Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0009966

Physical Location & Seq

Genomic Coordinates Forward (+)

24489478 .. 24490734

Gene Structure 1257 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG249600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGGCGAAGTACGGCGAGGGCGACAAGCGGTGGATCGTGGAAGACAGACCCGACGGAGCGAACGTCCACAACTGGCACTGGGCCGAGACCGATTGCCTGGGCTGGTCACGTGACCTCCTCACCAAGCTCCTCTCCAACCTCACCATCCTCGACGGCGAAGGCGACCTCTTCATCAAGACCAACAAGGTCGACAAGGTCGAAGGCGACGCCTACGTCAACATTCGCAAGGGCAAGATCATCCCCGGCTACGAAATCAGCCTCAGTCTCTCCTGGGAGGGCGAGGCCAGAGACTCCGACGGCAAATCGCTGCTCAAGGTCGACGGCGCCGTCGAGATTCCCTACATCGCCGACGAGAATGCCGACGAGGACCCCGAGGTTAAGGTCTCGGTGAAGGACGAGGGCCCCATTGGGAGGAGGATTAAGGAGGCTATGGTGGCCAAGGGGAAGCCTGTGATTTTGGACAAGGTTAGGGTTTATGTGCAGAGTATGGCGCAGGGTGGGCCGGCCAAGGATGAGGCCGAGGCCAAGAAGATTGCGCCGAAGACTAATAATAATTCGACGAGTTCCGGGGCGGCGGTGAAGAAGGAGGTGGTGGTGGAGAAGAAGGAGGTGAAGAAGAAGGAGACCAAGAAAGGGTTTAAGACGATTAGTATGACTGAGAAGTTTAGCTGCAGGGCGAGTAATTTGTATGAGATTTTGATGGATGAGAATAGATGGAAGGGGTTTACTCAGAGCAATGCTAAGATAAGTAAAGAGGTTGGAGGAGAGTTTAGTATTTTCGATGGGTCGGTGACCGGTAGGAATTTGGAGCTGCAGAATGGCAAGTTGATTGTGCAGAATTGGAGATTTGGGAGTTGGCCTGATGGGATTGAGTCGAAGGTGACACTTACATTTGATGAGCCTGAACCTGGTCTAACAGTTGTCAAGCTAACCCATGTGGATGTTCCTGAGGAAGACAGATACGGGAATGCCACTGTGGTAGAGAATACTGAGAGAGGATGGCGGGATCTTATCTTTCAGAGGATAAGGGCAGTTTTTGGTTTCGGAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001671 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0008047 GO:0008150 GO:0030234 GO:0031072 GO:0032781 GO:0043085 GO:0043462 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0050790 GO:0051087 GO:0051336 GO:0051345 GO:0051879 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AHSA1 Aha1_N

Protein Analysis

350

Amino Acids

39.06

Weight (kDa)

5.73

Isoelectric Point (pI)

24.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aha1_N	PF09229	29 - 165	3.2e-33	Activator of Hsp90 ATPase, N-terminal
AHSA1	PF08327	226 - 346	9e-15	Activator of Hsp90 ATPase homolog 1-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009966)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12050 AT3G12050
fragaria_vesca	FvH4_6g21990
malus_domestica	MD12G1055300.v1.1 MD14G1054700.v1.1
prunus_persica	Prupe.7G080100_v2.0.a1 Prupe.7G080100_v2.0.a1 Prupe.7G080100_v2.0.a1
pyrus_communis	pycom12g04830 pycom14g04520
rosa_chinensis	RchiOBHm_Chr3g0479291
rosa_laevigata	RLG00000023586
rosa_multiflora	Rmu_sc0015378.1_g000002 Rmu_sc0026945.1_g000001
rosa_roxburghii	Rroxscaffold_6G00402430
rosa_rugosa	Rorug03G0174200
rosa_samantha	Rh3AG225200 Rh3BG257700 Rh3CG253400 Rh3DG249600
rosa_wichuraiana	Rw3G020140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	212, 326
AccB1I	GGYRCC	1 cut(s)	323
AccI	GTMKAC	2 cut(s)	189, 318
AciI	CCGC	4 cut(s)	28, 572, 575, 1003
AclWI	GGATC	2 cut(s)	41, 1014
AcoI	YGGCCR	2 cut(s)	435, 504
AcsI	RAATTY	2 cut(s)	802, 1047
AcvI	CACGTG	1 cut(s)	110
AcyI	GRCGYC	2 cut(s)	207, 324
AfaI	GTAC	1 cut(s)	11
AfiI	CCNNNNNNNGG	3 cut(s)	411, 633, 908
AgeI	ACCGGT	1 cut(s)	794
AjnI	CCWGG	3 cut(s)	96, 269, 907
AluBI	AGCT	4 cut(s)	127, 669, 811, 928
AluI	AGCT	4 cut(s)	127, 669, 811, 928
Alw26I	GTCTC	5 cut(s)	80, 269, 282, 388, 617
AlwI	GGATC	2 cut(s)	41, 1014
Ama87I	CYCGRG	1 cut(s)	371
AoxI	GGCC	9 cut(s)	81, 282, 400, 435, 500, 504, 516, 522, 857
ApaI	GGGCCC	1 cut(s)	404
ApeKI	GCWGC	3 cut(s)	307, 669, 811
ApoI	RAATTY	2 cut(s)	802, 1047
AsiGI	ACCGGT	1 cut(s)	794
AspLEI	GCGC	3 cut(s)	326, 493, 538
AspS9I	GGNCC	5 cut(s)	81, 367, 400, 401, 500
AsuC2I	CCSGG	2 cut(s)	243, 568
AsuHPI	GGTGA	7 cut(s)	112, 133, 400, 589, 622, 802, 892
AvaI	CYCGRG	1 cut(s)	371
AvaII	GGWCC	1 cut(s)	367
AxyI	CCTNAGG	1 cut(s)	948
BaeGI	GKGCMC	1 cut(s)	404
BalI	TGGCCA	1 cut(s)	437
BanI	GGYRCC	1 cut(s)	323
BanII	GRGCYC	1 cut(s)	404
BbrPI	CACGTG	1 cut(s)	110
BbsI	GAAGAC	3 cut(s)	48, 548, 960
BbvI	GCAGC	3 cut(s)	294, 656, 798
BccI	CCATC	6 cut(s)	152, 694, 708, 776, 857, 993
BceAI	ACGGC	5 cut(s)	28, 169, 311, 313, 337
BcgI	CGANNNNNNTGC	2 cut(s)	338, 372
BciT130I	CCWGG	3 cut(s)	98, 271, 909
BcnI	CCSGG	2 cut(s)	243, 568
BcoDI	GTCTC	5 cut(s)	80, 269, 282, 388, 617
BfmI	CTRYAG	2 cut(s)	670, 812
BfoI	RGCGCY	1 cut(s)	327
BisI	GCNGC	4 cut(s)	308, 573, 670, 812
BlsI	GCNGC	4 cut(s)	309, 574, 671, 813
Bme1390I	CCNGG	5 cut(s)	98, 243, 271, 568, 909
Bme18I	GGWCC	1 cut(s)	367
BmeT110I	CYCGRG	1 cut(s)	371
BmgT120I	GGNCC	5 cut(s)	81, 367, 400, 401, 500
BmiI	GGNNCC	4 cut(s)	325, 369, 402, 403
BmrFI	CCNGG	5 cut(s)	98, 243, 271, 568, 909
BmrI	ACTGGG	1 cut(s)	88
BmuI	ACTGGG	1 cut(s)	88
BpiI	GAAGAC	3 cut(s)	48, 548, 960
BpuEI	CTTGAG	1 cut(s)	296
BpuMI	CCSGG	2 cut(s)	243, 568
BsaAI	YACGTR	1 cut(s)	110
BsaHI	GRCGYC	2 cut(s)	207, 324
BsaI	GGTCTC	3 cut(s)	80, 388, 617
BsaJI	CCNNGG	8 cut(s)	97, 241, 270, 372, 438, 507, 519, 567
BsaWI	WCCGGW	1 cut(s)	794
BsaXI	ACNNNNNCTCC	4 cut(s)	48, 78, 99, 129
Bsc4I	CCNNNNNNNGG	3 cut(s)	411, 633, 908
Bse118I	RCCGGY	2 cut(s)	502, 794
Bse1I	ACTGG	2 cut(s)	77, 83
Bse21I	CCTNAGG	1 cut(s)	948
Bse3DI	GCAATG	1 cut(s)	742
BseBI	CCWGG	3 cut(s)	98, 271, 909
BseDI	CCNNGG	8 cut(s)	97, 241, 270, 372, 438, 507, 519, 567
BseGI	GGATG	6 cut(s)	144, 237, 517, 709, 946, 1004
BseLI	CCNNNNNNNGG	3 cut(s)	411, 633, 908
BseMI	GCAATG	1 cut(s)	742
BseMII	CTCAG	5 cut(s)	274, 648, 743, 939, 981
BseNI	ACTGG	2 cut(s)	77, 83
BseRI	GAGGAG	4 cut(s)	107, 119, 427, 777
BseSI	GKGCMC	1 cut(s)	404
BseXI	GCAGC	3 cut(s)	294, 656, 798
BsgI	GTGCAG	2 cut(s)	500, 854
BshFI	GGCC	9 cut(s)	83, 284, 402, 437, 502, 506, 518, 524, 859
BshNI	GGYRCC	1 cut(s)	323
BshTI	ACCGGT	1 cut(s)	794
BsiHKCI	CYCGRG	1 cut(s)	371
BsiSI	CCGG	4 cut(s)	243, 503, 567, 795
BslI	CCNNNNNNNGG	3 cut(s)	411, 633, 908
BsmAI	GTCTC	5 cut(s)	80, 269, 282, 388, 617
BsmI	GAATGC	2 cut(s)	361, 973
BsnI	GGCC	9 cut(s)	83, 284, 402, 437, 502, 506, 518, 524, 859
Bso31I	GGTCTC	3 cut(s)	80, 388, 617
BsoBI	CYCGRG	1 cut(s)	371
Bsp120I	GGGCCC	1 cut(s)	400
Bsp1286I	GDGCHC	1 cut(s)	404
Bsp143I	GATC	3 cut(s)	33, 234, 1006
BspACI	CCGC	4 cut(s)	28, 572, 575, 1003
BspANI	GGCC	9 cut(s)	83, 284, 402, 437, 502, 506, 518, 524, 859
BspCNI	CTCAG	5 cut(s)	273, 649, 742, 940, 982
BspLI	GGNNCC	4 cut(s)	325, 369, 402, 403
BspMAI	CTGCAG	2 cut(s)	674, 816
BspPI	GGATC	2 cut(s)	41, 1014
BspT107I	GGYRCC	1 cut(s)	323
BspTNI	GGTCTC	3 cut(s)	80, 388, 617
BsrDI	GCAATG	1 cut(s)	742
BsrFI	RCCGGY	2 cut(s)	502, 794
BsrI	ACTGG	2 cut(s)	77, 83
BssAI	RCCGGY	2 cut(s)	502, 794
BssECI	CCNNGG	8 cut(s)	97, 241, 270, 372, 438, 507, 519, 567
BssMI	GATC	3 cut(s)	33, 234, 1006
BssNI	GRCGYC	2 cut(s)	207, 324
BssT1I	CCWWGG	2 cut(s)	438, 507
Bst2UI	CCWGG	3 cut(s)	98, 271, 909
Bst4CI	ACNGT	2 cut(s)	919, 976
Bst6I	CTCTTC	1 cut(s)	173
BstACI	GRCGYC	2 cut(s)	207, 324
BstBAI	YACGTR	1 cut(s)	110
BstC8I	GCNNGC	1 cut(s)	504
BstDEI	CTNAG	6 cut(s)	260, 657, 729, 741, 948, 990
BstEII	GGTNACC	1 cut(s)	790
BstF5I	GGATG	6 cut(s)	144, 237, 517, 709, 946, 1004
BstH2I	RGCGCY	1 cut(s)	327
BstHHI	GCGC	3 cut(s)	326, 493, 538
BstKTI	GATC	3 cut(s)	36, 237, 1009
BstMAI	GTCTC	5 cut(s)	80, 269, 282, 388, 617
BstMBI	GATC	3 cut(s)	33, 234, 1006
BstMWI	GCNNNNNNNGC	2 cut(s)	434, 499
BstNI	CCWGG	3 cut(s)	98, 271, 909
BstPI	GGTNACC	1 cut(s)	790
BstSCI	CCNGG	5 cut(s)	96, 241, 269, 566, 907
BstSFI	CTRYAG	2 cut(s)	670, 812
BstSLI	GKGCMC	1 cut(s)	404
BstV1I	GCAGC	3 cut(s)	294, 656, 798
BstV2I	GAAGAC	3 cut(s)	48, 548, 960
BstX2I	RGATCY	1 cut(s)	1006
BstYI	RGATCY	1 cut(s)	1006
Bsu36I	CCTNAGG	1 cut(s)	948
BsuRI	GGCC	9 cut(s)	83, 284, 402, 437, 502, 506, 518, 524, 859
BtgZI	GCGATG	1 cut(s)	328
BtsCI	GGATG	6 cut(s)	144, 237, 517, 709, 946, 1004
BtsIMutI	CAGTG	2 cut(s)	76, 972
Cac8I	GCNNGC	1 cut(s)	504
CfoI	GCGC	3 cut(s)	326, 493, 538
Cfr10I	RCCGGY	2 cut(s)	502, 794
Cfr13I	GGNCC	5 cut(s)	81, 367, 400, 401, 500
CseI	GACGC	1 cut(s)	215
CsiI	ACCWGGT	1 cut(s)	907
Csp6I	GTAC	1 cut(s)	10
CspAI	ACCGGT	1 cut(s)	794
CviAII	CATG	1 cut(s)	935
CviQI	GTAC	1 cut(s)	10
DdeI	CTNAG	6 cut(s)	260, 657, 729, 741, 948, 990
DinI	GGCGCC	1 cut(s)	325
DpnI	GATC	3 cut(s)	35, 236, 1008
DpnII	GATC	3 cut(s)	33, 234, 1006
DrdI	GACNNNNNNGTC	2 cut(s)	212, 326
DseDI	GACNNNNNNGTC	2 cut(s)	212, 326
EaeI	YGGCCR	2 cut(s)	435, 504
Eam1104I	CTCTTC	1 cut(s)	173
EarI	CTCTTC	1 cut(s)	173
Eco130I	CCWWGG	2 cut(s)	438, 507
Eco24I	GRGCYC	1 cut(s)	404
Eco31I	GGTCTC	3 cut(s)	80, 388, 617
Eco47I	GGWCC	1 cut(s)	367
Eco72I	CACGTG	1 cut(s)	110
Eco81I	CCTNAGG	1 cut(s)	948
Eco88I	CYCGRG	1 cut(s)	371
Eco91I	GGTNACC	1 cut(s)	790
EcoO109I	RGGNCCY	3 cut(s)	367, 400, 401
EcoO65I	GGTNACC	1 cut(s)	790
EcoRII	CCWGG	3 cut(s)	96, 269, 907
EcoT14I	CCWWGG	2 cut(s)	438, 507
EcoT38I	GRGCYC	1 cut(s)	404
EgeI	GGCGCC	1 cut(s)	325
EheI	GGCGCC	1 cut(s)	325
ErhI	CCWWGG	2 cut(s)	438, 507
FaeI	CATG	1 cut(s)	938
FaiI	YATR	6 cut(s)	431, 477, 488, 653, 690, 936
FatI	CATG	1 cut(s)	934
FauI	CCCGC	1 cut(s)	996
FblI	GTMKAC	2 cut(s)	189, 318
Fnu4HI	GCNGC	4 cut(s)	308, 573, 670, 812
FokI	GGATG	6 cut(s)	131, 224, 524, 716, 953, 1011
FriOI	GRGCYC	1 cut(s)	404
FseI	GGCCGGCC	1 cut(s)	506
Fsp4HI	GCNGC	4 cut(s)	308, 573, 670, 812
GlaI	GCGC	3 cut(s)	325, 492, 537
GluI	GCNGC	4 cut(s)	308, 573, 670, 812
HaeII	RGCGCY	1 cut(s)	327
HaeIII	GGCC	9 cut(s)	83, 284, 402, 437, 502, 506, 518, 524, 859
HapII	CCGG	4 cut(s)	243, 503, 567, 795
HgaI	GACGC	1 cut(s)	215
HhaI	GCGC	3 cut(s)	326, 493, 538
Hin1I	GRCGYC	2 cut(s)	207, 324
Hin1II	CATG	1 cut(s)	938
Hin6I	GCGC	3 cut(s)	324, 491, 536
HinP1I	GCGC	3 cut(s)	324, 491, 536
HincII	GTYRAC	3 cut(s)	190, 217, 319
HindII	GTYRAC	3 cut(s)	190, 217, 319
HinfI	GANTC	3 cut(s)	290, 334, 872
HpaII	CCGG	4 cut(s)	243, 503, 567, 795
HphI	GGTGA	7 cut(s)	112, 133, 400, 589, 622, 802, 892
Hpy166II	GTNNAC	5 cut(s)	67, 190, 217, 319, 726
Hpy188I	TCNGA	4 cut(s)	295, 732, 1020, 1046
Hpy188III	TCNNGA	3 cut(s)	175, 331, 947
Hpy8I	GTNNAC	5 cut(s)	67, 190, 217, 319, 726
Hpy99I	CGWCG	9 cut(s)	56, 155, 209, 299, 323, 332, 353, 365, 562
HpyAV	CCTTC	8 cut(s)	152, 194, 385, 577, 598, 613, 712, 871
HpyCH4III	ACNGT	2 cut(s)	919, 976
HpyCH4IV	ACGT	3 cut(s)	63, 109, 213
HpyCH4V	TGCA	4 cut(s)	481, 672, 814, 835
HpyF10VI	GCNNNNNNNGC	2 cut(s)	434, 499
HpyF3I	CTNAG	6 cut(s)	260, 657, 729, 741, 948, 990
HpySE526I	ACGT	3 cut(s)	63, 109, 213
Hsp92I	GRCGYC	2 cut(s)	207, 324
Hsp92II	CATG	1 cut(s)	938
HspAI	GCGC	3 cut(s)	324, 491, 536
KasI	GGCGCC	1 cut(s)	323
KroI	GCCGGC	1 cut(s)	502
KroNI	GCCGGC	1 cut(s)	504
Kzo9I	GATC	3 cut(s)	33, 234, 1006
LmnI	GCTCC	3 cut(s)	56, 132, 808
Lsp1109I	GCAGC	3 cut(s)	294, 656, 798
MabI	ACCWGGT	1 cut(s)	907
MaeII	ACGT	3 cut(s)	63, 109, 213
MaeIII	GTNAC	4 cut(s)	105, 110, 790, 880
MalI	GATC	3 cut(s)	35, 236, 1008
MboI	GATC	3 cut(s)	33, 234, 1006
MboII	GAAGA	9 cut(s)	53, 160, 541, 553, 592, 613, 625, 628, 965
MflI	RGATCY	1 cut(s)	1006
MhlI	GDGCHC	1 cut(s)	404
MlsI	TGGCCA	1 cut(s)	437
MluCI	AATT	5 cut(s)	553, 682, 802, 838, 1047
MluNI	TGGCCA	1 cut(s)	437
Mly113I	GGCGCC	1 cut(s)	324
MlyI	GAGTC	2 cut(s)	284, 881
MmeI	TCCRAC	3 cut(s)	159, 318, 739
Mox20I	TGGCCA	1 cut(s)	437
MroNI	GCCGGC	1 cut(s)	502
MscI	TGGCCA	1 cut(s)	437
MseI	TTAA	4 cut(s)	378, 420, 639, 1051
MslI	CAYNNNNRTG	1 cut(s)	939
Msp20I	TGGCCA	1 cut(s)	437
MspI	CCGG	4 cut(s)	243, 503, 567, 795
MspR9I	CCNGG	5 cut(s)	98, 243, 271, 568, 909
Mva1269I	GAATGC	2 cut(s)	361, 973
MvaI	CCWGG	3 cut(s)	98, 271, 909
MwoI	GCNNNNNNNGC	2 cut(s)	434, 499
NaeI	GCCGGC	1 cut(s)	504
NarI	GGCGCC	1 cut(s)	324
NciI	CCSGG	2 cut(s)	243, 568
NdeII	GATC	3 cut(s)	33, 234, 1006
NgoMIV	GCCGGC	1 cut(s)	502
NlaIII	CATG	1 cut(s)	938
NlaIV	GGNNCC	4 cut(s)	325, 369, 402, 403
NmeAIII	GCCGAG	2 cut(s)	109, 544
NmuCI	GTSAC	4 cut(s)	105, 110, 790, 880
PcsI	WCGNNNNNNNCGW	8 cut(s)	18, 60, 159, 195, 324, 327, 357, 369
PctI	GAATGC	2 cut(s)	361, 973
PdiI	GCCGGC	1 cut(s)	504
PfeI	GAWTC	1 cut(s)	334
PflFI	GACNNNGTC	1 cut(s)	194
PinAI	ACCGGT	1 cut(s)	794
PkrI	GCNGC	4 cut(s)	309, 574, 671, 813
PleI	GAGTC	2 cut(s)	284, 880
PluTI	GGCGCC	1 cut(s)	327
PmaCI	CACGTG	1 cut(s)	110
PmlI	CACGTG	1 cut(s)	110
PpsI	GAGTC	2 cut(s)	284, 880
Ppu21I	YACGTR	1 cut(s)	110
PpuMI	RGGWCCY	1 cut(s)	367
Psp5II	RGGWCCY	1 cut(s)	367
Psp6I	CCWGG	3 cut(s)	96, 269, 907
PspCI	CACGTG	1 cut(s)	110
PspEI	GGTNACC	1 cut(s)	790
PspGI	CCWGG	3 cut(s)	96, 269, 907
PspN4I	GGNNCC	4 cut(s)	325, 369, 402, 403
PspOMI	GGGCCC	1 cut(s)	400
PspPI	GGNCC	5 cut(s)	81, 367, 400, 401, 500
PspPPI	RGGWCCY	1 cut(s)	367
PstI	CTGCAG	2 cut(s)	674, 816
PsuI	RGATCY	1 cut(s)	1006
PsyI	GACNNNGTC	1 cut(s)	194
RigI	GGCCGGCC	1 cut(s)	506
RsaI	GTAC	1 cut(s)	11
RsaNI	GTAC	1 cut(s)	10
RseI	CAYNNNNRTG	1 cut(s)	939
SalI	GTCGAC	2 cut(s)	188, 317
SaqAI	TTAA	4 cut(s)	378, 420, 639, 1051
SatI	GCNGC	4 cut(s)	308, 573, 670, 812
Sau3AI	GATC	3 cut(s)	33, 234, 1006
Sau96I	GGNCC	5 cut(s)	81, 367, 400, 401, 500
SchI	GAGTC	2 cut(s)	284, 881
ScrFI	CCNGG	5 cut(s)	98, 243, 271, 568, 909
SduI	GDGCHC	1 cut(s)	404
SexAI	ACCWGGT	1 cut(s)	907
SfcI	CTRYAG	2 cut(s)	670, 812
SfoI	GGCGCC	1 cut(s)	325
SinI	GGWCC	1 cut(s)	367
SmiMI	CAYNNNNRTG	1 cut(s)	939
SmlI	CTYRAG	1 cut(s)	311
SmoI	CTYRAG	1 cut(s)	311
Sse9I	AATT	5 cut(s)	553, 682, 802, 838, 1047
SsiI	CCGC	4 cut(s)	28, 572, 575, 1003
SspDI	GGCGCC	1 cut(s)	323
StyD4I	CCNGG	5 cut(s)	96, 241, 269, 566, 907
StyI	CCWWGG	2 cut(s)	438, 507
TaaI	ACNGT	2 cut(s)	919, 976
TaiI	ACGT	3 cut(s)	66, 112, 216
TaqI	TCGA	8 cut(s)	150, 189, 198, 318, 330, 557, 780, 875
TaqII	GACCGA	1 cut(s)	104
TasI	AATT	5 cut(s)	553, 682, 802, 838, 1047
TauI	GCSGC	1 cut(s)	575
TfiI	GAWTC	1 cut(s)	334
Tru1I	TTAA	4 cut(s)	378, 420, 639, 1051
Tru9I	TTAA	4 cut(s)	378, 420, 639, 1051
TscAI	CASTG	2 cut(s)	83, 979
TseFI	GTSAC	4 cut(s)	105, 110, 790, 880
TseI	GCWGC	3 cut(s)	307, 669, 811
Tsp45I	GTSAC	4 cut(s)	105, 110, 790, 880
TspDTI	ATGAA	1 cut(s)	160
TspGWI	ACGGA	1 cut(s)	69
TspRI	CASTG	2 cut(s)	83, 979
Tth111I	GACNNNGTC	1 cut(s)	194
VpaK11BI	GGWCC	1 cut(s)	367
XapI	RAATTY	2 cut(s)	802, 1047
XmiI	GTMKAC	2 cut(s)	189, 318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.