SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37025 AT2G37025 AT2G37025 |
| fragaria_vesca | FvH4_6g16130 FvH4_6g16130 FvH4_6g16130 FvH4_6g16130 |
| malus_domestica | MD04G1095600.v1.1 MD04G1095700.v1.1 MD12G1115600.v1.1 |
| prunus_persica | Prupe.6G234700_v2.0.a1 Prupe.6G234700_v2.0.a1 |
| pyrus_communis | pycom04g09040 pycom04g09050 pycom12g11500 pycom12g11510 |
| rosa_chinensis | RchiOBHm_Chr3g0469971 |
| rosa_laevigata | RLG00000024308 |
| rosa_multiflora | Rmu_co8179602.1_g000001 Rmu_sc0007963.1_g000001 Rmu_sc0008347.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00411330 |
| rosa_rugosa | Rorug03G0105900 |
| rosa_samantha | Rh3AG154800 Rh3BG178900 Rh3CG169500 Rh3DG196300 |
| rosa_wichuraiana | Rw3G014580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 646 |
| Acc36I | ACCTGC | 1 cut(s) | 677 |
| AccB1I | GGYRCC | 1 cut(s) | 770 |
| AccBSI | CCGCTC | 1 cut(s) | 253 |
| AccII | CGCG | 1 cut(s) | 273 |
| AciI | CCGC | 5 cut(s) | 62, 253, 271, 273, 631 |
| AclWI | GGATC | 4 cut(s) | 12, 888, 1288, 1557 |
| AcsI | RAATTY | 5 cut(s) | 137, 449, 566, 986, 1034 |
| AcuI | CTGAAG | 4 cut(s) | 610, 1080, 1155, 1532 |
| AcyI | GRCGYC | 1 cut(s) | 643 |
| AfaI | GTAC | 1 cut(s) | 1450 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 299 |
| AjiI | CACGTC | 1 cut(s) | 1007 |
| AjnI | CCWGG | 2 cut(s) | 499, 616 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 303, 335, 435, 467 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 1690 |
| AluBI | AGCT | 4 cut(s) | 14, 134, 1522, 1585 |
| AluI | AGCT | 4 cut(s) | 14, 134, 1522, 1585 |
| Alw21I | GWGCWC | 1 cut(s) | 114 |
| Alw26I | GTCTC | 2 cut(s) | 501, 805 |
| AlwI | GGATC | 4 cut(s) | 12, 888, 1288, 1557 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 947 |
| ApeKI | GCWGC | 3 cut(s) | 793, 869, 1612 |
| ApoI | RAATTY | 5 cut(s) | 137, 449, 566, 986, 1034 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 366 |
| AspA2I | CCTAGG | 1 cut(s) | 926 |
| AspS9I | GGNCC | 1 cut(s) | 455 |
| AsuHPI | GGTGA | 5 cut(s) | 67, 260, 594, 632, 1159 |
| AvaII | GGWCC | 1 cut(s) | 455 |
| AvrII | CCTAGG | 1 cut(s) | 926 |
| AxyI | CCTNAGG | 2 cut(s) | 948, 1298 |
| BaeGI | GKGCMC | 1 cut(s) | 775 |
| BanI | GGYRCC | 1 cut(s) | 770 |
| Bbv12I | GWGCWC | 1 cut(s) | 114 |
| BbvI | GCAGC | 3 cut(s) | 780, 856, 1624 |
| BccI | CCATC | 4 cut(s) | 146, 326, 870, 1373 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1007, 1041 |
| BciT130I | CCWGG | 2 cut(s) | 501, 618 |
| BclI | TGATCA | 1 cut(s) | 1174 |
| BcoDI | GTCTC | 2 cut(s) | 501, 805 |
| BfaI | CTAG | 4 cut(s) | 119, 675, 897, 927 |
| BfmI | CTRYAG | 3 cut(s) | 528, 873, 1455 |
| BfuAI | ACCTGC | 1 cut(s) | 677 |
| BglII | AGATCT | 4 cut(s) | 899, 1235, 1310, 1459 |
| BisI | GCNGC | 4 cut(s) | 254, 794, 870, 1613 |
| BlnI | CCTAGG | 1 cut(s) | 926 |
| BlsI | GCNGC | 4 cut(s) | 255, 795, 871, 1614 |
| Bme1390I | CCNGG | 2 cut(s) | 501, 618 |
| Bme18I | GGWCC | 1 cut(s) | 455 |
| BmgBI | CACGTC | 1 cut(s) | 1007 |
| BmgT120I | GGNCC | 1 cut(s) | 455 |
| BmiI | GGNNCC | 2 cut(s) | 705, 772 |
| BmrFI | CCNGG | 2 cut(s) | 501, 618 |
| BmsI | GCATC | 4 cut(s) | 1120, 1195, 1270, 1345 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 731, 763 |
| BpmI | CTGGAG | 1 cut(s) | 483 |
| BpuEI | CTTGAG | 1 cut(s) | 719 |
| BsaHI | GRCGYC | 1 cut(s) | 643 |
| BsaI | GGTCTC | 1 cut(s) | 501 |
| BsaJI | CCNNGG | 6 cut(s) | 271, 298, 500, 594, 926, 1607 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1265, 1295 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 299 |
| Bse1I | ACTGG | 3 cut(s) | 90, 653, 941 |
| Bse21I | CCTNAGG | 2 cut(s) | 948, 1298 |
| Bse3DI | GCAATG | 1 cut(s) | 932 |
| BseBI | CCWGG | 2 cut(s) | 501, 618 |
| BseDI | CCNNGG | 6 cut(s) | 271, 298, 500, 594, 926, 1607 |
| BseGI | GGATG | 9 cut(s) | 94, 265, 289, 349, 589, 916, 1327, 1350, 1597 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 299 |
| BseMI | GCAATG | 1 cut(s) | 932 |
| BseMII | CTCAG | 9 cut(s) | 29, 821, 917, 939, 1289, 1350, 1380, 1477, 1478 |
| BseNI | ACTGG | 3 cut(s) | 90, 653, 941 |
| BseRI | GAGGAG | 3 cut(s) | 965, 1315, 1550 |
| BseSI | GKGCMC | 1 cut(s) | 775 |
| BseXI | GCAGC | 3 cut(s) | 780, 856, 1624 |
| BsgI | GTGCAG | 1 cut(s) | 66 |
| Bsh1236I | CGCG | 1 cut(s) | 273 |
| BshNI | GGYRCC | 1 cut(s) | 770 |
| BsiHKAI | GWGCWC | 1 cut(s) | 114 |
| BsiWI | CGTACG | 1 cut(s) | 1448 |
| BslFI | GGGAC | 2 cut(s) | 317, 1481 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 299 |
| BsmAI | GTCTC | 2 cut(s) | 501, 805 |
| BsmFI | GGGAC | 2 cut(s) | 317, 1481 |
| BsmI | GAATGC | 3 cut(s) | 184, 256, 898 |
| Bso31I | GGTCTC | 1 cut(s) | 501 |
| Bsp1286I | GDGCHC | 2 cut(s) | 114, 775 |
| BspACI | CCGC | 5 cut(s) | 62, 253, 271, 273, 631 |
| BspCNI | CTCAG | 9 cut(s) | 28, 820, 916, 940, 1290, 1351, 1381, 1476, 1479 |
| BspFNI | CGCG | 1 cut(s) | 273 |
| BspHI | TCATGA | 1 cut(s) | 7 |
| BspLI | GGNNCC | 2 cut(s) | 705, 772 |
| BspMI | ACCTGC | 1 cut(s) | 677 |
| BspPI | GGATC | 4 cut(s) | 12, 888, 1288, 1557 |
| BspT107I | GGYRCC | 1 cut(s) | 770 |
| BspTNI | GGTCTC | 1 cut(s) | 501 |
| BsrBI | CCGCTC | 1 cut(s) | 253 |
| BsrDI | GCAATG | 1 cut(s) | 932 |
| BsrI | ACTGG | 3 cut(s) | 90, 653, 941 |
| BssECI | CCNNGG | 6 cut(s) | 271, 298, 500, 594, 926, 1607 |
| BssNI | GRCGYC | 1 cut(s) | 643 |
| BssT1I | CCWWGG | 4 cut(s) | 298, 594, 926, 1607 |
| Bst2UI | CCWGG | 2 cut(s) | 501, 618 |
| Bst4CI | ACNGT | 5 cut(s) | 148, 553, 981, 1222, 1706 |
| BstACI | GRCGYC | 1 cut(s) | 643 |
| BstC8I | GCNNGC | 2 cut(s) | 1020, 1587 |
| BstDSI | CCRYGG | 1 cut(s) | 271 |
| BstEII | GGTNACC | 1 cut(s) | 1147 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 297 |
| BstF5I | GGATG | 9 cut(s) | 94, 265, 289, 349, 589, 916, 1327, 1350, 1597 |
| BstFNI | CGCG | 1 cut(s) | 273 |
| BstMAI | GTCTC | 2 cut(s) | 501, 805 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 943 |
| BstNI | CCWGG | 2 cut(s) | 501, 618 |
| BstPI | GGTNACC | 1 cut(s) | 1147 |
| BstSCI | CCNGG | 2 cut(s) | 499, 616 |
| BstSFI | CTRYAG | 3 cut(s) | 528, 873, 1455 |
| BstSLI | GKGCMC | 1 cut(s) | 775 |
| BstUI | CGCG | 1 cut(s) | 273 |
| BstV1I | GCAGC | 3 cut(s) | 780, 856, 1624 |
| BstX2I | RGATCY | 6 cut(s) | 899, 1235, 1293, 1310, 1459, 1549 |
| BstYI | RGATCY | 6 cut(s) | 899, 1235, 1293, 1310, 1459, 1549 |
| Bsu36I | CCTNAGG | 2 cut(s) | 948, 1298 |
| BtgI | CCRYGG | 1 cut(s) | 271 |
| BtrI | CACGTC | 1 cut(s) | 1007 |
| BtsCI | GGATG | 9 cut(s) | 94, 265, 289, 349, 589, 916, 1327, 1350, 1597 |
| BtsIMutI | CAGTG | 7 cut(s) | 83, 483, 558, 890, 948, 977, 1562 |
| BveI | ACCTGC | 1 cut(s) | 677 |
| Cac8I | GCNNGC | 2 cut(s) | 1020, 1587 |
| CaiI | CAGNNNCTG | 1 cut(s) | 947 |
| CciI | TCATGA | 1 cut(s) | 7 |
| Cfr13I | GGNCC | 1 cut(s) | 455 |
| Cfr42I | CCGCGG | 1 cut(s) | 274 |
| Csp6I | GTAC | 1 cut(s) | 1449 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1328, 1363 |
| CviAII | CATG | 7 cut(s) | 8, 40, 371, 396, 1097, 1153, 1546 |
| CviJI | RGCY | 7 cut(s) | 14, 134, 793, 1267, 1426, 1522, 1585 |
| CviKI_1 | RGCY | 7 cut(s) | 14, 134, 793, 1267, 1426, 1522, 1585 |
| CviQI | GTAC | 1 cut(s) | 1449 |
| EciI | GGCGGA | 2 cut(s) | 77, 646 |
| Eco130I | CCWWGG | 4 cut(s) | 298, 594, 926, 1607 |
| Eco31I | GGTCTC | 1 cut(s) | 501 |
| Eco32I | GATATC | 2 cut(s) | 1161, 1354 |
| Eco47I | GGWCC | 1 cut(s) | 455 |
| Eco57I | CTGAAG | 4 cut(s) | 610, 1080, 1155, 1532 |
| Eco81I | CCTNAGG | 2 cut(s) | 948, 1298 |
| Eco91I | GGTNACC | 1 cut(s) | 1147 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 297 |
| EcoO65I | GGTNACC | 1 cut(s) | 1147 |
| EcoRI | GAATTC | 1 cut(s) | 986 |
| EcoRII | CCWGG | 2 cut(s) | 499, 616 |
| EcoRV | GATATC | 2 cut(s) | 1161, 1354 |
| EcoT14I | CCWWGG | 4 cut(s) | 298, 594, 926, 1607 |
| ErhI | CCWWGG | 4 cut(s) | 298, 594, 926, 1607 |
| FaeI | CATG | 7 cut(s) | 11, 43, 374, 399, 1100, 1156, 1549 |
| FaqI | GGGAC | 2 cut(s) | 317, 1481 |
| FatI | CATG | 7 cut(s) | 7, 39, 370, 395, 1096, 1152, 1545 |
| FauI | CCCGC | 2 cut(s) | 266, 278 |
| FbaI | TGATCA | 1 cut(s) | 1174 |
| Fnu4HI | GCNGC | 4 cut(s) | 254, 794, 870, 1613 |
| FokI | GGATG | 9 cut(s) | 101, 252, 276, 356, 576, 903, 1334, 1357, 1584 |
| Fsp4HI | GCNGC | 4 cut(s) | 254, 794, 870, 1613 |
| FspBI | CTAG | 4 cut(s) | 119, 675, 897, 927 |
| GluI | GCNGC | 4 cut(s) | 254, 794, 870, 1613 |
| GsuI | CTGGAG | 1 cut(s) | 483 |
| Hin1I | GRCGYC | 1 cut(s) | 643 |
| Hin1II | CATG | 7 cut(s) | 11, 43, 374, 399, 1100, 1156, 1549 |
| HincII | GTYRAC | 3 cut(s) | 37, 549, 1273 |
| HindII | GTYRAC | 3 cut(s) | 37, 549, 1273 |
| HinfI | GANTC | 8 cut(s) | 542, 599, 813, 956, 994, 1055, 1274, 1280 |
| HphI | GGTGA | 5 cut(s) | 67, 260, 594, 632, 1159 |
| Hpy166II | GTNNAC | 4 cut(s) | 37, 549, 689, 1273 |
| Hpy188III | TCNNGA | 8 cut(s) | 8, 216, 329, 413, 563, 991, 1297, 1710 |
| Hpy8I | GTNNAC | 4 cut(s) | 37, 549, 689, 1273 |
| HpyAV | CCTTC | 4 cut(s) | 52, 1248, 1323, 1689 |
| HpyCH4III | ACNGT | 5 cut(s) | 148, 553, 981, 1222, 1706 |
| HpyCH4IV | ACGT | 2 cut(s) | 643, 1006 |
| HpyCH4V | TGCA | 7 cut(s) | 24, 83, 182, 374, 389, 576, 1403 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 943 |
| HpySE526I | ACGT | 2 cut(s) | 643, 1006 |
| Hsp92I | GRCGYC | 1 cut(s) | 643 |
| Hsp92II | CATG | 7 cut(s) | 11, 43, 374, 399, 1100, 1156, 1549 |
| Ksp22I | TGATCA | 1 cut(s) | 1174 |
| KspI | CCGCGG | 1 cut(s) | 274 |
| LmnI | GCTCC | 1 cut(s) | 82 |
| Lsp1109I | GCAGC | 3 cut(s) | 780, 856, 1624 |
| LweI | GCATC | 4 cut(s) | 1120, 1195, 1270, 1345 |
| MaeI | CTAG | 4 cut(s) | 119, 675, 897, 927 |
| MaeII | ACGT | 2 cut(s) | 643, 1006 |
| MaeIII | GTNAC | 8 cut(s) | 142, 553, 620, 1078, 1147, 1490, 1499, 1560 |
| MbiI | CCGCTC | 1 cut(s) | 253 |
| MflI | RGATCY | 6 cut(s) | 899, 1235, 1293, 1310, 1459, 1549 |
| MhlI | GDGCHC | 2 cut(s) | 114, 775 |
| MlyI | GAGTC | 3 cut(s) | 807, 1268, 1274 |
| MroXI | GAANNNNTTC | 1 cut(s) | 366 |
| MseI | TTAA | 6 cut(s) | 243, 506, 780, 819, 1122, 1197 |
| MspA1I | CMGCKG | 1 cut(s) | 273 |
| MspR9I | CCNGG | 2 cut(s) | 501, 618 |
| Mva1269I | GAATGC | 3 cut(s) | 184, 256, 898 |
| MvaI | CCWGG | 2 cut(s) | 501, 618 |
| MvnI | CGCG | 1 cut(s) | 273 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 943 |
| NlaIII | CATG | 7 cut(s) | 11, 43, 374, 399, 1100, 1156, 1549 |
| NlaIV | GGNNCC | 2 cut(s) | 705, 772 |
| NmuCI | GTSAC | 6 cut(s) | 553, 620, 1078, 1147, 1499, 1560 |
| PagI | TCATGA | 1 cut(s) | 7 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1003 |
| PctI | GAATGC | 3 cut(s) | 184, 256, 898 |
| PdmI | GAANNNNTTC | 1 cut(s) | 366 |
| PfeI | GAWTC | 5 cut(s) | 542, 599, 956, 994, 1055 |
| Pfl23II | CGTACG | 1 cut(s) | 1448 |
| PflFI | GACNNNGTC | 1 cut(s) | 979 |
| PkrI | GCNGC | 4 cut(s) | 255, 795, 871, 1614 |
| PleI | GAGTC | 3 cut(s) | 807, 1268, 1274 |
| PpsI | GAGTC | 3 cut(s) | 807, 1268, 1274 |
| Psp6I | CCWGG | 2 cut(s) | 499, 616 |
| PspEI | GGTNACC | 1 cut(s) | 1147 |
| PspGI | CCWGG | 2 cut(s) | 499, 616 |
| PspLI | CGTACG | 1 cut(s) | 1448 |
| PspN4I | GGNNCC | 2 cut(s) | 705, 772 |
| PspPI | GGNCC | 1 cut(s) | 455 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1612, 1644 |
| PstNI | CAGNNNCTG | 1 cut(s) | 947 |
| PsuI | RGATCY | 6 cut(s) | 899, 1235, 1293, 1310, 1459, 1549 |
| PsyI | GACNNNGTC | 1 cut(s) | 979 |
| RsaI | GTAC | 1 cut(s) | 1450 |
| RsaNI | GTAC | 1 cut(s) | 1449 |
| SacII | CCGCGG | 1 cut(s) | 274 |
| SaqAI | TTAA | 6 cut(s) | 243, 506, 780, 819, 1122, 1197 |
| SatI | GCNGC | 4 cut(s) | 254, 794, 870, 1613 |
| Sau96I | GGNCC | 1 cut(s) | 455 |
| SchI | GAGTC | 3 cut(s) | 807, 1268, 1274 |
| ScrFI | CCNGG | 2 cut(s) | 501, 618 |
| SduI | GDGCHC | 2 cut(s) | 114, 775 |
| SfaNI | GCATC | 4 cut(s) | 1120, 1195, 1270, 1345 |
| SfcI | CTRYAG | 3 cut(s) | 528, 873, 1455 |
| Sfr303I | CCGCGG | 1 cut(s) | 274 |
| SgrBI | CCGCGG | 1 cut(s) | 274 |
| SinI | GGWCC | 1 cut(s) | 455 |
| SmlI | CTYRAG | 1 cut(s) | 698 |
| SmoI | CTYRAG | 1 cut(s) | 698 |
| SsiI | CCGC | 5 cut(s) | 62, 253, 271, 273, 631 |
| SspMI | CTAG | 4 cut(s) | 119, 675, 897, 927 |
| StyD4I | CCNGG | 2 cut(s) | 499, 616 |
| StyI | CCWWGG | 4 cut(s) | 298, 594, 926, 1607 |
| TaaI | ACNGT | 5 cut(s) | 148, 553, 981, 1222, 1706 |
| TaiI | ACGT | 2 cut(s) | 646, 1009 |
| TaqI | TCGA | 2 cut(s) | 1252, 1327 |
| TaqII | GACCGA | 1 cut(s) | 483 |
| TauI | GCSGC | 1 cut(s) | 256 |
| TfiI | GAWTC | 5 cut(s) | 542, 599, 956, 994, 1055 |
| Tru1I | TTAA | 6 cut(s) | 243, 506, 780, 819, 1122, 1197 |
| Tru9I | TTAA | 6 cut(s) | 243, 506, 780, 819, 1122, 1197 |
| TscAI | CASTG | 7 cut(s) | 90, 490, 558, 890, 948, 984, 1569 |
| TseFI | GTSAC | 6 cut(s) | 553, 620, 1078, 1147, 1499, 1560 |
| TseI | GCWGC | 3 cut(s) | 793, 869, 1612 |
| Tsp45I | GTSAC | 6 cut(s) | 553, 620, 1078, 1147, 1499, 1560 |
| TspRI | CASTG | 7 cut(s) | 90, 490, 558, 890, 948, 984, 1569 |
| Tth111I | GACNNNGTC | 1 cut(s) | 979 |
| VpaK11BI | GGWCC | 1 cut(s) | 455 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 297 |
| XapI | RAATTY | 5 cut(s) | 137, 449, 566, 986, 1034 |
| XmaJI | CCTAGG | 1 cut(s) | 926 |
| XmnI | GAANNNNTTC | 1 cut(s) | 366 |
| XspI | CTAG | 4 cut(s) | 119, 675, 897, 927 |
| ZraI | GACGTC | 1 cut(s) | 644 |