Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006169

Physical Location & Seq

Genomic Coordinates Forward (+)

34142577 .. 34145775

Gene Structure 3199 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g44310.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

ATGGATGCCAAAACAAACACAAGGTTCTTGCTTTCCTTACTTTTCTTAAGCCTATGCCTCAAGTCCCATATCTGCTTTGGAGCTGACACCATCACAGCAAACCAGTCTCTCTCTGGTGACCAAACCATTGTTTCAGCTGGTGAGAAATTTGAGCTGGGTTTCTTCAAGCCAGGTAATACTTCAAACTACTACATAGGCATGTGGTACTACAAGACACTAGTGTCTTTGCAAACCATAGTCTGGGTGGCCAATAGGGAGCAGCCAGTCTCTGATAGATTTTCTTCAGAGCTGAGAATCTCAGATGGCAATTTGGTACTGTTTAATGAGTCCAAAGTACCAATTTGGTCCACAAATGTCAGTTCAGGTTCAGGTTCTTCTACACATGTGATTCTTTTAGATAAGGGAAACCTTGTGTTAAGAGCTGGGTCTGATTCCAATTCATCTTTGCCTTTATGGCAAAGTTTTGATCATCCAGCTCATACTTGGCTGCCAGAAGGTAGAATTGGGTTCAACACTGTCACAAACCAAACCCAAGTTCTGACTTCATGGAAGAATTCTGAGGACCCTGCACCGGGTCTGTACACTCTTGAGCTTGACCCGGATGGCACAGATGCATATTTCATACTGTGGAATAAGTCTAAGCAGTATTGGACTAGTGGACCTTGGGATCCAAAGAGTAATATTTTCAGTTTGGTTCCTGAGATGAGGCTTAACTATATCTACAACTTCAGCTTTTTTAAAAACAAAACTGAGAGCTACTTCACCTATTCTGTTTATGATCCTAGCAAAACATCTCGATTCGTTATGGATGTATCGGGTCAGATTAAGCAACAGACCTGGTTGATACCTCAGGGGTGGAACTTGTTTTGGTCTCAGCCGAGGAAACAATGTGAGGTTTATGCCTTTTGTGGAGCATTTGGAAGTTGCAATGAAAAATCCTTGCCCTTCTGTACATGTTTGGATGGTTTTGAGCCGAAATTGAAGGCAGATTGGGATTCGGGGGACTATTCTGGTGGCTGCAAAAGACAGACTATGCTGAATGTTGCTAATAGTGCTACTAACAATAATGGGAAGGAAGACCGGTTTTTAGAAATGCCTAGCATGTCTTTGCCTGAAAATAATGTGTCTGTAGATGTTGGGAGTACTGCACAATGTGAATCTTTCTGCTTAAGTAACAGCTCTTGCACTGCTTATGCTTATGACAACAATAGATGTTCAATATGGATTGGAGATCTCTTGGATCTGCAACTGACAGATGATGGTAACGGAAAAACTTTGTACCTCAGACTAGCAGCTTCAGAGTTTAAGGATCCGAAAAGTAAAAAGGGATTGATTATCGGTGTTGCAGTAGGCTCAGCTGTTGGGGTAGCAGTCCTATTAGGCCTCATTGTGGTTGTAATGTTGAGAAACAGAAATAGAGTGATTGGAAAAGCAGTGGAAGGTTCATTGGTGGCATTTGAGTATAGAGATCTTCAAGAAGTAACAAAGAACTTCTCAGAGAAATTGGGGGGAGGAGGTTTTGGTTCTGTCTTCAAGGGCACAATGCCTGACTCATCAGTCATAGCAGTGAAGAAGCTTGAAAGTGTTAGCCAAGGAGAGAAGCAATTCAGAACAGAAGTTAGCACCATTGGGACAATCCAACATGTCAATCTTGTTCGGCTGCGTGGTTTCTGCTCTGAAGGTGCCAAGAGGTTGTTGGTCTATGATTACATGCCTAATGGATCCCTGGATGCTCATCTTTTCAATTGTCAAACAGATGTTTTGGAGTGGAAAACAAGATACCAAATTGCTCTTGGGACAGCAAGAGGGTTGGCTTATCTTCATGAGAAATGTAGAGATTGTATCATACATTGTGACATTAAGCCAGAAAACATTCTCCTAGATACCGAACTTTGTCCCAAAGTCGCAGATTTTGGCCTTGCAAAGCTTGTTGGAAGAGAGTTCAGCCGAGTCCTGACCACAATGAGAGGCACACGAGGCTATCTTGCACCGGAGTGGATTTCAGGAGTGGCAGTCACAGCAAAAGCTGATGTTTACAGCTATGGAATGATGCTTTTCGAAATTGTTTCAGGAAGACGAAACTCTGAGCCATCTGAAGATGACAAAGTTAGATTCTTCCCAACTTACGCTGCTGGTGTGATCACTAGTACAGAGGAAGTTGATGTGCTGAGCCTATTGGACCCGAAGCTAGGGAGAAATGGTGATGTGGAAGAAGTCATAAGGGTTCTTAGAGTTGCTTGCTGGTGTGTCCAAGATGATGAGGCTCATAGACCATCAATGGGTCAAGTGGTGCAGATTCTCGAGGGGATTTTGGATGTGAACTTGCCCTCAATTCCAAGAGCACTCCAAGTCTTTGGAGATAGCCAGCACATAGTTTTCTTCACTGAGTCATCTTCAAGCCAGAGCTCACATGCACAAAGCAATAGCACATCAACAACTTCATCTCAGGTCAAAAGCACCACATCTTCAATTACCTCCAAGAGATCTGAAGAGCATCAAACAAGCACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

837

Amino Acids

92.73

Weight (kDa)

5.87

Isoelectric Point (pI)

38.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	78 - 184	1.7e-32	D-mannose binding lectin
S_locus_glycop	PF00954	217 - 326	1.1e-30	S-locus glycoprotein domain
PAN_2	PF08276	358 - 415	2e-14	PAN-like domain
PK_Tyr_Ser-Thr	PF07714	498 - 766	1.2e-40	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	499 - 765	6.2e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19130
fragaria_vesca	FvH4_6g44310
malus_domestica	MD09G1098900.v1.1 MD17G1087200.v1.1
prunus_persica	Prupe.3G227300_v2.0.a1 Prupe.3G227500_v2.0.a1
pyrus_communis	pycom09g02260 pycom17g08440
rosa_chinensis	RchiOBHm_Chr2g0161171 RchiOBHm_Chr2g0161191
rosa_laevigata	RLG00000021264 RLG00000021266 RLG00000029382
rosa_multiflora	Rmu_sc0006420.1_g000040 Rmu_sc0006420.1_g000045
rosa_roxburghii	Rroxscaffold_2G00089040 Rroxscaffold_2G00089060
rosa_rugosa	Rorug02G0486800 Rorug02G0486900
rosa_samantha	Rh2AG553500 Rh2BG567200 Rh2CG537300 Rh2CG537500 Rh2DG576500 Rh2DG576600
rosa_wichuraiana	Rw2G045780 Rw2G045800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	220, 1556
AccB1I	GGYRCC	1 cut(s)	1682
AccB7I	CCANNNNNTGG	1 cut(s)	240
AclWI	GGATC	8 cut(s)	662, 675, 773, 1248, 1304, 1317, 1716, 1729
AcoI	YGGCCR	1 cut(s)	246
AcsI	RAATTY	2 cut(s)	146, 553
AcuI	CTGAAG	6 cut(s)	267, 712, 1281, 1698, 2115, 2508
AdeI	CACNNNGTG	1 cut(s)	1154
AfaI	GTAC	8 cut(s)	206, 315, 336, 581, 952, 1144, 1280, 2149
AfiI	CCNNNNNNNGG	6 cut(s)	240, 571, 572, 1390, 2189, 2279
AflII	CTTAAG	2 cut(s)	46, 1168
AflIII	ACRYGT	3 cut(s)	382, 953, 1642
AgeI	ACCGGT	1 cut(s)	1080
AhlI	ACTAGT	3 cut(s)	217, 653, 2144
AjnI	CCWGG	3 cut(s)	169, 836, 1725
AjuI	GAANNNNNNNTTGG	4 cut(s)	486, 518, 519, 551
AleI	CACNNNNGTG	1 cut(s)	1993
Alw21I	GWGCWC	2 cut(s)	2344, 2408
Alw26I	GTCTC	3 cut(s)	111, 271, 876
AlwI	GGATC	8 cut(s)	662, 675, 773, 1248, 1304, 1317, 1716, 1729
AlwNI	CAGNNNCTG	1 cut(s)	269
Ama87I	CYCGRG	1 cut(s)	2300
AoxI	GGCC	3 cut(s)	246, 1381, 1915
ApeKI	GCWGC	6 cut(s)	259, 487, 1017, 1292, 1660, 2129
ApoI	RAATTY	2 cut(s)	146, 553
AsiGI	ACCGGT	1 cut(s)	1080
Asp700I	GAANNNNTTC	2 cut(s)	1604, 1872
AspS9I	GGNCC	4 cut(s)	345, 562, 659, 2179
AsuC2I	CCSGG	2 cut(s)	573, 599
AsuHPI	GGTGA	4 cut(s)	128, 152, 754, 2213
AsuII	TTCGAA	1 cut(s)	2058
AvaI	CYCGRG	1 cut(s)	2300
AvaII	GGWCC	4 cut(s)	345, 562, 659, 2179
AxyI	CCTNAGG	1 cut(s)	849
BaeGI	GKGCMC	1 cut(s)	1541
BalI	TGGCCA	1 cut(s)	248
BamHI	GGATCC	3 cut(s)	667, 1309, 1721
BanI	GGYRCC	1 cut(s)	1682
BanII	GRGCYC	1 cut(s)	2408
BauI	CACGAG	1 cut(s)	1974
BbsI	GAAGAC	3 cut(s)	1083, 1522, 2080
Bbv12I	GWGCWC	2 cut(s)	2344, 2408
BbvI	GCAGC	6 cut(s)	271, 474, 1004, 1304, 1647, 2116
BccI	CCATC	7 cut(s)	98, 296, 596, 956, 1253, 2098, 2281
BciT130I	CCWGG	3 cut(s)	171, 838, 1727
BclI	TGATCA	2 cut(s)	466, 2139
BcnI	CCSGG	2 cut(s)	573, 599
BcoDI	GTCTC	3 cut(s)	111, 271, 876
BcuI	ACTAGT	3 cut(s)	217, 653, 2144
BfaI	CTAG	8 cut(s)	218, 654, 783, 1098, 1289, 1880, 2145, 2189
BfmI	CTRYAG	1 cut(s)	1128
BfrI	CTTAAG	2 cut(s)	46, 1168
BglI	GCCNNNNNGGC	1 cut(s)	454
BglII	AGATCT	3 cut(s)	1231, 1468, 2483
BisI	GCNGC	6 cut(s)	260, 488, 1018, 1293, 1661, 2130
BlpI	GCTNAGC	2 cut(s)	1354, 2168
BlsI	GCNGC	6 cut(s)	261, 489, 1019, 1294, 1662, 2131
BmcAI	AGTACT	1 cut(s)	1144
Bme1390I	CCNGG	5 cut(s)	171, 573, 599, 838, 1727
Bme18I	GGWCC	4 cut(s)	345, 562, 659, 2179
BmeT110I	CYCGRG	1 cut(s)	2300
BmgT120I	GGNCC	4 cut(s)	345, 562, 659, 2179
BmiI	GGNNCC	7 cut(s)	564, 669, 696, 1311, 1684, 1723, 2181
BmrFI	CCNGG	5 cut(s)	171, 573, 599, 838, 1727
BmsI	GCATC	4 cut(s)	601, 1720, 2040, 2503
BpiI	GAAGAC	3 cut(s)	1083, 1522, 2080
Bpu1102I	GCTNAGC	2 cut(s)	1354, 2168
Bpu14I	TTCGAA	1 cut(s)	2058
BpuEI	CTTGAG	2 cut(s)	44, 608
BpuMI	CCSGG	2 cut(s)	573, 599
BsaBI	GATNNNNATC	1 cut(s)	1734
BsaI	GGTCTC	1 cut(s)	876
BsaJI	CCNNGG	4 cut(s)	662, 878, 1591, 1725
BsaWI	WCCGGW	2 cut(s)	1080, 1990
BsaXI	ACNNNNNCTCC	4 cut(s)	1998, 2028, 2185, 2215
Bsc4I	CCNNNNNNNGG	6 cut(s)	240, 571, 572, 1390, 2189, 2279
Bse118I	RCCGGY	1 cut(s)	1080
Bse1I	ACTGG	2 cut(s)	103, 263
Bse21I	CCTNAGG	1 cut(s)	849
Bse3DI	GCAATG	1 cut(s)	934
Bse8I	GATNNNNATC	1 cut(s)	1734
BseBI	CCWGG	3 cut(s)	171, 838, 1727
BseDI	CCNNGG	4 cut(s)	662, 878, 1591, 1725
BseGI	GGATG	7 cut(s)	10, 469, 607, 814, 967, 1735, 2320
BseJI	GATNNNNATC	1 cut(s)	1734
BseLI	CCNNNNNNNGG	6 cut(s)	240, 571, 572, 1390, 2189, 2279
BseMI	GCAATG	1 cut(s)	934
BseNI	ACTGG	2 cut(s)	103, 263
BseRI	GAGGAG	1 cut(s)	1527
BseSI	GKGCMC	1 cut(s)	1541
BseXI	GCAGC	6 cut(s)	271, 474, 1004, 1304, 1647, 2116
BseYI	CCCAGC	2 cut(s)	154, 422
BsgI	GTGCAG	3 cut(s)	552, 1131, 2312
BshFI	GGCC	3 cut(s)	248, 1383, 1917
BshNI	GGYRCC	1 cut(s)	1682
BshTI	ACCGGT	1 cut(s)	1080
BsiHKAI	GWGCWC	2 cut(s)	2344, 2408
BsiHKCI	CYCGRG	1 cut(s)	2300
BsiSI	CCGG	4 cut(s)	572, 599, 1081, 1991
BslFI	GGGAC	5 cut(s)	49, 1016, 1645, 1810, 1881
BslI	CCNNNNNNNGG	6 cut(s)	240, 571, 572, 1390, 2189, 2279
BsmAI	GTCTC	3 cut(s)	111, 271, 876
BsmFI	GGGAC	5 cut(s)	49, 1016, 1645, 1810, 1881
BsnI	GGCC	3 cut(s)	248, 1383, 1917
Bso31I	GGTCTC	1 cut(s)	876
BsoBI	CYCGRG	1 cut(s)	2300
Bsp119I	TTCGAA	1 cut(s)	2058
Bsp1286I	GDGCHC	3 cut(s)	1541, 2344, 2408
Bsp1407I	TGTACA	2 cut(s)	579, 950
Bsp1720I	GCTNAGC	2 cut(s)	1354, 2168
BspANI	GGCC	3 cut(s)	248, 1383, 1917
BspHI	TCATGA	1 cut(s)	1822
BspLI	GGNNCC	7 cut(s)	564, 669, 696, 1311, 1684, 1723, 2181
BspPI	GGATC	8 cut(s)	662, 675, 773, 1248, 1304, 1317, 1716, 1729
BspQI	GCTCTTC	1 cut(s)	2484
BspT104I	TTCGAA	1 cut(s)	2058
BspT107I	GGYRCC	1 cut(s)	1682
BspTI	CTTAAG	2 cut(s)	46, 1168
BspTNI	GGTCTC	1 cut(s)	876
BsrDI	GCAATG	1 cut(s)	934
BsrFI	RCCGGY	1 cut(s)	1080
BsrGI	TGTACA	2 cut(s)	579, 950
BsrI	ACTGG	2 cut(s)	103, 263
BssAI	RCCGGY	1 cut(s)	1080
BssECI	CCNNGG	4 cut(s)	662, 878, 1591, 1725
BssSI	CACGAG	1 cut(s)	1974
BssT1I	CCWWGG	2 cut(s)	662, 1591
Bst2BI	CACGAG	1 cut(s)	1974
Bst2UI	CCWGG	3 cut(s)	171, 838, 1727
Bst4CI	ACNGT	3 cut(s)	318, 517, 627
Bst6I	CTCTTC	2 cut(s)	1930, 2484
BstAFI	CTTAAG	2 cut(s)	46, 1168
BstAUI	TGTACA	2 cut(s)	579, 950
BstBI	TTCGAA	1 cut(s)	2058
BstC8I	GCNNGC	2 cut(s)	2239, 2366
BstEII	GGTNACC	1 cut(s)	116
BstF5I	GGATG	7 cut(s)	10, 469, 607, 814, 967, 1735, 2320
BstMAI	GTCTC	3 cut(s)	111, 271, 876
BstMWI	GCNNNNNNNGC	4 cut(s)	454, 1052, 1977, 2018
BstNI	CCWGG	3 cut(s)	171, 838, 1727
BstNSI	RCATGY	7 cut(s)	202, 386, 957, 1105, 1646, 1714, 2414
BstPI	GGTNACC	1 cut(s)	116
BstSCI	CCNGG	5 cut(s)	169, 571, 597, 836, 1725
BstSFI	CTRYAG	1 cut(s)	1128
BstSLI	GKGCMC	1 cut(s)	1541
BstV1I	GCAGC	6 cut(s)	271, 474, 1004, 1304, 1647, 2116
BstV2I	GAAGAC	3 cut(s)	1083, 1522, 2080
BstX2I	RGATCY	7 cut(s)	667, 1231, 1240, 1309, 1468, 1721, 2483
BstXI	CCANNNNNNTGG	1 cut(s)	2354
BstYI	RGATCY	7 cut(s)	667, 1231, 1240, 1309, 1468, 1721, 2483
Bsu36I	CCTNAGG	1 cut(s)	849
BsuRI	GGCC	3 cut(s)	248, 1383, 1917
BtsCI	GGATG	7 cut(s)	10, 469, 607, 814, 967, 1735, 2320
BtsI	GCAGTG	3 cut(s)	1185, 1440, 1572
BtsIMutI	CAGTG	5 cut(s)	513, 1185, 1440, 1572, 2382
Cac8I	GCNNGC	2 cut(s)	2239, 2366
CaiI	CAGNNNCTG	1 cut(s)	269
CciI	TCATGA	1 cut(s)	1822
Cfr10I	RCCGGY	1 cut(s)	1080
Cfr13I	GGNCC	4 cut(s)	345, 562, 659, 2179
CsiI	ACCWGGT	1 cut(s)	836
Csp6I	GTAC	8 cut(s)	205, 314, 335, 580, 951, 1143, 1279, 2148
CspAI	ACCGGT	1 cut(s)	1080
CviAII	CATG	9 cut(s)	199, 383, 546, 954, 1102, 1643, 1711, 1823, 2411
CviQI	GTAC	8 cut(s)	205, 314, 335, 580, 951, 1143, 1279, 2148
DraI	TTTAAA	1 cut(s)	739
DraIII	CACNNNGTG	1 cut(s)	1154
DrdI	GACNNNNNNGTC	2 cut(s)	220, 1556
DseDI	GACNNNNNNGTC	2 cut(s)	220, 1556
EaeI	YGGCCR	1 cut(s)	246
Eam1104I	CTCTTC	2 cut(s)	1930, 2484
EarI	CTCTTC	2 cut(s)	1930, 2484
Ecl136II	GAGCTC	1 cut(s)	2406
Eco130I	CCWWGG	2 cut(s)	662, 1591
Eco147I	AGGCCT	1 cut(s)	1383
Eco24I	GRGCYC	1 cut(s)	2408
Eco31I	GGTCTC	1 cut(s)	876
Eco47I	GGWCC	4 cut(s)	345, 562, 659, 2179
Eco53kI	GAGCTC	1 cut(s)	2406
Eco57I	CTGAAG	6 cut(s)	267, 712, 1281, 1698, 2115, 2508
Eco81I	CCTNAGG	1 cut(s)	849
Eco88I	CYCGRG	1 cut(s)	2300
Eco91I	GGTNACC	1 cut(s)	116
EcoICRI	GAGCTC	1 cut(s)	2406
EcoO109I	RGGNCCY	1 cut(s)	562
EcoO65I	GGTNACC	1 cut(s)	116
EcoRI	GAATTC	1 cut(s)	553
EcoRII	CCWGG	3 cut(s)	169, 836, 1725
EcoT14I	CCWWGG	2 cut(s)	662, 1591
EcoT22I	ATGCAT	1 cut(s)	616
EcoT38I	GRGCYC	1 cut(s)	2408
ErhI	CCWWGG	2 cut(s)	662, 1591
FaeI	CATG	9 cut(s)	202, 386, 549, 957, 1105, 1646, 1714, 1826, 2414
FaqI	GGGAC	5 cut(s)	49, 1016, 1645, 1810, 1881
FatI	CATG	9 cut(s)	198, 382, 545, 953, 1101, 1642, 1710, 1822, 2410
FbaI	TGATCA	2 cut(s)	466, 2139
Fnu4HI	GCNGC	6 cut(s)	260, 488, 1018, 1293, 1661, 2130
FokI	GGATG	7 cut(s)	17, 456, 614, 821, 974, 1742, 2327
FriOI	GRGCYC	1 cut(s)	2408
Fsp4HI	GCNGC	6 cut(s)	260, 488, 1018, 1293, 1661, 2130
FspBI	CTAG	8 cut(s)	218, 654, 783, 1098, 1289, 1880, 2145, 2189
GluI	GCNGC	6 cut(s)	260, 488, 1018, 1293, 1661, 2130
GsaI	CCCAGC	2 cut(s)	158, 426
HaeIII	GGCC	3 cut(s)	248, 1383, 1917
HapII	CCGG	4 cut(s)	572, 599, 1081, 1991
Hin1II	CATG	9 cut(s)	202, 386, 549, 957, 1105, 1646, 1714, 1826, 2414
HindIII	AAGCTT	2 cut(s)	1574, 1925
HpaII	CCGG	4 cut(s)	572, 599, 1081, 1991
HphI	GGTGA	4 cut(s)	128, 152, 754, 2213
Hpy166II	GTNNAC	5 cut(s)	348, 582, 659, 2035, 2320
Hpy188III	TCNNGA	9 cut(s)	587, 698, 795, 1475, 1823, 1954, 2004, 2070, 2300
Hpy8I	GTNNAC	5 cut(s)	348, 582, 659, 2035, 2320
HpyAV	CCTTC	6 cut(s)	488, 955, 976, 1066, 1433, 1673
HpyCH4III	ACNGT	3 cut(s)	318, 517, 627
HpyF10VI	GCNNNNNNNGC	4 cut(s)	454, 1052, 1977, 2018
Hsp92II	CATG	9 cut(s)	202, 386, 549, 957, 1105, 1646, 1714, 1826, 2414
Ksp22I	TGATCA	2 cut(s)	466, 2139
LguI	GCTCTTC	1 cut(s)	2484
LmnI	GCTCC	3 cut(s)	80, 256, 911
Lsp1109I	GCAGC	6 cut(s)	271, 474, 1004, 1304, 1647, 2116
LweI	GCATC	4 cut(s)	601, 1720, 2040, 2503
MabI	ACCWGGT	1 cut(s)	836
MaeI	CTAG	8 cut(s)	218, 654, 783, 1098, 1289, 1880, 2145, 2189
MaeIII	GTNAC	7 cut(s)	116, 517, 1172, 1262, 1480, 1853, 2014
MfeI	CAATTG	1 cut(s)	1744
MflI	RGATCY	7 cut(s)	667, 1231, 1240, 1309, 1468, 1721, 2483
MhlI	GDGCHC	3 cut(s)	1541, 2344, 2408
MlsI	TGGCCA	1 cut(s)	248
MluNI	TGGCCA	1 cut(s)	248
MlyI	GAGTC	4 cut(s)	335, 1544, 1959, 2396
MmeI	TCCRAC	2 cut(s)	1663, 1912
Mox20I	TGGCCA	1 cut(s)	248
Mph1103I	ATGCAT	1 cut(s)	616
MroXI	GAANNNNTTC	2 cut(s)	1604, 1872
MscI	TGGCCA	1 cut(s)	248
MseI	TTAA	9 cut(s)	47, 321, 416, 711, 738, 825, 1169, 1305, 1860
MslI	CAYNNNNRTG	3 cut(s)	197, 1565, 1993
Msp20I	TGGCCA	1 cut(s)	248
MspA1I	CMGCKG	2 cut(s)	137, 1358
MspCI	CTTAAG	2 cut(s)	46, 1168
MspI	CCGG	4 cut(s)	572, 599, 1081, 1991
MspR9I	CCNGG	5 cut(s)	171, 573, 599, 838, 1727
MunI	CAATTG	1 cut(s)	1744
MvaI	CCWGG	3 cut(s)	171, 838, 1727
MwoI	GCNNNNNNNGC	4 cut(s)	454, 1052, 1977, 2018
NciI	CCSGG	2 cut(s)	573, 599
NlaIII	CATG	9 cut(s)	202, 386, 549, 957, 1105, 1646, 1714, 1826, 2414
NlaIV	GGNNCC	7 cut(s)	564, 669, 696, 1311, 1684, 1723, 2181
NmeAIII	GCCGAG	2 cut(s)	903, 1973
NmuCI	GTSAC	4 cut(s)	116, 517, 1853, 2014
NsiI	ATGCAT	1 cut(s)	616
NspI	RCATGY	7 cut(s)	202, 386, 957, 1105, 1646, 1714, 2414
NspV	TTCGAA	1 cut(s)	2058
OliI	CACNNNNGTG	1 cut(s)	1993
PaeR7I	CTCGAG	1 cut(s)	2300
PagI	TCATGA	1 cut(s)	1822
PceI	AGGCCT	1 cut(s)	1383
PciI	ACATGT	3 cut(s)	382, 953, 1642
PciSI	GCTCTTC	1 cut(s)	2484
PdmI	GAANNNNTTC	2 cut(s)	1604, 1872
PfeI	GAWTC	8 cut(s)	294, 388, 431, 798, 995, 1157, 2112, 2296
PflMI	CCANNNNNTGG	1 cut(s)	240
PinAI	ACCGGT	1 cut(s)	1080
PkrI	GCNGC	6 cut(s)	261, 489, 1019, 1294, 1662, 2131
PleI	GAGTC	4 cut(s)	334, 1544, 1958, 2395
PpsI	GAGTC	4 cut(s)	334, 1544, 1958, 2395
PpuMI	RGGWCCY	1 cut(s)	562
PscI	ACATGT	3 cut(s)	382, 953, 1642
Psp124BI	GAGCTC	1 cut(s)	2408
Psp5II	RGGWCCY	1 cut(s)	562
Psp6I	CCWGG	3 cut(s)	169, 836, 1725
PspEI	GGTNACC	1 cut(s)	116
PspFI	CCCAGC	2 cut(s)	154, 422
PspGI	CCWGG	3 cut(s)	169, 836, 1725
PspN4I	GGNNCC	7 cut(s)	564, 669, 696, 1311, 1684, 1723, 2181
PspPI	GGNCC	4 cut(s)	345, 562, 659, 2179
PspPPI	RGGWCCY	1 cut(s)	562
PstNI	CAGNNNCTG	1 cut(s)	269
PsuI	RGATCY	7 cut(s)	667, 1231, 1240, 1309, 1468, 1721, 2483
PvuII	CAGCTG	2 cut(s)	137, 1358
RsaI	GTAC	8 cut(s)	206, 315, 336, 581, 952, 1144, 1280, 2149
RsaNI	GTAC	8 cut(s)	205, 314, 335, 580, 951, 1143, 1279, 2148
RseI	CAYNNNNRTG	3 cut(s)	197, 1565, 1993
SacI	GAGCTC	1 cut(s)	2408
SapI	GCTCTTC	1 cut(s)	2484
SaqAI	TTAA	9 cut(s)	47, 321, 416, 711, 738, 825, 1169, 1305, 1860
SatI	GCNGC	6 cut(s)	260, 488, 1018, 1293, 1661, 2130
Sau96I	GGNCC	4 cut(s)	345, 562, 659, 2179
ScaI	AGTACT	1 cut(s)	1144
SchI	GAGTC	4 cut(s)	335, 1544, 1959, 2396
ScrFI	CCNGG	5 cut(s)	171, 573, 599, 838, 1727
SduI	GDGCHC	3 cut(s)	1541, 2344, 2408
SexAI	ACCWGGT	1 cut(s)	836
SfaNI	GCATC	4 cut(s)	601, 1720, 2040, 2503
SfcI	CTRYAG	1 cut(s)	1128
Sfr274I	CTCGAG	1 cut(s)	2300
SfuI	TTCGAA	1 cut(s)	2058
SinI	GGWCC	4 cut(s)	345, 562, 659, 2179
SlaI	CTCGAG	1 cut(s)	2300
SmiMI	CAYNNNNRTG	3 cut(s)	197, 1565, 1993
SmlI	CTYRAG	5 cut(s)	46, 59, 587, 1168, 2300
SmoI	CTYRAG	5 cut(s)	46, 59, 587, 1168, 2300
SpeI	ACTAGT	3 cut(s)	217, 653, 2144
SseBI	AGGCCT	1 cut(s)	1383
SspI	AATATT	1 cut(s)	682
SspMI	CTAG	8 cut(s)	218, 654, 783, 1098, 1289, 1880, 2145, 2189
SstI	GAGCTC	1 cut(s)	2408
StuI	AGGCCT	1 cut(s)	1383
StyD4I	CCNGG	5 cut(s)	169, 571, 597, 836, 1725
StyI	CCWWGG	2 cut(s)	662, 1591
TaaI	ACNGT	3 cut(s)	318, 517, 627
TaqI	TCGA	3 cut(s)	796, 2058, 2301
TatI	WGTACW	4 cut(s)	579, 950, 1142, 2147
TfiI	GAWTC	8 cut(s)	294, 388, 431, 798, 995, 1157, 2112, 2296
Tru1I	TTAA	9 cut(s)	47, 321, 416, 711, 738, 825, 1169, 1305, 1860
Tru9I	TTAA	9 cut(s)	47, 321, 416, 711, 738, 825, 1169, 1305, 1860
TscAI	CASTG	5 cut(s)	520, 1192, 1440, 1572, 2389
TseFI	GTSAC	4 cut(s)	116, 517, 1853, 2014
TseI	GCWGC	6 cut(s)	259, 487, 1017, 1292, 1660, 2129
Tsp45I	GTSAC	4 cut(s)	116, 517, 1853, 2014
TspDTI	ATGAA	7 cut(s)	429, 534, 610, 945, 1434, 1811, 2430
TspGWI	ACGGA	1 cut(s)	1281
TspRI	CASTG	5 cut(s)	520, 1192, 1440, 1572, 2389
Van91I	CCANNNNNTGG	1 cut(s)	240
Vha464I	CTTAAG	2 cut(s)	46, 1168
VpaK11BI	GGWCC	4 cut(s)	345, 562, 659, 2179
XapI	RAATTY	2 cut(s)	146, 553
XceI	RCATGY	7 cut(s)	202, 386, 957, 1105, 1646, 1714, 2414
XcmI	CCANNNNNNNNNTGG	6 cut(s)	74, 110, 241, 480, 1693, 1790
XhoI	CTCGAG	1 cut(s)	2300
XmnI	GAANNNNTTC	2 cut(s)	1604, 1872
XspI	CTAG	8 cut(s)	218, 654, 783, 1098, 1289, 1880, 2145, 2189
ZrmI	AGTACT	1 cut(s)	1144
Zsp2I	ATGCAT	1 cut(s)	616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.