Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006169

Physical Location & Seq

Genomic Coordinates Reverse (-)

61636490 .. 61644143

Gene Structure 7654 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0486900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGAAGACTATGTTGAAGACGCTAATGGCTTTGCTCACGGTTCCGAGGAGGTGGAGGAGCTCACGGTTCCCAGAGGTGGGCCCCTCTACGTTGAGAATCTGACCGGTCCTCTCACCAGTGTCGGTCTCTTCCAGTCTTCTGTTCTCCAAGAGCTTCAGGATTTGGAGGTGGAATTGGCTTCGGGTTCCTCCCAAGTCTGCGACGAAGAAGATATCTCGGTGGATGAGCTTAAGATCATGAGTGAGGAGGAGTTGGTGGATATGGCTATTAAGGAAGTACTTAAGGACGATGAATGTGTTCCCAAATCTTCACCTGTTTCAGAAGAGCCCTCCGATGAAGGGATAGCAGAACATCCTGAGACACCAAATGGTAAAATCTGTTATACGAAGTCAAGAAAAAGAAAAGGAATGAAGGATGATGAAGATCCTTCCGAACTTCCATCTATTCCAGAGGAACCCCCTTCTGAAAGGAGAGGAGACAATCCTGAGACATCAAATGAAAAATATTATATAACGTATTCAAGGAGAAGAAGAAGAATATTGAAGGACGACGAAGGTGCTCTAAATGTTTTGCCGATTTCAGAAAAGCCTCTCAAGGAAAGGAGACCAGATGATCCTCATAAATCAGAACTTAGATCATGCAAAGGAAAAGAAGTGAAGACAAATTATCTTGCTATTAAGGATGATGAAGATGCCCCCAATCTTTTGTCTATTCCGGAAGAGCCCTTTAATGAAAGGAGAGCAGATGATCCTGACACGTCAAATCATAAAATTTGTGTAAGGAAATCAAGGAAGAGAAAAGTTATGAAGGCAAATAGTCATTCTCTTGAGAGAAATGATAAGGAGAAGAAGGCTTTTTGGTCACAAATTGCAAAGAAGGTTGAGTATATTAAAAAAATCAAAGAAAAGCAGGATGAGGATAAAGCAGCTGTGACACTACATTCATTCAACCGTAGTTTGAAAATCAAGGGTCGTGCCAGTGCATCCTCAGGGACAGCTGAAAGGATGAAACCCCTCAGATCTGCAAGTGCAGCAGTGAAGGTAAAATTATCCAGCATTCAGGGTTGCATACCTGTACGCCATCCAGAAGTTGCTCTTTCAATTGAGGTTTATCATAATGTCCGAAACTGGGTCAAGACCCAAGAATTCTTGGTCCTAGGACAACAAACCTTGACTGAGTTGAGGGATAAGATATATTGTTTAACAGACAAGGTGATGGAAACAGATGGCCAGCATAATCATTCAGGATATTTCCTCATAGAAGATACATTCTTCAACGATCTGAGGGATCCGTCTGCAATAGATTATAGTGAATCAATCTTTGATTGGCTTAGAAATTCAAAAGATGATGCTTTAAAAAAATGGGAGTGTATTTTAGCTGGAAAAATGCAAAAGCACAAAAAAGCAGTTGTAGGCGACATAACTGGCTCAAAATTGCCTCGCTTCCAAGCTGCTGATATGCACAAGACACAGTTTTGCAACTTGAAATTTCAACTTGGTGCTGGATATCTATACTGTCACCAGGGTGACTGCAGACACACAGTTGTGATTAGAGACATGCGGATGCTTCATCCAGAGGATATACAAAACAGGGCAGCTTATCCAATACTCTTATTCCAGTTGAAGTTACATGTACAGAAATGTAGAGTGTGTAGGATATATAGAGCTACAAAGATGACTGTCAATGACAAATGGACTCCAGAGAATCCCTGCTACTTTTGCGATAATTGCTACTTCCTTCTTCACTATACGAAAGATGGTTCTCTTCAGTATCAGGACTTCGAAGTGCATGATTATCACCATGATCAACCGCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

605

Amino Acids

69.53

Weight (kDa)

6.04

Isoelectric Point (pI)

49.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SNAPC3	PF12251	381 - 599	8.4e-69	snRNA-activating protein complex (SNAPc), subunit 3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19130
fragaria_vesca	FvH4_6g44310
malus_domestica	MD09G1098900.v1.1 MD17G1087200.v1.1
prunus_persica	Prupe.3G227300_v2.0.a1 Prupe.3G227500_v2.0.a1
pyrus_communis	pycom09g02260 pycom17g08440
rosa_chinensis	RchiOBHm_Chr2g0161171 RchiOBHm_Chr2g0161191
rosa_laevigata	RLG00000021264 RLG00000021266 RLG00000029382
rosa_multiflora	Rmu_sc0006420.1_g000040 Rmu_sc0006420.1_g000045
rosa_roxburghii	Rroxscaffold_2G00089040 Rroxscaffold_2G00089060
rosa_rugosa	Rorug02G0486800 Rorug02G0486900
rosa_samantha	Rh2AG553500 Rh2BG567200 Rh2CG537300 Rh2CG537500 Rh2DG576500 Rh2DG576600
rosa_wichuraiana	Rw2G045780 Rw2G045800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	1813
AccIII	TCCGGA	1 cut(s)	715
AciI	CCGC	2 cut(s)	1561, 1811
AclWI	GGATC	5 cut(s)	419, 608, 743, 1283, 1296
AcoI	YGGCCR	1 cut(s)	1228
AcsI	RAATTY	4 cut(s)	771, 1145, 1336, 1487
AcuI	CTGAAG	2 cut(s)	140, 1751
AfaI	GTAC	3 cut(s)	279, 1077, 1635
AfiI	CCNNNNNNNGG	4 cut(s)	77, 78, 339, 1129
AflII	CTTAAG	2 cut(s)	230, 281
AflIII	ACRYGT	2 cut(s)	756, 1630
AgeI	ACCGGT	1 cut(s)	104
AjiI	CACGTC	1 cut(s)	759
AjnI	CCWGG	1 cut(s)	1521
AleI	CACNNNNGTG	2 cut(s)	1524, 1544
AluBI	AGCT	9 cut(s)	61, 154, 229, 929, 998, 1379, 1451, 1598, 1667
AluI	AGCT	9 cut(s)	61, 154, 229, 929, 998, 1379, 1451, 1598, 1667
Alw21I	GWGCWC	2 cut(s)	63, 562
Alw26I	GTCTC	6 cut(s)	131, 353, 471, 482, 598, 1548
AlwI	GGATC	5 cut(s)	419, 608, 743, 1283, 1296
Aor13HI	TCCGGA	1 cut(s)	715
AoxI	GGCC	2 cut(s)	80, 1228
ApaI	GGGCCC	1 cut(s)	84
ApeKI	GCWGC	4 cut(s)	926, 1031, 1451, 1595
ApoI	RAATTY	4 cut(s)	771, 1145, 1336, 1487
AsiGI	ACCGGT	1 cut(s)	104
Asp700I	GAANNNNTTC	1 cut(s)	297
AspA2I	CCTAGG	1 cut(s)	1156
AspS9I	GGNCC	4 cut(s)	80, 81, 107, 1153
AsuHPI	GGTGA	6 cut(s)	106, 303, 1225, 1511, 1538, 1790
AsuII	TTCGAA	1 cut(s)	1782
AvaII	GGWCC	2 cut(s)	107, 1153
AvrII	CCTAGG	1 cut(s)	1156
AxyI	CCTNAGG	1 cut(s)	988
BaeGI	GKGCMC	1 cut(s)	84
BalI	TGGCCA	1 cut(s)	1230
BamHI	GGATCC	1 cut(s)	1288
BanII	GRGCYC	4 cut(s)	63, 84, 330, 726
BarI	GAAGNNNNNNTAC	2 cut(s)	1763, 1795
BbsI	GAAGAC	4 cut(s)	12, 24, 129, 665
Bbv12I	GWGCWC	2 cut(s)	63, 562
BbvI	GCAGC	4 cut(s)	938, 1043, 1438, 1607
BccI	CCATC	5 cut(s)	448, 1089, 1210, 1220, 1751
BcgI	CGANNNNNNTGC	2 cut(s)	539, 573
BciT130I	CCWGG	1 cut(s)	1523
BclI	TGATCA	1 cut(s)	1804
BcoDI	GTCTC	6 cut(s)	131, 353, 471, 482, 598, 1548
BfaI	CTAG	1 cut(s)	1157
BfmI	CTRYAG	1 cut(s)	1531
BfrI	CTTAAG	2 cut(s)	230, 281
BglII	AGATCT	1 cut(s)	1019
BisI	GCNGC	4 cut(s)	927, 1032, 1452, 1596
BlnI	CCTAGG	1 cut(s)	1156
BlsI	GCNGC	4 cut(s)	928, 1033, 1453, 1597
BmcAI	AGTACT	1 cut(s)	279
Bme1390I	CCNGG	1 cut(s)	1523
Bme18I	GGWCC	2 cut(s)	107, 1153
BmgBI	CACGTC	1 cut(s)	759
BmgT120I	GGNCC	4 cut(s)	80, 81, 107, 1153
BmiI	GGNNCC	7 cut(s)	43, 69, 82, 83, 187, 456, 1290
BmrFI	CCNGG	1 cut(s)	1523
BmrI	ACTGGG	1 cut(s)	1138
BmsI	GCATC	4 cut(s)	682, 992, 1339, 1554
BmuI	ACTGGG	1 cut(s)	1138
BpiI	GAAGAC	4 cut(s)	12, 24, 129, 665
BpmI	CTGGAG	1 cut(s)	1683
Bpu14I	TTCGAA	1 cut(s)	1782
BpuEI	CTTGAG	2 cut(s)	578, 848
BsaBI	GATNNNNATC	1 cut(s)	423
BsaI	GGTCTC	2 cut(s)	131, 598
BsaJI	CCNNGG	3 cut(s)	45, 1156, 1522
BsaWI	WCCGGW	2 cut(s)	104, 715
Bsc4I	CCNNNNNNNGG	4 cut(s)	77, 78, 339, 1129
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	6 cut(s)	117, 133, 978, 1133, 1429, 1618
Bse21I	CCTNAGG	1 cut(s)	988
Bse8I	GATNNNNATC	1 cut(s)	423
BseAI	TCCGGA	1 cut(s)	715
BseBI	CCWGG	1 cut(s)	1523
BseDI	CCNNGG	3 cut(s)	45, 1156, 1522
BseJI	GATNNNNATC	1 cut(s)	423
BseLI	CCNNNNNNNGG	4 cut(s)	77, 78, 339, 1129
BseMII	CTCAG	6 cut(s)	348, 477, 1002, 1030, 1167, 1274
BseNI	ACTGG	6 cut(s)	117, 133, 978, 1133, 1429, 1618
BseRI	GAGGAG	5 cut(s)	62, 71, 260, 263, 489
BseSI	GKGCMC	1 cut(s)	84
BseXI	GCAGC	4 cut(s)	938, 1043, 1438, 1607
BsgI	GTGCAG	1 cut(s)	1050
Bsh1236I	CGCG	1 cut(s)	1813
BshFI	GGCC	2 cut(s)	82, 1230
BshTI	ACCGGT	1 cut(s)	104
BsiHKAI	GWGCWC	2 cut(s)	63, 562
BsiSI	CCGG	2 cut(s)	105, 716
BslFI	GGGAC	1 cut(s)	1006
BslI	CCNNNNNNNGG	4 cut(s)	77, 78, 339, 1129
BsmAI	GTCTC	6 cut(s)	131, 353, 471, 482, 598, 1548
BsmFI	GGGAC	1 cut(s)	1006
BsmI	GAATGC	1 cut(s)	1056
BsnI	GGCC	2 cut(s)	82, 1230
Bso31I	GGTCTC	2 cut(s)	131, 598
Bsp119I	TTCGAA	1 cut(s)	1782
Bsp120I	GGGCCC	1 cut(s)	80
Bsp1286I	GDGCHC	5 cut(s)	63, 84, 330, 562, 726
Bsp13I	TCCGGA	1 cut(s)	715
Bsp1407I	TGTACA	1 cut(s)	1633
Bsp143I	GATC	9 cut(s)	234, 424, 613, 635, 748, 1019, 1279, 1288, 1804
BspACI	CCGC	2 cut(s)	1561, 1811
BspANI	GGCC	2 cut(s)	82, 1230
BspCNI	CTCAG	6 cut(s)	349, 478, 1001, 1029, 1168, 1275
BspEI	TCCGGA	1 cut(s)	715
BspFNI	CGCG	1 cut(s)	1813
BspHI	TCATGA	1 cut(s)	237
BspLI	GGNNCC	7 cut(s)	43, 69, 82, 83, 187, 456, 1290
BspMAI	CTGCAG	1 cut(s)	1535
BspPI	GGATC	5 cut(s)	419, 608, 743, 1283, 1296
BspQI	GCTCTTC	2 cut(s)	318, 714
BspT104I	TTCGAA	1 cut(s)	1782
BspTI	CTTAAG	2 cut(s)	230, 281
BspTNI	GGTCTC	2 cut(s)	131, 598
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	1 cut(s)	1633
BsrI	ACTGG	6 cut(s)	117, 133, 978, 1133, 1429, 1618
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	3 cut(s)	45, 1156, 1522
BssMI	GATC	9 cut(s)	234, 424, 613, 635, 748, 1019, 1279, 1288, 1804
BssT1I	CCWWGG	1 cut(s)	1156
Bst2UI	CCWGG	1 cut(s)	1523
Bst4CI	ACNGT	7 cut(s)	41, 67, 953, 1473, 1517, 1543, 1681
Bst6I	CTCTTC	5 cut(s)	134, 318, 714, 788, 1770
BstAFI	CTTAAG	2 cut(s)	230, 281
BstAUI	TGTACA	1 cut(s)	1633
BstBI	TTCGAA	1 cut(s)	1782
BstC8I	GCNNGC	1 cut(s)	1232
BstDEI	CTNAG	8 cut(s)	357, 486, 632, 988, 1016, 1176, 1283, 1331
BstFNI	CGCG	1 cut(s)	1813
BstKTI	GATC	9 cut(s)	237, 427, 616, 638, 751, 1022, 1282, 1291, 1807
BstMAI	GTCTC	6 cut(s)	131, 353, 471, 482, 598, 1548
BstMBI	GATC	9 cut(s)	234, 424, 613, 635, 748, 1019, 1279, 1288, 1804
BstMWI	GCNNNNNNNGC	3 cut(s)	1031, 1719, 1728
BstNI	CCWGG	1 cut(s)	1523
BstNSI	RCATGY	2 cut(s)	1561, 1634
BstSCI	CCNGG	1 cut(s)	1521
BstSFI	CTRYAG	1 cut(s)	1531
BstSLI	GKGCMC	1 cut(s)	84
BstUI	CGCG	1 cut(s)	1813
BstV1I	GCAGC	4 cut(s)	938, 1043, 1438, 1607
BstV2I	GAAGAC	4 cut(s)	12, 24, 129, 665
BstX2I	RGATCY	3 cut(s)	424, 1019, 1288
BstYI	RGATCY	3 cut(s)	424, 1019, 1288
Bsu36I	CCTNAGG	1 cut(s)	988
BsuRI	GGCC	2 cut(s)	82, 1230
BtrI	CACGTC	1 cut(s)	759
BtsI	GCAGTG	1 cut(s)	1041
BtsIMutI	CAGTG	3 cut(s)	124, 985, 1041
Cac8I	GCNNGC	1 cut(s)	1232
CciI	TCATGA	1 cut(s)	237
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	4 cut(s)	80, 81, 107, 1153
CseI	GACGC	1 cut(s)	29
Csp6I	GTAC	3 cut(s)	278, 1076, 1634
CspAI	ACCGGT	1 cut(s)	104
CviAII	CATG	6 cut(s)	238, 639, 1558, 1631, 1790, 1802
CviQI	GTAC	3 cut(s)	278, 1076, 1634
DdeI	CTNAG	8 cut(s)	357, 486, 632, 988, 1016, 1176, 1283, 1331
DpnI	GATC	9 cut(s)	236, 426, 615, 637, 750, 1021, 1281, 1290, 1806
DpnII	GATC	9 cut(s)	234, 424, 613, 635, 748, 1019, 1279, 1288, 1804
DraI	TTTAAA	1 cut(s)	1356
EaeI	YGGCCR	1 cut(s)	1228
Eam1104I	CTCTTC	5 cut(s)	134, 318, 714, 788, 1770
EarI	CTCTTC	5 cut(s)	134, 318, 714, 788, 1770
Ecl136II	GAGCTC	1 cut(s)	61
Eco130I	CCWWGG	1 cut(s)	1156
Eco24I	GRGCYC	4 cut(s)	63, 84, 330, 726
Eco31I	GGTCTC	2 cut(s)	131, 598
Eco32I	GATATC	2 cut(s)	214, 1508
Eco47I	GGWCC	2 cut(s)	107, 1153
Eco53kI	GAGCTC	1 cut(s)	61
Eco57I	CTGAAG	2 cut(s)	140, 1751
Eco81I	CCTNAGG	1 cut(s)	988
EcoICRI	GAGCTC	1 cut(s)	61
EcoO109I	RGGNCCY	1 cut(s)	81
EcoRI	GAATTC	1 cut(s)	1145
EcoRII	CCWGG	1 cut(s)	1521
EcoRV	GATATC	2 cut(s)	214, 1508
EcoT14I	CCWWGG	1 cut(s)	1156
EcoT38I	GRGCYC	4 cut(s)	63, 84, 330, 726
ErhI	CCWWGG	1 cut(s)	1156
FaeI	CATG	6 cut(s)	241, 642, 1561, 1634, 1793, 1805
FalI	AAGNNNNNCTT	2 cut(s)	1080, 1112
FaqI	GGGAC	1 cut(s)	1006
FatI	CATG	6 cut(s)	237, 638, 1557, 1630, 1789, 1801
FbaI	TGATCA	1 cut(s)	1804
Fnu4HI	GCNGC	4 cut(s)	927, 1032, 1452, 1596
FriOI	GRGCYC	4 cut(s)	63, 84, 330, 726
Fsp4HI	GCNGC	4 cut(s)	927, 1032, 1452, 1596
FspBI	CTAG	1 cut(s)	1157
GluI	GCNGC	4 cut(s)	927, 1032, 1452, 1596
GsuI	CTGGAG	1 cut(s)	1683
HaeIII	GGCC	2 cut(s)	82, 1230
HapII	CCGG	2 cut(s)	105, 716
HgaI	GACGC	1 cut(s)	29
Hin1II	CATG	6 cut(s)	241, 642, 1561, 1634, 1793, 1805
HinfI	GANTC	4 cut(s)	97, 1313, 1696, 1705
HpaII	CCGG	2 cut(s)	105, 716
HphI	GGTGA	6 cut(s)	106, 303, 1225, 1511, 1538, 1790
Hpy99I	CGWCG	2 cut(s)	206, 554
HpyCH4III	ACNGT	7 cut(s)	41, 67, 953, 1473, 1517, 1543, 1681
HpyCH4IV	ACGT	3 cut(s)	90, 515, 758
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1031, 1719, 1728
HpyF3I	CTNAG	8 cut(s)	357, 486, 632, 988, 1016, 1176, 1283, 1331
HpySE526I	ACGT	3 cut(s)	90, 515, 758
Hsp92II	CATG	6 cut(s)	241, 642, 1561, 1634, 1793, 1805
Kpn2I	TCCGGA	1 cut(s)	715
Ksp22I	TGATCA	1 cut(s)	1804
Kzo9I	GATC	9 cut(s)	234, 424, 613, 635, 748, 1019, 1279, 1288, 1804
LguI	GCTCTTC	2 cut(s)	318, 714
LmnI	GCTCC	1 cut(s)	58
Lsp1109I	GCAGC	4 cut(s)	938, 1043, 1438, 1607
LweI	GCATC	4 cut(s)	682, 992, 1339, 1554
MaeI	CTAG	1 cut(s)	1157
MaeII	ACGT	3 cut(s)	90, 515, 758
MaeIII	GTNAC	5 cut(s)	861, 931, 1517, 1526, 1626
MalI	GATC	9 cut(s)	236, 426, 615, 637, 750, 1021, 1281, 1290, 1806
MboI	GATC	9 cut(s)	234, 424, 613, 635, 748, 1019, 1279, 1288, 1804
MfeI	CAATTG	1 cut(s)	1101
MflI	RGATCY	3 cut(s)	424, 1019, 1288
MhlI	GDGCHC	5 cut(s)	63, 84, 330, 562, 726
MlsI	TGGCCA	1 cut(s)	1230
MluNI	TGGCCA	1 cut(s)	1230
MlyI	GAGTC	1 cut(s)	1690
Mox20I	TGGCCA	1 cut(s)	1230
MroI	TCCGGA	1 cut(s)	715
MroXI	GAANNNNTTC	1 cut(s)	297
MscI	TGGCCA	1 cut(s)	1230
MseI	TTAA	8 cut(s)	231, 270, 282, 678, 729, 891, 1202, 1355
MslI	CAYNNNNRTG	3 cut(s)	1524, 1544, 1562
Msp20I	TGGCCA	1 cut(s)	1230
MspA1I	CMGCKG	2 cut(s)	929, 998
MspCI	CTTAAG	2 cut(s)	230, 281
MspI	CCGG	2 cut(s)	105, 716
MspR9I	CCNGG	1 cut(s)	1523
MunI	CAATTG	1 cut(s)	1101
Mva1269I	GAATGC	1 cut(s)	1056
MvaI	CCWGG	1 cut(s)	1523
MvnI	CGCG	1 cut(s)	1813
MwoI	GCNNNNNNNGC	3 cut(s)	1031, 1719, 1728
NdeII	GATC	9 cut(s)	234, 424, 613, 635, 748, 1019, 1279, 1288, 1804
NlaIII	CATG	6 cut(s)	241, 642, 1561, 1634, 1793, 1805
NlaIV	GGNNCC	7 cut(s)	43, 69, 82, 83, 187, 456, 1290
NmuCI	GTSAC	4 cut(s)	861, 931, 1517, 1526
NspI	RCATGY	2 cut(s)	1561, 1634
NspV	TTCGAA	1 cut(s)	1782
OliI	CACNNNNGTG	2 cut(s)	1524, 1544
PagI	TCATGA	1 cut(s)	237
PciI	ACATGT	1 cut(s)	1630
PciSI	GCTCTTC	2 cut(s)	318, 714
PctI	GAATGC	1 cut(s)	1056
PdmI	GAANNNNTTC	1 cut(s)	297
PfeI	GAWTC	3 cut(s)	97, 1313, 1705
PinAI	ACCGGT	1 cut(s)	104
PkrI	GCNGC	4 cut(s)	928, 1033, 1453, 1597
PleI	GAGTC	1 cut(s)	1690
PpsI	GAGTC	1 cut(s)	1690
PscI	ACATGT	1 cut(s)	1630
Psp124BI	GAGCTC	1 cut(s)	63
Psp6I	CCWGG	1 cut(s)	1521
PspGI	CCWGG	1 cut(s)	1521
PspN4I	GGNNCC	7 cut(s)	43, 69, 82, 83, 187, 456, 1290
PspOMI	GGGCCC	1 cut(s)	80
PspPI	GGNCC	4 cut(s)	80, 81, 107, 1153
PstI	CTGCAG	1 cut(s)	1535
PsuI	RGATCY	3 cut(s)	424, 1019, 1288
PvuII	CAGCTG	2 cut(s)	929, 998
RsaI	GTAC	3 cut(s)	279, 1077, 1635
RsaNI	GTAC	3 cut(s)	278, 1076, 1634
RseI	CAYNNNNRTG	3 cut(s)	1524, 1544, 1562
SacI	GAGCTC	1 cut(s)	63
SapI	GCTCTTC	2 cut(s)	318, 714
SaqAI	TTAA	8 cut(s)	231, 270, 282, 678, 729, 891, 1202, 1355
SatI	GCNGC	4 cut(s)	927, 1032, 1452, 1596
Sau3AI	GATC	9 cut(s)	234, 424, 613, 635, 748, 1019, 1279, 1288, 1804
Sau96I	GGNCC	4 cut(s)	80, 81, 107, 1153
ScaI	AGTACT	1 cut(s)	279
SchI	GAGTC	1 cut(s)	1690
ScrFI	CCNGG	1 cut(s)	1523
SduI	GDGCHC	5 cut(s)	63, 84, 330, 562, 726
SfaNI	GCATC	4 cut(s)	682, 992, 1339, 1554
SfcI	CTRYAG	1 cut(s)	1531
SfuI	TTCGAA	1 cut(s)	1782
SinI	GGWCC	2 cut(s)	107, 1153
SmiMI	CAYNNNNRTG	3 cut(s)	1524, 1544, 1562
SmlI	CTYRAG	4 cut(s)	230, 281, 593, 827
SmoI	CTYRAG	4 cut(s)	230, 281, 593, 827
SsiI	CCGC	2 cut(s)	1561, 1811
SspI	AATATT	2 cut(s)	506, 540
SspMI	CTAG	1 cut(s)	1157
SstI	GAGCTC	1 cut(s)	63
StyD4I	CCNGG	1 cut(s)	1521
StyI	CCWWGG	1 cut(s)	1156
TaaI	ACNGT	7 cut(s)	41, 67, 953, 1473, 1517, 1543, 1681
TaiI	ACGT	3 cut(s)	93, 518, 761
TaqI	TCGA	1 cut(s)	1782
TaqII	GACCGA	1 cut(s)	113
TatI	WGTACW	2 cut(s)	277, 1633
TfiI	GAWTC	3 cut(s)	97, 1313, 1705
Tru1I	TTAA	8 cut(s)	231, 270, 282, 678, 729, 891, 1202, 1355
Tru9I	TTAA	8 cut(s)	231, 270, 282, 678, 729, 891, 1202, 1355
TscAI	CASTG	3 cut(s)	124, 985, 1041
TseFI	GTSAC	4 cut(s)	861, 931, 1517, 1526
TseI	GCWGC	4 cut(s)	926, 1031, 1451, 1595
Tsp45I	GTSAC	4 cut(s)	861, 931, 1517, 1526
TspGWI	ACGGA	1 cut(s)	1281
TspRI	CASTG	3 cut(s)	124, 985, 1041
Vha464I	CTTAAG	2 cut(s)	230, 281
VpaK11BI	GGWCC	2 cut(s)	107, 1153
XapI	RAATTY	4 cut(s)	771, 1145, 1336, 1487
XceI	RCATGY	2 cut(s)	1561, 1634
XmaJI	CCTAGG	1 cut(s)	1156
XmnI	GAANNNNTTC	1 cut(s)	297
XspI	CTAG	1 cut(s)	1157
ZrmI	AGTACT	1 cut(s)	279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.