Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0002672

Physical Location & Seq

Genomic Coordinates Forward (+)

22443360 .. 22449694

Gene Structure 6335 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1136900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGCTCAGGCGTCCGAGAGGGGGAGGGTCGTCGGGGATTATCTGGTGGGTCAGCAAATTGGGTCGGGTTCGTTCTCGGTGGTTTGGCACGCGCGCCACCGCGTCCACGGGACGGAGGTGGCGATTAAGGAGATCGCGACGGGGCGGCTGAACAAGAAGTTGCAGGAGAGTTTAATGTCGGAGATTTTCATTCTGAAGAAGATTAACCACCCGAATATTATTCGGTTGCACGATATTATAGAGGTTCCTGGGAAGATAAATCTTGTTTTAGAGTATTGCAGAGGTGGTGATCTTTCTATGTATATACAACGCCATGGAAAAGTGCCCGAAGCTCTTGCAGAGCACTTCATGCAGCAGCTAGTCGCTGGTCTGCAAATGCTTCGTGACAACAATCTTATACATCGGGATCTCAAGCCACAGAATCTCTTGCTGTCCACCAATGACAACAATTCTGTCTTGAAGATTGCAGATTTTGGATTTGCAAGATATCTGCAACCTCAAGGCCTTGCTGAAACCTTGTGTGGTTCACCACTTTACATGGCTCCAGAGATAATGCAACTTCAAAAGTATGATGCAAAGGCAGATCTCTGGAGTGTTGGTGCAATTTTATTTCAACTCGTAACTGGGAGAACCCCATTTACAGGAAACAGTCAAATACAGTTGCTTCAGAACATAATGAAAGCAACTGAGTTGCAGTTCCCTTCAGATAGCAACAATTTGAGTTCAGAGTGCAAGGACTTGTGTCAGAAATTGTTACGCCGCAATCGATTGGAACGCCTAACATTTGAAGAGTTTTTTAACCACCCATTTCTATCTCAGCAGTCATCATATTCGAGGAGTAGGAGGGAATCACGAATGGCGGAGGGATTTCCTACATCTGAATGCAATGCAATGAGGAACATGGAGGAAAGTTCTCAAGAAGATTGTCTACCTTTCCATTTAGATGATGATTCCAGTGGCCCTGAGGGGAGCCCATCCTGTTCAAGGAGGAGGTCCTCGATGAAGTCCACTTACGGATTTTCTCTCGATACAAAAGGTGATAGACAGGAAGCATCACCTACCACTTTGTACAGATATGGCAGTGCAACACGTAAAGAAAATTCTAGTCTTAGGTTGGACGGCCATAGATCGTCAGATAGAAATCCAACTGACCCTCTAAGATCTGTGCACAAAAAACCAGTGAATGCTCGATCAAGAGTTGTGGATTCACTGGAGTTGATCGATCAAGATTATGTTCTTGTGTCTGGACCTCCAGTTGATGTGTCTTCTTCCTCGGCTAGTGCTTCCAAACCAAGCCCTTCATTCTACAAATCTCAGAGTCTCCCTCGATCCTTTACCACCTCATCAAGTGCCCCAATGCCAATCATGGGTGTAGCAGCTAATAGTAACATGCATTGCATAGGAAGCTTAGATAGTCAGAGTTCTGCTCCAGGGACATCACTAGGATCAGCGGACATGGGAGATGCTTTGGAGCAGCCATCAACACACTGCATGACAAGGCTTAGTTCATTGCAGCAATGTGTGTCTGCTATTACTGAATTAGTTCATGAAAAGACTGAGGCAAGGAAGCATCCAGAAGCATTCTCAATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCTCTTCATATATGCCATACGCAGGCTGCCTCAGCTATGGAAGGAAGTCCGAGTCAAGAGACTGCAAGATTTAGGACCACCAGCAAGAAGCAAAGTAGTCCTGATATGGACGAAAGCCTTGATGTTAACACTCAAGGACCTGAAGATATTTCTTCTGAGATTGAGCGGGAATTTCTCCGAGAGGTTGAGCATGCAGAAGAACTTGCAAAGGCTATTGAACCTGGACATGCAGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCTCTTGTTTTTGGGAGACATGGGGGTGTCGATGAACTCATGGGTGACATGGAAAGTGCTGCAGTGTTTTATACAAAAGCTGTGCGTCTCCTGGTCTTTCTTCTAGTGGAAGCACCATCCCTCATTCTCAACCCGCCCTTTTCCCTGACAAACTCTGACCGGTATAGGCTTCAAACTTACATTGGTATACTTAATAATAGGCAAGGTTACTCGAGGTCACAGCGGATGGCGATTTTGAAATGTGAGGAGCAACAGTGCCCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008219 GO:0009405 GO:0009847 GO:0009987 GO:0012501 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044409 GO:0044419 GO:0048102 GO:0051701 GO:0051704 GO:0051828 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04139 ko04140 ko04150 ko04212 map04136 map04138 map04139 map04140 map04150 map04212

Pfam Domains

Protein Families

Pkinase

Protein Analysis

718

Amino Acids

79.77

Weight (kDa)

6.19

Isoelectric Point (pI)

66.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	14 - 271	1.2e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	17 - 265	2.6e-43	Protein tyrosine and serine/threonine kinase
MIT_ATG1	PF24497	482 - 613	5.6e-55	ATG1, MIT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37840 AT2G37840 AT2G37840 AT3G53930 AT3G53930 AT3G53930 AT3G53930 AT3G53930
fragaria_vesca	FvH4_6g12940 FvH4_6g12940 FvH4_6g12940 FvH4_6g12940 FvH4_6g12940
malus_domestica	MD04G1136900.v1.1 MD08G1035900.v1.1 MD12G1151100.v1.1
prunus_persica	Prupe.6G262900_v2.0.a1 Prupe.6G262900_v2.0.a1 Prupe.6G262900_v2.0.a1
pyrus_communis	pycom04g12420 pycom12g14500 pycom12g14540
rosa_chinensis	RchiOBHm_Chr3g0465041 RchiOBHm_Chr6g0290621
rosa_laevigata	RLG00000024660
rosa_multiflora	Rmu_sc0002119.1_g000016 Rmu_sc0003072.1_g000002 Rmu_sc0004362.1_g000019 Rmu_sc0006588.1_g000005
rosa_roxburghii	Rroxscaffold_6G00415320
rosa_rugosa	Rorug03G0074800 Rorug03G0074800
rosa_samantha	Rh3BG138400 Rh3CG140800 Rh3CG149100 Rh3DG139900 Rh4CG187800 Rh5CG080500
rosa_wichuraiana	Rw3G011320 Rw5G006690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1786
AccI	GTMKAC	2 cut(s)	928, 2074
AccII	CGCG	4 cut(s)	92, 94, 102, 137
AciI	CCGC	8 cut(s)	100, 145, 760, 860, 1451, 1786, 2021, 2110
AclWI	GGATC	3 cut(s)	414, 1323, 1453
AcoI	YGGCCR	1 cut(s)	1120
AcsI	RAATTY	2 cut(s)	1099, 1790
AcuI	CTGAAG	4 cut(s)	215, 650, 687, 1782
AcyI	GRCGYC	1 cut(s)	11
AfaI	GTAC	1 cut(s)	1070
AfiI	CCNNNNNNNGG	6 cut(s)	21, 112, 641, 984, 1367, 1642
AflIII	ACRYGT	1 cut(s)	1088
AgeI	ACCGGT	1 cut(s)	2046
AgsI	TTSAA	9 cut(s)	460, 563, 614, 788, 984, 1838, 1883, 2060, 2125
AjnI	CCWGG	4 cut(s)	247, 1429, 1840, 1977
AluBI	AGCT	8 cut(s)	332, 358, 1379, 1407, 1594, 1622, 1655, 1967
AluI	AGCT	8 cut(s)	332, 358, 1379, 1407, 1594, 1622, 1655, 1967
Alw21I	GWGCWC	2 cut(s)	345, 1170
Alw26I	GTCTC	5 cut(s)	1325, 1673, 1865, 1897, 1979
Alw44I	GTGCAC	1 cut(s)	1166
AlwI	GGATC	3 cut(s)	414, 1323, 1453
Ama87I	CYCGRG	1 cut(s)	2098
AoxI	GGCC	3 cut(s)	502, 958, 1120
ApaLI	GTGCAC	1 cut(s)	1166
ApeKI	GCWGC	7 cut(s)	352, 355, 1376, 1474, 1513, 1646, 1946
ApoI	RAATTY	2 cut(s)	1099, 1790
AsiGI	ACCGGT	1 cut(s)	2046
Asp700I	GAANNNNTTC	1 cut(s)	1542
AspLEI	GCGC	2 cut(s)	94, 96
AspS9I	GGNCC	5 cut(s)	959, 993, 1247, 1695, 1757
AsuHPI	GGTGA	5 cut(s)	299, 519, 1047, 1049, 1943
AvaI	CYCGRG	1 cut(s)	2098
AvaII	GGWCC	4 cut(s)	993, 1247, 1695, 1757
AxyI	CCTNAGG	1 cut(s)	963
BaeGI	GKGCMC	4 cut(s)	327, 1170, 1354, 2147
BanII	GRGCYC	1 cut(s)	974
BarI	GAAGNNNNNNTAC	4 cut(s)	912, 944, 995, 1027
BbsI	GAAGAC	1 cut(s)	1257
Bbv12I	GWGCWC	2 cut(s)	345, 1170
BbvCI	CCTCAGC	1 cut(s)	1651
BbvI	GCAGC	7 cut(s)	364, 367, 1388, 1486, 1525, 1633, 1933
BccI	CCATC	4 cut(s)	982, 1486, 2011, 2107
BceAI	ACGGC	1 cut(s)	1135
BcgI	CGANNNNNNTGC	4 cut(s)	317, 351, 362, 396
BciT130I	CCWGG	4 cut(s)	249, 1431, 1842, 1979
BcoDI	GTCTC	5 cut(s)	1325, 1673, 1865, 1897, 1979
BfaI	CTAG	5 cut(s)	359, 1104, 1278, 1442, 1991
BfmI	CTRYAG	1 cut(s)	1947
BglII	AGATCT	2 cut(s)	583, 1160
BisI	GCNGC	9 cut(s)	146, 353, 356, 760, 1377, 1475, 1514, 1647, 1947
BlsI	GCNGC	9 cut(s)	147, 354, 357, 761, 1378, 1476, 1515, 1648, 1948
Bme1390I	CCNGG	4 cut(s)	249, 1431, 1842, 1979
Bme18I	GGWCC	4 cut(s)	993, 1247, 1695, 1757
BmeT110I	CYCGRG	1 cut(s)	2098
BmgT120I	GGNCC	5 cut(s)	959, 993, 1247, 1695, 1757
BmiI	GGNNCC	3 cut(s)	246, 543, 971
BmrFI	CCNGG	4 cut(s)	249, 1431, 1842, 1979
BmrI	ACTGGG	1 cut(s)	633
BmsI	GCATC	6 cut(s)	562, 1061, 1453, 1579, 1845, 1852
BmuI	ACTGGG	1 cut(s)	633
BoxI	GACNNNNGTC	1 cut(s)	741
BpiI	GAAGAC	1 cut(s)	1257
BplI	GAGNNNNNCTC	4 cut(s)	1309, 1341, 1411, 1443
BpmI	CTGGAG	5 cut(s)	528, 610, 1232, 1236, 1413
Bpu10I	CCTNAGC	2 cut(s)	6, 1651
BpuEI	CTTGAG	4 cut(s)	395, 483, 900, 1737
Bsa29I	ATCGAT	2 cut(s)	766, 1221
BsaAI	YACGTR	1 cut(s)	1091
BsaBI	GATNNNNATC	1 cut(s)	1140
BsaHI	GRCGYC	1 cut(s)	11
BsaJI	CCNNGG	5 cut(s)	106, 248, 313, 1272, 1430
BsaWI	WCCGGW	1 cut(s)	2046
BsaXI	ACNNNNNCTCC	3 cut(s)	583, 613, 2126
Bsc4I	CCNNNNNNNGG	6 cut(s)	21, 112, 641, 984, 1367, 1642
Bse118I	RCCGGY	1 cut(s)	2046
Bse1I	ACTGG	5 cut(s)	628, 954, 1178, 1215, 1253
Bse21I	CCTNAGG	1 cut(s)	963
Bse3DI	GCAATG	6 cut(s)	892, 897, 1393, 1508, 1523, 1872
Bse8I	GATNNNNATC	1 cut(s)	1140
BseBI	CCWGG	4 cut(s)	249, 1431, 1842, 1979
BseCI	ATCGAT	2 cut(s)	766, 1221
BseDI	CCNNGG	5 cut(s)	106, 248, 313, 1272, 1430
BseGI	GGATG	4 cut(s)	974, 1570, 2003, 2118
BseJI	GATNNNNATC	1 cut(s)	1140
BseLI	CCNNNNNNNGG	6 cut(s)	21, 112, 641, 984, 1367, 1642
BseMI	GCAATG	6 cut(s)	892, 897, 1393, 1508, 1523, 1872
BseMII	CTCAG	8 cut(s)	20, 678, 830, 954, 1328, 1548, 1665, 1767
BseNI	ACTGG	5 cut(s)	628, 954, 1178, 1215, 1253
BsePI	GCGCGC	1 cut(s)	92
BseRI	GAGGAG	3 cut(s)	850, 1003, 2147
BseSI	GKGCMC	4 cut(s)	327, 1170, 1354, 2147
BseXI	GCAGC	7 cut(s)	364, 367, 1388, 1486, 1525, 1633, 1933
Bsh1236I	CGCG	4 cut(s)	92, 94, 102, 137
BshFI	GGCC	3 cut(s)	504, 960, 1122
BshTI	ACCGGT	1 cut(s)	2046
BshVI	ATCGAT	2 cut(s)	766, 1221
BsiHKAI	GWGCWC	2 cut(s)	345, 1170
BsiHKCI	CYCGRG	1 cut(s)	2098
BsiSI	CCGG	1 cut(s)	2047
BslFI	GGGAC	2 cut(s)	124, 1447
BslI	CCNNNNNNNGG	6 cut(s)	21, 112, 641, 984, 1367, 1642
BsmAI	GTCTC	5 cut(s)	1325, 1673, 1865, 1897, 1979
BsmBI	CGTCTC	1 cut(s)	1979
BsmFI	GGGAC	2 cut(s)	124, 1447
BsmI	GAATGC	3 cut(s)	887, 1189, 1580
BsnI	GGCC	3 cut(s)	504, 960, 1122
BsoBI	CYCGRG	1 cut(s)	2098
Bsp1286I	GDGCHC	6 cut(s)	327, 345, 974, 1170, 1354, 2147
Bsp1407I	TGTACA	1 cut(s)	1068
Bsp19I	CCATGG	1 cut(s)	313
Bsp68I	TCGCGA	1 cut(s)	137
BspACI	CCGC	8 cut(s)	100, 145, 760, 860, 1451, 1786, 2021, 2110
BspANI	GGCC	3 cut(s)	504, 960, 1122
BspCNI	CTCAG	8 cut(s)	19, 679, 829, 955, 1327, 1549, 1664, 1768
BspDI	ATCGAT	2 cut(s)	766, 1221
BspFNI	CGCG	4 cut(s)	92, 94, 102, 137
BspHI	TCATGA	1 cut(s)	1546
BspLI	GGNNCC	3 cut(s)	246, 543, 971
BspMAI	CTGCAG	1 cut(s)	1951
BspPI	GGATC	3 cut(s)	414, 1323, 1453
BspQI	GCTCTTC	1 cut(s)	1629
BsrBI	CCGCTC	1 cut(s)	1786
BsrDI	GCAATG	6 cut(s)	892, 897, 1393, 1508, 1523, 1872
BsrFI	RCCGGY	1 cut(s)	2046
BsrGI	TGTACA	1 cut(s)	1068
BsrI	ACTGG	5 cut(s)	628, 954, 1178, 1215, 1253
BssAI	RCCGGY	1 cut(s)	2046
BssECI	CCNNGG	5 cut(s)	106, 248, 313, 1272, 1430
BssHII	GCGCGC	1 cut(s)	92
BssNAI	GTATAC	1 cut(s)	2075
BssNI	GRCGYC	1 cut(s)	11
BssT1I	CCWWGG	1 cut(s)	313
Bst1107I	GTATAC	1 cut(s)	2075
Bst2UI	CCWGG	4 cut(s)	249, 1431, 1842, 1979
Bst4CI	ACNGT	3 cut(s)	650, 660, 2142
Bst6I	CTCTTC	2 cut(s)	783, 1629
BstACI	GRCGYC	1 cut(s)	11
BstAPI	GCANNNNNTGC	1 cut(s)	349
BstAUI	TGTACA	1 cut(s)	1068
BstBAI	YACGTR	1 cut(s)	1091
BstC8I	GCNNGC	5 cut(s)	90, 94, 1620, 1644, 1812
BstDSI	CCRYGG	2 cut(s)	106, 313
BstENI	CCTNNNNNAGG	1 cut(s)	982
BstF5I	GGATG	4 cut(s)	974, 1570, 2003, 2118
BstFNI	CGCG	4 cut(s)	92, 94, 102, 137
BstHHI	GCGC	2 cut(s)	94, 96
BstMAI	GTCTC	5 cut(s)	1325, 1673, 1865, 1897, 1979
BstMWI	GCNNNNNNNGC	3 cut(s)	349, 1404, 1652
BstNI	CCWGG	4 cut(s)	249, 1431, 1842, 1979
BstNSI	RCATGY	3 cut(s)	1393, 1814, 1850
BstPAI	GACNNNNGTC	1 cut(s)	741
BstSCI	CCNGG	4 cut(s)	247, 1429, 1840, 1977
BstSFI	CTRYAG	1 cut(s)	1947
BstSLI	GKGCMC	4 cut(s)	327, 1170, 1354, 2147
BstUI	CGCG	4 cut(s)	92, 94, 102, 137
BstV1I	GCAGC	7 cut(s)	364, 367, 1388, 1486, 1525, 1633, 1933
BstV2I	GAAGAC	1 cut(s)	1257
BstX2I	RGATCY	3 cut(s)	406, 583, 1160
BstYI	RGATCY	3 cut(s)	406, 583, 1160
BstZ17I	GTATAC	1 cut(s)	2075
Bsu15I	ATCGAT	2 cut(s)	766, 1221
Bsu36I	CCTNAGG	1 cut(s)	963
BsuRI	GGCC	3 cut(s)	504, 960, 1122
BsuTUI	ATCGAT	2 cut(s)	766, 1221
BtgI	CCRYGG	2 cut(s)	106, 313
BtsCI	GGATG	4 cut(s)	974, 1570, 2003, 2118
BtsI	GCAGTG	3 cut(s)	1087, 1486, 1956
BtsIMutI	CAGTG	7 cut(s)	961, 1087, 1185, 1208, 1486, 1956, 2147
BtuMI	TCGCGA	1 cut(s)	137
Cac8I	GCNNGC	5 cut(s)	90, 94, 1620, 1644, 1812
CciI	TCATGA	1 cut(s)	1546
CfoI	GCGC	2 cut(s)	94, 96
Cfr10I	RCCGGY	1 cut(s)	2046
Cfr13I	GGNCC	5 cut(s)	959, 993, 1247, 1695, 1757
ClaI	ATCGAT	2 cut(s)	766, 1221
CseI	GACGC	2 cut(s)	91, 1961
Csp6I	GTAC	1 cut(s)	1069
CspAI	ACCGGT	1 cut(s)	2046
CspCI	CAANNNNNGTGG	2 cut(s)	1182, 1217
CviQI	GTAC	1 cut(s)	1069
EaeI	YGGCCR	1 cut(s)	1120
Eam1104I	CTCTTC	2 cut(s)	783, 1629
EarI	CTCTTC	2 cut(s)	783, 1629
EciI	GGCGGA	1 cut(s)	875
Eco130I	CCWWGG	1 cut(s)	313
Eco147I	AGGCCT	1 cut(s)	504
Eco24I	GRGCYC	1 cut(s)	974
Eco32I	GATATC	1 cut(s)	488
Eco47I	GGWCC	4 cut(s)	993, 1247, 1695, 1757
Eco57I	CTGAAG	4 cut(s)	215, 650, 687, 1782
Eco81I	CCTNAGG	1 cut(s)	963
Eco88I	CYCGRG	1 cut(s)	2098
EcoNI	CCTNNNNNAGG	1 cut(s)	982
EcoO109I	RGGNCCY	2 cut(s)	993, 1757
EcoRII	CCWGG	4 cut(s)	247, 1429, 1840, 1977
EcoRV	GATATC	1 cut(s)	488
EcoT14I	CCWWGG	1 cut(s)	313
EcoT22I	ATGCAT	1 cut(s)	1395
EcoT38I	GRGCYC	1 cut(s)	974
ErhI	CCWWGG	1 cut(s)	313
Esp3I	CGTCTC	1 cut(s)	1979
FaqI	GGGAC	2 cut(s)	124, 1447
FauI	CCCGC	2 cut(s)	1779, 2028
FblI	GTMKAC	2 cut(s)	928, 2074
Fnu4HI	GCNGC	9 cut(s)	146, 353, 356, 760, 1377, 1475, 1514, 1647, 1947
FokI	GGATG	4 cut(s)	961, 1557, 1990, 2125
FriOI	GRGCYC	1 cut(s)	974
Fsp4HI	GCNGC	9 cut(s)	146, 353, 356, 760, 1377, 1475, 1514, 1647, 1947
FspBI	CTAG	5 cut(s)	359, 1104, 1278, 1442, 1991
GlaI	GCGC	2 cut(s)	93, 95
GluI	GCNGC	9 cut(s)	146, 353, 356, 760, 1377, 1475, 1514, 1647, 1947
GsuI	CTGGAG	5 cut(s)	528, 610, 1232, 1236, 1413
HaeIII	GGCC	3 cut(s)	504, 960, 1122
HapII	CCGG	1 cut(s)	2047
HgaI	GACGC	2 cut(s)	91, 1961
HhaI	GCGC	2 cut(s)	94, 96
Hin1I	GRCGYC	1 cut(s)	11
Hin6I	GCGC	2 cut(s)	92, 94
HinP1I	GCGC	2 cut(s)	92, 94
HincII	GTYRAC	1 cut(s)	1747
HindII	GTYRAC	1 cut(s)	1747
HindIII	AAGCTT	1 cut(s)	1405
HinfI	GANTC	6 cut(s)	421, 848, 950, 1205, 1318, 1672
HpaI	GTTAAC	1 cut(s)	1747
HpaII	CCGG	1 cut(s)	2047
HphI	GGTGA	5 cut(s)	299, 519, 1047, 1049, 1943
Hpy166II	GTNNAC	8 cut(s)	106, 435, 527, 929, 1008, 1168, 1747, 2075
Hpy8I	GTNNAC	8 cut(s)	106, 435, 527, 929, 1008, 1168, 1747, 2075
Hpy99I	CGWCG	2 cut(s)	35, 142
HpyAV	CCTTC	3 cut(s)	711, 1308, 1655
HpyCH4III	ACNGT	3 cut(s)	650, 660, 2142
HpyCH4IV	ACGT	1 cut(s)	1090
HpyF10VI	GCNNNNNNNGC	3 cut(s)	349, 1404, 1652
HpySE526I	ACGT	1 cut(s)	1090
Hsp92I	GRCGYC	1 cut(s)	11
HspAI	GCGC	2 cut(s)	92, 94
KspAI	GTTAAC	1 cut(s)	1747
LguI	GCTCTTC	1 cut(s)	1629
LmnI	GCTCC	5 cut(s)	547, 969, 1432, 1471, 2134
Lsp1109I	GCAGC	7 cut(s)	364, 367, 1388, 1486, 1525, 1633, 1933
LweI	GCATC	6 cut(s)	562, 1061, 1453, 1579, 1845, 1852
MaeI	CTAG	5 cut(s)	359, 1104, 1278, 1442, 1991
MaeII	ACGT	1 cut(s)	1090
MaeIII	GTNAC	7 cut(s)	383, 619, 753, 1385, 1931, 2093, 2103
MbiI	CCGCTC	1 cut(s)	1786
MflI	RGATCY	3 cut(s)	406, 583, 1160
MhlI	GDGCHC	6 cut(s)	327, 345, 974, 1170, 1354, 2147
MlyI	GAGTC	2 cut(s)	1327, 1681
MmeI	TCCRAC	3 cut(s)	159, 1095, 1169
Mph1103I	ATGCAT	1 cut(s)	1395
MroXI	GAANNNNTTC	1 cut(s)	1542
MseI	TTAA	6 cut(s)	126, 173, 204, 798, 1746, 2079
MslI	CAYNNNNRTG	3 cut(s)	880, 942, 1911
MspA1I	CMGCKG	2 cut(s)	1451, 2110
MspI	CCGG	1 cut(s)	2047
MspR9I	CCNGG	4 cut(s)	249, 1431, 1842, 1979
Mva1269I	GAATGC	3 cut(s)	887, 1189, 1580
MvaI	CCWGG	4 cut(s)	249, 1431, 1842, 1979
MvnI	CGCG	4 cut(s)	92, 94, 102, 137
MwoI	GCNNNNNNNGC	3 cut(s)	349, 1404, 1652
NcoI	CCATGG	1 cut(s)	313
NlaIV	GGNNCC	3 cut(s)	246, 543, 971
NmeAIII	GCCGAG	1 cut(s)	1253
NmuCI	GTSAC	3 cut(s)	383, 1931, 2103
NruI	TCGCGA	1 cut(s)	137
NsiI	ATGCAT	1 cut(s)	1395
NspI	RCATGY	3 cut(s)	1393, 1814, 1850
PaeI	GCATGC	1 cut(s)	1814
PaeR7I	CTCGAG	1 cut(s)	2098
PagI	TCATGA	1 cut(s)	1546
PauI	GCGCGC	1 cut(s)	92
PceI	AGGCCT	1 cut(s)	504
PciSI	GCTCTTC	1 cut(s)	1629
PcsI	WCGNNNNNNNCGW	2 cut(s)	119, 763
PctI	GAATGC	3 cut(s)	887, 1189, 1580
PdmI	GAANNNNTTC	1 cut(s)	1542
PfeI	GAWTC	4 cut(s)	421, 848, 950, 1205
PinAI	ACCGGT	1 cut(s)	2046
PkrI	GCNGC	9 cut(s)	147, 354, 357, 761, 1378, 1476, 1515, 1648, 1948
PleI	GAGTC	2 cut(s)	1326, 1680
PpsI	GAGTC	2 cut(s)	1326, 1680
Ppu21I	YACGTR	1 cut(s)	1091
PpuMI	RGGWCCY	2 cut(s)	993, 1757
PshAI	GACNNNNGTC	1 cut(s)	741
Psp5II	RGGWCCY	2 cut(s)	993, 1757
Psp6I	CCWGG	4 cut(s)	247, 1429, 1840, 1977
PspGI	CCWGG	4 cut(s)	247, 1429, 1840, 1977
PspN4I	GGNNCC	3 cut(s)	246, 543, 971
PspPI	GGNCC	5 cut(s)	959, 993, 1247, 1695, 1757
PspPPI	RGGWCCY	2 cut(s)	993, 1757
PspXI	VCTCGAGB	1 cut(s)	2098
PsrI	GAACNNNNNNTAC	2 cut(s)	622, 654
PstI	CTGCAG	1 cut(s)	1951
PsuI	RGATCY	3 cut(s)	406, 583, 1160
PteI	GCGCGC	1 cut(s)	92
RruI	TCGCGA	1 cut(s)	137
RsaI	GTAC	1 cut(s)	1070
RsaNI	GTAC	1 cut(s)	1069
RseI	CAYNNNNRTG	3 cut(s)	880, 942, 1911
SapI	GCTCTTC	1 cut(s)	1629
SaqAI	TTAA	6 cut(s)	126, 173, 204, 798, 1746, 2079
SatI	GCNGC	9 cut(s)	146, 353, 356, 760, 1377, 1475, 1514, 1647, 1947
Sau96I	GGNCC	5 cut(s)	959, 993, 1247, 1695, 1757
SchI	GAGTC	2 cut(s)	1327, 1681
ScrFI	CCNGG	4 cut(s)	249, 1431, 1842, 1979
SduI	GDGCHC	6 cut(s)	327, 345, 974, 1170, 1354, 2147
SfaNI	GCATC	6 cut(s)	562, 1061, 1453, 1579, 1845, 1852
SfcI	CTRYAG	1 cut(s)	1947
Sfr274I	CTCGAG	1 cut(s)	2098
SinI	GGWCC	4 cut(s)	993, 1247, 1695, 1757
SlaI	CTCGAG	1 cut(s)	2098
SmiMI	CAYNNNNRTG	3 cut(s)	880, 942, 1911
SmlI	CTYRAG	5 cut(s)	410, 498, 915, 1752, 2098
SmoI	CTYRAG	5 cut(s)	410, 498, 915, 1752, 2098
SphI	GCATGC	1 cut(s)	1814
SseBI	AGGCCT	1 cut(s)	504
SsiI	CCGC	8 cut(s)	100, 145, 760, 860, 1451, 1786, 2021, 2110
SspI	AATATT	2 cut(s)	217, 1878
SspMI	CTAG	5 cut(s)	359, 1104, 1278, 1442, 1991
StuI	AGGCCT	1 cut(s)	504
StyD4I	CCNGG	4 cut(s)	247, 1429, 1840, 1977
StyI	CCWWGG	1 cut(s)	313
TaaI	ACNGT	3 cut(s)	650, 660, 2142
TaiI	ACGT	1 cut(s)	1093
TaqI	TCGA	9 cut(s)	766, 833, 998, 1026, 1189, 1221, 1327, 1917, 2099
TatI	WGTACW	1 cut(s)	1068
TauI	GCSGC	2 cut(s)	148, 762
TfiI	GAWTC	4 cut(s)	421, 848, 950, 1205
Tru1I	TTAA	6 cut(s)	126, 173, 204, 798, 1746, 2079
Tru9I	TTAA	6 cut(s)	126, 173, 204, 798, 1746, 2079
TscAI	CASTG	7 cut(s)	961, 1087, 1185, 1215, 1493, 1956, 2147
TseFI	GTSAC	3 cut(s)	383, 1931, 2103
TseI	GCWGC	7 cut(s)	352, 355, 1376, 1474, 1513, 1646, 1946
Tsp45I	GTSAC	3 cut(s)	383, 1931, 2103
TspGWI	ACGGA	2 cut(s)	128, 1029
TspRI	CASTG	7 cut(s)	961, 1087, 1185, 1215, 1493, 1956, 2147
VneI	GTGCAC	1 cut(s)	1166
VpaK11BI	GGWCC	4 cut(s)	993, 1247, 1695, 1757
XagI	CCTNNNNNAGG	1 cut(s)	982
XapI	RAATTY	2 cut(s)	1099, 1790
XceI	RCATGY	3 cut(s)	1393, 1814, 1850
XhoI	CTCGAG	1 cut(s)	2098
XmiI	GTMKAC	2 cut(s)	928, 2074
XmnI	GAANNNNTTC	1 cut(s)	1542
XspI	CTAG	5 cut(s)	359, 1104, 1278, 1442, 1991
Zsp2I	ATGCAT	1 cut(s)	1395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.