Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002672

Physical Location & Seq

Genomic Coordinates Forward (+)

37523514 .. 37529937

Gene Structure 6424 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00415320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGGCTCAGGGGTCCGGGAGGGGAGGACGGGTCGTCGGGGACTACATAGTGGGCCGGCAAATCGGGTCGGGCTCGTTCTCGGTGGTCTGGCACGCGCGGCACCGCGCCCATGGGACCGAGGTGGCGATCAAGGAGATCGCGACGGGCCGGCTCAACAAGAAGTTGCAGGAGAGTTTAATGTCGGAGATCTTCATATTGAAGAAGATTAACCATCCCAATATTATTCGGTTGCATGATATAATTGAGGTTCCTGGGAAGATAAATCTTGTACTGGAGTATTGCAGAGGAGGTGATCTTTCCATGTACATTCAACGCCATGGAAAAGTACCTGAAGCTCTTGCAAAGCACTTCATGCAACAGCTAGTGGCAGGTCTGCAAATGCTTCGCGACAATAATCTTATACATCGGGATCTAAAGCCACAGAATCTCTTGCTGTCCACCAATGACAACAATTCCGTTTTGAAGATTGCAGATTTTGGATTTGCAAGATCTCTGCAACCTCGCGGCCTTGCTGAAACTCTGTGTGGTTCACCGCTTTACATGGCTCCAGAGATAATGCAACTTCAAAAGTATGATGCAAAGGCAGATCTCTGGAGTGTTGGCGCAATTTTATTTCAGCTTGTGACCGGGAAAACCCCATTCACAGGAAACAATCAAATACAGTTGCTTCAGAACATTGTGAAATCAACTGAGTTGCAGTTTCCCTCAGATAACAACAATTTGAGTTCAGAATGCAAGGATTTATGTCAGAAATTGTTACGCCGCAATCCAGTGGAACGATTAACATTTGAAGAATTCTTTAATCACCCATATCTTGCTCAAAAGCCCCTAGAGAATTCATCAAGGAGTAGGAGGGGCTCACGGATGGGAGACAGATTTCCTATGTCTGATAGCAGTGCCATGAGGAACATGGAAGAAAGTTCTCAGGAGGATTGCATGCCTTTCCTTTTGGATGACGATTCTAGTGGTCCTGAGGGGAGCCCTTCTTTTTCAAGGAGGAGGCCCTCGATGAAGTCTACTTATGGATTTTCTCTTGATATGAAAGCTGATAGACGAGAAGCATCACCAAGCACTTCTTTCAGATATGGCAGTGCCACACGTAAAGAAAATTCTACTCTTAGGTTTGACAGCCATAGACCAGCTGGAAATCTATATGACCATCTAGGATCCATAGACCAAAAATCAGTGAATGCTCGTTCAAGAGCACTTGGGGATTCAATGGAGTTGATTGATCAAGATTATGTACTTGTCTCTGGACCTCCTATTGATGTGTCTTCTACTTCAGCTAGTGCTTCAAAGCCAAGCCACTCATCATACAAATCTGAGAGTCTTCCGCAAGAATCTCTAACCACCTCGTCAAGTGCCCCAATGCCAATCATGGGTGCAGCTAGTAATAACACATGTTGCATAGGAAGCTTGGATAGTCAGTGTTCCGCTCCAGGGACATCACTAGGATCAACTGATATGGCTGATGCTTTGGAGCAGCCATCATCACACTGCATGACAAGGCTTAATTCGTTGCAGCAGTGTGTGTCTGCTATTACTGAATTAGTTCATGAAAAGATTGAGGCGGGCAAGCAACTTGAAGCATTCTCAATTCAGCTTGTAATTCTTGCTATTTGGAAGCAAGCACTTAACATATGCCACACACAAGCTGCCTCGGCAATGGAAGGAAGTCCAAGCCAAGAGACTACAAGAATTAGGAGGAGCACGAGCAAGAAGCATGGTAGTCCTGATACTGAGGAATGCCTTGAGGCCGTCAACTCTCAAGGGCCGGAAGATCTTTCTGCACAGATTGAGAGGGAATTTCTGCGGGAGGTTGAGCATGCAGAAGATCTAGCAAAGGCCATTGATCCTGGACATACAGAGATGCCAGATGCAATGGAGACAATATTTCAGTCTGCTCTAGTTTTCGGGAGACACGGGGTTGATGAGCTTATGGGTGACATGGATGGTGCAGCAGTATTTTATTCAAAAGCTGTGCGTCTCTTGGAATTTCTTCGTGTGGAAGCTCCATCCCTCATACTCAACCCACCATTTTCCCTGACCAGTTCCGACAGGTATAGACTTCGAACATACATTGATATACTCAAGAATAGGCAAGGTTATTCAAGTTCTCAGCGGATGGCTCTTTTGAAATGCGAGGAACAACAATGCCCTCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008219 GO:0009405 GO:0009847 GO:0009987 GO:0012501 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044409 GO:0044419 GO:0048102 GO:0051701 GO:0051704 GO:0051828 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04139 ko04140 ko04150 ko04212 map04136 map04138 map04139 map04140 map04150 map04212

Pfam Domains

Protein Families

Pkinase

Protein Analysis

721

Amino Acids

79.81

Weight (kDa)

6.29

Isoelectric Point (pI)

59.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	15 - 272	9.9e-76	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	18 - 266	2.5e-44	Protein tyrosine and serine/threonine kinase
MIT_ATG1	PF24497	485 - 617	8.8e-56	ATG1, MIT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37840 AT2G37840 AT2G37840 AT3G53930 AT3G53930 AT3G53930 AT3G53930 AT3G53930
fragaria_vesca	FvH4_6g12940 FvH4_6g12940 FvH4_6g12940 FvH4_6g12940 FvH4_6g12940
malus_domestica	MD04G1136900.v1.1 MD08G1035900.v1.1 MD12G1151100.v1.1
prunus_persica	Prupe.6G262900_v2.0.a1 Prupe.6G262900_v2.0.a1 Prupe.6G262900_v2.0.a1
pyrus_communis	pycom04g12420 pycom12g14500 pycom12g14540
rosa_chinensis	RchiOBHm_Chr3g0465041 RchiOBHm_Chr6g0290621
rosa_laevigata	RLG00000024660
rosa_multiflora	Rmu_sc0002119.1_g000016 Rmu_sc0003072.1_g000002 Rmu_sc0004362.1_g000019 Rmu_sc0006588.1_g000005
rosa_roxburghii	Rroxscaffold_6G00415320
rosa_rugosa	Rorug03G0074800 Rorug03G0074800
rosa_samantha	Rh3BG138400 Rh3CG140800 Rh3CG149100 Rh3DG139900 Rh4CG187800 Rh5CG080500
rosa_wichuraiana	Rw3G011320 Rw5G006690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	359
AccB1I	GGYRCC	1 cut(s)	99
AccBSI	CCGCTC	1 cut(s)	1436
AccI	GTMKAC	1 cut(s)	1016
AccII	CGCG	6 cut(s)	95, 97, 105, 140, 387, 504
AclWI	GGATC	5 cut(s)	417, 1161, 1174, 1462, 1847
AcsI	RAATTY	5 cut(s)	794, 835, 1108, 1805, 1994
AcuI	CTGAAG	3 cut(s)	351, 653, 1266
AfaI	GTAC	4 cut(s)	270, 305, 327, 1245
AfiI	CCNNNNNNNGG	3 cut(s)	644, 1379, 1440
AflIII	ACRYGT	2 cut(s)	1097, 1400
AhdI	GACNNNNNGTC	1 cut(s)	32
AjnI	CCWGG	3 cut(s)	250, 1438, 1855
Alw21I	GWGCWC	2 cut(s)	1207, 1712
Alw26I	GTCTC	6 cut(s)	864, 1255, 1682, 1880, 1912, 1991
AlwI	GGATC	5 cut(s)	417, 1161, 1174, 1462, 1847
AoxI	GGCC	7 cut(s)	52, 145, 505, 1001, 1755, 1772, 1845
ApeKI	GCWGC	5 cut(s)	1385, 1483, 1522, 1655, 1958
ApoI	RAATTY	5 cut(s)	794, 835, 1108, 1805, 1994
Asp700I	GAANNNNTTC	2 cut(s)	1551, 1998
AspLEI	GCGC	3 cut(s)	97, 107, 605
AspS9I	GGNCC	8 cut(s)	12, 52, 114, 145, 968, 1002, 1256, 1772
AsuC2I	CCSGG	2 cut(s)	16, 628
AsuHPI	GGTGA	5 cut(s)	302, 522, 797, 1056, 1955
AsuII	TTCGAA	1 cut(s)	2071
AvaII	GGWCC	4 cut(s)	12, 114, 968, 1256
AxyI	CCTNAGG	1 cut(s)	972
BaeGI	GKGCMC	1 cut(s)	1366
BamHI	GGATCC	1 cut(s)	1166
BanI	GGYRCC	1 cut(s)	99
BanII	GRGCYC	3 cut(s)	74, 860, 983
BauI	CACGAG	1 cut(s)	1711
BbsI	GAAGAC	2 cut(s)	1266, 1322
Bbv12I	GWGCWC	2 cut(s)	1207, 1712
BbvI	GCAGC	5 cut(s)	1397, 1495, 1534, 1642, 1970
BccI	CCATC	7 cut(s)	219, 859, 1167, 1495, 1946, 2023, 2119
BceAI	ACGGC	1 cut(s)	1742
BcgI	CGANNNNNNTGC	2 cut(s)	365, 399
BciT130I	CCWGG	3 cut(s)	252, 1440, 1857
BclI	TGATCA	1 cut(s)	1231
BcnI	CCSGG	2 cut(s)	16, 628
BcoDI	GTCTC	6 cut(s)	864, 1255, 1682, 1880, 1912, 1991
BfaI	CTAG	9 cut(s)	362, 830, 963, 1163, 1287, 1389, 1451, 1838, 1907
BfuAI	ACCTGC	1 cut(s)	359
BglII	AGATCT	5 cut(s)	186, 488, 586, 1780, 1834
BisI	GCNGC	8 cut(s)	98, 505, 763, 1386, 1484, 1523, 1656, 1959
BlsI	GCNGC	8 cut(s)	99, 506, 764, 1387, 1485, 1524, 1657, 1960
Bme1390I	CCNGG	5 cut(s)	16, 252, 628, 1440, 1857
Bme18I	GGWCC	4 cut(s)	12, 114, 968, 1256
BmeRI	GACNNNNNGTC	1 cut(s)	32
BmgT120I	GGNCC	8 cut(s)	12, 52, 114, 145, 968, 1002, 1256, 1772
BmiI	GGNNCC	7 cut(s)	13, 101, 115, 249, 546, 980, 1168
BmrFI	CCNGG	5 cut(s)	16, 252, 628, 1440, 1857
BmsI	GCATC	5 cut(s)	565, 1070, 1462, 1860, 1867
BpiI	GAAGAC	2 cut(s)	1266, 1322
BpmI	CTGGAG	4 cut(s)	293, 531, 613, 1422
Bpu10I	CCTNAGC	1 cut(s)	6
Bpu14I	TTCGAA	1 cut(s)	2071
BpuEI	CTTGAG	3 cut(s)	1752, 1772, 2075
BpuMI	CCSGG	2 cut(s)	16, 628
BsaAI	YACGTR	1 cut(s)	1100
BsaJI	CCNNGG	6 cut(s)	109, 117, 251, 316, 1439, 1659
BsaXI	ACNNNNNCTCC	2 cut(s)	15, 45
Bsc4I	CCNNNNNNNGG	3 cut(s)	644, 1379, 1440
Bse118I	RCCGGY	2 cut(s)	54, 147
Bse1I	ACTGG	3 cut(s)	276, 770, 2049
Bse21I	CCTNAGG	1 cut(s)	972
Bse3DI	GCAATG	2 cut(s)	1671, 1887
BseBI	CCWGG	3 cut(s)	252, 1440, 1857
BseDI	CCNNGG	6 cut(s)	109, 117, 251, 316, 1439, 1659
BseGI	GGATG	6 cut(s)	211, 870, 958, 1957, 2015, 2130
BseLI	CCNNNNNNNGG	3 cut(s)	644, 1379, 1440
BseMI	GCAATG	2 cut(s)	1671, 1887
BseMII	CTCAG	8 cut(s)	20, 681, 720, 938, 963, 1314, 1731, 2132
BseNI	ACTGG	3 cut(s)	276, 770, 2049
BseRI	GAGGAG	3 cut(s)	300, 1012, 1720
BseSI	GKGCMC	1 cut(s)	1366
BseXI	GCAGC	5 cut(s)	1397, 1495, 1534, 1642, 1970
BsgI	GTGCAG	3 cut(s)	1404, 1773, 1977
Bsh1236I	CGCG	6 cut(s)	95, 97, 105, 140, 387, 504
BshFI	GGCC	7 cut(s)	54, 147, 507, 1003, 1757, 1774, 1847
BshNI	GGYRCC	1 cut(s)	99
BsiHKAI	GWGCWC	2 cut(s)	1207, 1712
BsiSI	CCGG	5 cut(s)	15, 55, 148, 627, 1775
BslFI	GGGAC	3 cut(s)	53, 127, 1456
BslI	CCNNNNNNNGG	3 cut(s)	644, 1379, 1440
BsmAI	GTCTC	6 cut(s)	864, 1255, 1682, 1880, 1912, 1991
BsmBI	CGTCTC	1 cut(s)	1991
BsmFI	GGGAC	3 cut(s)	53, 127, 1456
BsmI	GAATGC	4 cut(s)	737, 1195, 1589, 1751
BsnI	GGCC	7 cut(s)	54, 147, 507, 1003, 1757, 1774, 1847
Bsp119I	TTCGAA	1 cut(s)	2071
Bsp1286I	GDGCHC	6 cut(s)	74, 860, 983, 1207, 1366, 1712
Bsp1407I	TGTACA	1 cut(s)	303
Bsp19I	CCATGG	2 cut(s)	109, 316
Bsp68I	TCGCGA	2 cut(s)	140, 387
BspANI	GGCC	7 cut(s)	54, 147, 507, 1003, 1757, 1774, 1847
BspCNI	CTCAG	8 cut(s)	19, 682, 719, 937, 964, 1315, 1732, 2131
BspFNI	CGCG	6 cut(s)	95, 97, 105, 140, 387, 504
BspHI	TCATGA	1 cut(s)	1555
BspLI	GGNNCC	7 cut(s)	13, 101, 115, 249, 546, 980, 1168
BspMI	ACCTGC	1 cut(s)	359
BspPI	GGATC	5 cut(s)	417, 1161, 1174, 1462, 1847
BspT104I	TTCGAA	1 cut(s)	2071
BspT107I	GGYRCC	1 cut(s)	99
BsrBI	CCGCTC	1 cut(s)	1436
BsrDI	GCAATG	2 cut(s)	1671, 1887
BsrFI	RCCGGY	2 cut(s)	54, 147
BsrGI	TGTACA	1 cut(s)	303
BsrI	ACTGG	3 cut(s)	276, 770, 2049
BssAI	RCCGGY	2 cut(s)	54, 147
BssECI	CCNNGG	6 cut(s)	109, 117, 251, 316, 1439, 1659
BssSI	CACGAG	1 cut(s)	1711
BssT1I	CCWWGG	2 cut(s)	109, 316
Bst2BI	CACGAG	1 cut(s)	1711
Bst2UI	CCWGG	3 cut(s)	252, 1440, 1857
Bst4CI	ACNGT	1 cut(s)	663
BstAPI	GCANNNNNTGC	1 cut(s)	352
BstAUI	TGTACA	1 cut(s)	303
BstBAI	YACGTR	1 cut(s)	1100
BstBI	TTCGAA	1 cut(s)	2071
BstC8I	GCNNGC	8 cut(s)	56, 93, 149, 938, 1573, 1577, 1629, 1827
BstDSI	CCRYGG	2 cut(s)	109, 316
BstF5I	GGATG	6 cut(s)	211, 870, 958, 1957, 2015, 2130
BstFNI	CGCG	6 cut(s)	95, 97, 105, 140, 387, 504
BstHHI	GCGC	3 cut(s)	97, 107, 605
BstMAI	GTCTC	6 cut(s)	864, 1255, 1682, 1880, 1912, 1991
BstMWI	GCNNNNNNNGC	4 cut(s)	97, 352, 1413, 1661
BstNI	CCWGG	3 cut(s)	252, 1440, 1857
BstNSI	RCATGY	3 cut(s)	940, 1404, 1829
BstSCI	CCNGG	5 cut(s)	14, 250, 626, 1438, 1855
BstSLI	GKGCMC	1 cut(s)	1366
BstUI	CGCG	6 cut(s)	95, 97, 105, 140, 387, 504
BstV1I	GCAGC	5 cut(s)	1397, 1495, 1534, 1642, 1970
BstV2I	GAAGAC	2 cut(s)	1266, 1322
BstX2I	RGATCY	7 cut(s)	186, 409, 488, 586, 1166, 1780, 1834
BstYI	RGATCY	7 cut(s)	186, 409, 488, 586, 1166, 1780, 1834
Bsu36I	CCTNAGG	1 cut(s)	972
BsuRI	GGCC	7 cut(s)	54, 147, 507, 1003, 1757, 1774, 1847
BtgI	CCRYGG	2 cut(s)	109, 316
BtsCI	GGATG	6 cut(s)	211, 870, 958, 1957, 2015, 2130
BtsI	GCAGTG	4 cut(s)	901, 1096, 1495, 1532
BtsIMutI	CAGTG	7 cut(s)	777, 901, 1096, 1191, 1433, 1495, 1532
BtuMI	TCGCGA	2 cut(s)	140, 387
BveI	ACCTGC	1 cut(s)	359
Cac8I	GCNNGC	8 cut(s)	56, 93, 149, 938, 1573, 1577, 1629, 1827
CciI	TCATGA	1 cut(s)	1555
CfoI	GCGC	3 cut(s)	97, 107, 605
Cfr10I	RCCGGY	2 cut(s)	54, 147
Cfr13I	GGNCC	8 cut(s)	12, 52, 114, 145, 968, 1002, 1256, 1772
CseI	GACGC	1 cut(s)	1973
Csp6I	GTAC	4 cut(s)	269, 304, 326, 1244
CviQI	GTAC	4 cut(s)	269, 304, 326, 1244
DriI	GACNNNNNGTC	1 cut(s)	32
Eam1105I	GACNNNNNGTC	1 cut(s)	32
Eco130I	CCWWGG	2 cut(s)	109, 316
Eco24I	GRGCYC	3 cut(s)	74, 860, 983
Eco47I	GGWCC	4 cut(s)	12, 114, 968, 1256
Eco57I	CTGAAG	3 cut(s)	351, 653, 1266
Eco81I	CCTNAGG	1 cut(s)	972
EcoO109I	RGGNCCY	1 cut(s)	1002
EcoRI	GAATTC	2 cut(s)	794, 835
EcoRII	CCWGG	3 cut(s)	250, 1438, 1855
EcoT14I	CCWWGG	2 cut(s)	109, 316
EcoT38I	GRGCYC	3 cut(s)	74, 860, 983
ErhI	CCWWGG	2 cut(s)	109, 316
Esp3I	CGTCTC	1 cut(s)	1991
FalI	AAGNNNNNCTT	2 cut(s)	1060, 1092
FaqI	GGGAC	3 cut(s)	53, 127, 1456
FauI	CCCGC	2 cut(s)	1564, 1806
FauNDI	CATATG	1 cut(s)	1640
FbaI	TGATCA	1 cut(s)	1231
FblI	GTMKAC	1 cut(s)	1016
Fnu4HI	GCNGC	8 cut(s)	98, 505, 763, 1386, 1484, 1523, 1656, 1959
FokI	GGATG	6 cut(s)	198, 877, 965, 1964, 2002, 2137
FriOI	GRGCYC	3 cut(s)	74, 860, 983
Fsp4HI	GCNGC	8 cut(s)	98, 505, 763, 1386, 1484, 1523, 1656, 1959
FspBI	CTAG	9 cut(s)	362, 830, 963, 1163, 1287, 1389, 1451, 1838, 1907
GlaI	GCGC	3 cut(s)	96, 106, 604
GluI	GCNGC	8 cut(s)	98, 505, 763, 1386, 1484, 1523, 1656, 1959
GsuI	CTGGAG	4 cut(s)	293, 531, 613, 1422
HaeIII	GGCC	7 cut(s)	54, 147, 507, 1003, 1757, 1774, 1847
HapII	CCGG	5 cut(s)	15, 55, 148, 627, 1775
HgaI	GACGC	1 cut(s)	1973
HhaI	GCGC	3 cut(s)	97, 107, 605
Hin6I	GCGC	3 cut(s)	95, 105, 603
HinP1I	GCGC	3 cut(s)	95, 105, 603
HincII	GTYRAC	1 cut(s)	1762
HindII	GTYRAC	1 cut(s)	1762
HindIII	AAGCTT	1 cut(s)	1414
HinfI	GANTC	5 cut(s)	424, 959, 1214, 1327, 1340
HpaII	CCGG	5 cut(s)	15, 55, 148, 627, 1775
HphI	GGTGA	5 cut(s)	302, 522, 797, 1056, 1955
Hpy166II	GTNNAC	4 cut(s)	438, 530, 1017, 1762
Hpy188I	TCNGA	9 cut(s)	184, 672, 709, 730, 750, 889, 1082, 1324, 2056
Hpy8I	GTNNAC	4 cut(s)	438, 530, 1017, 1762
Hpy99I	CGWCG	2 cut(s)	38, 145
HpyAV	CCTTC	2 cut(s)	993, 1664
HpyCH4III	ACNGT	1 cut(s)	663
HpyCH4IV	ACGT	1 cut(s)	1099
HpyF10VI	GCNNNNNNNGC	4 cut(s)	97, 352, 1413, 1661
HpySE526I	ACGT	1 cut(s)	1099
HspAI	GCGC	3 cut(s)	95, 105, 603
KroI	GCCGGC	2 cut(s)	54, 147
KroNI	GCCGGC	2 cut(s)	56, 149
Ksp22I	TGATCA	1 cut(s)	1231
LmnI	GCTCC	6 cut(s)	550, 978, 1441, 1480, 1707, 2017
Lsp1109I	GCAGC	5 cut(s)	1397, 1495, 1534, 1642, 1970
LweI	GCATC	5 cut(s)	565, 1070, 1462, 1860, 1867
MaeI	CTAG	9 cut(s)	362, 830, 963, 1163, 1287, 1389, 1451, 1838, 1907
MaeII	ACGT	1 cut(s)	1099
MaeIII	GTNAC	3 cut(s)	622, 756, 1943
MbiI	CCGCTC	1 cut(s)	1436
MflI	RGATCY	7 cut(s)	186, 409, 488, 586, 1166, 1780, 1834
MhlI	GDGCHC	6 cut(s)	74, 860, 983, 1207, 1366, 1712
MlyI	GAGTC	1 cut(s)	1336
MmeI	TCCRAC	2 cut(s)	162, 2079
MroNI	GCCGGC	2 cut(s)	54, 147
MroXI	GAANNNNTTC	2 cut(s)	1551, 1998
MseI	TTAA	6 cut(s)	176, 207, 782, 801, 1512, 1635
MspA1I	CMGCKG	2 cut(s)	1142, 2122
MspI	CCGG	5 cut(s)	15, 55, 148, 627, 1775
MspR9I	CCNGG	5 cut(s)	16, 252, 628, 1440, 1857
Mva1269I	GAATGC	4 cut(s)	737, 1195, 1589, 1751
MvaI	CCWGG	3 cut(s)	252, 1440, 1857
MvnI	CGCG	6 cut(s)	95, 97, 105, 140, 387, 504
MwoI	GCNNNNNNNGC	4 cut(s)	97, 352, 1413, 1661
NaeI	GCCGGC	2 cut(s)	56, 149
NciI	CCSGG	2 cut(s)	16, 628
NcoI	CCATGG	2 cut(s)	109, 316
NdeI	CATATG	1 cut(s)	1640
NgoMIV	GCCGGC	2 cut(s)	54, 147
NlaIV	GGNNCC	7 cut(s)	13, 101, 115, 249, 546, 980, 1168
NmeAIII	GCCGAG	1 cut(s)	1640
NmuCI	GTSAC	2 cut(s)	622, 1943
NruI	TCGCGA	2 cut(s)	140, 387
NspI	RCATGY	3 cut(s)	940, 1404, 1829
NspV	TTCGAA	1 cut(s)	2071
PaeI	GCATGC	2 cut(s)	940, 1829
PagI	TCATGA	1 cut(s)	1555
PciI	ACATGT	1 cut(s)	1400
PctI	GAATGC	4 cut(s)	737, 1195, 1589, 1751
PdiI	GCCGGC	2 cut(s)	56, 149
PdmI	GAANNNNTTC	2 cut(s)	1551, 1998
PfeI	GAWTC	4 cut(s)	424, 959, 1214, 1340
PfoI	TCCNGGA	2 cut(s)	14, 1855
PkrI	GCNGC	8 cut(s)	99, 506, 764, 1387, 1485, 1524, 1657, 1960
PleI	GAGTC	1 cut(s)	1335
PpsI	GAGTC	1 cut(s)	1335
Ppu21I	YACGTR	1 cut(s)	1100
PscI	ACATGT	1 cut(s)	1400
Psp6I	CCWGG	3 cut(s)	250, 1438, 1855
PspGI	CCWGG	3 cut(s)	250, 1438, 1855
PspN4I	GGNNCC	7 cut(s)	13, 101, 115, 249, 546, 980, 1168
PspPI	GGNCC	8 cut(s)	12, 52, 114, 145, 968, 1002, 1256, 1772
PsuI	RGATCY	7 cut(s)	186, 409, 488, 586, 1166, 1780, 1834
PvuII	CAGCTG	1 cut(s)	1142
RruI	TCGCGA	2 cut(s)	140, 387
RsaI	GTAC	4 cut(s)	270, 305, 327, 1245
RsaNI	GTAC	4 cut(s)	269, 304, 326, 1244
SaqAI	TTAA	6 cut(s)	176, 207, 782, 801, 1512, 1635
SatI	GCNGC	8 cut(s)	98, 505, 763, 1386, 1484, 1523, 1656, 1959
Sau96I	GGNCC	8 cut(s)	12, 52, 114, 145, 968, 1002, 1256, 1772
SchI	GAGTC	1 cut(s)	1336
ScrFI	CCNGG	5 cut(s)	16, 252, 628, 1440, 1857
SduI	GDGCHC	6 cut(s)	74, 860, 983, 1207, 1366, 1712
SfaNI	GCATC	5 cut(s)	565, 1070, 1462, 1860, 1867
SfuI	TTCGAA	1 cut(s)	2071
SinI	GGWCC	4 cut(s)	12, 114, 968, 1256
SmlI	CTYRAG	3 cut(s)	1751, 1767, 2090
SmoI	CTYRAG	3 cut(s)	1751, 1767, 2090
SphI	GCATGC	2 cut(s)	940, 1829
SspI	AATATT	2 cut(s)	220, 1893
SspMI	CTAG	9 cut(s)	362, 830, 963, 1163, 1287, 1389, 1451, 1838, 1907
StyD4I	CCNGG	5 cut(s)	14, 250, 626, 1438, 1855
StyI	CCWWGG	2 cut(s)	109, 316
TaaI	ACNGT	1 cut(s)	663
TaiI	ACGT	1 cut(s)	1102
TaqI	TCGA	2 cut(s)	1007, 2071
TaqII	GACCGA	1 cut(s)	131
TatI	WGTACW	3 cut(s)	268, 303, 1243
TauI	GCSGC	3 cut(s)	100, 507, 765
TfiI	GAWTC	4 cut(s)	424, 959, 1214, 1340
Tru1I	TTAA	6 cut(s)	176, 207, 782, 801, 1512, 1635
Tru9I	TTAA	6 cut(s)	176, 207, 782, 801, 1512, 1635
TscAI	CASTG	7 cut(s)	777, 901, 1096, 1191, 1433, 1502, 1532
TseFI	GTSAC	2 cut(s)	622, 1943
TseI	GCWGC	5 cut(s)	1385, 1483, 1522, 1655, 1958
Tsp45I	GTSAC	2 cut(s)	622, 1943
TspDTI	ATGAA	7 cut(s)	181, 340, 828, 1025, 1055, 1544, 1572
TspGWI	ACGGA	2 cut(s)	445, 877
TspRI	CASTG	7 cut(s)	777, 901, 1096, 1191, 1433, 1502, 1532
VpaK11BI	GGWCC	4 cut(s)	12, 114, 968, 1256
XapI	RAATTY	5 cut(s)	794, 835, 1108, 1805, 1994
XceI	RCATGY	3 cut(s)	940, 1404, 1829
XcmI	CCANNNNNNNNNTGG	2 cut(s)	907, 1139
XmiI	GTMKAC	1 cut(s)	1016
XmnI	GAANNNNTTC	2 cut(s)	1551, 1998
XspI	CTAG	9 cut(s)	362, 830, 963, 1163, 1287, 1389, 1451, 1838, 1907

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.