Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0006169

Physical Location & Seq

Genomic Coordinates Reverse (-)

10942079 .. 10945217

Gene Structure 3139 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00089060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGCCAGTATCTCTAGTTCTCTACCTTGTCTGCAAATATTTCTTTGCAGCCATGGAGTTCAAAACAAACCCAAAATTCTTGCTTTCCTTGCTTTTCTTAAGCCTATGCCTCAAGTCCCATATCTGCTTTGGAGCTGACACCATCACAGCAAACCAGTCTCTCTCTGGTGACCAAACCATTGTTTCAGCTGGTGGGAAATTTGAACTGGGTTTCTTCAAACCAGGCAATACTTCAAAATACTACATAGGCATGTGGTACTACAAGACAACAGTACCAGAGCAAACCATAGTCTGGGTGGCCAATAGGGAGCAGCCAGTCTCTGATAGATTTTCTTCAGAGTTGAGAATCTCAGATGGTAATTTGGTGCTGTTTAATGAGTCCAAAACCCCAATTTGGTCCACAGATGTCAGTTCAAGTTCAGCCTCTTCTATACATGTAGTTCTTTTAGATAATGGAAACCTTGTGCTAAGAGCTGGGTCTAATTCATCTTTGCCTTTATGGCAAAGTTTTGATTATCCAGCTCATACTTGGCTACCAGAAGCTAGAATTGGGTTCAACACTGTTACAAACCGAACCCAAGTCCTGACTTCATGGAAGAATTTTGAGGATCCTGCACCGGGTATTTACTCTCTCGTGCTTGACCCGAATGGAAGTGATGCATATTTCTCACTGTGGAATATGTCTAAGCAGTATTGGACTAGTGGAGCTTGGGATGCAAAGAGTCGTATTTTCAGTTTGGTTCCTGAGATGCATCTAACCTATATCTACAACTTCAGCTATGTTAAAACCAAAAATGAGAGCTACTTCACCTATTCTCTTTATGATTCTAGCATCACATCTCGATTCATAATGGATGTATCGGGTCAGGTTAAGCAATTTTCCTGGTTGCAACCTCAGGGATGGAACTTGTTTTGGTCTCAGCCGAGGAAACTATGTCAGGTTTATTCCTATTGTGGGGCATTTGGCAGTTGCAATGAGAAGTCCTTGCCCTTCTGTAATTGTTTATATGGTTTTGAGCCGAAATTGAAGGTGGATTGGAATTCGCAGGTTTATTCTGGTGGCTGCAAAAGACGGACTGTGCTGAATTTTGCTAATGCTACTACCAATAATGGGAAGCAAGACCGGTTTCTAGAAATGCCTAGCATGTCTTTGCCTGACAGTGAAATGTCTGTAGAGGCTGGGAGTACTGCGCAATGTGAATCAATCTGCTTAAGTAACCGCTCTTGCACTGGTTATGCTTATGATAGCAGTGGATGTTCAATATGGATTGGAGATCTCTTGAATCTGCAACAACTCACAGCAGATGACGGTGATGGAAAAACTTTGTACCTCAGACTTGCAGCTTCCGAGTTTAAGGATCCAAAAAGTAAAAAGGGATTGATTATCAGTGTTGCAGTAGGCTCAGCTGTTGGGATAGCAGTTCTCTTAGGCCTTATTGTGTTTAGAGTGTTGAGAAACAGATATAGAGTGATTGGAAAATCAATGGAGGGTTCATTGGTGGCATTTGAGTATAGAGATCTTCAAGACGTAACAAAGAACTTCTCGGAGAAATTGGGGGAGGAGGTTTTGGTTCTGTCTTCAAGGGCACAATGCCTGATTCATCAGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

536

Amino Acids

60.11

Weight (kDa)

8.08

Isoelectric Point (pI)

38.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	95 - 199	4.3e-34	D-mannose binding lectin
S_locus_glycop	PF00954	232 - 341	5e-29	S-locus glycoprotein domain
PAN_2	PF08276	372 - 428	1.7e-13	PAN-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19130
fragaria_vesca	FvH4_6g44310
malus_domestica	MD09G1098900.v1.1 MD17G1087200.v1.1
prunus_persica	Prupe.3G227300_v2.0.a1 Prupe.3G227500_v2.0.a1
pyrus_communis	pycom09g02260 pycom17g08440
rosa_chinensis	RchiOBHm_Chr2g0161171 RchiOBHm_Chr2g0161191
rosa_laevigata	RLG00000021264 RLG00000021266 RLG00000029382
rosa_multiflora	Rmu_sc0006420.1_g000040 Rmu_sc0006420.1_g000045
rosa_roxburghii	Rroxscaffold_2G00089040 Rroxscaffold_2G00089060
rosa_rugosa	Rorug02G0486800 Rorug02G0486900
rosa_samantha	Rh2AG553500 Rh2BG567200 Rh2CG537300 Rh2CG537500 Rh2DG576500 Rh2DG576600
rosa_wichuraiana	Rw2G045780 Rw2G045800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1191
Acc36I	ACCTGC	1 cut(s)	1036
AccB7I	CCANNNNNTGG	1 cut(s)	291
AccBSI	CCGCTC	1 cut(s)	1221
AciI	CCGC	1 cut(s)	1219
AclWI	GGATC	4 cut(s)	602, 615, 1352, 1365
AcoI	YGGCCR	1 cut(s)	297
AcsI	RAATTY	5 cut(s)	74, 197, 598, 1039, 1084
AcuI	CTGAAG	2 cut(s)	318, 757
AfaI	GTAC	4 cut(s)	257, 273, 1186, 1328
AfiI	CCNNNNNNNGG	5 cut(s)	291, 393, 617, 954, 1110
AflII	CTTAAG	2 cut(s)	97, 1210
AflIII	ACRYGT	1 cut(s)	433
AgeI	ACCGGT	1 cut(s)	1122
AhlI	ACTAGT	1 cut(s)	698
AjnI	CCWGG	2 cut(s)	220, 881
AjuI	GAANNNNNNNTTGG	2 cut(s)	531, 563
Alw26I	GTCTC	3 cut(s)	162, 322, 921
AlwI	GGATC	4 cut(s)	602, 615, 1352, 1365
AlwNI	CAGNNNCTG	1 cut(s)	320
AoxI	GGCC	2 cut(s)	297, 1429
ApeKI	GCWGC	4 cut(s)	47, 310, 1062, 1340
ApoI	RAATTY	5 cut(s)	74, 197, 598, 1039, 1084
AsiGI	ACCGGT	1 cut(s)	1122
AspLEI	GCGC	1 cut(s)	1192
AspS9I	GGNCC	1 cut(s)	396
AsuC2I	CCSGG	1 cut(s)	618
AsuHPI	GGTGA	3 cut(s)	179, 799, 1322
AvaII	GGWCC	1 cut(s)	396
AxyI	CCTNAGG	1 cut(s)	894
BaeGI	GKGCMC	1 cut(s)	1588
BaeI	ACNNNNGTAYC	2 cut(s)	255, 288
BalI	TGGCCA	1 cut(s)	299
BamHI	GGATCC	2 cut(s)	607, 1357
BauI	CACGAG	1 cut(s)	632
BbsI	GAAGAC	1 cut(s)	1569
BbvI	GCAGC	4 cut(s)	59, 322, 1049, 1352
BccI	CCATC	4 cut(s)	149, 347, 894, 1307
BciT130I	CCWGG	2 cut(s)	222, 883
BcnI	CCSGG	1 cut(s)	618
BcoDI	GTCTC	3 cut(s)	162, 322, 921
BcuI	ACTAGT	1 cut(s)	698
BfaI	CTAG	6 cut(s)	14, 543, 699, 828, 1130, 1140
BfmI	CTRYAG	1 cut(s)	1170
BfrI	CTTAAG	2 cut(s)	97, 1210
BfuAI	ACCTGC	1 cut(s)	1036
BglI	GCCNNNNNGGC	1 cut(s)	499
BglII	AGATCT	2 cut(s)	1273, 1516
BisI	GCNGC	4 cut(s)	48, 311, 1063, 1341
BlpI	GCTNAGC	1 cut(s)	1402
BlsI	GCNGC	4 cut(s)	49, 312, 1064, 1342
BmcAI	AGTACT	1 cut(s)	1186
Bme1390I	CCNGG	3 cut(s)	222, 618, 883
Bme18I	GGWCC	1 cut(s)	396
BmgT120I	GGNCC	1 cut(s)	396
BmiI	GGNNCC	3 cut(s)	609, 741, 1359
BmrFI	CCNGG	3 cut(s)	222, 618, 883
BmrI	ACTGGG	1 cut(s)	215
BmsI	GCATC	5 cut(s)	646, 703, 738, 760, 840
BmuI	ACTGGG	1 cut(s)	215
BpiI	GAAGAC	1 cut(s)	1569
Bpu1102I	GCTNAGC	1 cut(s)	1402
BpuEI	CTTGAG	1 cut(s)	95
BpuMI	CCSGG	1 cut(s)	618
BsaI	GGTCTC	1 cut(s)	921
BsaJI	CCNNGG	2 cut(s)	51, 923
BsaWI	WCCGGW	1 cut(s)	1122
Bsc4I	CCNNNNNNNGG	5 cut(s)	291, 393, 617, 954, 1110
Bse118I	RCCGGY	1 cut(s)	1122
Bse1I	ACTGG	5 cut(s)	5, 154, 210, 314, 1234
Bse21I	CCTNAGG	1 cut(s)	894
Bse3DI	GCAATG	2 cut(s)	979, 1199
BseBI	CCWGG	2 cut(s)	222, 883
BseDI	CCNNGG	2 cut(s)	51, 923
BseGI	GGATG	4 cut(s)	718, 859, 905, 1259
BseLI	CCNNNNNNNGG	5 cut(s)	291, 393, 617, 954, 1110
BseMI	GCAATG	2 cut(s)	979, 1199
BseMII	CTCAG	6 cut(s)	363, 735, 908, 932, 1345, 1416
BseNI	ACTGG	5 cut(s)	5, 154, 210, 314, 1234
BseRI	GAGGAG	1 cut(s)	1574
BseSI	GKGCMC	1 cut(s)	1588
BseXI	GCAGC	4 cut(s)	59, 322, 1049, 1352
BseYI	CCCAGC	2 cut(s)	473, 1178
BsgI	GTGCAG	1 cut(s)	597
BshFI	GGCC	2 cut(s)	299, 1431
BshTI	ACCGGT	1 cut(s)	1122
BsiSI	CCGG	2 cut(s)	617, 1123
BslFI	GGGAC	1 cut(s)	100
BslI	CCNNNNNNNGG	5 cut(s)	291, 393, 617, 954, 1110
BsmAI	GTCTC	3 cut(s)	162, 322, 921
BsmFI	GGGAC	1 cut(s)	100
BsnI	GGCC	2 cut(s)	299, 1431
Bso31I	GGTCTC	1 cut(s)	921
Bsp1286I	GDGCHC	1 cut(s)	1588
Bsp143I	GATC	4 cut(s)	607, 1273, 1357, 1516
Bsp1720I	GCTNAGC	1 cut(s)	1402
Bsp19I	CCATGG	1 cut(s)	51
BspACI	CCGC	1 cut(s)	1219
BspANI	GGCC	2 cut(s)	299, 1431
BspCNI	CTCAG	6 cut(s)	362, 736, 907, 931, 1344, 1415
BspLI	GGNNCC	3 cut(s)	609, 741, 1359
BspMI	ACCTGC	1 cut(s)	1036
BspPI	GGATC	4 cut(s)	602, 615, 1352, 1365
BspTI	CTTAAG	2 cut(s)	97, 1210
BspTNI	GGTCTC	1 cut(s)	921
BsrBI	CCGCTC	1 cut(s)	1221
BsrDI	GCAATG	2 cut(s)	979, 1199
BsrFI	RCCGGY	1 cut(s)	1122
BsrI	ACTGG	5 cut(s)	5, 154, 210, 314, 1234
BssAI	RCCGGY	1 cut(s)	1122
BssECI	CCNNGG	2 cut(s)	51, 923
BssMI	GATC	4 cut(s)	607, 1273, 1357, 1516
BssSI	CACGAG	1 cut(s)	632
BssT1I	CCWWGG	1 cut(s)	51
Bst2BI	CACGAG	1 cut(s)	632
Bst2UI	CCWGG	2 cut(s)	222, 883
Bst4CI	ACNGT	6 cut(s)	271, 562, 672, 1078, 1160, 1310
Bst6I	CTCTTC	1 cut(s)	430
BstAFI	CTTAAG	2 cut(s)	97, 1210
BstDEI	CTNAG	9 cut(s)	349, 467, 684, 744, 894, 918, 1331, 1402, 1426
BstDSI	CCRYGG	1 cut(s)	51
BstEII	GGTNACC	1 cut(s)	167
BstF5I	GGATG	4 cut(s)	718, 859, 905, 1259
BstHHI	GCGC	1 cut(s)	1192
BstKTI	GATC	4 cut(s)	610, 1276, 1360, 1519
BstMAI	GTCTC	3 cut(s)	162, 322, 921
BstMBI	GATC	4 cut(s)	607, 1273, 1357, 1516
BstMWI	GCNNNNNNNGC	3 cut(s)	88, 499, 713
BstNI	CCWGG	2 cut(s)	222, 883
BstNSI	RCATGY	3 cut(s)	253, 437, 1147
BstPI	GGTNACC	1 cut(s)	167
BstSCI	CCNGG	3 cut(s)	220, 616, 881
BstSFI	CTRYAG	1 cut(s)	1170
BstSLI	GKGCMC	1 cut(s)	1588
BstV1I	GCAGC	4 cut(s)	59, 322, 1049, 1352
BstV2I	GAAGAC	1 cut(s)	1569
BstX2I	RGATCY	4 cut(s)	607, 1273, 1357, 1516
BstYI	RGATCY	4 cut(s)	607, 1273, 1357, 1516
Bsu36I	CCTNAGG	1 cut(s)	894
BsuRI	GGCC	2 cut(s)	299, 1431
BtgI	CCRYGG	1 cut(s)	51
BtsCI	GGATG	4 cut(s)	718, 859, 905, 1259
BtsI	GCAGTG	1 cut(s)	1255
BtsIMutI	CAGTG	6 cut(s)	558, 668, 1165, 1227, 1255, 1393
BveI	ACCTGC	1 cut(s)	1036
CaiI	CAGNNNCTG	1 cut(s)	320
CfoI	GCGC	1 cut(s)	1192
Cfr10I	RCCGGY	1 cut(s)	1122
Cfr13I	GGNCC	1 cut(s)	396
Csp6I	GTAC	4 cut(s)	256, 272, 1185, 1327
CspAI	ACCGGT	1 cut(s)	1122
CviAII	CATG	5 cut(s)	52, 250, 434, 591, 1144
CviQI	GTAC	4 cut(s)	256, 272, 1185, 1327
DdeI	CTNAG	9 cut(s)	349, 467, 684, 744, 894, 918, 1331, 1402, 1426
DpnI	GATC	4 cut(s)	609, 1275, 1359, 1518
DpnII	GATC	4 cut(s)	607, 1273, 1357, 1516
EaeI	YGGCCR	1 cut(s)	297
Eam1104I	CTCTTC	1 cut(s)	430
EarI	CTCTTC	1 cut(s)	430
Eco130I	CCWWGG	1 cut(s)	51
Eco147I	AGGCCT	1 cut(s)	1431
Eco31I	GGTCTC	1 cut(s)	921
Eco47I	GGWCC	1 cut(s)	396
Eco57I	CTGAAG	2 cut(s)	318, 757
Eco81I	CCTNAGG	1 cut(s)	894
Eco91I	GGTNACC	1 cut(s)	167
EcoO65I	GGTNACC	1 cut(s)	167
EcoRI	GAATTC	1 cut(s)	1039
EcoRII	CCWGG	2 cut(s)	220, 881
EcoT14I	CCWWGG	1 cut(s)	51
EcoT22I	ATGCAT	2 cut(s)	661, 753
ErhI	CCWWGG	1 cut(s)	51
FaeI	CATG	5 cut(s)	55, 253, 437, 594, 1147
FaqI	GGGAC	1 cut(s)	100
FatI	CATG	5 cut(s)	51, 249, 433, 590, 1143
Fnu4HI	GCNGC	4 cut(s)	48, 311, 1063, 1341
FokI	GGATG	4 cut(s)	725, 866, 912, 1266
Fsp4HI	GCNGC	4 cut(s)	48, 311, 1063, 1341
FspBI	CTAG	6 cut(s)	14, 543, 699, 828, 1130, 1140
FspI	TGCGCA	1 cut(s)	1191
GlaI	GCGC	1 cut(s)	1191
GluI	GCNGC	4 cut(s)	48, 311, 1063, 1341
GsaI	CCCAGC	2 cut(s)	477, 1182
HaeIII	GGCC	2 cut(s)	299, 1431
HapII	CCGG	2 cut(s)	617, 1123
HhaI	GCGC	1 cut(s)	1192
Hin1II	CATG	5 cut(s)	55, 253, 437, 594, 1147
Hin6I	GCGC	1 cut(s)	1190
HinP1I	GCGC	1 cut(s)	1190
HinfI	GANTC	8 cut(s)	345, 377, 721, 824, 843, 1199, 1282, 1597
HpaII	CCGG	2 cut(s)	617, 1123
HphI	GGTGA	3 cut(s)	179, 799, 1322
Hpy166II	GTNNAC	1 cut(s)	399
Hpy188I	TCNGA	6 cut(s)	322, 337, 352, 1334, 1348, 1546
Hpy188III	TCNNGA	6 cut(s)	583, 743, 840, 1130, 1279, 1523
Hpy8I	GTNNAC	1 cut(s)	399
HpyAV	CCTTC	2 cut(s)	1000, 1021
HpyCH4III	ACNGT	6 cut(s)	271, 562, 672, 1078, 1160, 1310
HpyCH4IV	ACGT	1 cut(s)	1527
HpyF10VI	GCNNNNNNNGC	3 cut(s)	88, 499, 713
HpyF3I	CTNAG	9 cut(s)	349, 467, 684, 744, 894, 918, 1331, 1402, 1426
HpySE526I	ACGT	1 cut(s)	1527
Hsp92II	CATG	5 cut(s)	55, 253, 437, 594, 1147
HspAI	GCGC	1 cut(s)	1190
Kzo9I	GATC	4 cut(s)	607, 1273, 1357, 1516
LmnI	GCTCC	3 cut(s)	131, 307, 704
Lsp1109I	GCAGC	4 cut(s)	59, 322, 1049, 1352
LweI	GCATC	5 cut(s)	646, 703, 738, 760, 840
MaeI	CTAG	6 cut(s)	14, 543, 699, 828, 1130, 1140
MaeII	ACGT	1 cut(s)	1527
MaeIII	GTNAC	4 cut(s)	167, 562, 1214, 1528
MalI	GATC	4 cut(s)	609, 1275, 1359, 1518
MbiI	CCGCTC	1 cut(s)	1221
MboI	GATC	4 cut(s)	607, 1273, 1357, 1516
MboII	GAAGA	6 cut(s)	205, 324, 417, 607, 1511, 1569
MflI	RGATCY	4 cut(s)	607, 1273, 1357, 1516
MhlI	GDGCHC	1 cut(s)	1588
MlsI	TGGCCA	1 cut(s)	299
MluNI	TGGCCA	1 cut(s)	299
MlyI	GAGTC	2 cut(s)	386, 730
Mox20I	TGGCCA	1 cut(s)	299
Mph1103I	ATGCAT	2 cut(s)	661, 753
MscI	TGGCCA	1 cut(s)	299
MseI	TTAA	6 cut(s)	98, 372, 783, 870, 1211, 1353
MslI	CAYNNNNRTG	1 cut(s)	248
Msp20I	TGGCCA	1 cut(s)	299
MspA1I	CMGCKG	2 cut(s)	188, 1406
MspCI	CTTAAG	2 cut(s)	97, 1210
MspI	CCGG	2 cut(s)	617, 1123
MspR9I	CCNGG	3 cut(s)	222, 618, 883
MvaI	CCWGG	2 cut(s)	222, 883
MwoI	GCNNNNNNNGC	3 cut(s)	88, 499, 713
NciI	CCSGG	1 cut(s)	618
NcoI	CCATGG	1 cut(s)	51
NdeII	GATC	4 cut(s)	607, 1273, 1357, 1516
NlaIII	CATG	5 cut(s)	55, 253, 437, 594, 1147
NlaIV	GGNNCC	3 cut(s)	609, 741, 1359
NmeAIII	GCCGAG	1 cut(s)	948
NmuCI	GTSAC	1 cut(s)	167
NsbI	TGCGCA	1 cut(s)	1191
NsiI	ATGCAT	2 cut(s)	661, 753
NspI	RCATGY	3 cut(s)	253, 437, 1147
PceI	AGGCCT	1 cut(s)	1431
PciI	ACATGT	1 cut(s)	433
PfeI	GAWTC	6 cut(s)	345, 824, 843, 1199, 1282, 1597
PflMI	CCANNNNNTGG	1 cut(s)	291
PinAI	ACCGGT	1 cut(s)	1122
PkrI	GCNGC	4 cut(s)	49, 312, 1064, 1342
PleI	GAGTC	2 cut(s)	385, 729
PpsI	GAGTC	2 cut(s)	385, 729
PscI	ACATGT	1 cut(s)	433
Psp6I	CCWGG	2 cut(s)	220, 881
PspEI	GGTNACC	1 cut(s)	167
PspFI	CCCAGC	2 cut(s)	473, 1178
PspGI	CCWGG	2 cut(s)	220, 881
PspN4I	GGNNCC	3 cut(s)	609, 741, 1359
PspPI	GGNCC	1 cut(s)	396
PsrI	GAACNNNNNNTAC	1 cut(s)	32
PstNI	CAGNNNCTG	1 cut(s)	320
PsuI	RGATCY	4 cut(s)	607, 1273, 1357, 1516
PvuII	CAGCTG	2 cut(s)	188, 1406
RsaI	GTAC	4 cut(s)	257, 273, 1186, 1328
RsaNI	GTAC	4 cut(s)	256, 272, 1185, 1327
RseI	CAYNNNNRTG	1 cut(s)	248
SaqAI	TTAA	6 cut(s)	98, 372, 783, 870, 1211, 1353
SatI	GCNGC	4 cut(s)	48, 311, 1063, 1341
Sau3AI	GATC	4 cut(s)	607, 1273, 1357, 1516
Sau96I	GGNCC	1 cut(s)	396
ScaI	AGTACT	1 cut(s)	1186
SchI	GAGTC	2 cut(s)	386, 730
ScrFI	CCNGG	3 cut(s)	222, 618, 883
SduI	GDGCHC	1 cut(s)	1588
SfaNI	GCATC	5 cut(s)	646, 703, 738, 760, 840
SfcI	CTRYAG	1 cut(s)	1170
SinI	GGWCC	1 cut(s)	396
SmiMI	CAYNNNNRTG	1 cut(s)	248
SmlI	CTYRAG	3 cut(s)	97, 110, 1210
SmoI	CTYRAG	3 cut(s)	97, 110, 1210
SpeI	ACTAGT	1 cut(s)	698
SseBI	AGGCCT	1 cut(s)	1431
SsiI	CCGC	1 cut(s)	1219
SspI	AATATT	1 cut(s)	38
SspMI	CTAG	6 cut(s)	14, 543, 699, 828, 1130, 1140
StuI	AGGCCT	1 cut(s)	1431
StyD4I	CCNGG	3 cut(s)	220, 616, 881
StyI	CCWWGG	1 cut(s)	51
TaaI	ACNGT	6 cut(s)	271, 562, 672, 1078, 1160, 1310
TaiI	ACGT	1 cut(s)	1530
TaqI	TCGA	1 cut(s)	841
TatI	WGTACW	1 cut(s)	1184
TfiI	GAWTC	6 cut(s)	345, 824, 843, 1199, 1282, 1597
Tru1I	TTAA	6 cut(s)	98, 372, 783, 870, 1211, 1353
Tru9I	TTAA	6 cut(s)	98, 372, 783, 870, 1211, 1353
TscAI	CASTG	6 cut(s)	565, 675, 1165, 1234, 1255, 1393
TseFI	GTSAC	1 cut(s)	167
TseI	GCWGC	4 cut(s)	47, 310, 1062, 1340
Tsp45I	GTSAC	1 cut(s)	167
TspDTI	ATGAA	5 cut(s)	474, 579, 835, 1482, 1589
TspGWI	ACGGA	1 cut(s)	1087
TspRI	CASTG	6 cut(s)	565, 675, 1165, 1234, 1255, 1393
Van91I	CCANNNNNTGG	1 cut(s)	291
Vha464I	CTTAAG	2 cut(s)	97, 1210
VpaK11BI	GGWCC	1 cut(s)	396
XapI	RAATTY	5 cut(s)	74, 197, 598, 1039, 1084
XbaI	TCTAGA	1 cut(s)	1129
XceI	RCATGY	3 cut(s)	253, 437, 1147
XcmI	CCANNNNNNNNNTGG	4 cut(s)	125, 161, 292, 525
XspI	CTAG	6 cut(s)	14, 543, 699, 828, 1130, 1140
ZrmI	AGTACT	1 cut(s)	1186
Zsp2I	ATGCAT	2 cut(s)	661, 753

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.