Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0006169

Physical Location & Seq

Genomic Coordinates Forward (+)

80682573 .. 80685310

Gene Structure 2738 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG576600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2517 bp

ATGGAGTCCAAAACAAACCCAAAATTCTTGCTTTCCTTGCTTTTCTTAAGCCTATGCCTCGAGTCCCATATCTGCTTTGGAGCTGACACCATCACAGCAAACCAGTCTCTCTCTGGTGACAGAACCATTGTTTCAGCTGGTGAGAAATTTGAACTGGGTTTCTTCAAGGCAGGTAATACTTCAAACTACTACATAGGCATGTGGTACTACAAGACAGTAGTACCAGAGCAAACCATAGTCTGGGTGGCCAATAGGGTGCAGCCAGTCTCTGATAGATTTTCTTCAGAGTTGAGAATTTCAGATGGTAATCTGGTGCTGTTTAATGAGTCCAAAAACCCAATTTGGACAACAAATGTCGGTACAAGTTCAGCCTCTTCTATACATGTAGTTCTTTTAGATAATGGAAACCTTGTGCTAAGAGCTGGGTCTGATTCATCTTTGCCTTTATGGCAAAGTTTTGATTATCCAGCTGATACTTGGCTACCAGAAGCTAGAATTGGGTTCAACACTGTTAGAAACCAAACCCAAGTCCTGACTTCATGGAAGAATTCTGAGGATCCTGCACCGGGTCTCTACTCTCTTGAGCTTGACCCGAATGGAACCGATGCATATTTCATACTGTGGAATAGGTCTAAGCAGTATTGGAGTAGTGGAGCTTGGGATGAAAAGAATCGTATTTTCAGTTTGGTTCCTGAGATGAGGCTTAACTATATCTACAACTTCAGCTATGTTAAAAACAAAAATGAGAGCTACTTCACCTATTCTGTTTATGATCGTAGCATCACATCTCGATTCATAATGGATGTATCGGGTCAGATTAAGCAACGGTCCTGGTTGAAATCTCAGGGATGGAACTTGTTTTGGTCTCAACCAAGGAAACAATGTGAGGTTTATGCTTATTGTGGGGCATTTGGCCGTTGCAATGAGAATTCTTTGCCCTTCTGTAATTGTTTGGATGGTTTTGAGCAGAAATCGAAGGTGGATTGGGATTTGCATGATTATTCTGGTGGCTGCAAAAGACGGACTCCGCTGAATTGTGGGAATGGTACTACTGATAATGGAAAGAAATTGAAGAATGACCGTTTTCGAGAACTGACTAGCATGTCATTGCCTGTGGGTGATCAGTCTGTGGAGGTTGGGAGTACTTCGCAATGTGAATCCTTTTGCTTCAATGATTGCAATTGCACTGCTTATGCATATGTCGACAATAAATGTTCAATTTGGTCTGGAGATCTCTTGGATCTGCAACAACTCACAGCAGATGACGGTAATGGAAAAACTTTGTACCTCAGACTTGCAGCTTCCGAGTTTAAGGATCCAAAAAGTAAAAAGGGATTGATTATCGGTGTTGCAGTAGGCTCAGCTGTTGGGATAGCAGTTCTTTTAGGCCTTATTGTGGTTGCAGTGTTGAGAGACAGAAATAGAGTGATTGGAAAATCAGTGGAGGGTTCATTGGTGGCATTTGAGTATAGAGATCTTCAAGAAGTAACAAAGAACTTCTCGGAGAAATTGGGGGGAGGAGGTTTTGGTTCTGTCTTCAAGGGCACAATGCCCGATTCATCAGTCATAGCAGTGAAGAAGCTCGAAAGTGTTAGCCAAGGAGAGAAGCAATTCAGAACAGAAGTCAGCACAATTGGGACAATCCAACATGTCAATCTTGTTCGGCTTCGTGGGTTCTGCTCTGAAGGTTCTAAGAGGTTGTTGGTATATGATTACATGCCTAATGGATCTCTGGATGCTCACATTTTCAATTGTCCAAACGATGTTTTGGAGTGGAATACAAGATACCAAATTGCTCTGGGGACAGCAAGAGGGTTGGCTTATCTTCATGAGAAATGTAGAGATTGTATCATACATTGCGACATAAAGCCAGAAAACATTCTCCTAGATACTGAACTTTGTCCCAAAGTTGCAGACTTTGGCCTGGCAAAGCTTGTTGGAAGAGAGTTCAGCCGAGTCCTGACCACAATGAGAGGCACACGAGGCTATCTTGCACCAGAGTGGATTTCAGGAGTGGCAGTCACAGCAAAAGCTGATGTTTACAGCTACGGAATGATGCTCTTCGAAATTGTATCAGGAAGACGAAACTCTGAGCCATCTGAAGACGGCAAAGTTAGATTCTTCCCAAGTTGGGCTGCTGGCGTGATCACGAGTAACGAAGAAGGCGATGTGCTGAGCCTATTGGACCCGAAATTAGGGAGAAACGGTGATGTGGAAGAGATCATGAGGGTTCTTAGAGTTGCTTGCTGGTGTGTCCAAGATGATGAGGCTCATAGACCATCAATGGGTCAAGTGGTGCAGATTCTGGAGGGGGTTTTGAATGTGAACTTGCCCTCAGTTCCAAGATCACTCCAACTCTTTGGAGATAGCCAGCACATAGTTTTCTTCACAGAGTCATCTTCAAGCCAGAGCTCACATGCACCAAGCAATAACACATCAACAGCTTCATCTCAGACCAAGAGCGCTGCATCTTCAACTATCTCCAAGAGATCTGAAGATCATCAAACGAGCACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

838

Amino Acids

93.25

Weight (kDa)

6.21

Isoelectric Point (pI)

38.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	78 - 182	1.8e-32	D-mannose binding lectin
S_locus_glycop	PF00954	215 - 324	4.5e-29	S-locus glycoprotein domain
PAN_2	PF08276	358 - 415	6.5e-13	PAN-like domain
PK_Tyr_Ser-Thr	PF07714	500 - 768	1.1e-39	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	501 - 767	3.6e-46	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19130
fragaria_vesca	FvH4_6g44310
malus_domestica	MD09G1098900.v1.1 MD17G1087200.v1.1
prunus_persica	Prupe.3G227300_v2.0.a1 Prupe.3G227500_v2.0.a1
pyrus_communis	pycom09g02260 pycom17g08440
rosa_chinensis	RchiOBHm_Chr2g0161171 RchiOBHm_Chr2g0161191
rosa_laevigata	RLG00000021264 RLG00000021266 RLG00000029382
rosa_multiflora	Rmu_sc0006420.1_g000040 Rmu_sc0006420.1_g000045
rosa_roxburghii	Rroxscaffold_2G00089040 Rroxscaffold_2G00089060
rosa_rugosa	Rorug02G0486800 Rorug02G0486900
rosa_samantha	Rh2AG553500 Rh2BG567200 Rh2CG537300 Rh2CG537500 Rh2DG576500 Rh2DG576600
rosa_wichuraiana	Rw2G045780 Rw2G045800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1102
Acc36I	ACCTGC	1 cut(s)	161
AccB7I	CCANNNNNTGG	1 cut(s)	240
AccI	GTMKAC	1 cut(s)	1203
AciI	CCGC	1 cut(s)	1028
AclWI	GGATC	6 cut(s)	551, 564, 1248, 1310, 1323, 1735
AcoI	YGGCCR	2 cut(s)	246, 913
AcsI	RAATTY	5 cut(s)	23, 146, 294, 547, 928
AcuI	CTGAAG	5 cut(s)	267, 706, 1704, 2121, 2514
AfaI	GTAC	6 cut(s)	206, 222, 361, 1048, 1144, 1286
AfeI	AGCGCT	1 cut(s)	2464
AfiI	CCNNNNNNNGG	6 cut(s)	240, 566, 1396, 2131, 2195, 2285
AflII	CTTAAG	1 cut(s)	46
AflIII	ACRYGT	2 cut(s)	382, 1648
AjnI	CCWGG	2 cut(s)	830, 1923
AjuI	GAANNNNNNNTTGG	2 cut(s)	480, 512
AleI	CACNNNNGTG	1 cut(s)	1999
Alw21I	GWGCWC	2 cut(s)	2414, 2513
Alw26I	GTCTC	5 cut(s)	111, 271, 575, 870, 1407
AlwI	GGATC	6 cut(s)	551, 564, 1248, 1310, 1323, 1735
AlwNI	CAGNNNCTG	2 cut(s)	269, 2305
Ama87I	CYCGRG	1 cut(s)	59
Aor51HI	AGCGCT	1 cut(s)	2464
AoxI	GGCC	4 cut(s)	246, 913, 1387, 1921
ApeKI	GCWGC	5 cut(s)	259, 1011, 1298, 2135, 2465
ApoI	RAATTY	5 cut(s)	23, 146, 294, 547, 928
Asp700I	GAANNNNTTC	2 cut(s)	1610, 1878
AspLEI	GCGC	1 cut(s)	2465
AspS9I	GGNCC	2 cut(s)	828, 2185
AsuC2I	CCSGG	1 cut(s)	567
AsuHPI	GGTGA	5 cut(s)	128, 152, 748, 1130, 2219
AsuII	TTCGAA	1 cut(s)	2064
AvaI	CYCGRG	1 cut(s)	59
AvaII	GGWCC	2 cut(s)	828, 2185
BaeGI	GKGCMC	1 cut(s)	1547
BaeI	ACNNNNGTAYC	2 cut(s)	204, 237
BalI	TGGCCA	1 cut(s)	248
BamHI	GGATCC	2 cut(s)	556, 1315
BanII	GRGCYC	1 cut(s)	2414
BauI	CACGAG	2 cut(s)	1980, 2149
BbsI	GAAGAC	3 cut(s)	1528, 2086, 2109
Bbv12I	GWGCWC	2 cut(s)	2414, 2513
BbvI	GCAGC	5 cut(s)	271, 998, 1310, 2122, 2452
BccI	CCATC	6 cut(s)	98, 296, 843, 950, 2104, 2287
BceAI	ACGGC	2 cut(s)	900, 2122
BciT130I	CCWGG	2 cut(s)	832, 1925
BclI	TGATCA	2 cut(s)	1120, 2145
BcnI	CCSGG	1 cut(s)	567
BcoDI	GTCTC	5 cut(s)	111, 271, 575, 870, 1407
BfaI	CTAG	3 cut(s)	492, 1098, 1886
BfoI	RGCGCY	1 cut(s)	2466
BfrI	CTTAAG	1 cut(s)	46
BfuAI	ACCTGC	1 cut(s)	161
BglI	GCCNNNNNGGC	1 cut(s)	448
BglII	AGATCT	3 cut(s)	1231, 1474, 2489
BisI	GCNGC	5 cut(s)	260, 1012, 1299, 2136, 2466
BlpI	GCTNAGC	2 cut(s)	1360, 2174
BlsI	GCNGC	5 cut(s)	261, 1013, 1300, 2137, 2467
BmcAI	AGTACT	1 cut(s)	1144
Bme1390I	CCNGG	3 cut(s)	567, 832, 1925
Bme18I	GGWCC	2 cut(s)	828, 2185
BmeT110I	CYCGRG	1 cut(s)	59
BmgT120I	GGNCC	2 cut(s)	828, 2185
BmiI	GGNNCC	5 cut(s)	558, 601, 690, 1317, 2187
BmrFI	CCNGG	3 cut(s)	567, 832, 1925
BmrI	ACTGGG	1 cut(s)	164
BmsI	GCATC	5 cut(s)	595, 789, 1726, 2046, 2477
BmuI	ACTGGG	1 cut(s)	164
BpiI	GAAGAC	3 cut(s)	1528, 2086, 2109
BpmI	CTGGAG	2 cut(s)	1248, 2327
Bpu1102I	GCTNAGC	2 cut(s)	1360, 2174
Bpu14I	TTCGAA	1 cut(s)	2064
BpuEI	CTTGAG	1 cut(s)	602
BpuMI	CCSGG	1 cut(s)	567
BsaBI	GATNNNNATC	1 cut(s)	306
BsaI	GGTCTC	2 cut(s)	575, 870
BsaJI	CCNNGG	2 cut(s)	872, 1597
BsaXI	ACNNNNNCTCC	4 cut(s)	2004, 2034, 2191, 2221
Bsc4I	CCNNNNNNNGG	6 cut(s)	240, 566, 1396, 2131, 2195, 2285
Bse1I	ACTGG	3 cut(s)	103, 159, 263
Bse3DI	GCAATG	4 cut(s)	928, 1106, 1157, 1855
Bse8I	GATNNNNATC	1 cut(s)	306
BseBI	CCWGG	2 cut(s)	832, 1925
BseDI	CCNNGG	2 cut(s)	872, 1597
BseGI	GGATG	5 cut(s)	667, 808, 854, 961, 1741
BseJI	GATNNNNATC	1 cut(s)	306
BseLI	CCNNNNNNNGG	6 cut(s)	240, 566, 1396, 2131, 2195, 2285
BseMI	GCAATG	4 cut(s)	928, 1106, 1157, 1855
BseMII	CTCAG	9 cut(s)	543, 684, 857, 1303, 1374, 2082, 2165, 2349, 2465
BseNI	ACTGG	3 cut(s)	103, 159, 263
BseRI	GAGGAG	1 cut(s)	1533
BseSI	GKGCMC	1 cut(s)	1547
BseXI	GCAGC	5 cut(s)	271, 998, 1310, 2122, 2452
BseYI	CCCAGC	1 cut(s)	422
BsgI	GTGCAG	3 cut(s)	278, 546, 2318
BshFI	GGCC	4 cut(s)	248, 915, 1389, 1923
BsiHKAI	GWGCWC	2 cut(s)	2414, 2513
BsiHKCI	CYCGRG	1 cut(s)	59
BsiSI	CCGG	1 cut(s)	566
BslFI	GGGAC	4 cut(s)	49, 1651, 1816, 1887
BslI	CCNNNNNNNGG	6 cut(s)	240, 566, 1396, 2131, 2195, 2285
BsmAI	GTCTC	5 cut(s)	111, 271, 575, 870, 1407
BsmFI	GGGAC	4 cut(s)	49, 1651, 1816, 1887
BsnI	GGCC	4 cut(s)	248, 915, 1389, 1923
Bso31I	GGTCTC	2 cut(s)	575, 870
BsoBI	CYCGRG	1 cut(s)	59
Bsp119I	TTCGAA	1 cut(s)	2064
Bsp1286I	GDGCHC	3 cut(s)	1547, 2414, 2513
Bsp1720I	GCTNAGC	2 cut(s)	1360, 2174
BspACI	CCGC	1 cut(s)	1028
BspANI	GGCC	4 cut(s)	248, 915, 1389, 1923
BspCNI	CTCAG	9 cut(s)	544, 685, 856, 1302, 1373, 2083, 2166, 2348, 2464
BspHI	TCATGA	2 cut(s)	1828, 2223
BspLI	GGNNCC	5 cut(s)	558, 601, 690, 1317, 2187
BspMI	ACCTGC	1 cut(s)	161
BspPI	GGATC	6 cut(s)	551, 564, 1248, 1310, 1323, 1735
BspQI	GCTCTTC	1 cut(s)	2066
BspT104I	TTCGAA	1 cut(s)	2064
BspTI	CTTAAG	1 cut(s)	46
BspTNI	GGTCTC	2 cut(s)	575, 870
BsrDI	GCAATG	4 cut(s)	928, 1106, 1157, 1855
BsrI	ACTGG	3 cut(s)	103, 159, 263
BssECI	CCNNGG	2 cut(s)	872, 1597
BssSI	CACGAG	2 cut(s)	1980, 2149
BssT1I	CCWWGG	2 cut(s)	872, 1597
Bst2BI	CACGAG	2 cut(s)	1980, 2149
Bst2UI	CCWGG	2 cut(s)	832, 1925
Bst4CI	ACNGT	7 cut(s)	217, 511, 621, 828, 1082, 1268, 2207
Bst6I	CTCTTC	4 cut(s)	379, 1936, 2066, 2211
BstAFI	CTTAAG	1 cut(s)	46
BstBI	TTCGAA	1 cut(s)	2064
BstC8I	GCNNGC	3 cut(s)	2140, 2245, 2372
BstF5I	GGATG	5 cut(s)	667, 808, 854, 961, 1741
BstH2I	RGCGCY	1 cut(s)	2466
BstHHI	GCGC	1 cut(s)	2465
BstMAI	GTCTC	5 cut(s)	111, 271, 575, 870, 1407
BstMWI	GCNNNNNNNGC	4 cut(s)	37, 448, 1983, 2024
BstNI	CCWGG	2 cut(s)	832, 1925
BstNSI	RCATGY	6 cut(s)	202, 386, 1105, 1652, 1720, 2420
BstSCI	CCNGG	3 cut(s)	565, 830, 1923
BstSLI	GKGCMC	1 cut(s)	1547
BstV1I	GCAGC	5 cut(s)	271, 998, 1310, 2122, 2452
BstV2I	GAAGAC	3 cut(s)	1528, 2086, 2109
BstX2I	RGATCY	7 cut(s)	556, 1231, 1240, 1315, 1474, 1727, 2489
BstXI	CCANNNNNNTGG	1 cut(s)	2360
BstYI	RGATCY	7 cut(s)	556, 1231, 1240, 1315, 1474, 1727, 2489
BsuRI	GGCC	4 cut(s)	248, 915, 1389, 1923
BtgZI	GCGATG	1 cut(s)	2181
BtsCI	GGATG	5 cut(s)	667, 808, 854, 961, 1741
BtsI	GCAGTG	3 cut(s)	1185, 1410, 1578
BtsIMutI	CAGTG	5 cut(s)	507, 1185, 1410, 1446, 1578
BveI	ACCTGC	1 cut(s)	161
Cac8I	GCNNGC	3 cut(s)	2140, 2245, 2372
CaiI	CAGNNNCTG	2 cut(s)	269, 2305
CciI	TCATGA	2 cut(s)	1828, 2223
CfoI	GCGC	1 cut(s)	2465
Cfr13I	GGNCC	2 cut(s)	828, 2185
Csp6I	GTAC	6 cut(s)	205, 221, 360, 1047, 1143, 1285
CviQI	GTAC	6 cut(s)	205, 221, 360, 1047, 1143, 1285
DrdI	GACNNNNNNGTC	1 cut(s)	1102
DseDI	GACNNNNNNGTC	1 cut(s)	1102
EaeI	YGGCCR	2 cut(s)	246, 913
Eam1104I	CTCTTC	4 cut(s)	379, 1936, 2066, 2211
EarI	CTCTTC	4 cut(s)	379, 1936, 2066, 2211
Ecl136II	GAGCTC	1 cut(s)	2412
Eco130I	CCWWGG	2 cut(s)	872, 1597
Eco147I	AGGCCT	1 cut(s)	1389
Eco24I	GRGCYC	1 cut(s)	2414
Eco31I	GGTCTC	2 cut(s)	575, 870
Eco47I	GGWCC	2 cut(s)	828, 2185
Eco47III	AGCGCT	1 cut(s)	2464
Eco53kI	GAGCTC	1 cut(s)	2412
Eco57I	CTGAAG	5 cut(s)	267, 706, 1704, 2121, 2514
Eco88I	CYCGRG	1 cut(s)	59
EcoICRI	GAGCTC	1 cut(s)	2412
EcoRI	GAATTC	2 cut(s)	547, 928
EcoRII	CCWGG	2 cut(s)	830, 1923
EcoT14I	CCWWGG	2 cut(s)	872, 1597
EcoT22I	ATGCAT	2 cut(s)	610, 1198
EcoT38I	GRGCYC	1 cut(s)	2414
ErhI	CCWWGG	2 cut(s)	872, 1597
FaqI	GGGAC	4 cut(s)	49, 1651, 1816, 1887
FauNDI	CATATG	1 cut(s)	1198
FbaI	TGATCA	2 cut(s)	1120, 2145
FblI	GTMKAC	1 cut(s)	1203
Fnu4HI	GCNGC	5 cut(s)	260, 1012, 1299, 2136, 2466
FokI	GGATG	5 cut(s)	674, 815, 861, 968, 1748
FriOI	GRGCYC	1 cut(s)	2414
Fsp4HI	GCNGC	5 cut(s)	260, 1012, 1299, 2136, 2466
FspBI	CTAG	3 cut(s)	492, 1098, 1886
GlaI	GCGC	1 cut(s)	2464
GluI	GCNGC	5 cut(s)	260, 1012, 1299, 2136, 2466
GsaI	CCCAGC	1 cut(s)	426
GsuI	CTGGAG	2 cut(s)	1248, 2327
HaeII	RGCGCY	1 cut(s)	2466
HaeIII	GGCC	4 cut(s)	248, 915, 1389, 1923
HapII	CCGG	1 cut(s)	566
HhaI	GCGC	1 cut(s)	2465
Hin6I	GCGC	1 cut(s)	2463
HinP1I	GCGC	1 cut(s)	2463
HincII	GTYRAC	1 cut(s)	1204
HindII	GTYRAC	1 cut(s)	1204
HindIII	AAGCTT	1 cut(s)	1931
HpaII	CCGG	1 cut(s)	566
HphI	GGTGA	5 cut(s)	128, 152, 748, 1130, 2219
Hpy166II	GTNNAC	3 cut(s)	1204, 2041, 2326
Hpy8I	GTNNAC	3 cut(s)	1204, 2041, 2326
HpyAV	CCTTC	4 cut(s)	949, 970, 1679, 2156
HpyCH4III	ACNGT	7 cut(s)	217, 511, 621, 828, 1082, 1268, 2207
HpyF10VI	GCNNNNNNNGC	4 cut(s)	37, 448, 1983, 2024
HspAI	GCGC	1 cut(s)	2463
Ksp22I	TGATCA	2 cut(s)	1120, 2145
LguI	GCTCTTC	1 cut(s)	2066
LmnI	GCTCC	2 cut(s)	80, 653
Lsp1109I	GCAGC	5 cut(s)	271, 998, 1310, 2122, 2452
LweI	GCATC	5 cut(s)	595, 789, 1726, 2046, 2477
MaeI	CTAG	3 cut(s)	492, 1098, 1886
MaeIII	GTNAC	4 cut(s)	116, 1486, 2020, 2153
MfeI	CAATTG	3 cut(s)	1180, 1632, 1750
MflI	RGATCY	7 cut(s)	556, 1231, 1240, 1315, 1474, 1727, 2489
MhlI	GDGCHC	3 cut(s)	1547, 2414, 2513
MlsI	TGGCCA	1 cut(s)	248
MluNI	TGGCCA	1 cut(s)	248
MlyI	GAGTC	6 cut(s)	14, 71, 335, 1018, 1965, 2402
MmeI	TCCRAC	3 cut(s)	1669, 1918, 2377
Mox20I	TGGCCA	1 cut(s)	248
Mph1103I	ATGCAT	2 cut(s)	610, 1198
MroXI	GAANNNNTTC	2 cut(s)	1610, 1878
MscI	TGGCCA	1 cut(s)	248
MseI	TTAA	6 cut(s)	47, 321, 705, 732, 819, 1311
MslI	CAYNNNNRTG	3 cut(s)	197, 1571, 1999
Msp20I	TGGCCA	1 cut(s)	248
MspA1I	CMGCKG	4 cut(s)	137, 470, 1030, 1364
MspCI	CTTAAG	1 cut(s)	46
MspI	CCGG	1 cut(s)	566
MspR9I	CCNGG	3 cut(s)	567, 832, 1925
MunI	CAATTG	3 cut(s)	1180, 1632, 1750
MvaI	CCWGG	2 cut(s)	832, 1925
MwoI	GCNNNNNNNGC	4 cut(s)	37, 448, 1983, 2024
NciI	CCSGG	1 cut(s)	567
NdeI	CATATG	1 cut(s)	1198
NlaIV	GGNNCC	5 cut(s)	558, 601, 690, 1317, 2187
NmeAIII	GCCGAG	1 cut(s)	1979
NmuCI	GTSAC	2 cut(s)	116, 2020
NsiI	ATGCAT	2 cut(s)	610, 1198
NspI	RCATGY	6 cut(s)	202, 386, 1105, 1652, 1720, 2420
NspV	TTCGAA	1 cut(s)	2064
OliI	CACNNNNGTG	1 cut(s)	1999
PaeR7I	CTCGAG	1 cut(s)	59
PagI	TCATGA	2 cut(s)	1828, 2223
PceI	AGGCCT	1 cut(s)	1389
PciI	ACATGT	2 cut(s)	382, 1648
PciSI	GCTCTTC	1 cut(s)	2066
PcsI	WCGNNNNNNNCGW	1 cut(s)	2163
PdmI	GAANNNNTTC	2 cut(s)	1610, 1878
PfeI	GAWTC	7 cut(s)	431, 670, 792, 1157, 1556, 2118, 2302
PflMI	CCANNNNNTGG	1 cut(s)	240
PkrI	GCNGC	5 cut(s)	261, 1013, 1300, 2137, 2467
PleI	GAGTC	6 cut(s)	13, 70, 334, 1018, 1964, 2401
PpsI	GAGTC	6 cut(s)	13, 70, 334, 1018, 1964, 2401
PscI	ACATGT	2 cut(s)	382, 1648
Psp124BI	GAGCTC	1 cut(s)	2414
Psp6I	CCWGG	2 cut(s)	830, 1923
PspFI	CCCAGC	1 cut(s)	422
PspGI	CCWGG	2 cut(s)	830, 1923
PspN4I	GGNNCC	5 cut(s)	558, 601, 690, 1317, 2187
PspPI	GGNCC	2 cut(s)	828, 2185
PspXI	VCTCGAGB	1 cut(s)	59
PstNI	CAGNNNCTG	2 cut(s)	269, 2305
PsuI	RGATCY	7 cut(s)	556, 1231, 1240, 1315, 1474, 1727, 2489
PvuII	CAGCTG	3 cut(s)	137, 470, 1364
RsaI	GTAC	6 cut(s)	206, 222, 361, 1048, 1144, 1286
RsaNI	GTAC	6 cut(s)	205, 221, 360, 1047, 1143, 1285
RseI	CAYNNNNRTG	3 cut(s)	197, 1571, 1999
SacI	GAGCTC	1 cut(s)	2414
SalI	GTCGAC	1 cut(s)	1202
SapI	GCTCTTC	1 cut(s)	2066
SaqAI	TTAA	6 cut(s)	47, 321, 705, 732, 819, 1311
SatI	GCNGC	5 cut(s)	260, 1012, 1299, 2136, 2466
Sau96I	GGNCC	2 cut(s)	828, 2185
ScaI	AGTACT	1 cut(s)	1144
SchI	GAGTC	6 cut(s)	14, 71, 335, 1018, 1965, 2402
ScrFI	CCNGG	3 cut(s)	567, 832, 1925
SduI	GDGCHC	3 cut(s)	1547, 2414, 2513
SfaNI	GCATC	5 cut(s)	595, 789, 1726, 2046, 2477
Sfr274I	CTCGAG	1 cut(s)	59
SfuI	TTCGAA	1 cut(s)	2064
SinI	GGWCC	2 cut(s)	828, 2185
SlaI	CTCGAG	1 cut(s)	59
SmiMI	CAYNNNNRTG	3 cut(s)	197, 1571, 1999
SmlI	CTYRAG	3 cut(s)	46, 59, 581
SmoI	CTYRAG	3 cut(s)	46, 59, 581
SseBI	AGGCCT	1 cut(s)	1389
SsiI	CCGC	1 cut(s)	1028
SspMI	CTAG	3 cut(s)	492, 1098, 1886
SstI	GAGCTC	1 cut(s)	2414
StuI	AGGCCT	1 cut(s)	1389
StyD4I	CCNGG	3 cut(s)	565, 830, 1923
StyI	CCWWGG	2 cut(s)	872, 1597
TaaI	ACNGT	7 cut(s)	217, 511, 621, 828, 1082, 1268, 2207
TaqI	TCGA	7 cut(s)	60, 790, 974, 1087, 1203, 1584, 2064
TatI	WGTACW	1 cut(s)	1142
TfiI	GAWTC	7 cut(s)	431, 670, 792, 1157, 1556, 2118, 2302
Tru1I	TTAA	6 cut(s)	47, 321, 705, 732, 819, 1311
Tru9I	TTAA	6 cut(s)	47, 321, 705, 732, 819, 1311
TscAI	CASTG	5 cut(s)	514, 1192, 1410, 1446, 1578
TseFI	GTSAC	2 cut(s)	116, 2020
TseI	GCWGC	5 cut(s)	259, 1011, 1298, 2135, 2465
Tsp45I	GTSAC	2 cut(s)	116, 2020
TspDTI	ATGAA	9 cut(s)	423, 528, 604, 678, 784, 1440, 1548, 1817, 2436
TspGWI	ACGGA	2 cut(s)	1036, 2064
TspRI	CASTG	5 cut(s)	514, 1192, 1410, 1446, 1578
Van91I	CCANNNNNTGG	1 cut(s)	240
Vha464I	CTTAAG	1 cut(s)	46
VpaK11BI	GGWCC	2 cut(s)	828, 2185
XapI	RAATTY	5 cut(s)	23, 146, 294, 547, 928
XceI	RCATGY	6 cut(s)	202, 386, 1105, 1652, 1720, 2420
XcmI	CCANNNNNNNNNTGG	4 cut(s)	74, 110, 241, 474
XhoI	CTCGAG	1 cut(s)	59
XmiI	GTMKAC	1 cut(s)	1203
XmnI	GAANNNNTTC	2 cut(s)	1610, 1878
XspI	CTAG	3 cut(s)	492, 1098, 1886
ZrmI	AGTACT	1 cut(s)	1144
Zsp2I	ATGCAT	2 cut(s)	610, 1198

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.