Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0002672

Physical Location & Seq

Genomic Coordinates Forward (+)

15407461 .. 15413032

Gene Structure 5572 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g12420.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGCTCAGGGGTCCGGGAGGGGGAGGGTCGTCGGGGATTATCTGGTGGGTCGGCAAATTGGGTCGGGTTCGTTCTCGGTGGTTTGGCACGCGCGCCACCGCGTTCACGGGACGGAGGTGGCGATTAAGGAGATCGCGACGGGGCGGCTGAACAAGAAGTTGCAGGAGAGTTTAATGTCGGAGATTTTCATACTGAAGAAGATTAACCACCCGAATATTATTCGGTTGCACGATATTATAGAGGTTCCTGGGAAGATAAATCTTGTTTTAGAGTATTGCAGAGGTGGTGATCTTTCTATGTATATACATCGCCATGGAAAAGTACCCGAAGCTCTTGCAGAGCACTTCATGCAGCAGCTAGTCGCTGGTCTGCAAATGCTTCGTGACAACAATCTTATACATCGGGATCTCAAGCCACAGAATCTCTTGCTGTCCACCAATGACAACAAATCTGTCTTGAAGATTGCAGATTTTGGATTTGCAAGATCTCTGCAACCTCGAGGCCTTGCTGAAACCTTGTGTGGTTCACCACTTTACATGGCTCCAGAGATAATGCAACTTCAAAAGTATGATGCAAAGGCAGATCTCTGGAGTGTTGGTGCAATTTTATTTCAACTCGTAACTGGGAGAACCCCATTTACAGGAAACAATCAGATACAGTTGCTTCAGAACATAATGAAAGCAACTGAGTTGCAGTTCCCTTCAGATAGCAACAATTTGAGTTCAGAGTGCAAGGACTTGTGTCAGAAATTGTTACGCCGCAATCCATTGGAACGCCTAACATTTGAAGAGTTTTTTAATCACCCATTTCTATCTCAGCAGTCACCATATTCGAGGAGTAGGAGGGAATCACAAATGGCAGAGGGATTTCCTACATCTGAATGCAATGCAATGAGGAACATGGAGGAAAGTTCTCAAGAAGATTGTCTACCTTTCCTTTTAGATGATGATTCCAGTGGCCCTGAGGGGAGCCCATCCTGTTCAAGGAGGAGGTCCTTGATGAATTCCACTTACGGATTTTCTGTCGATACAAAAGGTGATAGACAGGAAGCATCACCTACCACTTTGTACAGATATGGCAGTGCAACACGTAAAGAAAATTCTAGTCTTAGGTTGGACAGCTATAGATCGTCAGATAGAAATCCAACTGACCCTCTAAGATCTGTGCACAAAAAACCAGTGAATGCTCGATCAAGAGTTGTGGATTCACTGGAGTTGATGATCGATCAAGATTATGTTCTTGTGTCTGGACCTCCAGTTGATGTGTCTTCTTCCTCGGCTAGTGCTTCCAAACCAAGCCCTTCTTTCTACAAATCTCAGAGTCTCCCTCGATCCTTAACCACCTCATCAAGTGCCCCAATGCTAATCACGGGTGCAGCAGCTAATAGTAACATGCATTGCATAGGAAGCTCAGATAGTCAGAGTTCTGCTCCAGGAACATCACTAGGATCAACGGACACGGGAGATGCTTTGGAGCAGCCATCAACACACTGCATGACAAGGCTTAGTTCATTGCAGCAATGTGTGTCTGCTATTACTGAATTAGTTCATGAAAAGACTGAGGCAAGGAAGCATCTAGAAGCATTCTCAATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCTCTTCATATATGCCATACGCAGGCTGCCTCAGCTATGGAAGGAAGTCCGAGTCAAGAGACTGCAAGATTTAGGACCACCAGAAAGGAGCAAAGTAGTCCTGATATGGACGAAAGCCTTGATGTTAACACTCAAGGACCCGAAGATATTTCTTCTGAGATTCAGCGGGAATTTCTCCGAGAGGTTGAGCATGCAGAAGAACTTGCAAAGGCTATTGAGCCCGGACATGCAGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCTCTTGTTTTTGGGAGACATGGGGGTGTAGATGAACTCATGGGTGACATGGAAAGTGCCGCAGTGTTTTATACAAAAGCTGTGCGTCTCTTGGTCTTTCTTCTAGTGGAAGCACCATCCCTCATTCTCAACCCGCCCTTTTCCCTGACAAACACTGACCGGTATAGGCTTCGAACTTACATTGGTATACTTAATAATAGGCAAGGTTACTCGAGGTCACAGCGGATGGCGATTTTGAAATGTGAGGAGCAACAGTGCCCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008219 GO:0009405 GO:0009847 GO:0009987 GO:0012501 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044409 GO:0044419 GO:0048102 GO:0051701 GO:0051704 GO:0051828 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04139 ko04140 ko04150 ko04212 map04136 map04138 map04139 map04140 map04150 map04212

Pfam Domains

Protein Families

Pkinase

Protein Analysis

719

Amino Acids

79.82

Weight (kDa)

6.31

Isoelectric Point (pI)

64.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37840 AT2G37840 AT2G37840 AT3G53930 AT3G53930 AT3G53930 AT3G53930 AT3G53930
fragaria_vesca	FvH4_6g12940 FvH4_6g12940 FvH4_6g12940 FvH4_6g12940 FvH4_6g12940
malus_domestica	MD04G1136900.v1.1 MD08G1035900.v1.1 MD12G1151100.v1.1
prunus_persica	Prupe.6G262900_v2.0.a1 Prupe.6G262900_v2.0.a1 Prupe.6G262900_v2.0.a1
pyrus_communis	pycom04g12420 pycom12g14500 pycom12g14540
rosa_chinensis	RchiOBHm_Chr3g0465041 RchiOBHm_Chr6g0290621
rosa_laevigata	RLG00000024660
rosa_multiflora	Rmu_sc0002119.1_g000016 Rmu_sc0003072.1_g000002 Rmu_sc0004362.1_g000019 Rmu_sc0006588.1_g000005
rosa_roxburghii	Rroxscaffold_6G00415320
rosa_rugosa	Rorug03G0074800 Rorug03G0074800
rosa_samantha	Rh3BG138400 Rh3CG140800 Rh3CG149100 Rh3DG139900 Rh4CG187800 Rh5CG080500
rosa_wichuraiana	Rw3G011320 Rw5G006690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	498
AccI	GTMKAC	2 cut(s)	928, 2077
AccII	CGCG	4 cut(s)	92, 94, 102, 137
AciI	CCGC	7 cut(s)	100, 145, 760, 1789, 1950, 2024, 2113
AclWI	GGATC	3 cut(s)	414, 1326, 1456
AcsI	RAATTY	3 cut(s)	1003, 1099, 1793
AcuI	CTGAAG	3 cut(s)	215, 650, 687
AfaI	GTAC	2 cut(s)	324, 1070
AfiI	CCNNNNNNNGG	4 cut(s)	21, 641, 984, 1645
AflIII	ACRYGT	1 cut(s)	1088
AgeI	ACCGGT	1 cut(s)	2049
AgsI	TTSAA	7 cut(s)	460, 563, 614, 788, 984, 1886, 2128
AjnI	CCWGG	2 cut(s)	247, 1432
AluBI	AGCT	9 cut(s)	332, 358, 1122, 1382, 1410, 1597, 1625, 1658, 1970
AluI	AGCT	9 cut(s)	332, 358, 1122, 1382, 1410, 1597, 1625, 1658, 1970
Alw21I	GWGCWC	2 cut(s)	345, 1170
Alw26I	GTCTC	5 cut(s)	1328, 1676, 1868, 1900, 1982
Alw44I	GTGCAC	1 cut(s)	1166
AlwI	GGATC	3 cut(s)	414, 1326, 1456
Ama87I	CYCGRG	2 cut(s)	498, 2101
AoxI	GGCC	2 cut(s)	502, 958
ApaLI	GTGCAC	1 cut(s)	1166
ApeKI	GCWGC	7 cut(s)	352, 355, 1376, 1379, 1477, 1516, 1649
ApoI	RAATTY	3 cut(s)	1003, 1099, 1793
AsiGI	ACCGGT	1 cut(s)	2049
Asp700I	GAANNNNTTC	1 cut(s)	1545
AspLEI	GCGC	2 cut(s)	94, 96
AspS9I	GGNCC	6 cut(s)	12, 959, 993, 1250, 1698, 1760
AsuC2I	CCSGG	2 cut(s)	16, 1845
AsuHPI	GGTGA	7 cut(s)	299, 519, 794, 816, 1047, 1049, 1946
AsuII	TTCGAA	1 cut(s)	2062
AvaI	CYCGRG	2 cut(s)	498, 2101
AvaII	GGWCC	5 cut(s)	12, 993, 1250, 1698, 1760
AxyI	CCTNAGG	1 cut(s)	963
BaeGI	GKGCMC	3 cut(s)	1170, 1357, 2150
BanII	GRGCYC	2 cut(s)	974, 1845
BarI	GAAGNNNNNNTAC	2 cut(s)	912, 944
BbsI	GAAGAC	1 cut(s)	1260
Bbv12I	GWGCWC	2 cut(s)	345, 1170
BbvCI	CCTCAGC	1 cut(s)	1654
BbvI	GCAGC	7 cut(s)	364, 367, 1388, 1391, 1489, 1528, 1636
BccI	CCATC	4 cut(s)	982, 1489, 2014, 2110
BcgI	CGANNNNNNTGC	4 cut(s)	317, 351, 362, 396
BciT130I	CCWGG	2 cut(s)	249, 1434
BcnI	CCSGG	2 cut(s)	16, 1845
BcoDI	GTCTC	5 cut(s)	1328, 1676, 1868, 1900, 1982
BfaI	CTAG	6 cut(s)	359, 1104, 1281, 1445, 1577, 1994
BfmI	CTRYAG	1 cut(s)	1123
BglII	AGATCT	3 cut(s)	485, 583, 1160
Bme1390I	CCNGG	4 cut(s)	16, 249, 1434, 1845
Bme18I	GGWCC	5 cut(s)	12, 993, 1250, 1698, 1760
BmeT110I	CYCGRG	2 cut(s)	498, 2101
BmgT120I	GGNCC	6 cut(s)	12, 959, 993, 1250, 1698, 1760
BmiI	GGNNCC	5 cut(s)	13, 246, 543, 971, 1762
BmrFI	CCNGG	4 cut(s)	16, 249, 1434, 1845
BmrI	ACTGGG	1 cut(s)	633
BmsI	GCATC	6 cut(s)	562, 1061, 1456, 1582, 1848, 1855
BmuI	ACTGGG	1 cut(s)	633
BoxI	GACNNNNGTC	1 cut(s)	741
BpiI	GAAGAC	1 cut(s)	1260
BplI	GAGNNNNNCTC	4 cut(s)	1312, 1344, 1414, 1446
BpmI	CTGGAG	5 cut(s)	528, 610, 1232, 1239, 1416
Bpu10I	CCTNAGC	2 cut(s)	6, 1654
Bpu14I	TTCGAA	1 cut(s)	2062
BpuEI	CTTGAG	3 cut(s)	395, 900, 1740
BpuMI	CCSGG	2 cut(s)	16, 1845
Bsa29I	ATCGAT	1 cut(s)	1224
BsaAI	YACGTR	1 cut(s)	1091
BsaBI	GATNNNNATC	1 cut(s)	1140
BsaJI	CCNNGG	3 cut(s)	248, 313, 1275
BsaWI	WCCGGW	1 cut(s)	2049
BsaXI	ACNNNNNCTCC	3 cut(s)	583, 613, 2129
Bsc4I	CCNNNNNNNGG	4 cut(s)	21, 641, 984, 1645
Bse118I	RCCGGY	1 cut(s)	2049
Bse1I	ACTGG	5 cut(s)	628, 954, 1178, 1215, 1256
Bse21I	CCTNAGG	1 cut(s)	963
Bse3DI	GCAATG	6 cut(s)	892, 897, 1396, 1511, 1526, 1875
Bse8I	GATNNNNATC	1 cut(s)	1140
BseBI	CCWGG	2 cut(s)	249, 1434
BseCI	ATCGAT	1 cut(s)	1224
BseDI	CCNNGG	3 cut(s)	248, 313, 1275
BseGI	GGATG	3 cut(s)	974, 2006, 2121
BseJI	GATNNNNATC	1 cut(s)	1140
BseLI	CCNNNNNNNGG	4 cut(s)	21, 641, 984, 1645
BseMI	GCAATG	6 cut(s)	892, 897, 1396, 1511, 1526, 1875
BseMII	CTCAG	9 cut(s)	20, 678, 830, 954, 1331, 1425, 1551, 1668, 1770
BseNI	ACTGG	5 cut(s)	628, 954, 1178, 1215, 1256
BsePI	GCGCGC	1 cut(s)	92
BseRI	GAGGAG	3 cut(s)	850, 1003, 2150
BseSI	GKGCMC	3 cut(s)	1170, 1357, 2150
BseXI	GCAGC	7 cut(s)	364, 367, 1388, 1391, 1489, 1528, 1636
BsgI	GTGCAG	1 cut(s)	1395
Bsh1236I	CGCG	4 cut(s)	92, 94, 102, 137
BshFI	GGCC	2 cut(s)	504, 960
BshTI	ACCGGT	1 cut(s)	2049
BshVI	ATCGAT	1 cut(s)	1224
BsiHKAI	GWGCWC	2 cut(s)	345, 1170
BsiHKCI	CYCGRG	2 cut(s)	498, 2101
BsiSI	CCGG	3 cut(s)	15, 1845, 2050
BslFI	GGGAC	1 cut(s)	124
BslI	CCNNNNNNNGG	4 cut(s)	21, 641, 984, 1645
BsmAI	GTCTC	5 cut(s)	1328, 1676, 1868, 1900, 1982
BsmBI	CGTCTC	1 cut(s)	1982
BsmFI	GGGAC	1 cut(s)	124
BsmI	GAATGC	3 cut(s)	887, 1189, 1583
BsnI	GGCC	2 cut(s)	504, 960
BsoBI	CYCGRG	2 cut(s)	498, 2101
Bsp119I	TTCGAA	1 cut(s)	2062
Bsp1286I	GDGCHC	6 cut(s)	345, 974, 1170, 1357, 1845, 2150
Bsp1407I	TGTACA	1 cut(s)	1068
Bsp19I	CCATGG	1 cut(s)	313
Bsp68I	TCGCGA	1 cut(s)	137
BspACI	CCGC	7 cut(s)	100, 145, 760, 1789, 1950, 2024, 2113
BspANI	GGCC	2 cut(s)	504, 960
BspCNI	CTCAG	9 cut(s)	19, 679, 829, 955, 1330, 1424, 1552, 1667, 1771
BspDI	ATCGAT	1 cut(s)	1224
BspFNI	CGCG	4 cut(s)	92, 94, 102, 137
BspHI	TCATGA	1 cut(s)	1549
BspLI	GGNNCC	5 cut(s)	13, 246, 543, 971, 1762
BspPI	GGATC	3 cut(s)	414, 1326, 1456
BspQI	GCTCTTC	1 cut(s)	1632
BspT104I	TTCGAA	1 cut(s)	2062
BsrDI	GCAATG	6 cut(s)	892, 897, 1396, 1511, 1526, 1875
BsrFI	RCCGGY	1 cut(s)	2049
BsrGI	TGTACA	1 cut(s)	1068
BsrI	ACTGG	5 cut(s)	628, 954, 1178, 1215, 1256
BssAI	RCCGGY	1 cut(s)	2049
BssECI	CCNNGG	3 cut(s)	248, 313, 1275
BssHII	GCGCGC	1 cut(s)	92
BssNAI	GTATAC	1 cut(s)	2078
BssT1I	CCWWGG	1 cut(s)	313
Bst1107I	GTATAC	1 cut(s)	2078
Bst2UI	CCWGG	2 cut(s)	249, 1434
Bst4CI	ACNGT	2 cut(s)	660, 2145
Bst6I	CTCTTC	2 cut(s)	783, 1632
BstAPI	GCANNNNNTGC	1 cut(s)	349
BstAUI	TGTACA	1 cut(s)	1068
BstBAI	YACGTR	1 cut(s)	1091
BstBI	TTCGAA	1 cut(s)	2062
BstC8I	GCNNGC	5 cut(s)	90, 94, 1623, 1647, 1815
BstDSI	CCRYGG	1 cut(s)	313
BstENI	CCTNNNNNAGG	1 cut(s)	982
BstF5I	GGATG	3 cut(s)	974, 2006, 2121
BstFNI	CGCG	4 cut(s)	92, 94, 102, 137
BstHHI	GCGC	2 cut(s)	94, 96
BstMAI	GTCTC	5 cut(s)	1328, 1676, 1868, 1900, 1982
BstMWI	GCNNNNNNNGC	3 cut(s)	349, 1407, 1655
BstNI	CCWGG	2 cut(s)	249, 1434
BstNSI	RCATGY	3 cut(s)	1396, 1817, 1853
BstPAI	GACNNNNGTC	1 cut(s)	741
BstSCI	CCNGG	4 cut(s)	14, 247, 1432, 1843
BstSFI	CTRYAG	1 cut(s)	1123
BstSLI	GKGCMC	3 cut(s)	1170, 1357, 2150
BstUI	CGCG	4 cut(s)	92, 94, 102, 137
BstV1I	GCAGC	7 cut(s)	364, 367, 1388, 1391, 1489, 1528, 1636
BstV2I	GAAGAC	1 cut(s)	1260
BstX2I	RGATCY	4 cut(s)	406, 485, 583, 1160
BstYI	RGATCY	4 cut(s)	406, 485, 583, 1160
BstZ17I	GTATAC	1 cut(s)	2078
Bsu15I	ATCGAT	1 cut(s)	1224
Bsu36I	CCTNAGG	1 cut(s)	963
BsuRI	GGCC	2 cut(s)	504, 960
BsuTUI	ATCGAT	1 cut(s)	1224
BtgI	CCRYGG	1 cut(s)	313
BtgZI	GCGATG	1 cut(s)	293
BtsCI	GGATG	3 cut(s)	974, 2006, 2121
BtsI	GCAGTG	3 cut(s)	1087, 1489, 1959
BtsIMutI	CAGTG	8 cut(s)	961, 1087, 1185, 1208, 1489, 1959, 2043, 2150
BtuMI	TCGCGA	1 cut(s)	137
Cac8I	GCNNGC	5 cut(s)	90, 94, 1623, 1647, 1815
CciI	TCATGA	1 cut(s)	1549
CfoI	GCGC	2 cut(s)	94, 96
Cfr10I	RCCGGY	1 cut(s)	2049
Cfr13I	GGNCC	6 cut(s)	12, 959, 993, 1250, 1698, 1760
ClaI	ATCGAT	1 cut(s)	1224
CseI	GACGC	1 cut(s)	1964
Csp6I	GTAC	2 cut(s)	323, 1069
CspAI	ACCGGT	1 cut(s)	2049
CspCI	CAANNNNNGTGG	2 cut(s)	1182, 1217
CviQI	GTAC	2 cut(s)	323, 1069
Eam1104I	CTCTTC	2 cut(s)	783, 1632
EarI	CTCTTC	2 cut(s)	783, 1632
Eco130I	CCWWGG	1 cut(s)	313
Eco147I	AGGCCT	1 cut(s)	504
Eco24I	GRGCYC	2 cut(s)	974, 1845
Eco47I	GGWCC	5 cut(s)	12, 993, 1250, 1698, 1760
Eco57I	CTGAAG	3 cut(s)	215, 650, 687
Eco81I	CCTNAGG	1 cut(s)	963
Eco88I	CYCGRG	2 cut(s)	498, 2101
EcoNI	CCTNNNNNAGG	1 cut(s)	982
EcoO109I	RGGNCCY	2 cut(s)	993, 1760
EcoRI	GAATTC	1 cut(s)	1003
EcoRII	CCWGG	2 cut(s)	247, 1432
EcoT14I	CCWWGG	1 cut(s)	313
EcoT22I	ATGCAT	1 cut(s)	1398
EcoT38I	GRGCYC	2 cut(s)	974, 1845
ErhI	CCWWGG	1 cut(s)	313
Esp3I	CGTCTC	1 cut(s)	1982
FalI	AAGNNNNNCTT	2 cut(s)	1288, 1320
FaqI	GGGAC	1 cut(s)	124
FauI	CCCGC	2 cut(s)	1782, 2031
FblI	GTMKAC	2 cut(s)	928, 2077
FokI	GGATG	3 cut(s)	961, 1993, 2128
FriOI	GRGCYC	2 cut(s)	974, 1845
FspBI	CTAG	6 cut(s)	359, 1104, 1281, 1445, 1577, 1994
GlaI	GCGC	2 cut(s)	93, 95
GsuI	CTGGAG	5 cut(s)	528, 610, 1232, 1239, 1416
HaeIII	GGCC	2 cut(s)	504, 960
HapII	CCGG	3 cut(s)	15, 1845, 2050
HgaI	GACGC	1 cut(s)	1964
HhaI	GCGC	2 cut(s)	94, 96
Hin6I	GCGC	2 cut(s)	92, 94
HinP1I	GCGC	2 cut(s)	92, 94
HincII	GTYRAC	1 cut(s)	1750
HindII	GTYRAC	1 cut(s)	1750
HinfI	GANTC	7 cut(s)	421, 848, 950, 1205, 1321, 1675, 1783
HpaI	GTTAAC	1 cut(s)	1750
HpaII	CCGG	3 cut(s)	15, 1845, 2050
HphI	GGTGA	7 cut(s)	299, 519, 794, 816, 1047, 1049, 1946
Hpy166II	GTNNAC	7 cut(s)	106, 435, 527, 929, 1168, 1750, 2078
Hpy8I	GTNNAC	7 cut(s)	106, 435, 527, 929, 1168, 1750, 2078
Hpy99I	CGWCG	2 cut(s)	35, 142
HpyAV	CCTTC	3 cut(s)	711, 1311, 1658
HpyCH4III	ACNGT	2 cut(s)	660, 2145
HpyCH4IV	ACGT	1 cut(s)	1090
HpyF10VI	GCNNNNNNNGC	3 cut(s)	349, 1407, 1655
HpySE526I	ACGT	1 cut(s)	1090
HspAI	GCGC	2 cut(s)	92, 94
KspAI	GTTAAC	1 cut(s)	1750
LguI	GCTCTTC	1 cut(s)	1632
LmnI	GCTCC	6 cut(s)	547, 969, 1435, 1474, 1711, 2137
Lsp1109I	GCAGC	7 cut(s)	364, 367, 1388, 1391, 1489, 1528, 1636
LweI	GCATC	6 cut(s)	562, 1061, 1456, 1582, 1848, 1855
MaeI	CTAG	6 cut(s)	359, 1104, 1281, 1445, 1577, 1994
MaeII	ACGT	1 cut(s)	1090
MaeIII	GTNAC	8 cut(s)	383, 619, 753, 822, 1388, 1934, 2096, 2106
MflI	RGATCY	4 cut(s)	406, 485, 583, 1160
MhlI	GDGCHC	6 cut(s)	345, 974, 1170, 1357, 1845, 2150
MlyI	GAGTC	2 cut(s)	1330, 1684
MmeI	TCCRAC	3 cut(s)	159, 1095, 1169
Mph1103I	ATGCAT	1 cut(s)	1398
MroXI	GAANNNNTTC	1 cut(s)	1545
MseI	TTAA	7 cut(s)	126, 173, 204, 798, 1337, 1749, 2082
MslI	CAYNNNNRTG	3 cut(s)	312, 880, 1914
MspA1I	CMGCKG	2 cut(s)	1789, 2113
MspI	CCGG	3 cut(s)	15, 1845, 2050
MspR9I	CCNGG	4 cut(s)	16, 249, 1434, 1845
Mva1269I	GAATGC	3 cut(s)	887, 1189, 1583
MvaI	CCWGG	2 cut(s)	249, 1434
MvnI	CGCG	4 cut(s)	92, 94, 102, 137
MwoI	GCNNNNNNNGC	3 cut(s)	349, 1407, 1655
NciI	CCSGG	2 cut(s)	16, 1845
NcoI	CCATGG	1 cut(s)	313
NlaIV	GGNNCC	5 cut(s)	13, 246, 543, 971, 1762
NmeAIII	GCCGAG	1 cut(s)	1256
NmuCI	GTSAC	4 cut(s)	383, 822, 1934, 2106
NruI	TCGCGA	1 cut(s)	137
NsiI	ATGCAT	1 cut(s)	1398
NspI	RCATGY	3 cut(s)	1396, 1817, 1853
NspV	TTCGAA	1 cut(s)	2062
PaeI	GCATGC	1 cut(s)	1817
PaeR7I	CTCGAG	2 cut(s)	498, 2101
PagI	TCATGA	1 cut(s)	1549
PauI	GCGCGC	1 cut(s)	92
PceI	AGGCCT	1 cut(s)	504
PciSI	GCTCTTC	1 cut(s)	1632
PcsI	WCGNNNNNNNCGW	1 cut(s)	119
PctI	GAATGC	3 cut(s)	887, 1189, 1583
PdmI	GAANNNNTTC	1 cut(s)	1545
PfeI	GAWTC	5 cut(s)	421, 848, 950, 1205, 1783
PfoI	TCCNGGA	2 cut(s)	14, 1432
PinAI	ACCGGT	1 cut(s)	2049
PleI	GAGTC	2 cut(s)	1329, 1683
PpsI	GAGTC	2 cut(s)	1329, 1683
Ppu21I	YACGTR	1 cut(s)	1091
PpuMI	RGGWCCY	2 cut(s)	993, 1760
PshAI	GACNNNNGTC	1 cut(s)	741
Psp5II	RGGWCCY	2 cut(s)	993, 1760
Psp6I	CCWGG	2 cut(s)	247, 1432
PspGI	CCWGG	2 cut(s)	247, 1432
PspN4I	GGNNCC	5 cut(s)	13, 246, 543, 971, 1762
PspPI	GGNCC	6 cut(s)	12, 959, 993, 1250, 1698, 1760
PspPPI	RGGWCCY	2 cut(s)	993, 1760
PspXI	VCTCGAGB	2 cut(s)	498, 2101
PsrI	GAACNNNNNNTAC	2 cut(s)	622, 654
PsuI	RGATCY	4 cut(s)	406, 485, 583, 1160
PteI	GCGCGC	1 cut(s)	92
RruI	TCGCGA	1 cut(s)	137
RsaI	GTAC	2 cut(s)	324, 1070
RsaNI	GTAC	2 cut(s)	323, 1069
RseI	CAYNNNNRTG	3 cut(s)	312, 880, 1914
SapI	GCTCTTC	1 cut(s)	1632
SaqAI	TTAA	7 cut(s)	126, 173, 204, 798, 1337, 1749, 2082
Sau96I	GGNCC	6 cut(s)	12, 959, 993, 1250, 1698, 1760
SchI	GAGTC	2 cut(s)	1330, 1684
ScrFI	CCNGG	4 cut(s)	16, 249, 1434, 1845
SduI	GDGCHC	6 cut(s)	345, 974, 1170, 1357, 1845, 2150
SfaNI	GCATC	6 cut(s)	562, 1061, 1456, 1582, 1848, 1855
SfcI	CTRYAG	1 cut(s)	1123
Sfr274I	CTCGAG	2 cut(s)	498, 2101
SfuI	TTCGAA	1 cut(s)	2062
SinI	GGWCC	5 cut(s)	12, 993, 1250, 1698, 1760
SlaI	CTCGAG	2 cut(s)	498, 2101
SmiMI	CAYNNNNRTG	3 cut(s)	312, 880, 1914
SmlI	CTYRAG	5 cut(s)	410, 498, 915, 1755, 2101
SmoI	CTYRAG	5 cut(s)	410, 498, 915, 1755, 2101
SphI	GCATGC	1 cut(s)	1817
SseBI	AGGCCT	1 cut(s)	504
SsiI	CCGC	7 cut(s)	100, 145, 760, 1789, 1950, 2024, 2113
SspI	AATATT	2 cut(s)	217, 1881
SspMI	CTAG	6 cut(s)	359, 1104, 1281, 1445, 1577, 1994
StuI	AGGCCT	1 cut(s)	504
StyD4I	CCNGG	4 cut(s)	14, 247, 1432, 1843
StyI	CCWWGG	1 cut(s)	313
TaaI	ACNGT	2 cut(s)	660, 2145
TaiI	ACGT	1 cut(s)	1093
TaqI	TCGA	8 cut(s)	499, 833, 1026, 1189, 1224, 1330, 2062, 2102
TatI	WGTACW	1 cut(s)	1068
TauI	GCSGC	3 cut(s)	148, 762, 1952
TfiI	GAWTC	5 cut(s)	421, 848, 950, 1205, 1783
Tru1I	TTAA	7 cut(s)	126, 173, 204, 798, 1337, 1749, 2082
Tru9I	TTAA	7 cut(s)	126, 173, 204, 798, 1337, 1749, 2082
TscAI	CASTG	8 cut(s)	961, 1087, 1185, 1215, 1496, 1959, 2050, 2150
TseFI	GTSAC	4 cut(s)	383, 822, 1934, 2106
TseI	GCWGC	7 cut(s)	352, 355, 1376, 1379, 1477, 1516, 1649
Tsp45I	GTSAC	4 cut(s)	383, 822, 1934, 2106
TspDTI	ATGAA	9 cut(s)	178, 337, 692, 1016, 1500, 1538, 1566, 1619, 1938
TspGWI	ACGGA	3 cut(s)	128, 1029, 1469
TspRI	CASTG	8 cut(s)	961, 1087, 1185, 1215, 1496, 1959, 2050, 2150
VneI	GTGCAC	1 cut(s)	1166
VpaK11BI	GGWCC	5 cut(s)	12, 993, 1250, 1698, 1760
XagI	CCTNNNNNAGG	1 cut(s)	982
XapI	RAATTY	3 cut(s)	1003, 1099, 1793
XbaI	TCTAGA	1 cut(s)	1576
XceI	RCATGY	3 cut(s)	1396, 1817, 1853
XhoI	CTCGAG	2 cut(s)	498, 2101
XmiI	GTMKAC	2 cut(s)	928, 2077
XmnI	GAANNNNTTC	1 cut(s)	1545
XspI	CTAG	6 cut(s)	359, 1104, 1281, 1445, 1577, 1994
Zsp2I	ATGCAT	1 cut(s)	1398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.