Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0006169

Physical Location & Seq

Genomic Coordinates Reverse (-)

6311165 .. 6313672

Gene Structure 2508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g08440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGGATGCCAAAACCAAGCAAAGATTGATGCTTTCAGTTCTTTTCTTCTGCTATCTCAAAAGCCATGTCTCCCTTGCAGCCGACTCCATCACCGCAAACCAATCTCTCTCCGGCGACCAAACCATTGTCTCCGCCGCTGGGATTTTCGAGCTCGGTTTCTTCAATCCAGGTAATTCTTCAAACTTCTACATAGGCATGTGGTACACCAAACAAGTGGTATCCGAGAGAACCATAGTTTGGGTGGCAAACAGAGAAAAACCAGTTTCCGATAGATTTTCTTCGGTTTTGAGGATGTCGGATGGTAATTTAGTCCTCTTGAACGAGTCCAAAACCCCCATTTGGTCAACGAATTTAACCTCCTCCTCCGCCACCACTGCACGTCTTTTGGATACCGGAAACCTCGTCTTGAGATCGGGGTCTGGTAATATTACTTCGGAGGCGTTATGGCAAAGCTTTGATCATCCAGCTCACACATGGCTTCCAGAAGGTAGGATTGGGTTTAACACTGTTACCAAACAAACCCAAATTCTTACTTCATGGAAGAGTTCGGAGGATCCTGCACCGGGTCTTTTCTCGCTCGAGTTAGACCCCAACGGAAGCAATGCGTATTTCATACTGTGGAATAGGTCTAGACAGTATTGGACTAGTGGACCATGGGATCCAAAATCAAAGATTTTCAGCTTGGTTCCGGAAATGAGGCTCAATTATATATACGACTTCAGCTATTTTACGAATGAAACCGAAAGTTATTTCACCTATTCTGTTTATGATCGTAAGAGAGTGTCTCGTTTCGTGATGTATACTTCGGGGCAGATTCAACAGCTGACATGGTTGGAGACTTCCAGGAAATGGAATTTGTTTTGGTCTCAACCGAGAAAGCAATGCGAAGTTTATGATTTGTGTGGCGCATTCGGAAGTTGCAATGAGCAAAGCAACCTCGCCTGTAATTGCTTGAACGGTTTTGAGCCCAAGTCGAAGAGAGATTGGGATTTGATGGACTACTCTGGTGGGTGTTCGAGAAAAACTCGTCTGTATTGTGAAAATGCTACTAGTGCTAACGGGAAGCCAGACCGGTTTCTTGAACTTCCTAGCATGTCATTGCCTGAAAATAAACAGTCTGCGGAGGTTGGGAGTATTGCGGAATGTGAATCGTTCTGCCTTAGAAACTGCTCTTGCACTGCTTATGCTTACAACAGAAGTGGATGTTCGGTTTGGAAAGGAGAGCTTTCGGATTTGCAACAACTAACATCAAGTGACGACCAGGGAAGTACTTTATACCTCAAACTTGCAGCATCTGAGTTTAAGAGTTCGAAAAGCAACAAGGGATTGATTGTTGGTGTTGTGGCAGGCTCAACTGCCGGTGTAGCAGTTCTTTTAGGCCTTATTGTATTTGCAATCTTGAGACGGAGAAAGCGGGTGAAAGGATTGGGAAAAGCAGTAGAGGGTTCGTTGGTGGCATTCGGGTACAGAGATATGCAAGATGCAACGAAGAACTTCTCCGAAAAATTGGGGGGAGGAGGTTTTGGTTCTGTTTTCAAAGGGACATTGCCCGATTCGTCTGTCATAGCAGTGAAGAAGCTTGAAAGTGTTAGCCAAGGGGAGAAGCAATTCAGAACAGAAGTGAGCACAATTGGGACAATCCAGCATGTCAATCTTGTCCGCCTTCGTGGGTTCTGCTCCGAAGGTTCTAAAAGGATGTTGGTGTATGATTACATGCCAAACGGATCTTTGGACTCTCAACTCTTCAACGATAAGGGTCCGGGGGTCTTGGATTGGAAAACAAGGTACCAAATTGCACTTGGGACAGCAAGAGGGTTGGCTTATCTTCACGAGAAGTGCAGAGATTGCATCATACATTGTGACATAAAGCCAGAAAACATCCTCTTAGACGCTGAACTTTGTCCGAAAGTAGCAGATTTTGGCCTTGCAAAGCTTGTTGGAAGAGAGTTTAGTAGGGTCCTGACAACCATGAGAGGGACAAGAGGCTATCTTGCGCCAGAGTGGATTTCAGGCGTGCCGATCACAGTGAAAGCGGATGTGTACAGCTACGGAATGATGCTGTTTGAATTCGTTTCGGGGAGAAGAAACTCGGAGCAATCTGAAGATGGGAAAGTTAGATTCTTCCCAGCTTATGCTGCTAGCCAGATTAGTACTCCAGAAAGTGATGTGTTGAGCCTATTGGATCCGAGTCTCGATGGCAATGCGGACGTAGAAGAGCTCACTAGGGTTTGTAGAGTTTCATGCTGGTGTGTCCAAGATGATGAAGCTCAGAGGCCGTCAATGGGGCAGGTGGTGCAAATCCTCGAGGCAGTTTCCGATGTCAACTTGCCGCCAATTCCGAGAGCTCTTCAATTGTTTGCAGACGACCAGGAGCAGATAGTTTTCTTCACTGAGTCATCCTCGAACCAGAGTTCGCGCCCGCGGAGCAATAACACATCGACTGCTTCCTCTCAGACCAAAAGCACCCCATCTTCAACCATCTCCAAGGGATCTGAAGAGCATCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

836

Amino Acids

92.79

Weight (kDa)

7.69

Isoelectric Point (pI)

43.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	77 - 181	4e-32	D-mannose binding lectin
S_locus_glycop	PF00954	214 - 325	3.8e-32	S-locus glycoprotein domain
PAN_2	PF08276	355 - 411	7.3e-15	PAN-like domain
PK_Tyr_Ser-Thr	PF07714	499 - 767	1.1e-39	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	500 - 766	2.4e-46	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19130
fragaria_vesca	FvH4_6g44310
malus_domestica	MD09G1098900.v1.1 MD17G1087200.v1.1
prunus_persica	Prupe.3G227300_v2.0.a1 Prupe.3G227500_v2.0.a1
pyrus_communis	pycom09g02260 pycom17g08440
rosa_chinensis	RchiOBHm_Chr2g0161171 RchiOBHm_Chr2g0161191
rosa_laevigata	RLG00000021264 RLG00000021266 RLG00000029382
rosa_multiflora	Rmu_sc0006420.1_g000040 Rmu_sc0006420.1_g000045
rosa_roxburghii	Rroxscaffold_2G00089040 Rroxscaffold_2G00089060
rosa_rugosa	Rorug02G0486800 Rorug02G0486900
rosa_samantha	Rh2AG553500 Rh2BG567200 Rh2CG537300 Rh2CG537500 Rh2DG576500 Rh2DG576600
rosa_wichuraiana	Rw2G045780 Rw2G045800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2278
AbsI	CCTCGAGG	1 cut(s)	2303
Acc36I	ACCTGC	1 cut(s)	2278
Acc65I	GGTACC	1 cut(s)	1785
AccB1I	GGYRCC	1 cut(s)	1785
AccB7I	CCANNNNNTGG	2 cut(s)	237, 849
AccI	GTMKAC	1 cut(s)	800
AccII	CGCG	2 cut(s)	2416, 2422
AccIII	TCCGGA	1 cut(s)	688
AclWI	GGATC	8 cut(s)	548, 561, 653, 666, 1732, 2177, 2190, 2497
AcsI	RAATTY	4 cut(s)	349, 525, 853, 2066
AcuI	CTGAAG	2 cut(s)	703, 2121
AfaI	GTAC	6 cut(s)	203, 1270, 1466, 1787, 2042, 2152
AfiI	CCNNNNNNNGG	7 cut(s)	138, 237, 339, 563, 849, 1974, 2282
AgeI	ACCGGT	1 cut(s)	1071
AhlI	ACTAGT	2 cut(s)	644, 1049
AjiI	CACGTC	1 cut(s)	380
AjnI	CCWGG	4 cut(s)	166, 842, 1260, 2367
AjuI	GAANNNNNNNTTGG	4 cut(s)	220, 252, 477, 509
Alw21I	GWGCWC	4 cut(s)	153, 1628, 2220, 2347
Alw26I	GTCTC	7 cut(s)	73, 133, 789, 830, 870, 1396, 2195
AlwI	GGATC	8 cut(s)	548, 561, 653, 666, 1732, 2177, 2190, 2497
AlwNI	CAGNNNCTG	1 cut(s)	1295
Ama87I	CYCGRG	2 cut(s)	578, 2303
Aor13HI	TCCGGA	1 cut(s)	688
AoxI	GGCC	3 cut(s)	1378, 1921, 2273
ApeKI	GCWGC	3 cut(s)	77, 1289, 2135
ApoI	RAATTY	4 cut(s)	349, 525, 853, 2066
ArsI	GACNNNNNNTTYG	2 cut(s)	51, 83
AsiGI	ACCGGT	1 cut(s)	1071
Asp700I	GAANNNNTTC	2 cut(s)	1493, 1607
Asp718I	GGTACC	1 cut(s)	1785
AspLEI	GCGC	3 cut(s)	908, 1996, 2418
AspS9I	GGNCC	3 cut(s)	650, 1757, 1957
AsuC2I	CCSGG	2 cut(s)	564, 1761
AsuHPI	GGTGA	3 cut(s)	82, 745, 1429
AsuII	TTCGAA	1 cut(s)	1310
AsuNHI	GCTAGC	1 cut(s)	2138
AvaI	CYCGRG	2 cut(s)	578, 2303
AvaII	GGWCC	3 cut(s)	650, 1757, 1957
BamHI	GGATCC	3 cut(s)	553, 658, 2182
BanI	GGYRCC	1 cut(s)	1785
BanII	GRGCYC	4 cut(s)	153, 969, 2220, 2347
BarI	GAAGNNNNNNTAC	2 cut(s)	415, 447
BauI	CACGAG	1 cut(s)	1829
Bbv12I	GWGCWC	4 cut(s)	153, 1628, 2220, 2347
BbvI	GCAGC	3 cut(s)	89, 1301, 2122
BccI	CCATC	7 cut(s)	95, 293, 988, 2099, 2189, 2476, 2486
BceAI	ACGGC	1 cut(s)	2260
BcgI	CGANNNNNNTGC	2 cut(s)	2183, 2217
BciT130I	CCWGG	4 cut(s)	168, 844, 1262, 2369
BciVI	GTATCC	2 cut(s)	229, 382
BclI	TGATCA	1 cut(s)	457
BcnI	CCSGG	2 cut(s)	564, 1761
BcoDI	GTCTC	7 cut(s)	73, 133, 789, 830, 870, 1396, 2195
BcuI	ACTAGT	2 cut(s)	644, 1049
BfaI	CTAG	6 cut(s)	630, 645, 1050, 1089, 2139, 2223
BfuAI	ACCTGC	1 cut(s)	2278
BfuI	GTATCC	2 cut(s)	229, 382
BisI	GCNGC	5 cut(s)	78, 135, 1290, 2136, 2330
BlsI	GCNGC	5 cut(s)	79, 136, 1291, 2137, 2331
BmcAI	AGTACT	2 cut(s)	1270, 2152
Bme1390I	CCNGG	6 cut(s)	168, 564, 844, 1262, 1761, 2369
Bme18I	GGWCC	3 cut(s)	650, 1757, 1957
BmeT110I	CYCGRG	2 cut(s)	578, 2303
BmgBI	CACGTC	1 cut(s)	380
BmgT120I	GGNCC	3 cut(s)	650, 1757, 1957
BmiI	GGNNCC	7 cut(s)	555, 660, 687, 1758, 1787, 1958, 2184
BmrFI	CCNGG	6 cut(s)	168, 564, 844, 1262, 1761, 2369
BmsI	GCATC	5 cut(s)	18, 1301, 1471, 1857, 2046
BmtI	GCTAGC	1 cut(s)	2142
BplI	GAGNNNNNCTC	6 cut(s)	769, 801, 1009, 1041, 2384, 2416
BpmI	CTGGAG	1 cut(s)	2139
Bpu14I	TTCGAA	1 cut(s)	1310
BpuEI	CTTGAG	2 cut(s)	427, 1420
BpuMI	CCSGG	2 cut(s)	564, 1761
BsaI	GGTCTC	1 cut(s)	870
BsaJI	CCNNGG	6 cut(s)	653, 1261, 1594, 1760, 2420, 2484
BsaWI	WCCGGW	3 cut(s)	392, 688, 1071
Bsc4I	CCNNNNNNNGG	7 cut(s)	138, 237, 339, 563, 849, 1974, 2282
Bse118I	RCCGGY	2 cut(s)	1071, 1358
Bse1I	ACTGG	1 cut(s)	260
Bse3DI	GCAATG	6 cut(s)	607, 887, 928, 1097, 1544, 2206
BseAI	TCCGGA	1 cut(s)	688
BseBI	CCWGG	4 cut(s)	168, 844, 1262, 2369
BseDI	CCNNGG	6 cut(s)	653, 1261, 1594, 1760, 2420, 2484
BseGI	GGATG	9 cut(s)	10, 297, 304, 460, 1208, 1701, 1878, 2041, 2396
BseLI	CCNNNNNNNGG	7 cut(s)	138, 237, 339, 563, 849, 1974, 2282
BseMI	GCAATG	6 cut(s)	607, 887, 928, 1097, 1544, 2206
BseMII	CTCAG	4 cut(s)	1287, 2282, 2382, 2465
BseNI	ACTGG	1 cut(s)	260
BseRI	GAGGAG	3 cut(s)	349, 352, 1530
BseXI	GCAGC	3 cut(s)	89, 1301, 2122
BseYI	CCCAGC	2 cut(s)	137, 2125
BsgI	GTGCAG	3 cut(s)	360, 543, 1858
Bsh1236I	CGCG	2 cut(s)	2416, 2422
BshFI	GGCC	3 cut(s)	1380, 1923, 2275
BshNI	GGYRCC	1 cut(s)	1785
BshTI	ACCGGT	1 cut(s)	1071
BsiHKAI	GWGCWC	4 cut(s)	153, 1628, 2220, 2347
BsiHKCI	CYCGRG	2 cut(s)	578, 2303
BsiSI	CCGG	7 cut(s)	111, 393, 563, 689, 1072, 1359, 1760
BslFI	GGGAC	4 cut(s)	1555, 1648, 1816, 1990
BslI	CCNNNNNNNGG	7 cut(s)	138, 237, 339, 563, 849, 1974, 2282
BsmAI	GTCTC	7 cut(s)	73, 133, 789, 830, 870, 1396, 2195
BsmBI	CGTCTC	1 cut(s)	1396
BsmFI	GGGAC	4 cut(s)	1555, 1648, 1816, 1990
BsmI	GAATGC	2 cut(s)	908, 1457
BsnI	GGCC	3 cut(s)	1380, 1923, 2275
Bso31I	GGTCTC	1 cut(s)	870
BsoBI	CYCGRG	2 cut(s)	578, 2303
Bsp119I	TTCGAA	1 cut(s)	1310
Bsp1286I	GDGCHC	5 cut(s)	153, 969, 1628, 2220, 2347
Bsp13I	TCCGGA	1 cut(s)	688
Bsp1407I	TGTACA	1 cut(s)	2040
Bsp143I	GATC	9 cut(s)	410, 457, 553, 658, 769, 1724, 2019, 2182, 2489
Bsp19I	CCATGG	1 cut(s)	653
BspANI	GGCC	3 cut(s)	1380, 1923, 2275
BspCNI	CTCAG	4 cut(s)	1288, 2281, 2383, 2464
BspEI	TCCGGA	1 cut(s)	688
BspFNI	CGCG	2 cut(s)	2416, 2422
BspLI	GGNNCC	7 cut(s)	555, 660, 687, 1758, 1787, 1958, 2184
BspMI	ACCTGC	1 cut(s)	2278
BspOI	GCTAGC	1 cut(s)	2142
BspPI	GGATC	8 cut(s)	548, 561, 653, 666, 1732, 2177, 2190, 2497
BspQI	GCTCTTC	3 cut(s)	2208, 2352, 2490
BspT104I	TTCGAA	1 cut(s)	1310
BspT107I	GGYRCC	1 cut(s)	1785
BspTNI	GGTCTC	1 cut(s)	870
BsrDI	GCAATG	6 cut(s)	607, 887, 928, 1097, 1544, 2206
BsrFI	RCCGGY	2 cut(s)	1071, 1358
BsrGI	TGTACA	1 cut(s)	2040
BsrI	ACTGG	1 cut(s)	260
BssAI	RCCGGY	2 cut(s)	1071, 1358
BssECI	CCNNGG	6 cut(s)	653, 1261, 1594, 1760, 2420, 2484
BssMI	GATC	9 cut(s)	410, 457, 553, 658, 769, 1724, 2019, 2182, 2489
BssNAI	GTATAC	1 cut(s)	801
BssSI	CACGAG	1 cut(s)	1829
BssT1I	CCWWGG	3 cut(s)	653, 1594, 2484
Bst1107I	GTATAC	1 cut(s)	801
Bst2BI	CACGAG	1 cut(s)	1829
Bst2UI	CCWGG	4 cut(s)	168, 844, 1262, 2369
Bst4CI	ACNGT	6 cut(s)	508, 618, 636, 959, 1116, 2026
Bst6I	CTCTTC	7 cut(s)	536, 971, 1748, 1936, 2208, 2352, 2490
BstAPI	GCANNNNNTGC	2 cut(s)	1845, 2293
BstAUI	TGTACA	1 cut(s)	2040
BstBI	TTCGAA	1 cut(s)	1310
BstC8I	GCNNGC	4 cut(s)	1348, 2015, 2140, 2420
BstDEI	CTNAG	6 cut(s)	1160, 1296, 1885, 2268, 2391, 2451
BstDSI	CCRYGG	2 cut(s)	653, 2420
BstF5I	GGATG	9 cut(s)	10, 297, 304, 460, 1208, 1701, 1878, 2041, 2396
BstFNI	CGCG	2 cut(s)	2416, 2422
BstHHI	GCGC	3 cut(s)	908, 1996, 2418
BstKTI	GATC	9 cut(s)	413, 460, 556, 661, 772, 1727, 2022, 2185, 2492
BstMAI	GTCTC	7 cut(s)	73, 133, 789, 830, 870, 1396, 2195
BstMBI	GATC	9 cut(s)	410, 457, 553, 658, 769, 1724, 2019, 2182, 2489
BstMWI	GCNNNNNNNGC	7 cut(s)	374, 1052, 1364, 1845, 2135, 2293, 2424
BstNI	CCWGG	4 cut(s)	168, 844, 1262, 2369
BstNSI	RCATGY	4 cut(s)	199, 1096, 1649, 1717
BstSCI	CCNGG	6 cut(s)	166, 562, 842, 1260, 1759, 2367
BstUI	CGCG	2 cut(s)	2416, 2422
BstV1I	GCAGC	3 cut(s)	89, 1301, 2122
BstX2I	RGATCY	5 cut(s)	553, 658, 1724, 2182, 2489
BstXI	CCANNNNNNTGG	1 cut(s)	214
BstYI	RGATCY	5 cut(s)	553, 658, 1724, 2182, 2489
BstZ17I	GTATAC	1 cut(s)	801
BsuI	GTATCC	2 cut(s)	229, 382
BsuRI	GGCC	3 cut(s)	1380, 1923, 2275
BtgI	CCRYGG	2 cut(s)	653, 2420
BtrI	CACGTC	1 cut(s)	380
BtsCI	GGATG	9 cut(s)	10, 297, 304, 460, 1208, 1701, 1878, 2041, 2396
BtsI	GCAGTG	3 cut(s)	372, 1176, 1575
BtsIMutI	CAGTG	6 cut(s)	372, 504, 1176, 1575, 2031, 2388
BveI	ACCTGC	1 cut(s)	2278
Cac8I	GCNNGC	4 cut(s)	1348, 2015, 2140, 2420
CaiI	CAGNNNCTG	1 cut(s)	1295
CfoI	GCGC	3 cut(s)	908, 1996, 2418
Cfr10I	RCCGGY	2 cut(s)	1071, 1358
Cfr13I	GGNCC	3 cut(s)	650, 1757, 1957
Cfr42I	CCGCGG	1 cut(s)	2423
CseI	GACGC	1 cut(s)	1898
Csp6I	GTAC	6 cut(s)	202, 1269, 1465, 1786, 2041, 2151
CspAI	ACCGGT	1 cut(s)	1071
CspCI	CAANNNNNGTGG	2 cut(s)	1180, 1215
CviQI	GTAC	6 cut(s)	202, 1269, 1465, 1786, 2041, 2151
DdeI	CTNAG	6 cut(s)	1160, 1296, 1885, 2268, 2391, 2451
DpnI	GATC	9 cut(s)	412, 459, 555, 660, 771, 1726, 2021, 2184, 2491
DpnII	GATC	9 cut(s)	410, 457, 553, 658, 769, 1724, 2019, 2182, 2489
Eam1104I	CTCTTC	7 cut(s)	536, 971, 1748, 1936, 2208, 2352, 2490
EarI	CTCTTC	7 cut(s)	536, 971, 1748, 1936, 2208, 2352, 2490
EciI	GGCGGA	3 cut(s)	121, 355, 1649
Ecl136II	GAGCTC	3 cut(s)	151, 2218, 2345
Eco130I	CCWWGG	3 cut(s)	653, 1594, 2484
Eco147I	AGGCCT	1 cut(s)	1380
Eco24I	GRGCYC	4 cut(s)	153, 969, 2220, 2347
Eco31I	GGTCTC	1 cut(s)	870
Eco47I	GGWCC	3 cut(s)	650, 1757, 1957
Eco53kI	GAGCTC	3 cut(s)	151, 2218, 2345
Eco57I	CTGAAG	2 cut(s)	703, 2121
Eco88I	CYCGRG	2 cut(s)	578, 2303
EcoICRI	GAGCTC	3 cut(s)	151, 2218, 2345
EcoO109I	RGGNCCY	1 cut(s)	1957
EcoRI	GAATTC	1 cut(s)	2066
EcoRII	CCWGG	4 cut(s)	166, 842, 1260, 2367
EcoT14I	CCWWGG	3 cut(s)	653, 1594, 2484
EcoT38I	GRGCYC	4 cut(s)	153, 969, 2220, 2347
ErhI	CCWWGG	3 cut(s)	653, 1594, 2484
Esp3I	CGTCTC	1 cut(s)	1396
FalI	AAGNNNNNCTT	2 cut(s)	1209, 1241
FaqI	GGGAC	4 cut(s)	1555, 1648, 1816, 1990
FauI	CCCGC	2 cut(s)	1407, 2427
FbaI	TGATCA	1 cut(s)	457
FblI	GTMKAC	1 cut(s)	800
Fnu4HI	GCNGC	5 cut(s)	78, 135, 1290, 2136, 2330
FokI	GGATG	9 cut(s)	17, 304, 311, 447, 1215, 1708, 1865, 2048, 2383
FriOI	GRGCYC	4 cut(s)	153, 969, 2220, 2347
Fsp4HI	GCNGC	5 cut(s)	78, 135, 1290, 2136, 2330
FspBI	CTAG	6 cut(s)	630, 645, 1050, 1089, 2139, 2223
GlaI	GCGC	3 cut(s)	907, 1995, 2417
GluI	GCNGC	5 cut(s)	78, 135, 1290, 2136, 2330
GsaI	CCCAGC	2 cut(s)	141, 2129
GsuI	CTGGAG	1 cut(s)	2139
HaeIII	GGCC	3 cut(s)	1380, 1923, 2275
HapII	CCGG	7 cut(s)	111, 393, 563, 689, 1072, 1359, 1760
HgaI	GACGC	1 cut(s)	1898
HhaI	GCGC	3 cut(s)	908, 1996, 2418
Hin6I	GCGC	3 cut(s)	906, 1994, 2416
HinP1I	GCGC	3 cut(s)	906, 1994, 2416
HincII	GTYRAC	2 cut(s)	345, 2323
HindII	GTYRAC	2 cut(s)	345, 2323
HindIII	AAGCTT	3 cut(s)	451, 1577, 1931
HinfI	GANTC	9 cut(s)	83, 323, 814, 1148, 1553, 1733, 2118, 2188, 2393
HpaII	CCGG	7 cut(s)	111, 393, 563, 689, 1072, 1359, 1760
HphI	GGTGA	3 cut(s)	82, 745, 1429
Hpy166II	GTNNAC	6 cut(s)	204, 345, 650, 801, 2041, 2323
Hpy8I	GTNNAC	6 cut(s)	204, 345, 650, 801, 2041, 2323
HpyAV	CCTTC	3 cut(s)	479, 1673, 1676
HpyCH4III	ACNGT	6 cut(s)	508, 618, 636, 959, 1116, 2026
HpyCH4IV	ACGT	2 cut(s)	379, 2208
HpyF10VI	GCNNNNNNNGC	7 cut(s)	374, 1052, 1364, 1845, 2135, 2293, 2424
HpyF3I	CTNAG	6 cut(s)	1160, 1296, 1885, 2268, 2391, 2451
HpySE526I	ACGT	2 cut(s)	379, 2208
HspAI	GCGC	3 cut(s)	906, 1994, 2416
Kpn2I	TCCGGA	1 cut(s)	688
KpnI	GGTACC	1 cut(s)	1789
Ksp22I	TGATCA	1 cut(s)	457
KspI	CCGCGG	1 cut(s)	2423
Kzo9I	GATC	9 cut(s)	410, 457, 553, 658, 769, 1724, 2019, 2182, 2489
LguI	GCTCTTC	3 cut(s)	2208, 2352, 2490
LmnI	GCTCC	4 cut(s)	1682, 2092, 2371, 2424
Lsp1109I	GCAGC	3 cut(s)	89, 1301, 2122
LweI	GCATC	5 cut(s)	18, 1301, 1471, 1857, 2046
MaeI	CTAG	6 cut(s)	630, 645, 1050, 1089, 2139, 2223
MaeII	ACGT	2 cut(s)	379, 2208
MaeIII	GTNAC	3 cut(s)	508, 1253, 1859
MalI	GATC	9 cut(s)	412, 459, 555, 660, 771, 1726, 2021, 2184, 2491
MboI	GATC	9 cut(s)	410, 457, 553, 658, 769, 1724, 2019, 2182, 2489
MfeI	CAATTG	2 cut(s)	1629, 2351
MflI	RGATCY	5 cut(s)	553, 658, 1724, 2182, 2489
MhlI	GDGCHC	5 cut(s)	153, 969, 1628, 2220, 2347
MlyI	GAGTC	5 cut(s)	77, 332, 1727, 2197, 2402
MmeI	TCCRAC	3 cut(s)	276, 813, 1918
MroI	TCCGGA	1 cut(s)	688
MroXI	GAANNNNTTC	2 cut(s)	1493, 1607
MseI	TTAA	3 cut(s)	353, 501, 1302
MslI	CAYNNNNRTG	3 cut(s)	194, 1568, 2245
MspA1I	CMGCKG	3 cut(s)	137, 823, 2422
MspI	CCGG	7 cut(s)	111, 393, 563, 689, 1072, 1359, 1760
MspR9I	CCNGG	6 cut(s)	168, 564, 844, 1262, 1761, 2369
MunI	CAATTG	2 cut(s)	1629, 2351
Mva1269I	GAATGC	2 cut(s)	908, 1457
MvaI	CCWGG	4 cut(s)	168, 844, 1262, 2369
MvnI	CGCG	2 cut(s)	2416, 2422
MwoI	GCNNNNNNNGC	7 cut(s)	374, 1052, 1364, 1845, 2135, 2293, 2424
NciI	CCSGG	2 cut(s)	564, 1761
NcoI	CCATGG	1 cut(s)	653
NdeII	GATC	9 cut(s)	410, 457, 553, 658, 769, 1724, 2019, 2182, 2489
NheI	GCTAGC	1 cut(s)	2138
NlaIV	GGNNCC	7 cut(s)	555, 660, 687, 1758, 1787, 1958, 2184
NmuCI	GTSAC	2 cut(s)	1253, 1859
NspI	RCATGY	4 cut(s)	199, 1096, 1649, 1717
NspV	TTCGAA	1 cut(s)	1310
PaeR7I	CTCGAG	2 cut(s)	578, 2303
PaqCI	CACCTGC	1 cut(s)	2278
PceI	AGGCCT	1 cut(s)	1380
PciSI	GCTCTTC	3 cut(s)	2208, 2352, 2490
PctI	GAATGC	2 cut(s)	908, 1457
PdmI	GAANNNNTTC	2 cut(s)	1493, 1607
PfeI	GAWTC	4 cut(s)	814, 1148, 1553, 2118
PflMI	CCANNNNNTGG	2 cut(s)	237, 849
PfoI	TCCNGGA	1 cut(s)	842
PinAI	ACCGGT	1 cut(s)	1071
PkrI	GCNGC	5 cut(s)	79, 136, 1291, 2137, 2331
PleI	GAGTC	5 cut(s)	77, 331, 1727, 2196, 2401
PpsI	GAGTC	5 cut(s)	77, 331, 1727, 2196, 2401
PpuMI	RGGWCCY	1 cut(s)	1957
Psp124BI	GAGCTC	3 cut(s)	153, 2220, 2347
Psp5II	RGGWCCY	1 cut(s)	1957
Psp6I	CCWGG	4 cut(s)	166, 842, 1260, 2367
PspFI	CCCAGC	2 cut(s)	137, 2125
PspGI	CCWGG	4 cut(s)	166, 842, 1260, 2367
PspN4I	GGNNCC	7 cut(s)	555, 660, 687, 1758, 1787, 1958, 2184
PspPI	GGNCC	3 cut(s)	650, 1757, 1957
PspPPI	RGGWCCY	1 cut(s)	1957
PspXI	VCTCGAGB	2 cut(s)	578, 2303
PstNI	CAGNNNCTG	1 cut(s)	1295
PsuI	RGATCY	5 cut(s)	553, 658, 1724, 2182, 2489
PvuII	CAGCTG	1 cut(s)	823
RsaI	GTAC	6 cut(s)	203, 1270, 1466, 1787, 2042, 2152
RsaNI	GTAC	6 cut(s)	202, 1269, 1465, 1786, 2041, 2151
RseI	CAYNNNNRTG	3 cut(s)	194, 1568, 2245
SacI	GAGCTC	3 cut(s)	153, 2220, 2347
SacII	CCGCGG	1 cut(s)	2423
SapI	GCTCTTC	3 cut(s)	2208, 2352, 2490
SaqAI	TTAA	3 cut(s)	353, 501, 1302
SatI	GCNGC	5 cut(s)	78, 135, 1290, 2136, 2330
Sau3AI	GATC	9 cut(s)	410, 457, 553, 658, 769, 1724, 2019, 2182, 2489
Sau96I	GGNCC	3 cut(s)	650, 1757, 1957
ScaI	AGTACT	2 cut(s)	1270, 2152
SchI	GAGTC	5 cut(s)	77, 332, 1727, 2197, 2402
ScrFI	CCNGG	6 cut(s)	168, 564, 844, 1262, 1761, 2369
SduI	GDGCHC	5 cut(s)	153, 969, 1628, 2220, 2347
SfaNI	GCATC	5 cut(s)	18, 1301, 1471, 1857, 2046
Sfr274I	CTCGAG	2 cut(s)	578, 2303
Sfr303I	CCGCGG	1 cut(s)	2423
SfuI	TTCGAA	1 cut(s)	1310
SgrBI	CCGCGG	1 cut(s)	2423
SinI	GGWCC	3 cut(s)	650, 1757, 1957
SlaI	CTCGAG	2 cut(s)	578, 2303
SmiMI	CAYNNNNRTG	3 cut(s)	194, 1568, 2245
SmlI	CTYRAG	4 cut(s)	406, 578, 1399, 2303
SmoI	CTYRAG	4 cut(s)	406, 578, 1399, 2303
SpeI	ACTAGT	2 cut(s)	644, 1049
SseBI	AGGCCT	1 cut(s)	1380
SspI	AATATT	1 cut(s)	427
SspMI	CTAG	6 cut(s)	630, 645, 1050, 1089, 2139, 2223
SstI	GAGCTC	3 cut(s)	153, 2220, 2347
StuI	AGGCCT	1 cut(s)	1380
StyD4I	CCNGG	6 cut(s)	166, 562, 842, 1260, 1759, 2367
StyI	CCWWGG	3 cut(s)	653, 1594, 2484
TaaI	ACNGT	6 cut(s)	508, 618, 636, 959, 1116, 2026
TaiI	ACGT	2 cut(s)	382, 2211
TaqI	TCGA	9 cut(s)	147, 579, 974, 1016, 1310, 2193, 2304, 2402, 2438
TatI	WGTACW	3 cut(s)	1268, 2040, 2150
TauI	GCSGC	2 cut(s)	137, 2332
TfiI	GAWTC	4 cut(s)	814, 1148, 1553, 2118
Tru1I	TTAA	3 cut(s)	353, 501, 1302
Tru9I	TTAA	3 cut(s)	353, 501, 1302
TscAI	CASTG	6 cut(s)	379, 511, 1183, 1575, 2031, 2395
TseFI	GTSAC	2 cut(s)	1253, 1859
TseI	GCWGC	3 cut(s)	77, 1289, 2135
Tsp45I	GTSAC	2 cut(s)	1253, 1859
TspDTI	ATGAA	5 cut(s)	525, 601, 750, 2229, 2277
TspGWI	ACGGA	4 cut(s)	609, 1420, 1737, 2064
TspRI	CASTG	6 cut(s)	379, 511, 1183, 1575, 2031, 2395
Van91I	CCANNNNNTGG	2 cut(s)	237, 849
VpaK11BI	GGWCC	3 cut(s)	650, 1757, 1957
XapI	RAATTY	4 cut(s)	349, 525, 853, 2066
XbaI	TCTAGA	1 cut(s)	629
XceI	RCATGY	4 cut(s)	199, 1096, 1649, 1717
XcmI	CCANNNNNNNNNTGG	3 cut(s)	238, 471, 1796
XhoI	CTCGAG	2 cut(s)	578, 2303
XmiI	GTMKAC	1 cut(s)	800
XmnI	GAANNNNTTC	2 cut(s)	1493, 1607
XspI	CTAG	6 cut(s)	630, 645, 1050, 1089, 2139, 2223
ZrmI	AGTACT	2 cut(s)	1270, 2152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.