Rroxscaffold_4G00285830

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0003416
Physical Location & Seq
Forward (+)
6988133 .. 6990700
2568 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00285830.1

Sequence Viewer

Length: 2217 bp
ATGGATAGCCAGAATCACATTTCGAACACGTTTTGCTGTTGCCGGCCGGTTACCAGCGACATATGGGATGGCGTTATTGTCACAGCGGCAGACTACCAATCACTTCAGGCTTTCAAGCACGAGCTAGACGACCCTAAAGGCTTCCTGAAGAGCTGGAATGACAGCGGCTACGGAGCCTGCTCCGGAGGCTGGGCTGGGATCAAGTGTGCTCAGGGGCAGGTCATTGTGATCCAGCTTCCGTGGAAGGGCTTAGGTGGCAGAATCACAGAGAAGATAGGGCAACTTCAAGCGCTGAGAAAGCTTAGCCTCCATGATAATCGCATTGGGGGCTCAATCCCTGCTTCATTGGGCTTGCTTCCCAGCCTCAGAGGTGTGCAGTTGTTTAATAATATGCTTTCTGGTTCAATCCCACCTTCATTGGGTTTTAGTCCTCTGCTTCAAAACCTAGACCTTAGTAACAACTCTCTCACTGGGTCAATCCCAGATAGTCTTGCAAACTCTACCAAGCTTTATAGGGTTGCTTTGAGTTTCAATTCATTATCTGGGTCTTTCCCAATTAGTCTCACTCACTCACCTTCCCTTAATTTCCTTTCGATCAGTCACAACAATCTATCTGGAAACATACCAAACGAAATCGGGTCTCTTTCGAATCTTAGGATACTAGATTTGTCTAGCAATGCTATCACTGGAAGCTTGCCTGCTAGTATTGGTAAATTGCAAAACCTCACTGTTCTCAACTTGAGCAGAAACAGAATTCAGGGTCCAATTCCAACCAGTCTCGGAAACATTTCCACACTTGCACAGCTTGACTTGTCACTAAACAATCTCAGTGATGCAATTCCGGCTTCTTTAGCTGATCTTCCACATCTTGGTTTCCTCAATGTCTCTTACAACAACCTCTCTGGTTCTGTCCCAACTCTTCTCTCACACAAATTCAACGAAAGCTCTTTCGTTGGAAACATTCAGCTATGTGGCTACAGTGCTTTAACTTCATGCCCTTCTGAAGCACCTTCTCAAAGTGGTGTAGCTCCAGCACCTGAGGTAGCAAAACGTCGTCGACGCAGACTTAGTACCAAAGACAGAATTCTCATAGCAGCAGCAGTACTTCTAGTAGTATTGTTTTTACTTTGCTGCATACTACTTTGCTGTTTGATTCGAAAAAGAGCTGCATCAAAATCGAAGGATGGTGGGGTGGCTGGGGCAGGTGCTGCTAGAAGCGAAAAGGGGGTTCCGGTTGGTGGGGGTGAAATCGAATCTGGTGGAGAGGCAGGAGGAAAACTAGTGCATTTTGATGGGCCGATGGCTTTTACAGCAGATGATCTTTTGTGTGCAACAGCAGAGATTATGGGGAAAAGCACTTTCGGGACAGTCTACAAGGCCACACTGGAGGATGGGAGTGAAGTTGCAGTGAAGAGATTGAGAGAGAAGATTACTAAGAATCAGAGGGAGTTCGAAGCAGAAGTGAATATACTTGGGAAGATCAGACACCCAAACCTGTTGGCTTTGAGGGCTTATTACTTGGGACCTAAAGGAGAAAAGCTTCTGGTTTTCGATTACATGCCTAAAGGAAGTCTTGCTGCATTTCTCCATGCTCGTGGACCTGATACACCGATTGATTGGCCAACAAGAATGAGAATCGCAAAGGGCATGGCGCGAGGGCTGTCCTATCTCCACAGCAATGAGAACATCATACATGGGAACCTTACATCCAGCAATGTCCTACTTGATGAGCAAACAGATTCTAAGATTGCAGATTATGGTCTCTCTAAGCTTATGACAGCTGCTGCCAATTCGAATGTGATTGCAACAGCTGGGGCACTAGGGTACCGAGCACCCGAGCTCTCAAAGCTCAAGAAGGCCAACACGAAAACTGATGTGTACAGCCTTGGTGTGATCATATTGGAACTCCTGACAGGAAAGTCTCCTGGCGAGCCAATGAACGGGTTGGATTTGCCTCAGTGGGTTGCCTCCATTGTCAAAGAGGAGTGGACGAACGAAGTTTTTGACCTGGAATTGATGAGGGACGCGTCTGTCATCGGGGATGAGTTGCTAAACACATTGAAACTGGCTTTGCATTGTGTTGATCCTTCCCCATCAGCAAGACCGGAAGTTCTGCAGGTTCTGCAGCAACTCGAAGAGATTAGACCCGAAACAGCTGCCAGTTCAGCCGATGATGGAGGTGGAGAACCATCAATCCCTTCAACAACAAGCGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0009505 GO:0009506 GO:0016020 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

738

Amino Acids

78.62

Weight (kDa)

6.9

Isoelectric Point (pI)

40.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 69 3.8e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 193 - 300 9.8e-12 Leucine-rich repeat region
LRR_8 PF13855 214 - 252 1.5e-06 Leucine rich repeat
LRR_4 PF12799 217 - 252 2.5e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 241 - 300 5.5e-08 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 446 - 711 3.5e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 446 - 709 3.6e-39 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1193
AasI GACNNNNNNGTC 2 cut(s) 1918, 2030
Acc36I ACCTGC 3 cut(s) 208, 1193, 2107
Acc65I GGTACC 1 cut(s) 1824
AccB1I GGYRCC 1 cut(s) 1824
AccB7I CCANNNNNTGG 1 cut(s) 869
AccI GTMKAC 2 cut(s) 1057, 1371
AccII CGCG 2 cut(s) 1654, 2027
AccIII TCCGGA 1 cut(s) 182
AciI CCGC 2 cut(s) 86, 165
AclWI GGATC 3 cut(s) 206, 223, 2078
AcoI YGGCCR 2 cut(s) 44, 1619
AcsI RAATTY 3 cut(s) 753, 932, 1083
AcuI CTGAAG 3 cut(s) 89, 167, 1023
AfaI GTAC 4 cut(s) 1072, 1104, 1826, 1880
AfeI AGCGCT 1 cut(s) 291
AfiI CCNNNNNNNGG 6 cut(s) 189, 245, 419, 869, 1238, 1940
AflIII ACRYGT 2 cut(s) 27, 2025
AgsI TTSAA 8 cut(s) 115, 287, 405, 440, 532, 937, 2062, 2202
AhlI ACTAGT 1 cut(s) 1279
AjnI CCWGG 2 cut(s) 1924, 2007
AloI GAACNNNNNNTCC 4 cut(s) 1691, 1723, 2178, 2210
Alw21I GWGCWC 3 cut(s) 211, 1834, 1842
Alw26I GTCTC 6 cut(s) 566, 645, 782, 889, 1766, 1926
AlwI GGATC 3 cut(s) 206, 223, 2078
AlwNI CAGNNNCTG 4 cut(s) 1037, 1208, 1784, 2122
Ama87I CYCGRG 1 cut(s) 1835
Aor13HI TCCGGA 1 cut(s) 182
Aor51HI AGCGCT 1 cut(s) 291
AoxI GGCC 5 cut(s) 44, 1295, 1377, 1619, 1857
ApoI RAATTY 3 cut(s) 753, 932, 1083
Asp700I GAANNNNTTC 2 cut(s) 787, 1539
Asp718I GGTACC 1 cut(s) 1824
AspLEI GCGC 2 cut(s) 292, 1654
AspS9I GGNCC 4 cut(s) 761, 1295, 1523, 1598
AsuHPI GGTGA 2 cut(s) 564, 1256
AsuII TTCGAA 5 cut(s) 23, 647, 1156, 1452, 1793
AvaI CYCGRG 1 cut(s) 1835
AvaII GGWCC 3 cut(s) 761, 1523, 1598
AxyI CCTNAGG 1 cut(s) 1038
BaeGI GKGCMC 1 cut(s) 1819
BaeI ACNNNNGTAYC 2 cut(s) 1808, 1841
BalI TGGCCA 1 cut(s) 1621
BanI GGYRCC 1 cut(s) 1824
BanII GRGCYC 2 cut(s) 332, 1842
BarI GAAGNNNNNNTAC 2 cut(s) 1452, 1484
BauI CACGAG 2 cut(s) 119, 1593
Bbv12I GWGCWC 3 cut(s) 211, 1834, 1842
BccI CCATC 8 cut(s) 62, 1178, 1286, 1294, 1385, 2101, 2168, 2197
BcgI CGANNNNNNTGC 4 cut(s) 1158, 1192, 2138, 2172
BciT130I CCWGG 2 cut(s) 1926, 2009
BciVI GTATCC 1 cut(s) 651
BclI TGATCA 1 cut(s) 1893
BcoDI GTCTC 6 cut(s) 566, 645, 782, 889, 1766, 1926
BcuI ACTAGT 1 cut(s) 1279
BfaI CTAG 9 cut(s) 125, 446, 662, 672, 702, 1109, 1212, 1280, 1820
BfmI CTRYAG 3 cut(s) 976, 2114, 2123
BfoI RGCGCY 1 cut(s) 293
BfuAI ACCTGC 3 cut(s) 208, 1193, 2107
BfuI GTATCC 1 cut(s) 651
BlpI GCTNAGC 1 cut(s) 302
BmcAI AGTACT 1 cut(s) 1104
Bme1390I CCNGG 2 cut(s) 1926, 2009
Bme18I GGWCC 3 cut(s) 761, 1523, 1598
BmeT110I CYCGRG 1 cut(s) 1835
BmgT120I GGNCC 4 cut(s) 761, 1295, 1523, 1598
BmiI GGNNCC 6 cut(s) 175, 762, 1230, 1524, 1700, 1826
BmrFI CCNGG 2 cut(s) 1926, 2009
BmrI ACTGGG 1 cut(s) 480
BmsI GCATC 2 cut(s) 823, 1178
BmuI ACTGGG 1 cut(s) 480
BpmI CTGGAG 2 cut(s) 1014, 1406
Bpu10I CCTNAGC 2 cut(s) 210, 250
Bpu1102I GCTNAGC 1 cut(s) 302
Bpu14I TTCGAA 5 cut(s) 23, 647, 1156, 1452, 1793
BpuEI CTTGAG 2 cut(s) 760, 1835
BsaI GGTCTC 2 cut(s) 645, 1766
BsaJI CCNNGG 2 cut(s) 239, 1885
BsaWI WCCGGW 3 cut(s) 182, 1231, 2104
Bsc4I CCNNNNNNNGG 6 cut(s) 189, 245, 419, 869, 1238, 1940
Bse118I RCCGGY 2 cut(s) 42, 46
Bse1I ACTGG 6 cut(s) 475, 691, 774, 1389, 2070, 2160
Bse21I CCTNAGG 1 cut(s) 1038
Bse3DI GCAATG 3 cut(s) 682, 1684, 1720
BseAI TCCGGA 1 cut(s) 182
BseBI CCWGG 2 cut(s) 1926, 2009
BseDI CCNNGG 2 cut(s) 239, 1885
BseGI GGATG 5 cut(s) 73, 1189, 1396, 1706, 2047
BseLI CCNNNNNNNGG 6 cut(s) 189, 245, 419, 869, 1238, 1940
BseMI GCAATG 3 cut(s) 682, 1684, 1720
BseMII CTCAG 6 cut(s) 224, 284, 379, 841, 1029, 1970
BseNI ACTGG 6 cut(s) 475, 691, 774, 1389, 2070, 2160
BseRI GAGGAG 1 cut(s) 1997
BseSI GKGCMC 1 cut(s) 1819
BseX3I CGGCCG 1 cut(s) 44
BseYI CCCAGC 5 cut(s) 189, 194, 359, 1196, 1811
BsgI GTGCAG 1 cut(s) 395
Bsh1236I CGCG 2 cut(s) 1654, 2027
Bsh1285I CGRYCG 1 cut(s) 47
BshFI GGCC 5 cut(s) 46, 1297, 1379, 1621, 1859
BshNI GGYRCC 1 cut(s) 1824
BsiEI CGRYCG 1 cut(s) 47
BsiHKAI GWGCWC 3 cut(s) 211, 1834, 1842
BsiHKCI CYCGRG 1 cut(s) 1835
BsiSI CCGG 6 cut(s) 43, 47, 183, 842, 1232, 2105
BslFI GGGAC 4 cut(s) 896, 1378, 1536, 2036
BslI CCNNNNNNNGG 6 cut(s) 189, 245, 419, 869, 1238, 1940
BsmAI GTCTC 6 cut(s) 566, 645, 782, 889, 1766, 1926
BsmFI GGGAC 4 cut(s) 896, 1378, 1536, 2036
BsnI GGCC 5 cut(s) 46, 1297, 1379, 1621, 1859
Bso31I GGTCTC 2 cut(s) 645, 1766
BsoBI CYCGRG 1 cut(s) 1835
Bsp119I TTCGAA 5 cut(s) 23, 647, 1156, 1452, 1793
Bsp1286I GDGCHC 5 cut(s) 211, 332, 1819, 1834, 1842
Bsp13I TCCGGA 1 cut(s) 182
Bsp1407I TGTACA 1 cut(s) 1878
Bsp143I GATC 8 cut(s) 198, 228, 594, 856, 1318, 1479, 1893, 2083
Bsp1720I GCTNAGC 1 cut(s) 302
BspACI CCGC 2 cut(s) 86, 165
BspANI GGCC 5 cut(s) 46, 1297, 1379, 1621, 1859
BspCNI CTCAG 6 cut(s) 223, 285, 378, 840, 1030, 1969
BspEI TCCGGA 1 cut(s) 182
BspFNI CGCG 2 cut(s) 1654, 2027
BspLI GGNNCC 6 cut(s) 175, 762, 1230, 1524, 1700, 1826
BspMAI CTGCAG 2 cut(s) 2118, 2127
BspMI ACCTGC 3 cut(s) 208, 1193, 2107
BspPI GGATC 3 cut(s) 206, 223, 2078
BspQI GCTCTTC 1 cut(s) 143
BspT104I TTCGAA 5 cut(s) 23, 647, 1156, 1452, 1793
BspT107I GGYRCC 1 cut(s) 1824
BspTNI GGTCTC 2 cut(s) 645, 1766
BsrDI GCAATG 3 cut(s) 682, 1684, 1720
BsrFI RCCGGY 2 cut(s) 42, 46
BsrGI TGTACA 1 cut(s) 1878
BsrI ACTGG 6 cut(s) 475, 691, 774, 1389, 2070, 2160
BssAI RCCGGY 2 cut(s) 42, 46
BssECI CCNNGG 2 cut(s) 239, 1885
BssMI GATC 8 cut(s) 198, 228, 594, 856, 1318, 1479, 1893, 2083
BssSI CACGAG 2 cut(s) 119, 1593
BssT1I CCWWGG 1 cut(s) 1885
Bst2BI CACGAG 2 cut(s) 119, 1593
Bst2UI CCWGG 2 cut(s) 1926, 2009
Bst4CI ACNGT 3 cut(s) 730, 980, 1369
Bst6I CTCTTC 4 cut(s) 143, 924, 1406, 2130
BstAPI GCANNNNNTGC 2 cut(s) 1208, 2122
BstAUI TGTACA 1 cut(s) 1878
BstBI TTCGAA 5 cut(s) 23, 647, 1156, 1452, 1793
BstC8I GCNNGC 6 cut(s) 44, 178, 353, 695, 699, 1931
BstDSI CCRYGG 1 cut(s) 239
BstEII GGTNACC 1 cut(s) 49
BstF5I GGATG 5 cut(s) 73, 1189, 1396, 1706, 2047
BstFNI CGCG 2 cut(s) 1654, 2027
BstH2I RGCGCY 1 cut(s) 293
BstHHI GCGC 2 cut(s) 292, 1654
BstKTI GATC 8 cut(s) 201, 231, 597, 859, 1321, 1482, 1896, 2086
BstMAI GTCTC 6 cut(s) 566, 645, 782, 889, 1766, 1926
BstMBI GATC 8 cut(s) 198, 228, 594, 856, 1318, 1479, 1893, 2083
BstMCI CGRYCG 1 cut(s) 47
BstNI CCWGG 2 cut(s) 1926, 2009
BstNSI RCATGY 1 cut(s) 1561
BstPI GGTNACC 1 cut(s) 49
BstSCI CCNGG 2 cut(s) 1924, 2007
BstSFI CTRYAG 3 cut(s) 976, 2114, 2123
BstSLI GKGCMC 1 cut(s) 1819
BstUI CGCG 2 cut(s) 1654, 2027
BstXI CCANNNNNNTGG 1 cut(s) 1595
BstZI CGGCCG 1 cut(s) 44
Bsu36I CCTNAGG 1 cut(s) 1038
BsuI GTATCC 1 cut(s) 651
BsuRI GGCC 5 cut(s) 46, 1297, 1379, 1621, 1859
BtgI CCRYGG 1 cut(s) 239
BtsCI GGATG 5 cut(s) 73, 1189, 1396, 1706, 2047
BtsI GCAGTG 1 cut(s) 1413
BtsIMutI CAGTG 8 cut(s) 468, 684, 726, 835, 985, 1382, 1413, 1964
BveI ACCTGC 3 cut(s) 208, 1193, 2107
Cac8I GCNNGC 6 cut(s) 44, 178, 353, 695, 699, 1931
CaiI CAGNNNCTG 4 cut(s) 1037, 1208, 1784, 2122
CfoI GCGC 2 cut(s) 292, 1654
Cfr10I RCCGGY 2 cut(s) 42, 46
Cfr13I GGNCC 4 cut(s) 761, 1295, 1523, 1598
CseI GACGC 3 cut(s) 1068, 2016, 2033
Csp6I GTAC 4 cut(s) 1071, 1103, 1825, 1879
CspCI CAANNNNNGTGG 2 cut(s) 399, 434
CviAII CATG 6 cut(s) 311, 993, 1558, 1589, 1648, 1694
CviQI GTAC 4 cut(s) 1071, 1103, 1825, 1879
DpnI GATC 8 cut(s) 200, 230, 596, 858, 1320, 1481, 1895, 2085
DpnII GATC 8 cut(s) 198, 228, 594, 856, 1318, 1479, 1893, 2083
DrdI GACNNNNNNGTC 2 cut(s) 1918, 2030
DseDI GACNNNNNNGTC 2 cut(s) 1918, 2030
EaeI YGGCCR 2 cut(s) 44, 1619
EagI CGGCCG 1 cut(s) 44
Eam1104I CTCTTC 4 cut(s) 143, 924, 1406, 2130
EarI CTCTTC 4 cut(s) 143, 924, 1406, 2130
Ecl136II GAGCTC 1 cut(s) 1840
EclXI CGGCCG 1 cut(s) 44
Eco130I CCWWGG 1 cut(s) 1885
Eco24I GRGCYC 2 cut(s) 332, 1842
Eco31I GGTCTC 2 cut(s) 645, 1766
Eco47I GGWCC 3 cut(s) 761, 1523, 1598
Eco47III AGCGCT 1 cut(s) 291
Eco52I CGGCCG 1 cut(s) 44
Eco53kI GAGCTC 1 cut(s) 1840
Eco57I CTGAAG 3 cut(s) 89, 167, 1023
Eco81I CCTNAGG 1 cut(s) 1038
Eco88I CYCGRG 1 cut(s) 1835
Eco91I GGTNACC 1 cut(s) 49
EcoICRI GAGCTC 1 cut(s) 1840
EcoO109I RGGNCCY 1 cut(s) 1523
EcoO65I GGTNACC 1 cut(s) 49
EcoRI GAATTC 2 cut(s) 753, 1083
EcoRII CCWGG 2 cut(s) 1924, 2007
EcoT14I CCWWGG 1 cut(s) 1885
EcoT38I GRGCYC 2 cut(s) 332, 1842
ErhI CCWWGG 1 cut(s) 1885
FaeI CATG 6 cut(s) 314, 996, 1561, 1592, 1651, 1697
FalI AAGNNNNNCTT 2 cut(s) 1557, 1589
FaqI GGGAC 4 cut(s) 896, 1378, 1536, 2036
FatI CATG 6 cut(s) 310, 992, 1557, 1588, 1647, 1693
FauNDI CATATG 1 cut(s) 62
FbaI TGATCA 1 cut(s) 1893
FblI GTMKAC 2 cut(s) 1057, 1371
FokI GGATG 5 cut(s) 80, 1196, 1403, 1693, 2054
FriOI GRGCYC 2 cut(s) 332, 1842
FspBI CTAG 9 cut(s) 125, 446, 662, 672, 702, 1109, 1212, 1280, 1820
GlaI GCGC 2 cut(s) 291, 1653
GsaI CCCAGC 5 cut(s) 193, 198, 363, 1200, 1815
GsuI CTGGAG 2 cut(s) 1014, 1406
HaeII RGCGCY 1 cut(s) 293
HaeIII GGCC 5 cut(s) 46, 1297, 1379, 1621, 1859
HapII CCGG 6 cut(s) 43, 47, 183, 842, 1232, 2105
HgaI GACGC 3 cut(s) 1068, 2016, 2033
HhaI GCGC 2 cut(s) 292, 1654
Hin1II CATG 6 cut(s) 314, 996, 1561, 1592, 1651, 1697
Hin6I GCGC 2 cut(s) 290, 1652
HinP1I GCGC 2 cut(s) 290, 1652
HincII GTYRAC 1 cut(s) 1058
HindII GTYRAC 1 cut(s) 1058
HindIII AAGCTT 5 cut(s) 299, 506, 691, 1538, 1769
HinfI GANTC 8 cut(s) 13, 261, 649, 1153, 1253, 1438, 1635, 1739
HpaII CCGG 6 cut(s) 43, 47, 183, 842, 1232, 2105
HphI GGTGA 2 cut(s) 564, 1256
Hpy166II GTNNAC 5 cut(s) 1058, 1372, 1598, 1879, 1989
Hpy188I TCNGA 5 cut(s) 368, 782, 1003, 1443, 1484
Hpy188III TCNNGA 6 cut(s) 145, 183, 615, 1363, 1852, 1909
Hpy8I GTNNAC 5 cut(s) 1058, 1372, 1598, 1879, 1989
Hpy99I CGWCG 3 cut(s) 1056, 1059, 1062
HpyAV CCTTC 9 cut(s) 238, 423, 585, 1008, 1020, 1174, 1849, 2097, 2208
HpyCH4III ACNGT 3 cut(s) 730, 980, 1369
HpyCH4IV ACGT 2 cut(s) 29, 1051
HpySE526I ACGT 2 cut(s) 29, 1051
Hsp92II CATG 6 cut(s) 314, 996, 1561, 1592, 1651, 1697
HspAI GCGC 2 cut(s) 290, 1652
Kpn2I TCCGGA 1 cut(s) 182
KpnI GGTACC 1 cut(s) 1828
KroI GCCGGC 1 cut(s) 42
KroNI GCCGGC 1 cut(s) 44
Ksp22I TGATCA 1 cut(s) 1893
Kzo9I GATC 8 cut(s) 198, 228, 594, 856, 1318, 1479, 1893, 2083
LguI GCTCTTC 1 cut(s) 143
LmnI GCTCC 3 cut(s) 173, 185, 1033
LweI GCATC 2 cut(s) 823, 1178
MaeI CTAG 9 cut(s) 125, 446, 662, 672, 702, 1109, 1212, 1280, 1820
MaeII ACGT 2 cut(s) 29, 1051
MaeIII GTNAC 5 cut(s) 49, 79, 455, 599, 813
MalI GATC 8 cut(s) 200, 230, 596, 858, 1320, 1481, 1895, 2085
MboI GATC 8 cut(s) 198, 228, 594, 856, 1318, 1479, 1893, 2083
MboII GAAGA 8 cut(s) 160, 283, 851, 911, 1423, 1438, 1489, 2147
MhlI GDGCHC 5 cut(s) 211, 332, 1819, 1834, 1842
MlsI TGGCCA 1 cut(s) 1621
MluI ACGCGT 1 cut(s) 2025
MluNI TGGCCA 1 cut(s) 1621
MmeI TCCRAC 3 cut(s) 794, 934, 1926
Mox20I TGGCCA 1 cut(s) 1621
MroI TCCGGA 1 cut(s) 182
MroNI GCCGGC 1 cut(s) 42
MroXI GAANNNNTTC 2 cut(s) 787, 1539
MscI TGGCCA 1 cut(s) 1621
MseI TTAA 3 cut(s) 384, 582, 986
MslI CAYNNNNRTG 3 cut(s) 1290, 1593, 1677
Msp20I TGGCCA 1 cut(s) 1621
MspA1I CMGCKG 5 cut(s) 86, 165, 1781, 1811, 2156
MspI CCGG 6 cut(s) 43, 47, 183, 842, 1232, 2105
MspR9I CCNGG 2 cut(s) 1926, 2009
MvaI CCWGG 2 cut(s) 1926, 2009
MvnI CGCG 2 cut(s) 1654, 2027
NaeI GCCGGC 1 cut(s) 44
NdeI CATATG 1 cut(s) 62
NdeII GATC 8 cut(s) 198, 228, 594, 856, 1318, 1479, 1893, 2083
NgoMIV GCCGGC 1 cut(s) 42
NlaIII CATG 6 cut(s) 314, 996, 1561, 1592, 1651, 1697
NlaIV GGNNCC 6 cut(s) 175, 762, 1230, 1524, 1700, 1826
NmuCI GTSAC 3 cut(s) 79, 599, 813
NspI RCATGY 1 cut(s) 1561
NspV TTCGAA 5 cut(s) 23, 647, 1156, 1452, 1793
PaqCI CACCTGC 1 cut(s) 1193
PciSI GCTCTTC 1 cut(s) 143
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PdiI GCCGGC 1 cut(s) 44
PdmI GAANNNNTTC 2 cut(s) 787, 1539
PfeI GAWTC 8 cut(s) 13, 261, 649, 1153, 1253, 1438, 1635, 1739
PflMI CCANNNNNTGG 1 cut(s) 869
PpuMI RGGWCCY 1 cut(s) 1523
Psp124BI GAGCTC 1 cut(s) 1842
Psp5II RGGWCCY 1 cut(s) 1523
Psp6I CCWGG 2 cut(s) 1924, 2007
PspEI GGTNACC 1 cut(s) 49
PspFI CCCAGC 5 cut(s) 189, 194, 359, 1196, 1811
PspGI CCWGG 2 cut(s) 1924, 2007
PspN4I GGNNCC 6 cut(s) 175, 762, 1230, 1524, 1700, 1826
PspPI GGNCC 4 cut(s) 761, 1295, 1523, 1598
PspPPI RGGWCCY 1 cut(s) 1523
PstI CTGCAG 2 cut(s) 2118, 2127
PstNI CAGNNNCTG 4 cut(s) 1037, 1208, 1784, 2122
PvuII CAGCTG 3 cut(s) 1781, 1811, 2156
RsaI GTAC 4 cut(s) 1072, 1104, 1826, 1880
RsaNI GTAC 4 cut(s) 1071, 1103, 1825, 1879
RseI CAYNNNNRTG 3 cut(s) 1290, 1593, 1677
SacI GAGCTC 1 cut(s) 1842
SalI GTCGAC 1 cut(s) 1056
SapI GCTCTTC 1 cut(s) 143
SaqAI TTAA 3 cut(s) 384, 582, 986
Sau3AI GATC 8 cut(s) 198, 228, 594, 856, 1318, 1479, 1893, 2083
Sau96I GGNCC 4 cut(s) 761, 1295, 1523, 1598
ScaI AGTACT 1 cut(s) 1104
ScrFI CCNGG 2 cut(s) 1926, 2009
SduI GDGCHC 5 cut(s) 211, 332, 1819, 1834, 1842
SfaNI GCATC 2 cut(s) 823, 1178
SfcI CTRYAG 3 cut(s) 976, 2114, 2123
SfuI TTCGAA 5 cut(s) 23, 647, 1156, 1452, 1793
SgrDI CGTCGACG 1 cut(s) 1056
SinI GGWCC 3 cut(s) 761, 1523, 1598
SmiMI CAYNNNNRTG 3 cut(s) 1290, 1593, 1677
SmlI CTYRAG 2 cut(s) 739, 1850
SmoI CTYRAG 2 cut(s) 739, 1850
SpeI ACTAGT 1 cut(s) 1279
SsiI CCGC 2 cut(s) 86, 165
SspMI CTAG 9 cut(s) 125, 446, 662, 672, 702, 1109, 1212, 1280, 1820
SstI GAGCTC 1 cut(s) 1842
StyD4I CCNGG 2 cut(s) 1924, 2007
StyI CCWWGG 1 cut(s) 1885
TaaI ACNGT 3 cut(s) 730, 980, 1369
TaiI ACGT 2 cut(s) 32, 1054
TatI WGTACW 2 cut(s) 1102, 1878
TauI GCSGC 2 cut(s) 89, 168
TfiI GAWTC 8 cut(s) 13, 261, 649, 1153, 1253, 1438, 1635, 1739
Tru1I TTAA 3 cut(s) 384, 582, 986
Tru9I TTAA 3 cut(s) 384, 582, 986
TscAI CASTG 8 cut(s) 475, 691, 733, 835, 985, 1389, 1413, 1964
TseFI GTSAC 3 cut(s) 79, 599, 813
Tsp45I GTSAC 3 cut(s) 79, 599, 813
TspDTI ATGAA 5 cut(s) 333, 405, 525, 981, 1952
TspGWI ACGGA 2 cut(s) 186, 228
TspRI CASTG 8 cut(s) 475, 691, 733, 835, 985, 1389, 1413, 1964
Van91I CCANNNNNTGG 1 cut(s) 869
VpaK11BI GGWCC 3 cut(s) 761, 1523, 1598
XapI RAATTY 3 cut(s) 753, 932, 1083
XceI RCATGY 1 cut(s) 1561
XmiI GTMKAC 2 cut(s) 1057, 1371
XmnI GAANNNNTTC 2 cut(s) 787, 1539
XspI CTAG 9 cut(s) 125, 446, 662, 672, 702, 1109, 1212, 1280, 1820
ZrmI AGTACT 1 cut(s) 1104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.