Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002672

Physical Location & Seq

Genomic Coordinates Reverse (-)

7845004 .. 7851661

Gene Structure 6658 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g12940.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGCTCAGGCGTCCGGGAGGGGAGGACGGGTGGTAGGGGACTATATAGTGGGCCGGCAAATCGGGTCGGGTTCGTTCTCGGTGGTGTGGCACGCGCGGCACCGCGTCCATGGGACGGAGGTGGCGATCAAGGAGATTGCGACGGGCCGGCTGAACAAGAAGTTGCAGGAGAGCTTAATGTCGGAGATCTTCATCTTGAAGAAGATTAACCATCCCAATATTATTCGCCTGCATGATATAATCGAGGTTCCTGGGAAGATAAATCTTGTACTGGAGTATTGTAGAGGAGGTGATCTTTCTATGTACATTCAACGCCATGGAAAAGTGCCTGAAGCTCTTGCAAAGCACTTCATGCAGCAGCTAGTGGCAGGTCTACAAATGCTTCGCGACAATAATCTTATACATCGAGATCTAAAGCCACAGAATCTCTTGCTGTCCACCAATGACAACAATTCCGTTTTGAAGATTGCAGATTTTGGATTCGCAAGATCTCTGCAACCTCGCGGCCTTGCTGAAACTTTGTGTGGTTCGCCACTTTACATGGCTCCGGAGATAATGCAACTCCAAAAGTACGATGCAAAGGCAGATCTCTGGAGTGTTGGTGCAATTTTATTTCAGCTTGTGACCGATAGCAACAATTTGAGTTCAGAGTGCAAGGATTTATGTCAAAAATTGTTACGCCGCAATCCAGTGGAACGATTAACATTTGAAGAATTCTTTAATCACCCATATCTTGCTCAGAAGGCCCTAGAGAATGCATCAAGGAATAGGAGGGGTTCAAGGATGGGAGACGGATTTCCTATGTCTGATACCGGTGCCATGAGGAACATGGAAGAAAGTTCTCAGGAGGATTGTATGCCTTTCCTGTTGGATGACGATTCTAGTGGTCCTGAGGGGAGCCCTTCTTATTCAAGGAGGAGGCCCTCGATGAAGTCCACTTATGGATTTTCTCTTGATACGAAAGCTGATAGACGAGAAGCATCACCAAGCACATCTTTCAGATATGGCAGTGCAACACGTAAAGAACATTCTACTCTTAGATTTGACAACCATAAACCATTAGATAGAAATCTATATAACCATCTAGGATCCGTGGACCAAAAAGCAGTGAATGCTCGTTCAAGAGCACTTGGGGATTCAATGGAATTGATTGATCAAGATTATGTACTTGTCTTGGGACCCCCAGTTGATGTGTCATCTACTTCAGCAAGTGCTTCAAAGCCAAGCCACTCATCATACAAATTTGAGAGTCTCCCGCAAGAATCTCTAACCACCTCGACAAGTGCCCCAATGCCAATCATTGGTGCAGCTAGTAATAACACGTGTGTCATAGGAAGCTTGGATAGTCAGAGTTCTGCTCCAGGGACATCGCTAGGATCAACTGATATGGCTGATGCTTTGGAGCAACCATCATCACACTGCATGACAAGGCTTAATTCGCTGCAGCAGTGTGTGTCTGCTATTACTGAATTAGTTCATGAAAAGATTGAGGCGGGCAAGCAACTAGAAGCATTCTCAATTCAGCTAGTAATTCTTGCTATTTGGAAGCAAGCACTTCACATATGCCACACACAAGCTGCCTCGGCAATGGAAGGAAGTCCAAGCCAAGAAATTACAAGAATTAGGAGGAGCACGAGCAAGAAGCAGGGTAGTCCTGATGCTGAGGAATGCCTTGAAGCTGTCAACTCTCAAGGGCCGGAAGATCTTTCTGCACAGATTGAGAGGGAATTTCTCCGGGAGGTTGAGCATGCAGAAGATCTAGCAAAGGCCATTGATCCTGGACATACGGAGATGCCGGATGCAATGGAGACAATATTTCAATCTGCTCTAGTTTTCGGGAGACACGGGGGTGTAGATGAGCTTATGGGTGACATGGATAGTGCAGCAGTATTTTATTCAAAAGCTGTGCGTCTCTTGGTATTCCTTCTAGTGGAAGCACCATCCCTCATACTCAACCCACCATTCTCCCTGACCAGTTCTGACCGGTACAGACTTCGAACATACATTGGTATACTCAACAATAGGCAAGGTTATTCAAGGTCGCAGCGGATGGCTCTTTTGAAATGCGAGGAACAATGCCCTCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008219 GO:0009405 GO:0009847 GO:0009987 GO:0012501 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044409 GO:0044419 GO:0048102 GO:0051701 GO:0051704 GO:0051828 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04139 ko04140 ko04150 ko04212 map04136 map04138 map04139 map04140 map04150 map04212

Pfam Domains

Protein Families

Pkinase

Protein Analysis

696

Amino Acids

76.87

Weight (kDa)

6.31

Isoelectric Point (pI)

58.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	15 - 272	2.6e-75	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	18 - 266	3.9e-44	Protein tyrosine and serine/threonine kinase
MIT_ATG1	PF24497	486 - 618	1.3e-55	ATG1, MIT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37840 AT2G37840 AT2G37840 AT3G53930 AT3G53930 AT3G53930 AT3G53930 AT3G53930
fragaria_vesca	FvH4_6g12940 FvH4_6g12940 FvH4_6g12940 FvH4_6g12940 FvH4_6g12940
malus_domestica	MD04G1136900.v1.1 MD08G1035900.v1.1 MD12G1151100.v1.1
prunus_persica	Prupe.6G262900_v2.0.a1 Prupe.6G262900_v2.0.a1 Prupe.6G262900_v2.0.a1
pyrus_communis	pycom04g12420 pycom12g14500 pycom12g14540
rosa_chinensis	RchiOBHm_Chr3g0465041 RchiOBHm_Chr6g0290621
rosa_laevigata	RLG00000024660
rosa_multiflora	Rmu_sc0002119.1_g000016 Rmu_sc0003072.1_g000002 Rmu_sc0004362.1_g000019 Rmu_sc0006588.1_g000005
rosa_roxburghii	Rroxscaffold_6G00415320
rosa_rugosa	Rorug03G0074800 Rorug03G0074800
rosa_samantha	Rh3BG138400 Rh3CG140800 Rh3CG149100 Rh3DG139900 Rh4CG187800 Rh5CG080500
rosa_wichuraiana	Rw3G011320 Rw5G006690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	359
AccB1I	GGYRCC	2 cut(s)	99, 815
AccB7I	CCANNNNNTGG	1 cut(s)	1301
AccI	GTMKAC	2 cut(s)	373, 2011
AccII	CGCG	5 cut(s)	95, 97, 105, 387, 504
AccIII	TCCGGA	1 cut(s)	547
AciI	CCGC	7 cut(s)	97, 103, 504, 682, 1256, 1493, 2047
AclWI	GGATC	4 cut(s)	1083, 1096, 1384, 1769
AcsI	RAATTY	3 cut(s)	713, 1241, 1727
AcuI	CTGAAG	2 cut(s)	351, 1188
AcvI	CACGTG	1 cut(s)	1323
AcyI	GRCGYC	1 cut(s)	11
AfaI	GTAC	5 cut(s)	270, 305, 572, 1167, 1988
AfiI	CCNNNNNNNGG	3 cut(s)	115, 1301, 1930
AflIII	ACRYGT	3 cut(s)	1016, 1320, 1322
AgeI	ACCGGT	2 cut(s)	812, 1983
AjnI	CCWGG	3 cut(s)	250, 1360, 1777
AleI	CACNNNNGTG	1 cut(s)	1848
Alw21I	GWGCWC	2 cut(s)	1129, 1634
Alw26I	GTCTC	5 cut(s)	783, 1256, 1802, 1834, 1916
AlwI	GGATC	4 cut(s)	1083, 1096, 1384, 1769
Aor13HI	TCCGGA	1 cut(s)	547
AoxI	GGCC	7 cut(s)	52, 145, 505, 744, 920, 1694, 1767
ApeKI	GCWGC	8 cut(s)	355, 358, 1307, 1441, 1444, 1577, 1883, 2044
ApoI	RAATTY	3 cut(s)	713, 1241, 1727
AsiGI	ACCGGT	2 cut(s)	812, 1983
Asp700I	GAANNNNTTC	1 cut(s)	1473
AspLEI	GCGC	1 cut(s)	97
AspS9I	GGNCC	8 cut(s)	52, 145, 745, 887, 921, 1096, 1178, 1694
AsuC2I	CCSGG	2 cut(s)	16, 1736
AsuHPI	GGTGA	4 cut(s)	302, 716, 975, 1880
AsuII	TTCGAA	1 cut(s)	1996
AvaII	GGWCC	3 cut(s)	887, 1096, 1178
AxyI	CCTNAGG	1 cut(s)	891
BaeGI	GKGCMC	1 cut(s)	1288
BamHI	GGATCC	1 cut(s)	1088
BanI	GGYRCC	2 cut(s)	99, 815
BanII	GRGCYC	1 cut(s)	902
BauI	CACGAG	1 cut(s)	1633
BbrPI	CACGTG	1 cut(s)	1323
Bbv12I	GWGCWC	2 cut(s)	1129, 1634
BbvCI	CCTCAGC	1 cut(s)	1662
BbvI	GCAGC	8 cut(s)	367, 370, 1319, 1428, 1456, 1564, 1895, 2056
BccI	CCATC	6 cut(s)	219, 778, 1089, 1417, 1948, 2044
BciT130I	CCWGG	3 cut(s)	252, 1362, 1779
BclI	TGATCA	1 cut(s)	1153
BcnI	CCSGG	2 cut(s)	16, 1736
BcoDI	GTCTC	5 cut(s)	783, 1256, 1802, 1834, 1916
BfmI	CTRYAG	1 cut(s)	1442
BfuAI	ACCTGC	1 cut(s)	359
BglII	AGATCT	6 cut(s)	186, 409, 488, 586, 1702, 1756
Bme1390I	CCNGG	5 cut(s)	16, 252, 1362, 1736, 1779
Bme18I	GGWCC	3 cut(s)	887, 1096, 1178
BmgT120I	GGNCC	8 cut(s)	52, 145, 745, 887, 921, 1096, 1178, 1694
BmiI	GGNNCC	8 cut(s)	101, 249, 546, 817, 899, 1090, 1179, 1180
BmrFI	CCNGG	5 cut(s)	16, 252, 1362, 1736, 1779
BmrI	ACTGGG	1 cut(s)	1178
BmsI	GCATC	7 cut(s)	565, 767, 989, 1384, 1648, 1782, 1789
BmuI	ACTGGG	1 cut(s)	1178
BplI	GAGNNNNNCTC	2 cut(s)	1342, 1374
BpmI	CTGGAG	3 cut(s)	293, 613, 1344
Bpu10I	CCTNAGC	2 cut(s)	6, 1662
Bpu14I	TTCGAA	1 cut(s)	1996
BpuEI	CTTGAG	1 cut(s)	1674
BpuMI	CCSGG	2 cut(s)	16, 1736
BsaAI	YACGTR	2 cut(s)	1019, 1323
BsaBI	GATNNNNATC	2 cut(s)	191, 1068
BsaHI	GRCGYC	1 cut(s)	11
BsaJI	CCNNGG	6 cut(s)	109, 251, 316, 1092, 1361, 1581
BsaWI	WCCGGW	3 cut(s)	547, 812, 1983
BsaXI	ACNNNNNCTCC	4 cut(s)	15, 45, 586, 616
Bsc4I	CCNNNNNNNGG	3 cut(s)	115, 1301, 1930
Bse118I	RCCGGY	4 cut(s)	54, 147, 812, 1983
Bse1I	ACTGG	4 cut(s)	276, 689, 1184, 1974
Bse21I	CCTNAGG	1 cut(s)	891
Bse3DI	GCAATG	2 cut(s)	1593, 1809
Bse8I	GATNNNNATC	2 cut(s)	191, 1068
BseAI	TCCGGA	1 cut(s)	547
BseBI	CCWGG	3 cut(s)	252, 1362, 1779
BseDI	CCNNGG	6 cut(s)	109, 251, 316, 1092, 1361, 1581
BseGI	GGATG	6 cut(s)	211, 789, 877, 1804, 1940, 2055
BseJI	GATNNNNATC	2 cut(s)	191, 1068
BseLI	CCNNNNNNNGG	3 cut(s)	115, 1301, 1930
BseMI	GCAATG	2 cut(s)	1593, 1809
BseMII	CTCAG	5 cut(s)	20, 752, 857, 882, 1653
BseNI	ACTGG	4 cut(s)	276, 689, 1184, 1974
BseRI	GAGGAG	3 cut(s)	300, 931, 1642
BseSI	GKGCMC	1 cut(s)	1288
BseXI	GCAGC	8 cut(s)	367, 370, 1319, 1428, 1456, 1564, 1895, 2056
BsgI	GTGCAG	3 cut(s)	1326, 1695, 1902
Bsh1236I	CGCG	5 cut(s)	95, 97, 105, 387, 504
BshFI	GGCC	7 cut(s)	54, 147, 507, 746, 922, 1696, 1769
BshNI	GGYRCC	2 cut(s)	99, 815
BshTI	ACCGGT	2 cut(s)	812, 1983
BsiHKAI	GWGCWC	2 cut(s)	1129, 1634
BsiSI	CCGG	9 cut(s)	15, 55, 148, 548, 813, 1697, 1735, 1796, 1984
BslFI	GGGAC	4 cut(s)	53, 127, 1191, 1378
BslI	CCNNNNNNNGG	3 cut(s)	115, 1301, 1930
BsmAI	GTCTC	5 cut(s)	783, 1256, 1802, 1834, 1916
BsmBI	CGTCTC	2 cut(s)	783, 1916
BsmFI	GGGAC	4 cut(s)	53, 127, 1191, 1378
BsmI	GAATGC	4 cut(s)	760, 1117, 1511, 1673
BsnI	GGCC	7 cut(s)	54, 147, 507, 746, 922, 1696, 1769
Bsp119I	TTCGAA	1 cut(s)	1996
Bsp1286I	GDGCHC	4 cut(s)	902, 1129, 1288, 1634
Bsp13I	TCCGGA	1 cut(s)	547
Bsp1407I	TGTACA	1 cut(s)	303
Bsp19I	CCATGG	2 cut(s)	109, 316
Bsp68I	TCGCGA	1 cut(s)	387
BspACI	CCGC	7 cut(s)	97, 103, 504, 682, 1256, 1493, 2047
BspANI	GGCC	7 cut(s)	54, 147, 507, 746, 922, 1696, 1769
BspCNI	CTCAG	5 cut(s)	19, 751, 856, 883, 1654
BspEI	TCCGGA	1 cut(s)	547
BspFNI	CGCG	5 cut(s)	95, 97, 105, 387, 504
BspHI	TCATGA	1 cut(s)	1477
BspLI	GGNNCC	8 cut(s)	101, 249, 546, 817, 899, 1090, 1179, 1180
BspMAI	CTGCAG	1 cut(s)	1446
BspMI	ACCTGC	1 cut(s)	359
BspPI	GGATC	4 cut(s)	1083, 1096, 1384, 1769
BspT104I	TTCGAA	1 cut(s)	1996
BspT107I	GGYRCC	2 cut(s)	99, 815
BsrDI	GCAATG	2 cut(s)	1593, 1809
BsrFI	RCCGGY	4 cut(s)	54, 147, 812, 1983
BsrGI	TGTACA	1 cut(s)	303
BsrI	ACTGG	4 cut(s)	276, 689, 1184, 1974
BssAI	RCCGGY	4 cut(s)	54, 147, 812, 1983
BssECI	CCNNGG	6 cut(s)	109, 251, 316, 1092, 1361, 1581
BssNAI	GTATAC	1 cut(s)	2012
BssNI	GRCGYC	1 cut(s)	11
BssSI	CACGAG	1 cut(s)	1633
BssT1I	CCWWGG	2 cut(s)	109, 316
Bst1107I	GTATAC	1 cut(s)	2012
Bst2BI	CACGAG	1 cut(s)	1633
Bst2UI	CCWGG	3 cut(s)	252, 1362, 1779
BstACI	GRCGYC	1 cut(s)	11
BstAPI	GCANNNNNTGC	2 cut(s)	352, 1112
BstAUI	TGTACA	1 cut(s)	303
BstBAI	YACGTR	2 cut(s)	1019, 1323
BstBI	TTCGAA	1 cut(s)	1996
BstC8I	GCNNGC	8 cut(s)	56, 93, 149, 230, 1495, 1499, 1551, 1749
BstDEI	CTNAG	7 cut(s)	6, 738, 843, 891, 1037, 1662, 2085
BstDSI	CCRYGG	3 cut(s)	109, 316, 1092
BstF5I	GGATG	6 cut(s)	211, 789, 877, 1804, 1940, 2055
BstFNI	CGCG	5 cut(s)	95, 97, 105, 387, 504
BstHHI	GCGC	1 cut(s)	97
BstMAI	GTCTC	5 cut(s)	783, 1256, 1802, 1834, 1916
BstMWI	GCNNNNNNNGC	6 cut(s)	97, 352, 743, 1112, 1438, 1583
BstNI	CCWGG	3 cut(s)	252, 1362, 1779
BstNSI	RCATGY	1 cut(s)	1751
BstSCI	CCNGG	5 cut(s)	14, 250, 1360, 1734, 1777
BstSFI	CTRYAG	1 cut(s)	1442
BstSLI	GKGCMC	1 cut(s)	1288
BstUI	CGCG	5 cut(s)	95, 97, 105, 387, 504
BstV1I	GCAGC	8 cut(s)	367, 370, 1319, 1428, 1456, 1564, 1895, 2056
BstX2I	RGATCY	7 cut(s)	186, 409, 488, 586, 1088, 1702, 1756
BstYI	RGATCY	7 cut(s)	186, 409, 488, 586, 1088, 1702, 1756
BstZ17I	GTATAC	1 cut(s)	2012
Bsu36I	CCTNAGG	1 cut(s)	891
BsuRI	GGCC	7 cut(s)	54, 147, 507, 746, 922, 1696, 1769
BtgI	CCRYGG	3 cut(s)	109, 316, 1092
BtgZI	GCGATG	1 cut(s)	1353
BtsCI	GGATG	6 cut(s)	211, 789, 877, 1804, 1940, 2055
BtsI	GCAGTG	4 cut(s)	1015, 1113, 1417, 1454
BtsIMutI	CAGTG	5 cut(s)	696, 1015, 1113, 1417, 1454
BtuMI	TCGCGA	1 cut(s)	387
BveI	ACCTGC	1 cut(s)	359
Cac8I	GCNNGC	8 cut(s)	56, 93, 149, 230, 1495, 1499, 1551, 1749
CciI	TCATGA	1 cut(s)	1477
CfoI	GCGC	1 cut(s)	97
Cfr10I	RCCGGY	4 cut(s)	54, 147, 812, 1983
Cfr13I	GGNCC	8 cut(s)	52, 145, 745, 887, 921, 1096, 1178, 1694
CseI	GACGC	2 cut(s)	94, 1898
Csp6I	GTAC	5 cut(s)	269, 304, 571, 1166, 1987
CspAI	ACCGGT	2 cut(s)	812, 1983
CviQI	GTAC	5 cut(s)	269, 304, 571, 1166, 1987
DdeI	CTNAG	7 cut(s)	6, 738, 843, 891, 1037, 1662, 2085
Eco130I	CCWWGG	2 cut(s)	109, 316
Eco24I	GRGCYC	1 cut(s)	902
Eco47I	GGWCC	3 cut(s)	887, 1096, 1178
Eco57I	CTGAAG	2 cut(s)	351, 1188
Eco72I	CACGTG	1 cut(s)	1323
Eco81I	CCTNAGG	1 cut(s)	891
EcoO109I	RGGNCCY	3 cut(s)	745, 921, 1178
EcoRI	GAATTC	1 cut(s)	713
EcoRII	CCWGG	3 cut(s)	250, 1360, 1777
EcoT14I	CCWWGG	2 cut(s)	109, 316
EcoT22I	ATGCAT	1 cut(s)	760
EcoT38I	GRGCYC	1 cut(s)	902
ErhI	CCWWGG	2 cut(s)	109, 316
Esp3I	CGTCTC	2 cut(s)	783, 1916
FalI	AAGNNNNNCTT	2 cut(s)	979, 1011
FaqI	GGGAC	4 cut(s)	53, 127, 1191, 1378
FauI	CCCGC	2 cut(s)	1263, 1486
FauNDI	CATATG	1 cut(s)	1562
FbaI	TGATCA	1 cut(s)	1153
FblI	GTMKAC	2 cut(s)	373, 2011
FokI	GGATG	6 cut(s)	198, 796, 884, 1811, 1927, 2062
FriOI	GRGCYC	1 cut(s)	902
GlaI	GCGC	1 cut(s)	96
GsuI	CTGGAG	3 cut(s)	293, 613, 1344
HaeIII	GGCC	7 cut(s)	54, 147, 507, 746, 922, 1696, 1769
HapII	CCGG	9 cut(s)	15, 55, 148, 548, 813, 1697, 1735, 1796, 1984
HgaI	GACGC	2 cut(s)	94, 1898
HhaI	GCGC	1 cut(s)	97
Hin1I	GRCGYC	1 cut(s)	11
Hin6I	GCGC	1 cut(s)	95
HinP1I	GCGC	1 cut(s)	95
HincII	GTYRAC	1 cut(s)	1684
HindII	GTYRAC	1 cut(s)	1684
HindIII	AAGCTT	1 cut(s)	1336
HinfI	GANTC	6 cut(s)	424, 480, 878, 1136, 1249, 1262
HpaII	CCGG	9 cut(s)	15, 55, 148, 548, 813, 1697, 1735, 1796, 1984
HphI	GGTGA	4 cut(s)	302, 716, 975, 1880
Hpy166II	GTNNAC	6 cut(s)	374, 438, 936, 1096, 1684, 2012
Hpy188I	TCNGA	7 cut(s)	184, 649, 741, 808, 1001, 1350, 1981
Hpy8I	GTNNAC	6 cut(s)	374, 438, 936, 1096, 1684, 2012
Hpy99I	CGWCG	1 cut(s)	145
HpyAV	CCTTC	4 cut(s)	736, 912, 1586, 1934
HpyCH4IV	ACGT	2 cut(s)	1018, 1322
HpyF10VI	GCNNNNNNNGC	6 cut(s)	97, 352, 743, 1112, 1438, 1583
HpyF3I	CTNAG	7 cut(s)	6, 738, 843, 891, 1037, 1662, 2085
HpySE526I	ACGT	2 cut(s)	1018, 1322
Hsp92I	GRCGYC	1 cut(s)	11
HspAI	GCGC	1 cut(s)	95
KflI	GGGWCCC	1 cut(s)	1178
Kpn2I	TCCGGA	1 cut(s)	547
KroI	GCCGGC	2 cut(s)	54, 147
KroNI	GCCGGC	2 cut(s)	56, 149
Ksp22I	TGATCA	1 cut(s)	1153
LmnI	GCTCC	5 cut(s)	550, 897, 1363, 1402, 1629
Lsp1109I	GCAGC	8 cut(s)	367, 370, 1319, 1428, 1456, 1564, 1895, 2056
LweI	GCATC	7 cut(s)	565, 767, 989, 1384, 1648, 1782, 1789
MaeII	ACGT	2 cut(s)	1018, 1322
MaeIII	GTNAC	3 cut(s)	622, 675, 1868
MboII	GAAGA	9 cut(s)	181, 211, 214, 268, 475, 722, 845, 1712, 1766
MflI	RGATCY	7 cut(s)	186, 409, 488, 586, 1088, 1702, 1756
MhlI	GDGCHC	4 cut(s)	902, 1129, 1288, 1634
MlyI	GAGTC	1 cut(s)	1258
MmeI	TCCRAC	2 cut(s)	162, 849
Mph1103I	ATGCAT	1 cut(s)	760
MroI	TCCGGA	1 cut(s)	547
MroNI	GCCGGC	2 cut(s)	54, 147
MroXI	GAANNNNTTC	1 cut(s)	1473
MseI	TTAA	5 cut(s)	176, 207, 701, 720, 1434
MslI	CAYNNNNRTG	1 cut(s)	1848
MspA1I	CMGCKG	1 cut(s)	2047
MspI	CCGG	9 cut(s)	15, 55, 148, 548, 813, 1697, 1735, 1796, 1984
MspR9I	CCNGG	5 cut(s)	16, 252, 1362, 1736, 1779
Mva1269I	GAATGC	4 cut(s)	760, 1117, 1511, 1673
MvaI	CCWGG	3 cut(s)	252, 1362, 1779
MvnI	CGCG	5 cut(s)	95, 97, 105, 387, 504
MwoI	GCNNNNNNNGC	6 cut(s)	97, 352, 743, 1112, 1438, 1583
NaeI	GCCGGC	2 cut(s)	56, 149
NciI	CCSGG	2 cut(s)	16, 1736
NcoI	CCATGG	2 cut(s)	109, 316
NdeI	CATATG	1 cut(s)	1562
NgoMIV	GCCGGC	2 cut(s)	54, 147
NlaIV	GGNNCC	8 cut(s)	101, 249, 546, 817, 899, 1090, 1179, 1180
NmeAIII	GCCGAG	1 cut(s)	1562
NmuCI	GTSAC	2 cut(s)	622, 1868
NruI	TCGCGA	1 cut(s)	387
NsiI	ATGCAT	1 cut(s)	760
NspI	RCATGY	1 cut(s)	1751
NspV	TTCGAA	1 cut(s)	1996
OliI	CACNNNNGTG	1 cut(s)	1848
PaeI	GCATGC	1 cut(s)	1751
PagI	TCATGA	1 cut(s)	1477
PcsI	WCGNNNNNNNCGW	1 cut(s)	122
PctI	GAATGC	4 cut(s)	760, 1117, 1511, 1673
PdiI	GCCGGC	2 cut(s)	56, 149
PdmI	GAANNNNTTC	1 cut(s)	1473
PfeI	GAWTC	5 cut(s)	424, 480, 878, 1136, 1262
PflMI	CCANNNNNTGG	1 cut(s)	1301
PfoI	TCCNGGA	3 cut(s)	14, 1734, 1777
PinAI	ACCGGT	2 cut(s)	812, 1983
PleI	GAGTC	1 cut(s)	1257
PmaCI	CACGTG	1 cut(s)	1323
PmlI	CACGTG	1 cut(s)	1323
PpsI	GAGTC	1 cut(s)	1257
Ppu21I	YACGTR	2 cut(s)	1019, 1323
PpuMI	RGGWCCY	1 cut(s)	1178
Psp5II	RGGWCCY	1 cut(s)	1178
Psp6I	CCWGG	3 cut(s)	250, 1360, 1777
PspCI	CACGTG	1 cut(s)	1323
PspGI	CCWGG	3 cut(s)	250, 1360, 1777
PspN4I	GGNNCC	8 cut(s)	101, 249, 546, 817, 899, 1090, 1179, 1180
PspPI	GGNCC	8 cut(s)	52, 145, 745, 887, 921, 1096, 1178, 1694
PspPPI	RGGWCCY	1 cut(s)	1178
PstI	CTGCAG	1 cut(s)	1446
PsuI	RGATCY	7 cut(s)	186, 409, 488, 586, 1088, 1702, 1756
RruI	TCGCGA	1 cut(s)	387
RsaI	GTAC	5 cut(s)	270, 305, 572, 1167, 1988
RsaNI	GTAC	5 cut(s)	269, 304, 571, 1166, 1987
RseI	CAYNNNNRTG	1 cut(s)	1848
SaqAI	TTAA	5 cut(s)	176, 207, 701, 720, 1434
Sau96I	GGNCC	8 cut(s)	52, 145, 745, 887, 921, 1096, 1178, 1694
SchI	GAGTC	1 cut(s)	1258
ScrFI	CCNGG	5 cut(s)	16, 252, 1362, 1736, 1779
SduI	GDGCHC	4 cut(s)	902, 1129, 1288, 1634
SfaNI	GCATC	7 cut(s)	565, 767, 989, 1384, 1648, 1782, 1789
SfcI	CTRYAG	1 cut(s)	1442
SfuI	TTCGAA	1 cut(s)	1996
SinI	GGWCC	3 cut(s)	887, 1096, 1178
SmiMI	CAYNNNNRTG	1 cut(s)	1848
SmlI	CTYRAG	1 cut(s)	1689
SmoI	CTYRAG	1 cut(s)	1689
SphI	GCATGC	1 cut(s)	1751
SsiI	CCGC	7 cut(s)	97, 103, 504, 682, 1256, 1493, 2047
SspI	AATATT	2 cut(s)	220, 1815
StyD4I	CCNGG	5 cut(s)	14, 250, 1360, 1734, 1777
StyI	CCWWGG	2 cut(s)	109, 316
TaiI	ACGT	2 cut(s)	1021, 1325
TaqI	TCGA	5 cut(s)	243, 406, 926, 1277, 1996
TaqII	GACCGA	1 cut(s)	641
TatI	WGTACW	3 cut(s)	268, 303, 1165
TauI	GCSGC	3 cut(s)	100, 507, 684
TfiI	GAWTC	5 cut(s)	424, 480, 878, 1136, 1262
Tru1I	TTAA	5 cut(s)	176, 207, 701, 720, 1434
Tru9I	TTAA	5 cut(s)	176, 207, 701, 720, 1434
TscAI	CASTG	5 cut(s)	696, 1015, 1113, 1424, 1454
TseFI	GTSAC	2 cut(s)	622, 1868
TseI	GCWGC	8 cut(s)	355, 358, 1307, 1441, 1444, 1577, 1883, 2044
Tsp45I	GTSAC	2 cut(s)	622, 1868
TspDTI	ATGAA	5 cut(s)	181, 340, 944, 1466, 1494
TspGWI	ACGGA	5 cut(s)	131, 445, 807, 1081, 1802
TspRI	CASTG	5 cut(s)	696, 1015, 1113, 1424, 1454
Van91I	CCANNNNNTGG	1 cut(s)	1301
VpaK11BI	GGWCC	3 cut(s)	887, 1096, 1178
XapI	RAATTY	3 cut(s)	713, 1241, 1727
XceI	RCATGY	1 cut(s)	1751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	826
XmiI	GTMKAC	2 cut(s)	373, 2011
XmnI	GAANNNNTTC	1 cut(s)	1473
Zsp2I	ATGCAT	1 cut(s)	760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.