SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37025 AT2G37025 AT2G37025 |
| fragaria_vesca | FvH4_6g16130 FvH4_6g16130 FvH4_6g16130 FvH4_6g16130 |
| malus_domestica | MD04G1095600.v1.1 MD04G1095700.v1.1 MD12G1115600.v1.1 |
| prunus_persica | Prupe.6G234700_v2.0.a1 Prupe.6G234700_v2.0.a1 |
| pyrus_communis | pycom04g09040 pycom04g09050 pycom12g11500 pycom12g11510 |
| rosa_chinensis | RchiOBHm_Chr3g0469971 |
| rosa_laevigata | RLG00000024308 |
| rosa_multiflora | Rmu_co8179602.1_g000001 Rmu_sc0007963.1_g000001 Rmu_sc0008347.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00411330 |
| rosa_rugosa | Rorug03G0105900 |
| rosa_samantha | Rh3AG154800 Rh3BG178900 Rh3CG169500 Rh3DG196300 |
| rosa_wichuraiana | Rw3G014580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 829 |
| AatII | GACGTC | 1 cut(s) | 505 |
| Acc36I | ACCTGC | 1 cut(s) | 536 |
| AccB1I | GGYRCC | 2 cut(s) | 508, 1837 |
| AccII | CGCG | 1 cut(s) | 241 |
| AciI | CCGC | 3 cut(s) | 214, 239, 491 |
| AclWI | GGATC | 2 cut(s) | 1221, 1296 |
| AcsI | RAATTY | 4 cut(s) | 404, 878, 1055, 1136 |
| AcuI | CTGAAG | 2 cut(s) | 1182, 1332 |
| AcyI | GRCGYC | 1 cut(s) | 502 |
| AdeI | CACNNNGTG | 1 cut(s) | 16 |
| AfaI | GTAC | 4 cut(s) | 526, 1034, 1770, 1788 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 13, 260, 518, 1636 |
| AjiI | CACGTC | 1 cut(s) | 899 |
| AjnI | CCWGG | 3 cut(s) | 12, 454, 1048 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 264, 296, 390, 422, 947, 979, 1485, 1517 |
| AleI | CACNNNNGTG | 2 cut(s) | 231, 1832 |
| AluBI | AGCT | 4 cut(s) | 1101, 1636, 1875, 1898 |
| AluI | AGCT | 4 cut(s) | 1101, 1636, 1875, 1898 |
| Alw21I | GWGCWC | 3 cut(s) | 75, 626, 1886 |
| Alw26I | GTCTC | 4 cut(s) | 258, 456, 682, 1462 |
| AlwI | GGATC | 2 cut(s) | 1221, 1296 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 839 |
| AoxI | GGCC | 1 cut(s) | 236 |
| ApeKI | GCWGC | 4 cut(s) | 758, 1084, 1087, 1663 |
| ApoI | RAATTY | 4 cut(s) | 404, 878, 1055, 1136 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 883, 915, 1001, 1033 |
| AseI | ATTAAT | 1 cut(s) | 915 |
| AspS9I | GGNCC | 2 cut(s) | 236, 410 |
| AsuC2I | CCSGG | 1 cut(s) | 1120 |
| AsuHPI | GGTGA | 4 cut(s) | 28, 218, 1477, 1819 |
| AsuII | TTCGAA | 1 cut(s) | 889 |
| AvaII | GGWCC | 1 cut(s) | 410 |
| AxyI | CCTNAGG | 1 cut(s) | 840 |
| BanI | GGYRCC | 2 cut(s) | 508, 1837 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1090, 1122 |
| BauI | CACGAG | 1 cut(s) | 231 |
| Bbv12I | GWGCWC | 3 cut(s) | 75, 626, 1886 |
| BbvI | GCAGC | 4 cut(s) | 745, 1071, 1074, 1675 |
| BccI | CCATC | 5 cut(s) | 107, 287, 1462, 1475, 1741 |
| BceAI | ACGGC | 2 cut(s) | 1263, 1791 |
| BciT130I | CCWGG | 3 cut(s) | 14, 456, 1050 |
| BclI | TGATCA | 1 cut(s) | 769 |
| BcnI | CCSGG | 1 cut(s) | 1120 |
| BcoDI | GTCTC | 4 cut(s) | 258, 456, 682, 1462 |
| BfaI | CTAG | 3 cut(s) | 374, 534, 786 |
| BfmI | CTRYAG | 2 cut(s) | 762, 1096 |
| BfuAI | ACCTGC | 1 cut(s) | 536 |
| BglII | AGATCT | 4 cut(s) | 788, 1337, 1412, 1564 |
| BisI | GCNGC | 6 cut(s) | 215, 239, 759, 1085, 1088, 1664 |
| BlsI | GCNGC | 6 cut(s) | 216, 240, 760, 1086, 1089, 1665 |
| Bme1390I | CCNGG | 4 cut(s) | 14, 456, 1050, 1120 |
| Bme18I | GGWCC | 1 cut(s) | 410 |
| BmgBI | CACGTC | 1 cut(s) | 899 |
| BmgT120I | GGNCC | 2 cut(s) | 236, 410 |
| BmiI | GGNNCC | 2 cut(s) | 510, 1839 |
| BmrFI | CCNGG | 4 cut(s) | 14, 456, 1050, 1120 |
| BmsI | GCATC | 2 cut(s) | 1372, 1447 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 608, 640 |
| BpmI | CTGGAG | 1 cut(s) | 438 |
| Bpu14I | TTCGAA | 1 cut(s) | 889 |
| BpuMI | CCSGG | 1 cut(s) | 1120 |
| BsaBI | GATNNNNATC | 1 cut(s) | 573 |
| BsaHI | GRCGYC | 1 cut(s) | 502 |
| BsaI | GGTCTC | 1 cut(s) | 456 |
| BsaJI | CCNNGG | 7 cut(s) | 259, 455, 1037, 1048, 1119, 1658, 1830 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 13, 260, 518, 1636 |
| Bse1I | ACTGG | 5 cut(s) | 51, 211, 405, 512, 606 |
| Bse21I | CCTNAGG | 1 cut(s) | 840 |
| Bse3DI | GCAATG | 1 cut(s) | 1794 |
| Bse8I | GATNNNNATC | 1 cut(s) | 573 |
| BseBI | CCWGG | 3 cut(s) | 14, 456, 1050 |
| BseDI | CCNNGG | 7 cut(s) | 259, 455, 1037, 1048, 1119, 1658, 1830 |
| BseGI | GGATG | 6 cut(s) | 55, 250, 310, 1452, 1459, 1648 |
| BseJI | GATNNNNATC | 1 cut(s) | 573 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 13, 260, 518, 1636 |
| BseMI | GCAATG | 1 cut(s) | 1794 |
| BseMII | CTCAG | 6 cut(s) | 806, 831, 1146, 1296, 1452, 1582 |
| BseNI | ACTGG | 5 cut(s) | 51, 211, 405, 512, 606 |
| BseRI | GAGGAG | 2 cut(s) | 857, 1601 |
| BseXI | GCAGC | 4 cut(s) | 745, 1071, 1074, 1675 |
| BseYI | CCCAGC | 2 cut(s) | 1684, 1866 |
| BsgI | GTGCAG | 2 cut(s) | 27, 501 |
| Bsh1236I | CGCG | 1 cut(s) | 241 |
| BshFI | GGCC | 1 cut(s) | 238 |
| BshNI | GGYRCC | 2 cut(s) | 508, 1837 |
| BsiHKAI | GWGCWC | 3 cut(s) | 75, 626, 1886 |
| BsiSI | CCGG | 1 cut(s) | 1119 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 13, 260, 518, 1636 |
| BsmAI | GTCTC | 4 cut(s) | 258, 456, 682, 1462 |
| BsmI | GAATGC | 2 cut(s) | 145, 217 |
| BsnI | GGCC | 1 cut(s) | 238 |
| Bso31I | GGTCTC | 1 cut(s) | 456 |
| Bsp119I | TTCGAA | 1 cut(s) | 889 |
| Bsp1286I | GDGCHC | 3 cut(s) | 75, 626, 1886 |
| Bsp1407I | TGTACA | 1 cut(s) | 1768 |
| BspACI | CCGC | 3 cut(s) | 214, 239, 491 |
| BspANI | GGCC | 1 cut(s) | 238 |
| BspCNI | CTCAG | 6 cut(s) | 805, 832, 1147, 1297, 1453, 1581 |
| BspFNI | CGCG | 1 cut(s) | 241 |
| BspLI | GGNNCC | 2 cut(s) | 510, 1839 |
| BspMI | ACCTGC | 1 cut(s) | 536 |
| BspPI | GGATC | 2 cut(s) | 1221, 1296 |
| BspQI | GCTCTTC | 1 cut(s) | 1806 |
| BspT104I | TTCGAA | 1 cut(s) | 889 |
| BspT107I | GGYRCC | 2 cut(s) | 508, 1837 |
| BspTNI | GGTCTC | 1 cut(s) | 456 |
| BsrDI | GCAATG | 1 cut(s) | 1794 |
| BsrGI | TGTACA | 1 cut(s) | 1768 |
| BsrI | ACTGG | 5 cut(s) | 51, 211, 405, 512, 606 |
| BssECI | CCNNGG | 7 cut(s) | 259, 455, 1037, 1048, 1119, 1658, 1830 |
| BssNI | GRCGYC | 1 cut(s) | 502 |
| BssSI | CACGAG | 1 cut(s) | 231 |
| BssT1I | CCWWGG | 3 cut(s) | 259, 1037, 1658 |
| Bst2BI | CACGAG | 1 cut(s) | 231 |
| Bst2UI | CCWGG | 3 cut(s) | 14, 456, 1050 |
| Bst4CI | ACNGT | 5 cut(s) | 109, 1015, 1241, 1625, 1831 |
| Bst6I | CTCTTC | 2 cut(s) | 555, 1806 |
| BstACI | GRCGYC | 1 cut(s) | 502 |
| BstAUI | TGTACA | 1 cut(s) | 1768 |
| BstBI | TTCGAA | 1 cut(s) | 889 |
| BstC8I | GCNNGC | 3 cut(s) | 81, 1638, 1900 |
| BstDEI | CTNAG | 8 cut(s) | 675, 792, 840, 1155, 1305, 1461, 1568, 1790 |
| BstDSI | CCRYGG | 1 cut(s) | 1830 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 11, 258 |
| BstF5I | GGATG | 6 cut(s) | 55, 250, 310, 1452, 1459, 1648 |
| BstFNI | CGCG | 1 cut(s) | 241 |
| BstMAI | GTCTC | 4 cut(s) | 258, 456, 682, 1462 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 488, 1881 |
| BstNI | CCWGG | 3 cut(s) | 14, 456, 1050 |
| BstNSI | RCATGY | 1 cut(s) | 1600 |
| BstSCI | CCNGG | 4 cut(s) | 12, 454, 1048, 1118 |
| BstSFI | CTRYAG | 2 cut(s) | 762, 1096 |
| BstUI | CGCG | 1 cut(s) | 241 |
| BstV1I | GCAGC | 4 cut(s) | 745, 1071, 1074, 1675 |
| BstX2I | RGATCY | 4 cut(s) | 788, 1337, 1412, 1564 |
| BstYI | RGATCY | 4 cut(s) | 788, 1337, 1412, 1564 |
| Bsu36I | CCTNAGG | 1 cut(s) | 840 |
| BsuRI | GGCC | 1 cut(s) | 238 |
| BtgI | CCRYGG | 1 cut(s) | 1830 |
| BtrI | CACGTC | 1 cut(s) | 899 |
| BtsCI | GGATG | 6 cut(s) | 55, 250, 310, 1452, 1459, 1648 |
| BtsIMutI | CAGTG | 7 cut(s) | 44, 613, 779, 840, 1011, 1246, 1613 |
| BveI | ACCTGC | 1 cut(s) | 536 |
| Cac8I | GCNNGC | 3 cut(s) | 81, 1638, 1900 |
| CaiI | CAGNNNCTG | 1 cut(s) | 839 |
| Cfr13I | GGNCC | 2 cut(s) | 236, 410 |
| CseI | GACGC | 1 cut(s) | 877 |
| CsiI | ACCWGGT | 1 cut(s) | 12 |
| Csp6I | GTAC | 4 cut(s) | 525, 1033, 1769, 1787 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1430, 1465 |
| CviAII | CATG | 9 cut(s) | 332, 357, 990, 1199, 1274, 1424, 1597, 1784, 1808 |
| CviJI | RGCY | 9 cut(s) | 238, 785, 1101, 1528, 1636, 1688, 1778, 1875, 1898 |
| CviKI_1 | RGCY | 9 cut(s) | 238, 785, 1101, 1528, 1636, 1688, 1778, 1875, 1898 |
| CviQI | GTAC | 4 cut(s) | 525, 1033, 1769, 1787 |
| DdeI | CTNAG | 8 cut(s) | 675, 792, 840, 1155, 1305, 1461, 1568, 1790 |
| DraIII | CACNNNGTG | 1 cut(s) | 16 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 829 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 829 |
| Eam1104I | CTCTTC | 2 cut(s) | 555, 1806 |
| EarI | CTCTTC | 2 cut(s) | 555, 1806 |
| EciI | GGCGGA | 1 cut(s) | 506 |
| Eco130I | CCWWGG | 3 cut(s) | 259, 1037, 1658 |
| Eco31I | GGTCTC | 1 cut(s) | 456 |
| Eco32I | GATATC | 2 cut(s) | 1188, 1263 |
| Eco47I | GGWCC | 1 cut(s) | 410 |
| Eco57I | CTGAAG | 2 cut(s) | 1182, 1332 |
| Eco81I | CCTNAGG | 1 cut(s) | 840 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 11, 258 |
| EcoRI | GAATTC | 1 cut(s) | 878 |
| EcoRII | CCWGG | 3 cut(s) | 12, 454, 1048 |
| EcoRV | GATATC | 2 cut(s) | 1188, 1263 |
| EcoT14I | CCWWGG | 3 cut(s) | 259, 1037, 1658 |
| EcoT22I | ATGCAT | 1 cut(s) | 1602 |
| ErhI | CCWWGG | 3 cut(s) | 259, 1037, 1658 |
| FaeI | CATG | 9 cut(s) | 335, 360, 993, 1202, 1277, 1427, 1600, 1787, 1811 |
| FatI | CATG | 9 cut(s) | 331, 356, 989, 1198, 1273, 1423, 1596, 1783, 1807 |
| FbaI | TGATCA | 1 cut(s) | 769 |
| Fnu4HI | GCNGC | 6 cut(s) | 215, 239, 759, 1085, 1088, 1664 |
| FokI | GGATG | 6 cut(s) | 62, 237, 317, 1459, 1466, 1635 |
| Fsp4HI | GCNGC | 6 cut(s) | 215, 239, 759, 1085, 1088, 1664 |
| FspBI | CTAG | 3 cut(s) | 374, 534, 786 |
| GluI | GCNGC | 6 cut(s) | 215, 239, 759, 1085, 1088, 1664 |
| GsaI | CCCAGC | 2 cut(s) | 1688, 1870 |
| GsuI | CTGGAG | 1 cut(s) | 438 |
| HaeIII | GGCC | 1 cut(s) | 238 |
| HapII | CCGG | 1 cut(s) | 1119 |
| HgaI | GACGC | 1 cut(s) | 877 |
| Hin1I | GRCGYC | 1 cut(s) | 502 |
| Hin1II | CATG | 9 cut(s) | 335, 360, 993, 1202, 1277, 1427, 1600, 1787, 1811 |
| HpaII | CCGG | 1 cut(s) | 1119 |
| HphI | GGTGA | 4 cut(s) | 28, 218, 1477, 1819 |
| Hpy166II | GTNNAC | 1 cut(s) | 548 |
| Hpy188III | TCNNGA | 7 cut(s) | 177, 290, 374, 557, 883, 952, 1255 |
| Hpy8I | GTNNAC | 1 cut(s) | 548 |
| HpyAV | CCTTC | 9 cut(s) | 17, 512, 775, 1200, 1204, 1275, 1279, 1350, 1425 |
| HpyCH4III | ACNGT | 5 cut(s) | 109, 1015, 1241, 1625, 1831 |
| HpyCH4IV | ACGT | 2 cut(s) | 502, 898 |
| HpyCH4V | TGCA | 9 cut(s) | 44, 83, 143, 335, 350, 482, 1001, 1600, 1807 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 488, 1881 |
| HpyF3I | CTNAG | 8 cut(s) | 675, 792, 840, 1155, 1305, 1461, 1568, 1790 |
| HpySE526I | ACGT | 2 cut(s) | 502, 898 |
| Hsp92I | GRCGYC | 1 cut(s) | 502 |
| Hsp92II | CATG | 9 cut(s) | 335, 360, 993, 1202, 1277, 1427, 1600, 1787, 1811 |
| Ksp22I | TGATCA | 1 cut(s) | 769 |
| LguI | GCTCTTC | 1 cut(s) | 1806 |
| LmnI | GCTCC | 4 cut(s) | 9, 43, 629, 1889 |
| Lsp1109I | GCAGC | 4 cut(s) | 745, 1071, 1074, 1675 |
| LweI | GCATC | 2 cut(s) | 1372, 1447 |
| MabI | ACCWGGT | 1 cut(s) | 12 |
| MaeI | CTAG | 3 cut(s) | 374, 534, 786 |
| MaeII | ACGT | 2 cut(s) | 502, 898 |
| MaeIII | GTNAC | 2 cut(s) | 103, 1180 |
| MfeI | CAATTG | 1 cut(s) | 66 |
| MflI | RGATCY | 4 cut(s) | 788, 1337, 1412, 1564 |
| MhlI | GDGCHC | 3 cut(s) | 75, 626, 1886 |
| MlyI | GAGTC | 4 cut(s) | 684, 1166, 1316, 1391 |
| MmeI | TCCRAC | 1 cut(s) | 1483 |
| Mph1103I | ATGCAT | 1 cut(s) | 1602 |
| MslI | CAYNNNNRTG | 2 cut(s) | 231, 1832 |
| MspI | CCGG | 1 cut(s) | 1119 |
| MspR9I | CCNGG | 4 cut(s) | 14, 456, 1050, 1120 |
| MunI | CAATTG | 1 cut(s) | 66 |
| Mva1269I | GAATGC | 2 cut(s) | 145, 217 |
| MvaI | CCWGG | 3 cut(s) | 14, 456, 1050 |
| MvnI | CGCG | 1 cut(s) | 241 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 488, 1881 |
| NciI | CCSGG | 1 cut(s) | 1120 |
| NlaIII | CATG | 9 cut(s) | 335, 360, 993, 1202, 1277, 1427, 1600, 1787, 1811 |
| NlaIV | GGNNCC | 2 cut(s) | 510, 1839 |
| NmuCI | GTSAC | 1 cut(s) | 1180 |
| NsiI | ATGCAT | 1 cut(s) | 1602 |
| NspI | RCATGY | 1 cut(s) | 1600 |
| NspV | TTCGAA | 1 cut(s) | 889 |
| OliI | CACNNNNGTG | 2 cut(s) | 231, 1832 |
| PciSI | GCTCTTC | 1 cut(s) | 1806 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 238, 895, 1253 |
| PctI | GAATGC | 2 cut(s) | 145, 217 |
| PfeI | GAWTC | 6 cut(s) | 29, 701, 848, 886, 1115, 1757 |
| PflFI | GACNNNGTC | 2 cut(s) | 826, 871 |
| PkrI | GCNGC | 6 cut(s) | 216, 240, 760, 1086, 1089, 1665 |
| PleI | GAGTC | 4 cut(s) | 684, 1165, 1315, 1390 |
| PpsI | GAGTC | 4 cut(s) | 684, 1165, 1315, 1390 |
| PshBI | ATTAAT | 1 cut(s) | 915 |
| Psp6I | CCWGG | 3 cut(s) | 12, 454, 1048 |
| PspFI | CCCAGC | 2 cut(s) | 1684, 1866 |
| PspGI | CCWGG | 3 cut(s) | 12, 454, 1048 |
| PspN4I | GGNNCC | 2 cut(s) | 510, 1839 |
| PspPI | GGNCC | 2 cut(s) | 236, 410 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 930, 962, 1663, 1695 |
| PstNI | CAGNNNCTG | 1 cut(s) | 839 |
| PsuI | RGATCY | 4 cut(s) | 788, 1337, 1412, 1564 |
| PsyI | GACNNNGTC | 2 cut(s) | 826, 871 |
| RsaI | GTAC | 4 cut(s) | 526, 1034, 1770, 1788 |
| RsaNI | GTAC | 4 cut(s) | 525, 1033, 1769, 1787 |
| RseI | CAYNNNNRTG | 2 cut(s) | 231, 1832 |
| SapI | GCTCTTC | 1 cut(s) | 1806 |
| SatI | GCNGC | 6 cut(s) | 215, 239, 759, 1085, 1088, 1664 |
| Sau96I | GGNCC | 2 cut(s) | 236, 410 |
| SchI | GAGTC | 4 cut(s) | 684, 1166, 1316, 1391 |
| ScrFI | CCNGG | 4 cut(s) | 14, 456, 1050, 1120 |
| SduI | GDGCHC | 3 cut(s) | 75, 626, 1886 |
| SexAI | ACCWGGT | 1 cut(s) | 12 |
| SfaNI | GCATC | 2 cut(s) | 1372, 1447 |
| SfcI | CTRYAG | 2 cut(s) | 762, 1096 |
| SfuI | TTCGAA | 1 cut(s) | 889 |
| SinI | GGWCC | 1 cut(s) | 410 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 231, 1832 |
| SsiI | CCGC | 3 cut(s) | 214, 239, 491 |
| SspI | AATATT | 1 cut(s) | 745 |
| SspMI | CTAG | 3 cut(s) | 374, 534, 786 |
| StyD4I | CCNGG | 4 cut(s) | 12, 454, 1048, 1118 |
| StyI | CCWWGG | 3 cut(s) | 259, 1037, 1658 |
| TaaI | ACNGT | 5 cut(s) | 109, 1015, 1241, 1625, 1831 |
| TaiI | ACGT | 2 cut(s) | 505, 901 |
| TaqI | TCGA | 5 cut(s) | 889, 1204, 1279, 1354, 1429 |
| TaqII | GACCGA | 1 cut(s) | 438 |
| TatI | WGTACW | 2 cut(s) | 1768, 1786 |
| TauI | GCSGC | 2 cut(s) | 217, 241 |
| TfiI | GAWTC | 6 cut(s) | 29, 701, 848, 886, 1115, 1757 |
| TscAI | CASTG | 7 cut(s) | 51, 613, 779, 840, 1018, 1246, 1620 |
| TseFI | GTSAC | 1 cut(s) | 1180 |
| TseI | GCWGC | 4 cut(s) | 758, 1084, 1087, 1663 |
| Tsp45I | GTSAC | 1 cut(s) | 1180 |
| TspGWI | ACGGA | 2 cut(s) | 616, 1619 |
| TspRI | CASTG | 7 cut(s) | 51, 613, 779, 840, 1018, 1246, 1620 |
| Tth111I | GACNNNGTC | 2 cut(s) | 826, 871 |
| VpaK11BI | GGWCC | 1 cut(s) | 410 |
| VspI | ATTAAT | 1 cut(s) | 915 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 11, 258 |
| XapI | RAATTY | 4 cut(s) | 404, 878, 1055, 1136 |
| XbaI | TCTAGA | 1 cut(s) | 373 |
| XceI | RCATGY | 1 cut(s) | 1600 |
| XspI | CTAG | 3 cut(s) | 374, 534, 786 |
| ZraI | GACGTC | 1 cut(s) | 503 |
| Zsp2I | ATGCAT | 1 cut(s) | 1602 |