Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0006169

Physical Location & Seq

Genomic Coordinates Forward (+)

78398858 .. 78401311

Gene Structure 2454 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG553500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGAGTCCAAAACAAACCCAAAATTCTTGCTTTCCTTGCTTTTCTTAAGCCTATGCCTCAAGTCCCATATCTGCTTTGGAGCTGACACCATCACAGCAAACCAGTCTCTCTCTGGTGACCAAACCATTGTTTCAGCTCGTGGGAAATTTGAGCTGGGTTTCTTCAAGGCAGGTAATACTTCAAACTACTACATAGGCATGTGGTACTACAAGACAATAGTAACAGAGCAAACCATAGTCTGGGTGGCCAATAGGGAGCAGCCAGTCTCTGATAGATTTTCTTCAGAGTTGAGAATCTCAGATGGTAATCTGGTGCTGTTTAATGAGTCCAAAACCCCAGTTTGGTCCACAGATGTCAGTTCAAGTTCAGCCTCTTCTACACGTGTAGTTCTTTTAGATAATGGAAACCTTGTGCTAAGAGCTGGGTCTAATTTATCTTTGCCTTTATGGCAAAGTTTTGATTATCCAGCTGATACTTGGCTACCAGAAGCTAGAATTGGGTTCAACACTGTTACAAACCGAACCCAAGTCCTGACTTCATGGAAGAATTTTCAGGATCCTGCACCGGGTATTTACTCTCTCGTGCTTGACCCGAATGGAAGTGATGCATATTTCTCACTGTGGAATAGGTCTAAGCAGTATTGGACTAGTGGAGCTTGGGATGCAAAGAGTCATATTTTCAGTTTGGTTCCTGAGATGAGGTATAACTATATCTACAACTTCAGCTATGTTAAAAACAAAAATGAGAGCTACTTCACCTATTCTGGTTATGATCCTAGCATCACATCTCGATTCATAATGGATGTATCGGGTCAGGTTAAGCAAGAGTCCTGGTTGAAATCTCAGGGATGGAACATGTTTTGGTCTCAGCCGTGGAAACTATGTGAGGTTTATTCCTATTGTGGTGCATTTGGCAGATGCAATGAGAAGTCCTTGCCCTTCTGTAATTGTTTATATGGTTTTGAGCCGAAATTGAAGGTGGATTGGAATTCGCAGGTTTATTCTGGTGGCTGCAAAAGACGGACTGTGCTGAATTTTGCTAATGCTACTACCAATAATGGGAAGCAAGACCGGTTTCTCAAATTGCCTAGCATGTCTTTGCCTGATAGTGAAGTGTCTGTAGAGGCTGGGAGTACTGCGCAATGTGAATCAATCTGCTTAAGTAACCGCTCTTGCACTGCTTATGCTTATCATAGCAATGGATGTTCAATATGGATTGCAGATCTCTTGAATCTGCAACAACTCACAGCAGATGACGGTGATGGAAAAACTTTGTACCTCAGACTTGCAGCTTCCGAGTTTAAGGATCCAAAAGGAAGACGAAACACTGAGCCATCTGAAGACGGCAAGGTTAGATTCTTCCCAACTCGGGCTGCTGGCGTGATCACAAGTAACGAAGAAGGCGATGTGCTGAGCCTATTGGACCCGAAATTAGGGAGAAATGGTGATGTGGAAGAGATTATGAGGGTTCTTAGAGTTGCTTGCTGGTGTGTCCAAGATGATGAGGCTCATAGACCATCAATGGGTCAAGTGGTGCAGATTCTCGAGGGGGTTTTGAATGTGAACTTGCCCTCAGTTCCAAGATCTCTCCAACTCTTTGGAGATAGCCAGCACATAGTTTTCTTCACTGAGTCATCTTCAAGCCAGAGCTCACATGCACCAAGCAATTATACATCAACAGCTTCATCGATCTCAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

566

Amino Acids

63.43

Weight (kDa)

5.98

Isoelectric Point (pI)

43.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	78 - 182	2.8e-34	D-mannose binding lectin
S_locus_glycop	PF00954	215 - 324	6.6e-27	S-locus glycoprotein domain
PAN_2	PF08276	355 - 411	1.7e-14	PAN-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19130
fragaria_vesca	FvH4_6g44310
malus_domestica	MD09G1098900.v1.1 MD17G1087200.v1.1
prunus_persica	Prupe.3G227300_v2.0.a1 Prupe.3G227500_v2.0.a1
pyrus_communis	pycom09g02260 pycom17g08440
rosa_chinensis	RchiOBHm_Chr2g0161171 RchiOBHm_Chr2g0161191
rosa_laevigata	RLG00000021264 RLG00000021266 RLG00000029382
rosa_multiflora	Rmu_sc0006420.1_g000040 Rmu_sc0006420.1_g000045
rosa_roxburghii	Rroxscaffold_2G00089040 Rroxscaffold_2G00089060
rosa_rugosa	Rorug02G0486800 Rorug02G0486900
rosa_samantha	Rh2AG553500 Rh2BG567200 Rh2CG537300 Rh2CG537500 Rh2DG576500 Rh2DG576600
rosa_wichuraiana	Rw2G045780 Rw2G045800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1140
Acc36I	ACCTGC	2 cut(s)	161, 985
AccB7I	CCANNNNNTGG	1 cut(s)	240
AccBSI	CCGCTC	1 cut(s)	1170
AciI	CCGC	1 cut(s)	1168
AclWI	GGATC	5 cut(s)	551, 564, 767, 1301, 1314
AcoI	YGGCCR	1 cut(s)	246
AcsI	RAATTY	5 cut(s)	23, 146, 547, 988, 1033
AcuI	CTGAAG	3 cut(s)	267, 706, 1359
AcvI	CACGTG	1 cut(s)	383
AfaI	GTAC	3 cut(s)	206, 1135, 1277
AfiI	CCNNNNNNNGG	7 cut(s)	240, 342, 566, 1059, 1369, 1433, 1523
AflII	CTTAAG	2 cut(s)	46, 1159
AflIII	ACRYGT	3 cut(s)	380, 382, 855
AgeI	ACCGGT	1 cut(s)	1071
AhlI	ACTAGT	1 cut(s)	647
AjnI	CCWGG	1 cut(s)	830
AjuI	GAANNNNNNNTTGG	2 cut(s)	480, 512
Alw21I	GWGCWC	1 cut(s)	1652
Alw26I	GTCTC	3 cut(s)	111, 271, 870
AlwI	GGATC	5 cut(s)	551, 564, 767, 1301, 1314
AlwNI	CAGNNNCTG	1 cut(s)	269
Ama87I	CYCGRG	2 cut(s)	1368, 1544
AoxI	GGCC	1 cut(s)	246
ApeKI	GCWGC	4 cut(s)	259, 1011, 1289, 1373
ApoI	RAATTY	5 cut(s)	23, 146, 547, 988, 1033
AsiGI	ACCGGT	1 cut(s)	1071
AspLEI	GCGC	1 cut(s)	1141
AspS9I	GGNCC	2 cut(s)	345, 1423
AsuC2I	CCSGG	1 cut(s)	567
AsuHPI	GGTGA	4 cut(s)	128, 748, 1271, 1457
AvaI	CYCGRG	2 cut(s)	1368, 1544
AvaII	GGWCC	2 cut(s)	345, 1423
BalI	TGGCCA	1 cut(s)	248
BamHI	GGATCC	2 cut(s)	556, 1306
BanII	GRGCYC	1 cut(s)	1652
BauI	CACGAG	2 cut(s)	138, 581
BbrPI	CACGTG	1 cut(s)	383
BbsI	GAAGAC	2 cut(s)	1324, 1347
Bbv12I	GWGCWC	1 cut(s)	1652
BbvI	GCAGC	4 cut(s)	271, 998, 1301, 1360
BccI	CCATC	6 cut(s)	98, 296, 843, 1256, 1342, 1525
BceAI	ACGGC	2 cut(s)	856, 1360
BciT130I	CCWGG	1 cut(s)	832
BclI	TGATCA	1 cut(s)	1383
BcnI	CCSGG	1 cut(s)	567
BcoDI	GTCTC	3 cut(s)	111, 271, 870
BcuI	ACTAGT	1 cut(s)	647
BfaI	CTAG	4 cut(s)	492, 648, 777, 1089
BfmI	CTRYAG	1 cut(s)	1119
BfrI	CTTAAG	2 cut(s)	46, 1159
BfuAI	ACCTGC	2 cut(s)	161, 985
BglI	GCCNNNNNGGC	1 cut(s)	448
BglII	AGATCT	2 cut(s)	1222, 1583
BisI	GCNGC	4 cut(s)	260, 1012, 1290, 1374
BlpI	GCTNAGC	1 cut(s)	1412
BlsI	GCNGC	4 cut(s)	261, 1013, 1291, 1375
BmcAI	AGTACT	1 cut(s)	1135
Bme1390I	CCNGG	2 cut(s)	567, 832
Bme18I	GGWCC	2 cut(s)	345, 1423
BmeT110I	CYCGRG	2 cut(s)	1368, 1544
BmgT120I	GGNCC	2 cut(s)	345, 1423
BmiI	GGNNCC	4 cut(s)	558, 690, 1308, 1425
BmrFI	CCNGG	2 cut(s)	567, 832
BmrI	ACTGGG	1 cut(s)	332
BmsI	GCATC	4 cut(s)	595, 652, 789, 908
BmuI	ACTGGG	1 cut(s)	332
BpiI	GAAGAC	2 cut(s)	1324, 1347
Bpu1102I	GCTNAGC	1 cut(s)	1412
BpuEI	CTTGAG	1 cut(s)	44
BpuMI	CCSGG	1 cut(s)	567
Bsa29I	ATCGAT	1 cut(s)	1688
BsaAI	YACGTR	1 cut(s)	383
BsaBI	GATNNNNATC	1 cut(s)	306
BsaI	GGTCTC	1 cut(s)	870
BsaJI	CCNNGG	1 cut(s)	872
BsaWI	WCCGGW	1 cut(s)	1071
BsaXI	ACNNNNNCTCC	2 cut(s)	1429, 1459
Bsc4I	CCNNNNNNNGG	7 cut(s)	240, 342, 566, 1059, 1369, 1433, 1523
Bse118I	RCCGGY	1 cut(s)	1071
Bse1I	ACTGG	3 cut(s)	103, 263, 338
Bse3DI	GCAATG	3 cut(s)	928, 1148, 1204
Bse8I	GATNNNNATC	1 cut(s)	306
BseBI	CCWGG	1 cut(s)	832
BseCI	ATCGAT	1 cut(s)	1688
BseDI	CCNNGG	1 cut(s)	872
BseGI	GGATG	4 cut(s)	667, 808, 854, 1208
BseJI	GATNNNNATC	1 cut(s)	306
BseLI	CCNNNNNNNGG	7 cut(s)	240, 342, 566, 1059, 1369, 1433, 1523
BseMI	GCAATG	3 cut(s)	928, 1148, 1204
BseMII	CTCAG	9 cut(s)	312, 684, 857, 881, 1294, 1320, 1403, 1587, 1620
BseNI	ACTGG	3 cut(s)	103, 263, 338
BseXI	GCAGC	4 cut(s)	271, 998, 1301, 1360
BseYI	CCCAGC	3 cut(s)	154, 422, 1127
BsgI	GTGCAG	2 cut(s)	546, 1556
BshFI	GGCC	1 cut(s)	248
BshTI	ACCGGT	1 cut(s)	1071
BshVI	ATCGAT	1 cut(s)	1688
BsiHKAI	GWGCWC	1 cut(s)	1652
BsiHKCI	CYCGRG	2 cut(s)	1368, 1544
BsiSI	CCGG	2 cut(s)	566, 1072
BslFI	GGGAC	1 cut(s)	49
BslI	CCNNNNNNNGG	7 cut(s)	240, 342, 566, 1059, 1369, 1433, 1523
BsmAI	GTCTC	3 cut(s)	111, 271, 870
BsmFI	GGGAC	1 cut(s)	49
BsnI	GGCC	1 cut(s)	248
Bso31I	GGTCTC	1 cut(s)	870
BsoBI	CYCGRG	2 cut(s)	1368, 1544
Bsp1286I	GDGCHC	1 cut(s)	1652
Bsp143I	GATC	7 cut(s)	556, 772, 1222, 1306, 1383, 1583, 1689
Bsp1720I	GCTNAGC	1 cut(s)	1412
BspACI	CCGC	1 cut(s)	1168
BspANI	GGCC	1 cut(s)	248
BspCNI	CTCAG	9 cut(s)	311, 685, 856, 880, 1293, 1321, 1404, 1586, 1621
BspDI	ATCGAT	1 cut(s)	1688
BspLI	GGNNCC	4 cut(s)	558, 690, 1308, 1425
BspMI	ACCTGC	2 cut(s)	161, 985
BspPI	GGATC	5 cut(s)	551, 564, 767, 1301, 1314
BspTI	CTTAAG	2 cut(s)	46, 1159
BspTNI	GGTCTC	1 cut(s)	870
BsrBI	CCGCTC	1 cut(s)	1170
BsrDI	GCAATG	3 cut(s)	928, 1148, 1204
BsrFI	RCCGGY	1 cut(s)	1071
BsrI	ACTGG	3 cut(s)	103, 263, 338
BssAI	RCCGGY	1 cut(s)	1071
BssECI	CCNNGG	1 cut(s)	872
BssMI	GATC	7 cut(s)	556, 772, 1222, 1306, 1383, 1583, 1689
BssSI	CACGAG	2 cut(s)	138, 581
Bst2BI	CACGAG	2 cut(s)	138, 581
Bst2UI	CCWGG	1 cut(s)	832
Bst4CI	ACNGT	4 cut(s)	511, 621, 1027, 1259
Bst6I	CTCTTC	2 cut(s)	379, 1449
BstAFI	CTTAAG	2 cut(s)	46, 1159
BstBAI	YACGTR	1 cut(s)	383
BstC8I	GCNNGC	3 cut(s)	1378, 1483, 1610
BstDSI	CCRYGG	1 cut(s)	872
BstEII	GGTNACC	1 cut(s)	116
BstF5I	GGATG	4 cut(s)	667, 808, 854, 1208
BstHHI	GCGC	1 cut(s)	1141
BstKTI	GATC	7 cut(s)	559, 775, 1225, 1309, 1386, 1586, 1692
BstMAI	GTCTC	3 cut(s)	111, 271, 870
BstMBI	GATC	7 cut(s)	556, 772, 1222, 1306, 1383, 1583, 1689
BstMWI	GCNNNNNNNGC	3 cut(s)	37, 448, 662
BstNI	CCWGG	1 cut(s)	832
BstNSI	RCATGY	4 cut(s)	202, 859, 1096, 1658
BstPI	GGTNACC	1 cut(s)	116
BstSCI	CCNGG	2 cut(s)	565, 830
BstSFI	CTRYAG	1 cut(s)	1119
BstV1I	GCAGC	4 cut(s)	271, 998, 1301, 1360
BstV2I	GAAGAC	2 cut(s)	1324, 1347
BstX2I	RGATCY	4 cut(s)	556, 1222, 1306, 1583
BstXI	CCANNNNNNTGG	1 cut(s)	1598
BstYI	RGATCY	4 cut(s)	556, 1222, 1306, 1583
Bsu15I	ATCGAT	1 cut(s)	1688
BsuRI	GGCC	1 cut(s)	248
BsuTUI	ATCGAT	1 cut(s)	1688
BtgI	CCRYGG	1 cut(s)	872
BtgZI	GCGATG	1 cut(s)	1419
BtsCI	GGATG	4 cut(s)	667, 808, 854, 1208
BtsI	GCAGTG	1 cut(s)	1176
BtsIMutI	CAGTG	5 cut(s)	507, 617, 1176, 1326, 1626
BveI	ACCTGC	2 cut(s)	161, 985
Cac8I	GCNNGC	3 cut(s)	1378, 1483, 1610
CaiI	CAGNNNCTG	1 cut(s)	269
CfoI	GCGC	1 cut(s)	1141
Cfr10I	RCCGGY	1 cut(s)	1071
Cfr13I	GGNCC	2 cut(s)	345, 1423
ClaI	ATCGAT	1 cut(s)	1688
Csp6I	GTAC	3 cut(s)	205, 1134, 1276
CspAI	ACCGGT	1 cut(s)	1071
CviAII	CATG	5 cut(s)	199, 540, 856, 1093, 1655
CviQI	GTAC	3 cut(s)	205, 1134, 1276
DpnI	GATC	7 cut(s)	558, 774, 1224, 1308, 1385, 1585, 1691
DpnII	GATC	7 cut(s)	556, 772, 1222, 1306, 1383, 1583, 1689
EaeI	YGGCCR	1 cut(s)	246
Eam1104I	CTCTTC	2 cut(s)	379, 1449
EarI	CTCTTC	2 cut(s)	379, 1449
Ecl136II	GAGCTC	1 cut(s)	1650
Eco24I	GRGCYC	1 cut(s)	1652
Eco31I	GGTCTC	1 cut(s)	870
Eco47I	GGWCC	2 cut(s)	345, 1423
Eco53kI	GAGCTC	1 cut(s)	1650
Eco57I	CTGAAG	3 cut(s)	267, 706, 1359
Eco72I	CACGTG	1 cut(s)	383
Eco88I	CYCGRG	2 cut(s)	1368, 1544
Eco91I	GGTNACC	1 cut(s)	116
EcoICRI	GAGCTC	1 cut(s)	1650
EcoO65I	GGTNACC	1 cut(s)	116
EcoRI	GAATTC	1 cut(s)	988
EcoRII	CCWGG	1 cut(s)	830
EcoT22I	ATGCAT	1 cut(s)	610
EcoT38I	GRGCYC	1 cut(s)	1652
FaeI	CATG	5 cut(s)	202, 543, 859, 1096, 1658
FaqI	GGGAC	1 cut(s)	49
FatI	CATG	5 cut(s)	198, 539, 855, 1092, 1654
FbaI	TGATCA	1 cut(s)	1383
Fnu4HI	GCNGC	4 cut(s)	260, 1012, 1290, 1374
FokI	GGATG	4 cut(s)	674, 815, 861, 1215
FriOI	GRGCYC	1 cut(s)	1652
Fsp4HI	GCNGC	4 cut(s)	260, 1012, 1290, 1374
FspBI	CTAG	4 cut(s)	492, 648, 777, 1089
FspI	TGCGCA	1 cut(s)	1140
GlaI	GCGC	1 cut(s)	1140
GluI	GCNGC	4 cut(s)	260, 1012, 1290, 1374
GsaI	CCCAGC	3 cut(s)	158, 426, 1131
HaeIII	GGCC	1 cut(s)	248
HapII	CCGG	2 cut(s)	566, 1072
HhaI	GCGC	1 cut(s)	1141
Hin1II	CATG	5 cut(s)	202, 543, 859, 1096, 1658
Hin6I	GCGC	1 cut(s)	1139
HinP1I	GCGC	1 cut(s)	1139
HpaII	CCGG	2 cut(s)	566, 1072
HphI	GGTGA	4 cut(s)	128, 748, 1271, 1457
Hpy166II	GTNNAC	2 cut(s)	348, 1564
Hpy188I	TCNGA	7 cut(s)	271, 286, 301, 1283, 1297, 1339, 1696
Hpy188III	TCNNGA	6 cut(s)	532, 554, 692, 789, 1228, 1544
Hpy8I	GTNNAC	2 cut(s)	348, 1564
HpyAV	CCTTC	3 cut(s)	949, 970, 1394
HpyCH4III	ACNGT	4 cut(s)	511, 621, 1027, 1259
HpyCH4IV	ACGT	1 cut(s)	382
HpyF10VI	GCNNNNNNNGC	3 cut(s)	37, 448, 662
HpySE526I	ACGT	1 cut(s)	382
Hsp92II	CATG	5 cut(s)	202, 543, 859, 1096, 1658
HspAI	GCGC	1 cut(s)	1139
Ksp22I	TGATCA	1 cut(s)	1383
Kzo9I	GATC	7 cut(s)	556, 772, 1222, 1306, 1383, 1583, 1689
LmnI	GCTCC	3 cut(s)	80, 256, 653
Lsp1109I	GCAGC	4 cut(s)	271, 998, 1301, 1360
LweI	GCATC	4 cut(s)	595, 652, 789, 908
MaeI	CTAG	4 cut(s)	492, 648, 777, 1089
MaeII	ACGT	1 cut(s)	382
MaeIII	GTNAC	5 cut(s)	116, 220, 511, 1163, 1391
MalI	GATC	7 cut(s)	558, 774, 1224, 1308, 1385, 1585, 1691
MbiI	CCGCTC	1 cut(s)	1170
MboI	GATC	7 cut(s)	556, 772, 1222, 1306, 1383, 1583, 1689
MflI	RGATCY	4 cut(s)	556, 1222, 1306, 1583
MhlI	GDGCHC	1 cut(s)	1652
MlsI	TGGCCA	1 cut(s)	248
MluNI	TGGCCA	1 cut(s)	248
MlyI	GAGTC	5 cut(s)	14, 335, 679, 836, 1640
MmeI	TCCRAC	1 cut(s)	1615
Mox20I	TGGCCA	1 cut(s)	248
Mph1103I	ATGCAT	1 cut(s)	610
MscI	TGGCCA	1 cut(s)	248
MseI	TTAA	6 cut(s)	47, 321, 732, 819, 1160, 1302
MslI	CAYNNNNRTG	2 cut(s)	197, 1197
Msp20I	TGGCCA	1 cut(s)	248
MspA1I	CMGCKG	1 cut(s)	470
MspCI	CTTAAG	2 cut(s)	46, 1159
MspI	CCGG	2 cut(s)	566, 1072
MspR9I	CCNGG	2 cut(s)	567, 832
MvaI	CCWGG	1 cut(s)	832
MwoI	GCNNNNNNNGC	3 cut(s)	37, 448, 662
NciI	CCSGG	1 cut(s)	567
NdeII	GATC	7 cut(s)	556, 772, 1222, 1306, 1383, 1583, 1689
NlaIII	CATG	5 cut(s)	202, 543, 859, 1096, 1658
NlaIV	GGNNCC	4 cut(s)	558, 690, 1308, 1425
NmuCI	GTSAC	1 cut(s)	116
NsbI	TGCGCA	1 cut(s)	1140
NsiI	ATGCAT	1 cut(s)	610
NspI	RCATGY	4 cut(s)	202, 859, 1096, 1658
PaeR7I	CTCGAG	1 cut(s)	1544
PciI	ACATGT	1 cut(s)	855
PcsI	WCGNNNNNNNCGW	1 cut(s)	1401
PfeI	GAWTC	6 cut(s)	294, 792, 1148, 1231, 1356, 1540
PflMI	CCANNNNNTGG	1 cut(s)	240
PinAI	ACCGGT	1 cut(s)	1071
PkrI	GCNGC	4 cut(s)	261, 1013, 1291, 1375
PleI	GAGTC	5 cut(s)	13, 334, 678, 835, 1639
PmaCI	CACGTG	1 cut(s)	383
PmlI	CACGTG	1 cut(s)	383
PpsI	GAGTC	5 cut(s)	13, 334, 678, 835, 1639
Ppu21I	YACGTR	1 cut(s)	383
PscI	ACATGT	1 cut(s)	855
Psp124BI	GAGCTC	1 cut(s)	1652
Psp6I	CCWGG	1 cut(s)	830
PspCI	CACGTG	1 cut(s)	383
PspEI	GGTNACC	1 cut(s)	116
PspFI	CCCAGC	3 cut(s)	154, 422, 1127
PspGI	CCWGG	1 cut(s)	830
PspN4I	GGNNCC	4 cut(s)	558, 690, 1308, 1425
PspPI	GGNCC	2 cut(s)	345, 1423
PstNI	CAGNNNCTG	1 cut(s)	269
PsuI	RGATCY	4 cut(s)	556, 1222, 1306, 1583
PvuII	CAGCTG	1 cut(s)	470
RsaI	GTAC	3 cut(s)	206, 1135, 1277
RsaNI	GTAC	3 cut(s)	205, 1134, 1276
RseI	CAYNNNNRTG	2 cut(s)	197, 1197
SacI	GAGCTC	1 cut(s)	1652
SaqAI	TTAA	6 cut(s)	47, 321, 732, 819, 1160, 1302
SatI	GCNGC	4 cut(s)	260, 1012, 1290, 1374
Sau3AI	GATC	7 cut(s)	556, 772, 1222, 1306, 1383, 1583, 1689
Sau96I	GGNCC	2 cut(s)	345, 1423
ScaI	AGTACT	1 cut(s)	1135
SchI	GAGTC	5 cut(s)	14, 335, 679, 836, 1640
ScrFI	CCNGG	2 cut(s)	567, 832
SduI	GDGCHC	1 cut(s)	1652
SfaNI	GCATC	4 cut(s)	595, 652, 789, 908
SfcI	CTRYAG	1 cut(s)	1119
Sfr274I	CTCGAG	1 cut(s)	1544
SinI	GGWCC	2 cut(s)	345, 1423
SlaI	CTCGAG	1 cut(s)	1544
SmiMI	CAYNNNNRTG	2 cut(s)	197, 1197
SmlI	CTYRAG	4 cut(s)	46, 59, 1159, 1544
SmoI	CTYRAG	4 cut(s)	46, 59, 1159, 1544
SpeI	ACTAGT	1 cut(s)	647
SsiI	CCGC	1 cut(s)	1168
SspMI	CTAG	4 cut(s)	492, 648, 777, 1089
SstI	GAGCTC	1 cut(s)	1652
StyD4I	CCNGG	2 cut(s)	565, 830
TaaI	ACNGT	4 cut(s)	511, 621, 1027, 1259
TaiI	ACGT	1 cut(s)	385
TaqI	TCGA	3 cut(s)	790, 1545, 1688
TatI	WGTACW	1 cut(s)	1133
TfiI	GAWTC	6 cut(s)	294, 792, 1148, 1231, 1356, 1540
Tru1I	TTAA	6 cut(s)	47, 321, 732, 819, 1160, 1302
Tru9I	TTAA	6 cut(s)	47, 321, 732, 819, 1160, 1302
TscAI	CASTG	5 cut(s)	514, 624, 1183, 1333, 1633
TseFI	GTSAC	1 cut(s)	116
TseI	GCWGC	4 cut(s)	259, 1011, 1289, 1373
Tsp45I	GTSAC	1 cut(s)	116
TspDTI	ATGAA	3 cut(s)	528, 784, 1674
TspGWI	ACGGA	1 cut(s)	1036
TspRI	CASTG	5 cut(s)	514, 624, 1183, 1333, 1633
Van91I	CCANNNNNTGG	1 cut(s)	240
Vha464I	CTTAAG	2 cut(s)	46, 1159
VpaK11BI	GGWCC	2 cut(s)	345, 1423
XapI	RAATTY	5 cut(s)	23, 146, 547, 988, 1033
XceI	RCATGY	4 cut(s)	202, 859, 1096, 1658
XcmI	CCANNNNNNNNNTGG	4 cut(s)	74, 110, 241, 474
XhoI	CTCGAG	1 cut(s)	1544
XspI	CTAG	4 cut(s)	492, 648, 777, 1089
ZrmI	AGTACT	1 cut(s)	1135
Zsp2I	ATGCAT	1 cut(s)	610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.