FvH4_6g21990

Activator of 90 kDa heat shock protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
15674598 .. 15676562
1965 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g21990.t1

Sequence Viewer

Length: 1044 bp
ATGGCAAAGTACGGCGAGGGCGACAAGCGGTGGATCGTGGAGGACAGGCCCGACGGAGCCAACGTGCACAACTGGCACTGGGCCGAGACCGATTGCCTCGCCTGGTCACGTGACCTGCTCACCAAGCTTCTCTCCAACCTCACCATCCTCGACGGCGAGGGCGACCTCTTCGTCAAGACCAAAAAAGTCGACAAGGTCGAAGGCGACGCTTACGTCAACATCCGCAAAGGGAAAATCATCCCCGGCTACGAAATCAGCGTCACTCTCTCCTGGGAAGGCGAGGCCAGAGACGCCGACGGCAAGTCGCTGCTCAAGGTCGACGGCGCCGTCGAGATTCCCTACATCGCCGACGAGAATGCCGACGAGGATCCCGAGGTTAAGGTCACGGTCAAGGACGAGGGGCCGATTGGGAGGAGGATTAAGGAGGCGATGGTGGCGAAAGGGAAGCCGGTGATTTTGGAGAAGGTTAGGGTTTATGTGAAGAGTATGGCGCAGGGTGGGCCGGCTAAGGATGAGGCCGAGGCGAAGAAGATTGCGCCCAAGAGTAACTCGACGAGCTCCGTGGCGGCGGTGAAGAAGGAGGTTGTGGTGGAGAAGAAGGAGGTGAAGAAGGAGGGGAAGAAAGGGTTTAAGACTATTAGTATGACTGAGAAGTTTAGCTGCAGGGCGAGTAATTTGTATGAGATTTTGATGGATGAGAATAGGTGGAAGGGGTTTACCCAGAGCAATGCTAAGATAAGTAAGGAGGTTGGAGGGGAGTTTAGTATTTTCGATGGCTCCGTGACAGGGAAGAATTTGGAGTTGCAGAATGGGAAGTTGATTGTGCAGAATTGGAGATTTGGGAATTGGCCTGATGGCATTCAGTCAAAGGTGACACTTGCAATGGACGAGCCTGAACCTGGTCTTACTGTTGTAAAGCTAACCCATGTGGACATTCCTGAGGAAGACAGATATGGGAATGCCACTGTGGTAGAGAATACTGAGAGAGGATGGCGAGATCTTATCTTCCAGAGGATAAGGGCAGTTTTTGGATTTGGAATTTAA

Protein Analysis

348

Amino Acids

38.68

Weight (kDa)

6.13

Isoelectric Point (pI)

19.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aha1_N PF09229 29 - 165 8.2e-34 Activator of Hsp90 ATPase, N-terminal
AHSA1 PF08327 223 - 343 5.6e-13 Activator of Hsp90 ATPase homolog 1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 170, 212, 326
Acc36I ACCTGC 1 cut(s) 123
AccB1I GGYRCC 1 cut(s) 323
AccI GTMKAC 2 cut(s) 189, 318
AciI CCGC 4 cut(s) 28, 223, 566, 569
AclWI GGATC 3 cut(s) 41, 362, 375
AcsI RAATTY 2 cut(s) 793, 1038
AcvI CACGTG 1 cut(s) 110
AcyI GRCGYC 2 cut(s) 291, 324
AfaI GTAC 1 cut(s) 11
AfiI CCNNNNNNNGG 2 cut(s) 786, 899
AhdI GACNNNNNGTC 1 cut(s) 301
AjnI CCWGG 3 cut(s) 101, 269, 898
AluBI AGCT 4 cut(s) 127, 558, 660, 919
AluI AGCT 4 cut(s) 127, 558, 660, 919
Alw21I GWGCWC 2 cut(s) 69, 560
Alw26I GTCTC 2 cut(s) 80, 282
Alw44I GTGCAC 1 cut(s) 65
AlwI GGATC 3 cut(s) 41, 362, 375
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 7 cut(s) 47, 81, 282, 401, 500, 516, 848
ApaLI GTGCAC 1 cut(s) 65
ApeKI GCWGC 2 cut(s) 307, 660
ApoI RAATTY 2 cut(s) 793, 1038
ArsI GACNNNNNNTTYG 2 cut(s) 243, 275
AspLEI GCGC 3 cut(s) 326, 493, 538
AspS9I GGNCC 4 cut(s) 48, 81, 401, 500
AsuC2I CCSGG 1 cut(s) 243
AsuHPI GGTGA 6 cut(s) 112, 133, 463, 583, 616, 883
AvaI CYCGRG 1 cut(s) 371
AxyI CCTNAGG 1 cut(s) 939
BaeGI GKGCMC 1 cut(s) 69
BamHI GGATCC 1 cut(s) 367
BanI GGYRCC 1 cut(s) 323
BanII GRGCYC 1 cut(s) 560
BbrPI CACGTG 1 cut(s) 110
BbsI GAAGAC 1 cut(s) 951
Bbv12I GWGCWC 2 cut(s) 69, 560
BbvI GCAGC 2 cut(s) 294, 647
BccI CCATC 6 cut(s) 152, 424, 685, 767, 848, 984
BceAI ACGGC 5 cut(s) 28, 169, 311, 313, 337
BcgI CGANNNNNNTGC 2 cut(s) 338, 372
BciT130I CCWGG 3 cut(s) 103, 271, 900
BcnI CCSGG 1 cut(s) 243
BcoDI GTCTC 2 cut(s) 80, 282
BfmI CTRYAG 1 cut(s) 661
BfoI RGCGCY 1 cut(s) 327
BfuAI ACCTGC 1 cut(s) 123
BglII AGATCT 1 cut(s) 997
BisI GCNGC 3 cut(s) 308, 567, 661
BlsI GCNGC 3 cut(s) 309, 568, 662
Bme1390I CCNGG 4 cut(s) 103, 243, 271, 900
BmeRI GACNNNNNGTC 1 cut(s) 301
BmeT110I CYCGRG 1 cut(s) 371
BmgT120I GGNCC 4 cut(s) 48, 81, 401, 500
BmiI GGNNCC 5 cut(s) 58, 325, 369, 402, 778
BmrFI CCNGG 4 cut(s) 103, 243, 271, 900
BmrI ACTGGG 1 cut(s) 88
BmuI ACTGGG 1 cut(s) 88
BpiI GAAGAC 1 cut(s) 951
Bpu10I CCTNAGC 1 cut(s) 507
BpuEI CTTGAG 1 cut(s) 296
BpuMI CCSGG 1 cut(s) 243
BsaAI YACGTR 1 cut(s) 110
BsaHI GRCGYC 2 cut(s) 291, 324
BsaI GGTCTC 1 cut(s) 80
BsaJI CCNNGG 5 cut(s) 241, 270, 372, 519, 561
BsaXI ACNNNNNCTCC 2 cut(s) 48, 78
Bsc4I CCNNNNNNNGG 2 cut(s) 786, 899
Bse118I RCCGGY 2 cut(s) 448, 502
Bse1I ACTGG 2 cut(s) 77, 83
Bse21I CCTNAGG 1 cut(s) 939
Bse3DI GCAATG 2 cut(s) 733, 888
BseBI CCWGG 3 cut(s) 103, 271, 900
BseDI CCNNGG 5 cut(s) 241, 270, 372, 519, 561
BseGI GGATG 6 cut(s) 144, 219, 237, 517, 700, 995
BseLI CCNNNNNNNGG 2 cut(s) 786, 899
BseMI GCAATG 2 cut(s) 733, 888
BseMII CTCAG 3 cut(s) 639, 930, 972
BseNI ACTGG 2 cut(s) 77, 83
BseRI GAGGAG 1 cut(s) 427
BseSI GKGCMC 1 cut(s) 69
BseXI GCAGC 2 cut(s) 294, 647
BsgI GTGCAG 1 cut(s) 845
BshFI GGCC 7 cut(s) 49, 83, 284, 403, 502, 518, 850
BshNI GGYRCC 1 cut(s) 323
BsiHKAI GWGCWC 2 cut(s) 69, 560
BsiHKCI CYCGRG 1 cut(s) 371
BsiSI CCGG 3 cut(s) 243, 449, 503
BslI CCNNNNNNNGG 2 cut(s) 786, 899
BsmAI GTCTC 2 cut(s) 80, 282
BsmBI CGTCTC 1 cut(s) 282
BsmI GAATGC 3 cut(s) 361, 858, 964
BsnI GGCC 7 cut(s) 49, 83, 284, 403, 502, 518, 850
Bso31I GGTCTC 1 cut(s) 80
BsoBI CYCGRG 1 cut(s) 371
Bsp1286I GDGCHC 2 cut(s) 69, 560
Bsp143I GATC 3 cut(s) 33, 367, 997
BspACI CCGC 4 cut(s) 28, 223, 566, 569
BspANI GGCC 7 cut(s) 49, 83, 284, 403, 502, 518, 850
BspCNI CTCAG 3 cut(s) 640, 931, 973
BspLI GGNNCC 5 cut(s) 58, 325, 369, 402, 778
BspMAI CTGCAG 1 cut(s) 665
BspMI ACCTGC 1 cut(s) 123
BspPI GGATC 3 cut(s) 41, 362, 375
BspT107I GGYRCC 1 cut(s) 323
BspTNI GGTCTC 1 cut(s) 80
BsrDI GCAATG 2 cut(s) 733, 888
BsrFI RCCGGY 2 cut(s) 448, 502
BsrI ACTGG 2 cut(s) 77, 83
BssAI RCCGGY 2 cut(s) 448, 502
BssECI CCNNGG 5 cut(s) 241, 270, 372, 519, 561
BssMI GATC 3 cut(s) 33, 367, 997
BssNI GRCGYC 2 cut(s) 291, 324
Bst2UI CCWGG 3 cut(s) 103, 271, 900
Bst4CI ACNGT 3 cut(s) 388, 910, 967
Bst6I CTCTTC 2 cut(s) 173, 476
BstACI GRCGYC 2 cut(s) 291, 324
BstBAI YACGTR 1 cut(s) 110
BstC8I GCNNGC 1 cut(s) 504
BstDEI CTNAG 5 cut(s) 507, 648, 732, 939, 981
BstDSI CCRYGG 1 cut(s) 561
BstF5I GGATG 6 cut(s) 144, 219, 237, 517, 700, 995
BstH2I RGCGCY 1 cut(s) 327
BstHHI GCGC 3 cut(s) 326, 493, 538
BstKTI GATC 3 cut(s) 36, 370, 1000
BstMAI GTCTC 2 cut(s) 80, 282
BstMBI GATC 3 cut(s) 33, 367, 997
BstMWI GCNNNNNNNGC 5 cut(s) 73, 124, 290, 434, 499
BstNI CCWGG 3 cut(s) 103, 271, 900
BstSCI CCNGG 4 cut(s) 101, 241, 269, 898
BstSFI CTRYAG 1 cut(s) 661
BstSLI GKGCMC 1 cut(s) 69
BstV1I GCAGC 2 cut(s) 294, 647
BstV2I GAAGAC 1 cut(s) 951
BstX2I RGATCY 2 cut(s) 367, 997
BstYI RGATCY 2 cut(s) 367, 997
Bsu36I CCTNAGG 1 cut(s) 939
BsuRI GGCC 7 cut(s) 49, 83, 284, 403, 502, 518, 850
BtgI CCRYGG 1 cut(s) 561
BtgZI GCGATG 2 cut(s) 328, 443
BtsCI GGATG 6 cut(s) 144, 219, 237, 517, 700, 995
BtsIMutI CAGTG 2 cut(s) 76, 963
BveI ACCTGC 1 cut(s) 123
Cac8I GCNNGC 1 cut(s) 504
CfoI GCGC 3 cut(s) 326, 493, 538
Cfr10I RCCGGY 2 cut(s) 448, 502
Cfr13I GGNCC 4 cut(s) 48, 81, 401, 500
CseI GACGC 3 cut(s) 215, 247, 299
CsiI ACCWGGT 1 cut(s) 898
Csp6I GTAC 1 cut(s) 10
CviAII CATG 1 cut(s) 926
CviQI GTAC 1 cut(s) 10
DdeI CTNAG 5 cut(s) 507, 648, 732, 939, 981
DinI GGCGCC 1 cut(s) 325
DpnI GATC 3 cut(s) 35, 369, 999
DpnII GATC 3 cut(s) 33, 367, 997
DrdI GACNNNNNNGTC 3 cut(s) 170, 212, 326
DriI GACNNNNNGTC 1 cut(s) 301
DseDI GACNNNNNNGTC 3 cut(s) 170, 212, 326
Eam1104I CTCTTC 2 cut(s) 173, 476
Eam1105I GACNNNNNGTC 1 cut(s) 301
EarI CTCTTC 2 cut(s) 173, 476
Ecl136II GAGCTC 1 cut(s) 558
Eco24I GRGCYC 1 cut(s) 560
Eco31I GGTCTC 1 cut(s) 80
Eco53kI GAGCTC 1 cut(s) 558
Eco72I CACGTG 1 cut(s) 110
Eco81I CCTNAGG 1 cut(s) 939
Eco88I CYCGRG 1 cut(s) 371
EcoICRI GAGCTC 1 cut(s) 558
EcoRII CCWGG 3 cut(s) 101, 269, 898
EcoT38I GRGCYC 1 cut(s) 560
EgeI GGCGCC 1 cut(s) 325
EheI GGCGCC 1 cut(s) 325
Esp3I CGTCTC 1 cut(s) 282
FaeI CATG 1 cut(s) 929
FaiI YATR 6 cut(s) 477, 488, 644, 681, 927, 954
FatI CATG 1 cut(s) 925
FblI GTMKAC 2 cut(s) 189, 318
Fnu4HI GCNGC 3 cut(s) 308, 567, 661
FokI GGATG 6 cut(s) 131, 206, 224, 524, 707, 1002
FriOI GRGCYC 1 cut(s) 560
Fsp4HI GCNGC 3 cut(s) 308, 567, 661
GlaI GCGC 3 cut(s) 325, 492, 537
GluI GCNGC 3 cut(s) 308, 567, 661
HaeII RGCGCY 1 cut(s) 327
HaeIII GGCC 7 cut(s) 49, 83, 284, 403, 502, 518, 850
HapII CCGG 3 cut(s) 243, 449, 503
HgaI GACGC 3 cut(s) 215, 247, 299
HhaI GCGC 3 cut(s) 326, 493, 538
Hin1I GRCGYC 2 cut(s) 291, 324
Hin1II CATG 1 cut(s) 929
Hin6I GCGC 3 cut(s) 324, 491, 536
HinP1I GCGC 3 cut(s) 324, 491, 536
HincII GTYRAC 3 cut(s) 190, 217, 319
HindII GTYRAC 3 cut(s) 190, 217, 319
HindIII AAGCTT 1 cut(s) 125
HinfI GANTC 1 cut(s) 334
HpaII CCGG 3 cut(s) 243, 449, 503
HphI GGTGA 6 cut(s) 112, 133, 463, 583, 616, 883
Hpy166II GTNNAC 6 cut(s) 67, 190, 217, 319, 717, 931
Hpy188III TCNNGA 5 cut(s) 175, 331, 371, 938, 1009
Hpy8I GTNNAC 6 cut(s) 67, 190, 217, 319, 717, 931
Hpy99I CGWCG 9 cut(s) 56, 155, 209, 299, 323, 332, 353, 365, 556
HpyAV CCTTC 7 cut(s) 194, 269, 457, 571, 592, 604, 703
HpyCH4III ACNGT 3 cut(s) 388, 910, 967
HpyCH4IV ACGT 3 cut(s) 63, 109, 213
HpyCH4V TGCA 5 cut(s) 67, 663, 805, 826, 881
HpyF10VI GCNNNNNNNGC 5 cut(s) 73, 124, 290, 434, 499
HpyF3I CTNAG 5 cut(s) 507, 648, 732, 939, 981
HpySE526I ACGT 3 cut(s) 63, 109, 213
Hsp92I GRCGYC 2 cut(s) 291, 324
Hsp92II CATG 1 cut(s) 929
HspAI GCGC 3 cut(s) 324, 491, 536
KasI GGCGCC 1 cut(s) 323
KroI GCCGGC 1 cut(s) 502
KroNI GCCGGC 1 cut(s) 504
Kzo9I GATC 3 cut(s) 33, 367, 997
LmnI GCTCC 3 cut(s) 56, 563, 782
Lsp1109I GCAGC 2 cut(s) 294, 647
MabI ACCWGGT 1 cut(s) 898
MaeII ACGT 3 cut(s) 63, 109, 213
MaeIII GTNAC 7 cut(s) 105, 110, 259, 382, 545, 781, 871
MalI GATC 3 cut(s) 35, 369, 999
MboI GATC 3 cut(s) 33, 367, 997
MflI RGATCY 2 cut(s) 367, 997
MhlI GDGCHC 2 cut(s) 69, 560
MluCI AATT 5 cut(s) 673, 793, 829, 844, 1038
Mly113I GGCGCC 1 cut(s) 324
MmeI TCCRAC 2 cut(s) 159, 730
MroNI GCCGGC 1 cut(s) 502
MseI TTAA 4 cut(s) 378, 420, 630, 1042
MspI CCGG 3 cut(s) 243, 449, 503
MspR9I CCNGG 4 cut(s) 103, 243, 271, 900
Mva1269I GAATGC 3 cut(s) 361, 858, 964
MvaI CCWGG 3 cut(s) 103, 271, 900
MwoI GCNNNNNNNGC 5 cut(s) 73, 124, 290, 434, 499
NaeI GCCGGC 1 cut(s) 504
NarI GGCGCC 1 cut(s) 324
NciI CCSGG 1 cut(s) 243
NdeII GATC 3 cut(s) 33, 367, 997
NgoMIV GCCGGC 1 cut(s) 502
NlaIII CATG 1 cut(s) 929
NlaIV GGNNCC 5 cut(s) 58, 325, 369, 402, 778
NmeAIII GCCGAG 2 cut(s) 109, 544
NmuCI GTSAC 6 cut(s) 105, 110, 259, 382, 781, 871
PctI GAATGC 3 cut(s) 361, 858, 964
PdiI GCCGGC 1 cut(s) 504
PfeI GAWTC 1 cut(s) 334
PflFI GACNNNGTC 1 cut(s) 194
PkrI GCNGC 3 cut(s) 309, 568, 662
PluTI GGCGCC 1 cut(s) 327
PmaCI CACGTG 1 cut(s) 110
PmlI CACGTG 1 cut(s) 110
Ppu21I YACGTR 1 cut(s) 110
Psp124BI GAGCTC 1 cut(s) 560
Psp6I CCWGG 3 cut(s) 101, 269, 898
PspCI CACGTG 1 cut(s) 110
PspGI CCWGG 3 cut(s) 101, 269, 898
PspN4I GGNNCC 5 cut(s) 58, 325, 369, 402, 778
PspPI GGNCC 4 cut(s) 48, 81, 401, 500
PstI CTGCAG 1 cut(s) 665
PsuI RGATCY 2 cut(s) 367, 997
PsyI GACNNNGTC 1 cut(s) 194
RsaI GTAC 1 cut(s) 11
RsaNI GTAC 1 cut(s) 10
SacI GAGCTC 1 cut(s) 560
SalI GTCGAC 2 cut(s) 188, 317
SaqAI TTAA 4 cut(s) 378, 420, 630, 1042
SatI GCNGC 3 cut(s) 308, 567, 661
Sau3AI GATC 3 cut(s) 33, 367, 997
Sau96I GGNCC 4 cut(s) 48, 81, 401, 500
ScrFI CCNGG 4 cut(s) 103, 243, 271, 900
SduI GDGCHC 2 cut(s) 69, 560
SexAI ACCWGGT 1 cut(s) 898
SfcI CTRYAG 1 cut(s) 661
SfoI GGCGCC 1 cut(s) 325
SmlI CTYRAG 1 cut(s) 311
SmoI CTYRAG 1 cut(s) 311
Sse9I AATT 5 cut(s) 673, 793, 829, 844, 1038
SsiI CCGC 4 cut(s) 28, 223, 566, 569
SspDI GGCGCC 1 cut(s) 323
SstI GAGCTC 1 cut(s) 560
StyD4I CCNGG 4 cut(s) 101, 241, 269, 898
TaaI ACNGT 3 cut(s) 388, 910, 967
TaiI ACGT 3 cut(s) 66, 112, 216
TaqI TCGA 7 cut(s) 150, 189, 198, 318, 330, 551, 771
TaqII GACCGA 1 cut(s) 104
TasI AATT 5 cut(s) 673, 793, 829, 844, 1038
TauI GCSGC 1 cut(s) 569
TfiI GAWTC 1 cut(s) 334
Tru1I TTAA 4 cut(s) 378, 420, 630, 1042
Tru9I TTAA 4 cut(s) 378, 420, 630, 1042
TscAI CASTG 2 cut(s) 83, 970
TseFI GTSAC 6 cut(s) 105, 110, 259, 382, 781, 871
TseI GCWGC 2 cut(s) 307, 660
Tsp45I GTSAC 6 cut(s) 105, 110, 259, 382, 781, 871
TspGWI ACGGA 3 cut(s) 69, 550, 769
TspRI CASTG 2 cut(s) 83, 970
Tth111I GACNNNGTC 1 cut(s) 194
VneI GTGCAC 1 cut(s) 65
XapI RAATTY 2 cut(s) 793, 1038
XmiI GTMKAC 2 cut(s) 189, 318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.