Rorug02G0486800

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
61635919 .. 61636197
279 bp
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UTR
Exon/CDS
Intron
Rorug02G0486800.1

Sequence Viewer

Length: 279 bp
ATGGTTACAAGAGACACTATGGTTTGTCCTAAACCTCGCCGTTTGGATGTCAACATCCTCCTTGGAGAGGGTTCATTTACAGAACAAATAGTCTCGCCTCACCCATTTACTAACGGGTCACCACCAAGCAGAGTTGCTAACCCATTAGTTCAGGATGTTCGATTTCGGGATGACAAGCTCGCTACAATGCCACCACTAATTTCACCCGTCCCTCCTCCTCCTCGGGCCAGTTTTGGGAGCAAACCACGAGTGAGGATCGAGGGGTTTAATTGCGGCTAG

Protein Analysis

92

Amino Acids

10.11

Weight (kDa)

9.83

Isoelectric Point (pI)

61.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 273
AclWI GGATC 1 cut(s) 263
AfiI CCNNNNNNNGG 2 cut(s) 67, 234
AluBI AGCT 1 cut(s) 178
AluI AGCT 1 cut(s) 178
Alw26I GTCTC 2 cut(s) 6, 97
AlwI GGATC 1 cut(s) 263
Ama87I CYCGRG 1 cut(s) 222
AoxI GGCC 1 cut(s) 225
AspS9I GGNCC 1 cut(s) 225
AsuHPI GGTGA 3 cut(s) 92, 111, 195
AvaI CYCGRG 1 cut(s) 222
BauI CACGAG 1 cut(s) 246
BceAI ACGGC 1 cut(s) 24
BcoDI GTCTC 2 cut(s) 6, 97
BfaI CTAG 1 cut(s) 277
BisI GCNGC 1 cut(s) 274
BlsI GCNGC 1 cut(s) 275
BmeT110I CYCGRG 1 cut(s) 222
BmgT120I GGNCC 1 cut(s) 225
BsaJI CCNNGG 2 cut(s) 61, 221
Bsc4I CCNNNNNNNGG 2 cut(s) 67, 234
Bse1I ACTGG 1 cut(s) 228
BseDI CCNNGG 2 cut(s) 61, 221
BseGI GGATG 4 cut(s) 52, 54, 160, 175
BseLI CCNNNNNNNGG 2 cut(s) 67, 234
BseNI ACTGG 1 cut(s) 228
BseRI GAGGAG 3 cut(s) 204, 207, 210
BshFI GGCC 1 cut(s) 227
BsiHKCI CYCGRG 1 cut(s) 222
BslFI GGGAC 1 cut(s) 194
BslI CCNNNNNNNGG 2 cut(s) 67, 234
BsmAI GTCTC 2 cut(s) 6, 97
BsmFI GGGAC 1 cut(s) 194
BsnI GGCC 1 cut(s) 227
BsoBI CYCGRG 1 cut(s) 222
Bsp143I GATC 1 cut(s) 255
BspACI CCGC 1 cut(s) 273
BspANI GGCC 1 cut(s) 227
BspPI GGATC 1 cut(s) 263
BsrI ACTGG 1 cut(s) 228
BssECI CCNNGG 2 cut(s) 61, 221
BssMI GATC 1 cut(s) 255
BssSI CACGAG 1 cut(s) 246
BssT1I CCWWGG 1 cut(s) 61
Bst2BI CACGAG 1 cut(s) 246
BstC8I GCNNGC 1 cut(s) 180
BstEII GGTNACC 1 cut(s) 117
BstENI CCTNNNNNAGG 1 cut(s) 65
BstF5I GGATG 4 cut(s) 52, 54, 160, 175
BstKTI GATC 1 cut(s) 258
BstMAI GTCTC 2 cut(s) 6, 97
BstMBI GATC 1 cut(s) 255
BstPI GGTNACC 1 cut(s) 117
BsuRI GGCC 1 cut(s) 227
BtsCI GGATG 4 cut(s) 52, 54, 160, 175
Cac8I GCNNGC 1 cut(s) 180
Cfr13I GGNCC 1 cut(s) 225
CviJI RGCY 3 cut(s) 178, 227, 276
CviKI_1 RGCY 3 cut(s) 178, 227, 276
DpnI GATC 1 cut(s) 257
DpnII GATC 1 cut(s) 255
Eco130I CCWWGG 1 cut(s) 61
Eco88I CYCGRG 1 cut(s) 222
Eco91I GGTNACC 1 cut(s) 117
EcoNI CCTNNNNNAGG 1 cut(s) 65
EcoO65I GGTNACC 1 cut(s) 117
EcoT14I CCWWGG 1 cut(s) 61
ErhI CCWWGG 1 cut(s) 61
FaiI YATR 1 cut(s) 20
FaqI GGGAC 1 cut(s) 194
Fnu4HI GCNGC 1 cut(s) 274
FokI GGATG 4 cut(s) 41, 59, 167, 182
Fsp4HI GCNGC 1 cut(s) 274
FspBI CTAG 1 cut(s) 277
GluI GCNGC 1 cut(s) 274
HaeIII GGCC 1 cut(s) 227
HincII GTYRAC 1 cut(s) 52
HindII GTYRAC 1 cut(s) 52
HphI GGTGA 3 cut(s) 92, 111, 195
Hpy166II GTNNAC 1 cut(s) 52
Hpy188III TCNNGA 2 cut(s) 152, 167
Hpy8I GTNNAC 1 cut(s) 52
Kzo9I GATC 1 cut(s) 255
LmnI GCTCC 1 cut(s) 237
LpnPI CCDG 2 cut(s) 137, 241
MaeI CTAG 1 cut(s) 277
MaeIII GTNAC 2 cut(s) 4, 117
MalI GATC 1 cut(s) 257
MboI GATC 1 cut(s) 255
MluCI AATT 2 cut(s) 198, 268
MseI TTAA 1 cut(s) 267
NdeII GATC 1 cut(s) 255
NmuCI GTSAC 1 cut(s) 117
PkrI GCNGC 1 cut(s) 275
PspEI GGTNACC 1 cut(s) 117
PspPI GGNCC 1 cut(s) 225
SaqAI TTAA 1 cut(s) 267
SatI GCNGC 1 cut(s) 274
Sau3AI GATC 1 cut(s) 255
Sau96I GGNCC 1 cut(s) 225
SetI ASST 2 cut(s) 37, 180
Sse9I AATT 2 cut(s) 198, 268
SsiI CCGC 1 cut(s) 273
SspMI CTAG 1 cut(s) 277
StyI CCWWGG 1 cut(s) 61
TaqI TCGA 2 cut(s) 160, 258
TasI AATT 2 cut(s) 198, 268
TauI GCSGC 1 cut(s) 276
Tru1I TTAA 1 cut(s) 267
Tru9I TTAA 1 cut(s) 267
TseFI GTSAC 1 cut(s) 117
Tsp45I GTSAC 1 cut(s) 117
TspDTI ATGAA 1 cut(s) 63
XagI CCTNNNNNAGG 1 cut(s) 65
XspI CTAG 1 cut(s) 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.