATCTCACATCCAGCAACATACTACTTGATGAGCAGACTAATGCTCACATTGCAGACTATGGCCTTTCGAGCCTCATGACCCCCGCTGCCAACACCAATGTAATTGCCACTGCAGGAACCCTCGGCTACAATGCACCAGAGCTCTCAAAGACCAAGAAGAGCACAGAAAAAACTGATGTCTACAGCCTTGGGGTGATCATATTGGAGCTCCTAACAGGAAAATCACCCGGAGAGCCAATGAATGGCATGGACTTGCCGCAGTGGGTGGCGTCGATTGTTAAGGAGGAGTGGACTAATGAAGTTTTTGATTTGGAGCTTATAAGGGATGTTCCAATCATAGGGGATCAGCTGCTTAACACACTGAAATTGGCGCTGCATTGTGTGGATCCCTCACCGGCCGCAAGACCAGAGGCTCAGCAAGTTCTGCAGCAGCTAGAAGAGATTAAGCCACCTGAGGTAAATGTTGGTTCTGCTGACGAAGGAACAGAAGTACCGGCATCAGCAACTGATGGCATTCAAAATAAAAATGGAAGTAATCCATATATACTGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0009505 GO:0009506 GO:0016020 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

808

Amino Acids

86.96

Weight (kDa)

8.72

Isoelectric Point (pI)

34.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 73 1.1e-06 Leucine rich repeat N-terminal domain
LRR_4 PF12799 124 - 169 5.3e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 200 - 358 5.7e-11 Leucine-rich repeat region
LRR_8 PF13855 203 - 262 5.4e-08 Leucine rich repeat
LRR_4 PF12799 228 - 262 4.5e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 249 - 286 6.2e-07 Leucine rich repeat
LRR_8 PF13855 299 - 358 4.1e-06 Leucine rich repeat
Pkinase PF00069 504 - 768 3.3e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 505 - 769 1.1e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2192
AarI CACCTGC 1 cut(s) 1262
Acc16I TGCGCA 1 cut(s) 161
Acc36I ACCTGC 2 cut(s) 220, 1262
AccB1I GGYRCC 1 cut(s) 1659
AccB7I CCANNNNNTGG 1 cut(s) 2114
AccI GTMKAC 2 cut(s) 58, 2052
AccII CGCG 1 cut(s) 1770
AciI CCGC 8 cut(s) 1178, 1286, 1368, 1383, 1770, 1956, 2129, 2271
AclWI GGATC 3 cut(s) 2223, 2252, 2265
AcoI YGGCCR 3 cut(s) 1380, 1793, 2268
AcsI RAATTY 2 cut(s) 926, 1011
AcuI CTGAAG 2 cut(s) 596, 1121
AcyI GRCGYC 1 cut(s) 2141
AfaI GTAC 5 cut(s) 580, 906, 1246, 1531, 2364
AfiI CCNNNNNNNGG 6 cut(s) 68, 409, 1385, 1852, 2114, 2210
AflII CTTAAG 1 cut(s) 908
AhlI ACTAGT 1 cut(s) 575
AjnI CCWGG 1 cut(s) 1851
AloI GAACNNNNNNTCC 1 cut(s) 28
Alw21I GWGCWC 4 cut(s) 747, 2016, 2036, 2082
Alw26I GTCTC 3 cut(s) 97, 253, 575
AlwI GGATC 3 cut(s) 2223, 2252, 2265
AlwNI CAGNNNCTG 4 cut(s) 43, 1409, 1418, 2378
Ama87I CYCGRG 1 cut(s) 96
AoxI GGCC 7 cut(s) 340, 1380, 1469, 1683, 1793, 1933, 2268
ApeKI GCWGC 9 cut(s) 162, 292, 1268, 1640, 1958, 2221, 2245, 2299, 2302
ApoI RAATTY 2 cut(s) 926, 1011
AspLEI GCGC 3 cut(s) 162, 1418, 2245
AspS9I GGNCC 5 cut(s) 341, 1469, 1683, 1697, 1772
AsuC2I CCSGG 1 cut(s) 2100
AsuHPI GGTGA 4 cut(s) 1223, 2077, 2088, 2256
AsuII TTCGAA 2 cut(s) 307, 1626
AvaI CYCGRG 1 cut(s) 96
AvaII GGWCC 2 cut(s) 1697, 1772
AxyI CCTNAGG 2 cut(s) 1737, 2325
BaeI ACNNNNGTAYC 2 cut(s) 2346, 2379
BalI TGGCCA 1 cut(s) 1795
BamHI GGATCC 1 cut(s) 2257
BanI GGYRCC 1 cut(s) 1659
BanII GRGCYC 3 cut(s) 747, 2016, 2082
BarI GAAGNNNNNNTAC 2 cut(s) 784, 816
BbsI GAAGAC 1 cut(s) 813
Bbv12I GWGCWC 4 cut(s) 747, 2016, 2036, 2082
BbvI GCAGC 9 cut(s) 174, 304, 1280, 1652, 1945, 2208, 2232, 2311, 2314
BccI CCATC 6 cut(s) 74, 791, 1096, 1189, 1460, 2375
BceAI ACGGC 1 cut(s) 1456
BciT130I CCWGG 1 cut(s) 1853
BclI TGATCA 3 cut(s) 1326, 1782, 2067
BcnI CCSGG 1 cut(s) 2100
BcoDI GTCTC 3 cut(s) 97, 253, 575
BcuI ACTAGT 1 cut(s) 575
BfmI CTRYAG 5 cut(s) 1410, 1638, 1983, 2053, 2297
BfoI RGCGCY 2 cut(s) 1419, 2246
BfrI CTTAAG 1 cut(s) 908
BfuAI ACCTGC 2 cut(s) 220, 1262
BlpI GCTNAGC 2 cut(s) 314, 2286
BmcAI AGTACT 2 cut(s) 580, 906
Bme1390I CCNGG 2 cut(s) 1853, 2100
Bme18I GGWCC 2 cut(s) 1697, 1772
BmeT110I CYCGRG 1 cut(s) 96
BmgT120I GGNCC 5 cut(s) 341, 1469, 1683, 1697, 1772
BmiI GGNNCC 7 cut(s) 721, 755, 1661, 1698, 1699, 1990, 2259
BmrFI CCNGG 2 cut(s) 1853, 2100
BmsI GCATC 3 cut(s) 1237, 1760, 2378
BpiI GAAGAC 1 cut(s) 813
BplI GAGNNNNNCTC 2 cut(s) 1698, 1730
BpmI CTGGAG 2 cut(s) 1026, 1452
Bpu10I CCTNAGC 3 cut(s) 193, 521, 914
Bpu1102I GCTNAGC 2 cut(s) 314, 2286
Bpu14I TTCGAA 2 cut(s) 307, 1626
BpuMI CCSGG 1 cut(s) 2100
Bsa29I ATCGAT 1 cut(s) 141
BsaHI GRCGYC 1 cut(s) 2141
BsaJI CCNNGG 5 cut(s) 251, 298, 1701, 1993, 2059
BsaXI ACNNNNNCTCC 2 cut(s) 75, 105
Bsc4I CCNNNNNNNGG 6 cut(s) 68, 409, 1385, 1852, 2114, 2210
Bse118I RCCGGY 4 cut(s) 402, 1378, 2266, 2365
Bse1I ACTGG 3 cut(s) 48, 937, 1009
Bse21I CCTNAGG 2 cut(s) 1737, 2325
Bse3DI GCAATG 1 cut(s) 1920
BseBI CCWGG 1 cut(s) 1853
BseCI ATCGAT 1 cut(s) 141
BseDI CCNNGG 5 cut(s) 251, 298, 1701, 1993, 2059
BseGI GGATG 5 cut(s) 15, 85, 1809, 1880, 2203
BseLI CCNNNNNNNGG 6 cut(s) 68, 409, 1385, 1852, 2114, 2210
BseMI GCAATG 1 cut(s) 1920
BseMII CTCAG 9 cut(s) 207, 391, 656, 689, 915, 1199, 1232, 2300, 2316
BseNI ACTGG 3 cut(s) 48, 937, 1009
BseRI GAGGAG 4 cut(s) 87, 271, 1577, 2171
BseX3I CGGCCG 2 cut(s) 1380, 2268
BseXI GCAGC 9 cut(s) 174, 304, 1280, 1652, 1945, 2208, 2232, 2311, 2314
BseYI CCCAGC 2 cut(s) 562, 1385
Bsh1236I CGCG 1 cut(s) 1770
Bsh1285I CGRYCG 2 cut(s) 1383, 2271
BshFI GGCC 7 cut(s) 342, 1382, 1471, 1685, 1795, 1935, 2270
BshNI GGYRCC 1 cut(s) 1659
BshVI ATCGAT 1 cut(s) 141
BsiEI CGRYCG 2 cut(s) 1383, 2271
BsiHKAI GWGCWC 4 cut(s) 747, 2016, 2036, 2082
BsiHKCI CYCGRG 1 cut(s) 96
BsiSI CCGG 5 cut(s) 403, 1379, 2100, 2267, 2366
BslFI GGGAC 6 cut(s) 282, 332, 404, 1070, 1552, 1683
BslI CCNNNNNNNGG 6 cut(s) 68, 409, 1385, 1852, 2114, 2210
BsmAI GTCTC 3 cut(s) 97, 253, 575
BsmFI GGGAC 6 cut(s) 282, 332, 404, 1070, 1552, 1683
BsmI GAATGC 4 cut(s) 122, 795, 894, 2385
BsnI GGCC 7 cut(s) 342, 1382, 1471, 1685, 1795, 1935, 2270
BsoBI CYCGRG 1 cut(s) 96
Bsp119I TTCGAA 2 cut(s) 307, 1626
Bsp1286I GDGCHC 4 cut(s) 747, 2016, 2036, 2082
Bsp143I GATC 6 cut(s) 1326, 1492, 1782, 2067, 2215, 2257
Bsp1720I GCTNAGC 2 cut(s) 314, 2286
Bsp19I CCATGG 1 cut(s) 251
BspACI CCGC 8 cut(s) 1178, 1286, 1368, 1383, 1770, 1956, 2129, 2271
BspANI GGCC 7 cut(s) 342, 1382, 1471, 1685, 1795, 1935, 2270
BspCNI CTCAG 9 cut(s) 206, 390, 657, 690, 914, 1198, 1233, 2299, 2317
BspDI ATCGAT 1 cut(s) 141
BspFNI CGCG 1 cut(s) 1770
BspHI TCATGA 1 cut(s) 1947
BspLI GGNNCC 7 cut(s) 721, 755, 1661, 1698, 1699, 1990, 2259
BspMAI CTGCAG 4 cut(s) 1414, 1642, 1987, 2301
BspMI ACCTGC 2 cut(s) 220, 1262
BspPI GGATC 3 cut(s) 2223, 2252, 2265
BspQI GCTCTTC 1 cut(s) 2024
BspT104I TTCGAA 2 cut(s) 307, 1626
BspT107I GGYRCC 1 cut(s) 1659
BspTI CTTAAG 1 cut(s) 908
BsrDI GCAATG 1 cut(s) 1920
BsrFI RCCGGY 4 cut(s) 402, 1378, 2266, 2365
BsrI ACTGG 3 cut(s) 48, 937, 1009
BssAI RCCGGY 4 cut(s) 402, 1378, 2266, 2365
BssECI CCNNGG 5 cut(s) 251, 298, 1701, 1993, 2059
BssMI GATC 6 cut(s) 1326, 1492, 1782, 2067, 2215, 2257
BssNI GRCGYC 1 cut(s) 2141
BssT1I CCWWGG 4 cut(s) 251, 298, 1701, 2059
Bst2UI CCWGG 1 cut(s) 1853
Bst4CI ACNGT 2 cut(s) 176, 440
Bst6I CTCTTC 6 cut(s) 398, 450, 681, 1580, 2024, 2304
BstACI GRCGYC 1 cut(s) 2141
BstAFI CTTAAG 1 cut(s) 908
BstAPI GCANNNNNTGC 2 cut(s) 1409, 2296
BstBI TTCGAA 2 cut(s) 307, 1626
BstC8I GCNNGC 3 cut(s) 320, 1414, 1768
BstDSI CCRYGG 1 cut(s) 251
BstF5I GGATG 5 cut(s) 15, 85, 1809, 1880, 2203
BstFNI CGCG 1 cut(s) 1770
BstH2I RGCGCY 2 cut(s) 1419, 2246
BstHHI GCGC 3 cut(s) 162, 1418, 2245
BstKTI GATC 6 cut(s) 1329, 1495, 1785, 2070, 2218, 2260
BstMAI GTCTC 3 cut(s) 97, 253, 575
BstMBI GATC 6 cut(s) 1326, 1492, 1782, 2067, 2215, 2257
BstMCI CGRYCG 2 cut(s) 1383, 2271
BstNI CCWGG 1 cut(s) 1853
BstSCI CCNGG 2 cut(s) 1851, 2098
BstSFI CTRYAG 5 cut(s) 1410, 1638, 1983, 2053, 2297
BstUI CGCG 1 cut(s) 1770
BstV1I GCAGC 9 cut(s) 174, 304, 1280, 1652, 1945, 2208, 2232, 2311, 2314
BstV2I GAAGAC 1 cut(s) 813
BstX2I RGATCY 1 cut(s) 2257
BstYI RGATCY 1 cut(s) 2257
BstZI CGGCCG 2 cut(s) 1380, 2268
Bsu15I ATCGAT 1 cut(s) 141
Bsu36I CCTNAGG 2 cut(s) 1737, 2325
BsuRI GGCC 7 cut(s) 342, 1382, 1471, 1685, 1795, 1935, 2270
BsuTUI ATCGAT 1 cut(s) 141
BtgI CCRYGG 1 cut(s) 251
BtsCI GGATG 5 cut(s) 15, 85, 1809, 1880, 2203
BtsI GCAGTG 4 cut(s) 1506, 1587, 1980, 2138
BtsIMutI CAGTG 8 cut(s) 181, 930, 1002, 1506, 1587, 1980, 2138, 2231
BveI ACCTGC 2 cut(s) 220, 1262
Cac8I GCNNGC 3 cut(s) 320, 1414, 1768
CaiI CAGNNNCTG 4 cut(s) 43, 1409, 1418, 2378
CciI TCATGA 1 cut(s) 1947
CfoI GCGC 3 cut(s) 162, 1418, 2245
Cfr10I RCCGGY 4 cut(s) 402, 1378, 2266, 2365
Cfr13I GGNCC 5 cut(s) 341, 1469, 1683, 1697, 1772
ClaI ATCGAT 1 cut(s) 141
CseI GACGC 1 cut(s) 2130
Csp6I GTAC 5 cut(s) 579, 905, 1245, 1530, 2363
CviAII CATG 8 cut(s) 20, 252, 323, 1732, 1763, 1868, 1948, 2119
CviQI GTAC 5 cut(s) 579, 905, 1245, 1530, 2363
DpnI GATC 6 cut(s) 1328, 1494, 1784, 2069, 2217, 2259
DpnII GATC 6 cut(s) 1326, 1492, 1782, 2067, 2215, 2257
EaeI YGGCCR 3 cut(s) 1380, 1793, 2268
EagI CGGCCG 2 cut(s) 1380, 2268
Eam1104I CTCTTC 6 cut(s) 398, 450, 681, 1580, 2024, 2304
EarI CTCTTC 6 cut(s) 398, 450, 681, 1580, 2024, 2304
EciI GGCGGA 1 cut(s) 1167
Ecl136II GAGCTC 3 cut(s) 745, 2014, 2080
EclXI CGGCCG 2 cut(s) 1380, 2268
Eco130I CCWWGG 4 cut(s) 251, 298, 1701, 2059
Eco24I GRGCYC 3 cut(s) 747, 2016, 2082
Eco47I GGWCC 2 cut(s) 1697, 1772
Eco52I CGGCCG 2 cut(s) 1380, 2268
Eco53kI GAGCTC 3 cut(s) 745, 2014, 2080
Eco57I CTGAAG 2 cut(s) 596, 1121
Eco81I CCTNAGG 2 cut(s) 1737, 2325
Eco88I CYCGRG 1 cut(s) 96
EcoICRI GAGCTC 3 cut(s) 745, 2014, 2080
EcoO109I RGGNCCY 2 cut(s) 1683, 1697
EcoRII CCWGG 1 cut(s) 1851
EcoT14I CCWWGG 4 cut(s) 251, 298, 1701, 2059
EcoT38I GRGCYC 3 cut(s) 747, 2016, 2082
ErhI CCWWGG 4 cut(s) 251, 298, 1701, 2059
FaeI CATG 8 cut(s) 23, 255, 326, 1735, 1766, 1871, 1951, 2122
FaqI GGGAC 6 cut(s) 282, 332, 404, 1070, 1552, 1683
FatI CATG 8 cut(s) 19, 251, 322, 1731, 1762, 1867, 1947, 2118
FauI CCCGC 1 cut(s) 1963
FauNDI CATATG 1 cut(s) 1534
FbaI TGATCA 3 cut(s) 1326, 1782, 2067
FblI GTMKAC 2 cut(s) 58, 2052
FokI GGATG 5 cut(s) 2, 92, 1816, 1867, 2210
FriOI GRGCYC 3 cut(s) 747, 2016, 2082
FspI TGCGCA 1 cut(s) 161
GlaI GCGC 3 cut(s) 161, 1417, 2244
GsaI CCCAGC 2 cut(s) 566, 1389
GsuI CTGGAG 2 cut(s) 1026, 1452
HaeII RGCGCY 2 cut(s) 1419, 2246
HaeIII GGCC 7 cut(s) 342, 1382, 1471, 1685, 1795, 1935, 2270
HapII CCGG 5 cut(s) 403, 1379, 2100, 2267, 2366
HgaI GACGC 1 cut(s) 2130
HhaI GCGC 3 cut(s) 162, 1418, 2245
Hin1I GRCGYC 1 cut(s) 2141
Hin1II CATG 8 cut(s) 23, 255, 326, 1735, 1766, 1871, 1951, 2122
Hin6I GCGC 3 cut(s) 160, 1416, 2243
HinP1I GCGC 3 cut(s) 160, 1416, 2243
HindIII AAGCTT 2 cut(s) 311, 1451
HinfI GANTC 9 cut(s) 210, 273, 363, 838, 1132, 1654, 1666, 1821, 1873
HpaII CCGG 5 cut(s) 403, 1379, 2100, 2267, 2366
HphI GGTGA 4 cut(s) 1223, 2077, 2088, 2256
Hpy166II GTNNAC 6 cut(s) 59, 388, 1459, 1482, 2053, 2163
Hpy188I TCNGA 6 cut(s) 280, 380, 666, 699, 991, 1188
Hpy8I GTNNAC 6 cut(s) 59, 388, 1459, 1482, 2053, 2163
Hpy99I CGWCG 1 cut(s) 2146
HpyAV CCTTC 4 cut(s) 839, 1060, 1769, 2345
HpyCH4III ACNGT 2 cut(s) 176, 440
Hsp92I GRCGYC 1 cut(s) 2141
Hsp92II CATG 8 cut(s) 23, 255, 326, 1735, 1766, 1871, 1951, 2122
HspAI GCGC 3 cut(s) 160, 1416, 2243
KflI GGGWCCC 1 cut(s) 1697
Ksp22I TGATCA 3 cut(s) 1326, 1782, 2067
Kzo9I GATC 6 cut(s) 1326, 1492, 1782, 2067, 2215, 2257
LguI GCTCTTC 1 cut(s) 2024
LmnI GCTCC 8 cut(s) 300, 742, 759, 1389, 1719, 2077, 2085, 2185
Lsp1109I GCAGC 9 cut(s) 174, 304, 1280, 1652, 1945, 2208, 2232, 2311, 2314
LweI GCATC 3 cut(s) 1237, 1760, 2378
MaeIII GTNAC 4 cut(s) 434, 829, 1613, 1822
MalI GATC 6 cut(s) 1328, 1494, 1784, 2069, 2217, 2259
MboI GATC 6 cut(s) 1326, 1492, 1782, 2067, 2215, 2257
MfeI CAATTG 2 cut(s) 429, 1644
MflI RGATCY 1 cut(s) 2257
MhlI GDGCHC 4 cut(s) 747, 2016, 2036, 2082
MlsI TGGCCA 1 cut(s) 1795
MluNI TGGCCA 1 cut(s) 1795
MlyI GAGTC 1 cut(s) 1830
MmeI TCCRAC 2 cut(s) 798, 1226
Mox20I TGGCCA 1 cut(s) 1795
MscI TGGCCA 1 cut(s) 1795
MseI TTAA 8 cut(s) 222, 480, 528, 909, 972, 2151, 2226, 2316
MslI CAYNNNNRTG 2 cut(s) 327, 1464
Msp20I TGGCCA 1 cut(s) 1795
MspA1I CMGCKG 4 cut(s) 165, 1385, 1958, 2221
MspCI CTTAAG 1 cut(s) 908
MspI CCGG 5 cut(s) 403, 1379, 2100, 2267, 2366
MspR9I CCNGG 2 cut(s) 1853, 2100
MunI CAATTG 2 cut(s) 429, 1644
Mva1269I GAATGC 4 cut(s) 122, 795, 894, 2385
MvaI CCWGG 1 cut(s) 1853
MvnI CGCG 1 cut(s) 1770
NciI CCSGG 1 cut(s) 2100
NcoI CCATGG 1 cut(s) 251
NdeI CATATG 1 cut(s) 1534
NdeII GATC 6 cut(s) 1326, 1492, 1782, 2067, 2215, 2257
NlaIII CATG 8 cut(s) 23, 255, 326, 1735, 1766, 1871, 1951, 2122
NlaIV GGNNCC 7 cut(s) 721, 755, 1661, 1698, 1699, 1990, 2259
NmeAIII GCCGAG 2 cut(s) 1537, 1974
NmuCI GTSAC 3 cut(s) 829, 1613, 1822
NsbI TGCGCA 1 cut(s) 161
NspV TTCGAA 2 cut(s) 307, 1626
PagI TCATGA 1 cut(s) 1947
PaqCI CACCTGC 1 cut(s) 1262
PciSI GCTCTTC 1 cut(s) 2024
PctI GAATGC 4 cut(s) 122, 795, 894, 2385
PfeI GAWTC 8 cut(s) 210, 273, 363, 838, 1132, 1654, 1666, 1873
PflFI GACNNNGTC 1 cut(s) 329
PflMI CCANNNNNTGG 1 cut(s) 2114
PleI GAGTC 1 cut(s) 1829
PpsI GAGTC 1 cut(s) 1829
PpuMI RGGWCCY 1 cut(s) 1697
PsiI TTATAA 1 cut(s) 2192
Psp124BI GAGCTC 3 cut(s) 747, 2016, 2082
Psp5II RGGWCCY 1 cut(s) 1697
Psp6I CCWGG 1 cut(s) 1851
PspFI CCCAGC 2 cut(s) 562, 1385
PspGI CCWGG 1 cut(s) 1851
PspN4I GGNNCC 7 cut(s) 721, 755, 1661, 1698, 1699, 1990, 2259
PspPI GGNCC 5 cut(s) 341, 1469, 1683, 1697, 1772
PspPPI RGGWCCY 1 cut(s) 1697
PstI CTGCAG 4 cut(s) 1414, 1642, 1987, 2301
PstNI CAGNNNCTG 4 cut(s) 43, 1409, 1418, 2378
PsuI RGATCY 1 cut(s) 2257
PsyI GACNNNGTC 1 cut(s) 329
PvuII CAGCTG 2 cut(s) 165, 2221
RsaI GTAC 5 cut(s) 580, 906, 1246, 1531, 2364
RsaNI GTAC 5 cut(s) 579, 905, 1245, 1530, 2363
RseI CAYNNNNRTG 2 cut(s) 327, 1464
SacI GAGCTC 3 cut(s) 747, 2016, 2082
SapI GCTCTTC 1 cut(s) 2024
SaqAI TTAA 8 cut(s) 222, 480, 528, 909, 972, 2151, 2226, 2316
Sau3AI GATC 6 cut(s) 1326, 1492, 1782, 2067, 2215, 2257
Sau96I GGNCC 5 cut(s) 341, 1469, 1683, 1697, 1772
SbfI CCTGCAGG 1 cut(s) 1414
ScaI AGTACT 2 cut(s) 580, 906
SchI GAGTC 1 cut(s) 1830
ScrFI CCNGG 2 cut(s) 1853, 2100
SdaI CCTGCAGG 1 cut(s) 1414
SduI GDGCHC 4 cut(s) 747, 2016, 2036, 2082
SfaNI GCATC 3 cut(s) 1237, 1760, 2378
SfcI CTRYAG 5 cut(s) 1410, 1638, 1983, 2053, 2297
SfuI TTCGAA 2 cut(s) 307, 1626
SinI GGWCC 2 cut(s) 1697, 1772
SmiMI CAYNNNNRTG 2 cut(s) 327, 1464
SmlI CTYRAG 1 cut(s) 908
SmoI CTYRAG 1 cut(s) 908
SpeI ACTAGT 1 cut(s) 575
Sse8387I CCTGCAGG 1 cut(s) 1414
SsiI CCGC 8 cut(s) 1178, 1286, 1368, 1383, 1770, 1956, 2129, 2271
SspI AATATT 1 cut(s) 1192
SstI GAGCTC 3 cut(s) 747, 2016, 2082
StyD4I CCNGG 2 cut(s) 1851, 2098
StyI CCWWGG 4 cut(s) 251, 298, 1701, 2059
TaaI ACNGT 2 cut(s) 176, 440
TaqI TCGA 6 cut(s) 118, 141, 307, 1626, 1940, 2144
TatI WGTACW 4 cut(s) 578, 904, 1244, 1529
TauI GCSGC 3 cut(s) 1385, 2131, 2273
TfiI GAWTC 8 cut(s) 210, 273, 363, 838, 1132, 1654, 1666, 1873
Tru1I TTAA 8 cut(s) 222, 480, 528, 909, 972, 2151, 2226, 2316
Tru9I TTAA 8 cut(s) 222, 480, 528, 909, 972, 2151, 2226, 2316
TscAI CASTG 8 cut(s) 181, 937, 1009, 1513, 1587, 1987, 2138, 2238
TseFI GTSAC 3 cut(s) 829, 1613, 1822
TseI GCWGC 9 cut(s) 162, 292, 1268, 1640, 1958, 2221, 2245, 2299, 2302
Tsp45I GTSAC 3 cut(s) 829, 1613, 1822
TspDTI ATGAA 9 cut(s) 4, 747, 1011, 1416, 1720, 1751, 1820, 2126, 2184
TspRI CASTG 8 cut(s) 181, 937, 1009, 1513, 1587, 1987, 2138, 2238
Tth111I GACNNNGTC 1 cut(s) 329
Van91I CCANNNNNTGG 1 cut(s) 2114
Vha464I CTTAAG 1 cut(s) 908
VpaK11BI GGWCC 2 cut(s) 1697, 1772
XapI RAATTY 2 cut(s) 926, 1011
XbaI TCTAGA 1 cut(s) 841
XcmI CCANNNNNNNNNTGG 1 cut(s) 1123
XmiI GTMKAC 2 cut(s) 58, 2052
ZrmI AGTACT 2 cut(s) 580, 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.