Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0006169

Physical Location & Seq

Genomic Coordinates Reverse (-)

37815462 .. 37817915

Gene Structure 2454 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029382

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGGAGTCCAAAACAAACCCAAAATTCTTGCTTTCCTTGCTTTTCTTAAGCCTCTGCCTCAAGTCCCATATCTGCTTTGGAGCTGACACCATCACAGCAAACCAGTCTCTCTCTGGTGACCAAACCATTGTTTCAGCTGGTGGGAAATTTGAGCTGGGTTTCTTCAAGGCAGGTAATACTTCAAACTACTACATAGGCATGTGGTACTACAAGACAATAGCACCAGAGCAAACCATAGTCTGGGTGGCCAATAGGGTGCAGCCAGTCTCTGATAGATTTTCTTCAGAGTTGAGAATTTCAGATGGTAATCTGGTGCTGTTTAATGAGTCCAAAGCCCCAATTTGGTCCACAGATGTCAGTTCATATTCAGTTTCTTCTATACGTGTAGTTCTTTTAGATAATGGAAACCTTGTGCTAAGAGCTGGGTCTAATTCATCTTTGCCTTTATGGCAAAGTTTTGATTATCCAGCTCATACCTTGCTACCGGAAGCTAGAATTGGGTTCAACAATGTTACAAACCGAACCCAAGTCCTGACTTCATGGAAGAATTCTGAGGATCCTGCACCGGGTCTTTTCTCTCTTGAGCTTGACCCGAATGGAACCGATGCATATTTCATACTGTGGAATAGGTCTAGGAAGTATTGGACTAGTGGAACTTGGGATGCAGAGAGTCATAGTTTCAGATTGGTTCCTGAGATGAGGCGTAACTACGTCTCCTTCAACTTTAGCTATGTTAAAAACAAAAATGAGAGCTACTTCACATATTCTCCTCATGATGCTAGGAAAACATCTCGATTCATAATGGATGTATCGGGTCAGGTTAAGCTACTTATTTCCTGGTGGCAACCTCAGGGATGGACCTTGTTTTGGTCTCAGCCGAGGAAACTATGCCAGGTTTATTCCTATTGTGGGGCATTTGGCAGTTGCGATGAGAAGTCCTTGTCCTTCTGTAATTGTTTATATGGTTTTGAGCCGAAATTGAAGGTGGATTGGGATTCGTGGGTTTATTCTGGTGGCTGCAAAAGACGGACCGCGCTGAATTTTGCTAATGCTACTACCAATAATGGGAAGCAAGACCGGTTTTTAGAAGTGCCGAGCATGTCTTTGCCTGAAAATAAAGTGTGTGTAAATGCTGGGAGTAATGCGCAATGTGAATCAATCTGCTTAAGTAACCACTCTTGCACTGCTTATTCTTATGATAGCAATGGATGTTCAATATGGATTGGAGATCTCTTCAATCTGCAACAACTCACAGCAGATGACGGTGATGGAAAAACTTTGTACCTCAGACTCGCAGCTTCCGAGTTCAAGGATCCAAAAAGTAAAAAGAGATTGATTATTGGAGTTGCAGTAGGCTCAGCTGTTGGGATAGCAGCTCTTTTAGGCCTTGTTGTGGTTAAAGTGTTGAGAAACAGAAATAAAGTGATTGGAAAATCAGTGGAGGGTTCATTGGTGGCATTTGAGTATAGACATCTTCAAGAAGTAACAAAGAACTTCTCGGAGAAATTGGGGGGAGGAGGTTTTGGTTCTGTCTTCAAGGGCACAATGCCTGATTCATCAGTCATAGCAGTGAAGAAGCTCGAAAGTGTTAGCCAAGGAGAGAAGCAATTCAGAACAGAAGTCAGCACAATTGGGACAATCCAACATGTCAATCTTGTTCGGCTTCGTGGGTTCTGCTCTGAAGGTGCCAAGAGGTTGTTGGTCTATGATTACATGCCTAATGGATCTCTGGATGCTCACCTTTTCAATCATCCAAGTGATGTTTTGGAGTGGAATACAAGATACCGAATTTCTCTGGGTACAGCAAGAGGGTTGGCTTATCTTCATGAGAAATGTAGAGATTGTATCATACATTGTGACATAAAACCAGAGAACATTCTCCTAGATACCGAACTTTGTCCCAAAGTAGCAGACTTTGGCCTGGCAAAACTTGTTGGAAGAGAATTCAGCCGAGTCCTGACCACAATGAGAGGCACGCCAGGCTATCTTGCACCAGAGTGGATTTCAGGAGTGGCAGTCACAGCAAAAGCTGATGTTTACAGCTATGGAATGATGCTTTTCGAAATTGTATCAGGAAGACGAAACTCTGAGCCATCTGAAGACGGCAAAATTAGATTCTTCCCAACTCGGGCTGCTGGAGTGATCACGAGTAATGAAGAAGGCGATGTGCTGAGCCTATTGGACCCGAAATTAGGGAGAAATGGTGATGTGGAAGAGATCATGAGGGTTCTTAGAGTTGCTTGCTGGTGTGTCCAAGATGATGAGGTTCATAGACCATCAATGGGTCAAGTGGTGCAGATTCTCGAGGGGGTTTTGGGTGTGAACTTGCCCTCAGTTCCAAGATCACTCCAACTCTTTGGAGATAGCCAGCACATAGTTTTCTTCACCGAGTCATCTTCAAGGCAGATCTCACATCCATCAAGCAATAATACATTAACAGCTTCATCGATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

818

Amino Acids

90.96

Weight (kDa)

8.34

Isoelectric Point (pI)

37.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	78 - 182	5.7e-32	D-mannose binding lectin
S_locus_glycop	PF00954	215 - 326	5.2e-25	S-locus glycoprotein domain
PAN_2	PF08276	357 - 413	1.8e-13	PAN-like domain
PK_Tyr_Ser-Thr	PF07714	499 - 766	5.5e-40	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	500 - 766	9e-46	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19130
fragaria_vesca	FvH4_6g44310
malus_domestica	MD09G1098900.v1.1 MD17G1087200.v1.1
prunus_persica	Prupe.3G227300_v2.0.a1 Prupe.3G227500_v2.0.a1
pyrus_communis	pycom09g02260 pycom17g08440
rosa_chinensis	RchiOBHm_Chr2g0161171 RchiOBHm_Chr2g0161191
rosa_laevigata	RLG00000021264 RLG00000021266 RLG00000029382
rosa_multiflora	Rmu_sc0006420.1_g000040 Rmu_sc0006420.1_g000045
rosa_roxburghii	Rroxscaffold_2G00089040 Rroxscaffold_2G00089060
rosa_rugosa	Rorug02G0486800 Rorug02G0486900
rosa_samantha	Rh2AG553500 Rh2BG567200 Rh2CG537300 Rh2CG537500 Rh2DG576500 Rh2DG576600
rosa_wichuraiana	Rw2G045780 Rw2G045800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1146
Acc36I	ACCTGC	1 cut(s)	161
AccB1I	GGYRCC	1 cut(s)	1685
AccB7I	CCANNNNNTGG	1 cut(s)	240
AccII	CGCG	1 cut(s)	1034
AciI	CCGC	1 cut(s)	1032
AclWI	GGATC	5 cut(s)	551, 564, 1307, 1320, 1732
AcoI	YGGCCR	1 cut(s)	246
AcsI	RAATTY	7 cut(s)	23, 146, 294, 547, 1039, 1788, 1943
AcuI	CTGAAG	3 cut(s)	267, 1701, 2118
AfaI	GTAC	3 cut(s)	206, 1283, 1801
AflII	CTTAAG	2 cut(s)	46, 1165
AflIII	ACRYGT	2 cut(s)	382, 1645
AgeI	ACCGGT	1 cut(s)	1077
AhlI	ACTAGT	1 cut(s)	647
AjnI	CCWGG	4 cut(s)	836, 891, 1920, 1978
AjuI	GAANNNNNNNTTGG	2 cut(s)	480, 512
AleI	CACNNNNGTG	1 cut(s)	1996
Alw26I	GTCTC	4 cut(s)	111, 271, 718, 876
AlwI	GGATC	5 cut(s)	551, 564, 1307, 1320, 1732
AlwNI	CAGNNNCTG	1 cut(s)	269
Ama87I	CYCGRG	2 cut(s)	2127, 2303
AoxI	GGCC	3 cut(s)	246, 1384, 1918
ApeKI	GCWGC	5 cut(s)	259, 1017, 1295, 1373, 2132
ApoI	RAATTY	7 cut(s)	23, 146, 294, 547, 1039, 1788, 1943
AsiGI	ACCGGT	1 cut(s)	1077
Asp700I	GAANNNNTTC	1 cut(s)	1607
AspLEI	GCGC	2 cut(s)	1036, 1147
AspS9I	GGNCC	4 cut(s)	345, 858, 1029, 2182
AsuC2I	CCSGG	1 cut(s)	567
AsuHPI	GGTGA	5 cut(s)	128, 1277, 1730, 2216, 2377
AsuII	TTCGAA	1 cut(s)	2061
AvaI	CYCGRG	2 cut(s)	2127, 2303
AvaII	GGWCC	4 cut(s)	345, 858, 1029, 2182
AxyI	CCTNAGG	1 cut(s)	849
BaeGI	GKGCMC	1 cut(s)	1544
BalI	TGGCCA	1 cut(s)	248
BamHI	GGATCC	2 cut(s)	556, 1312
BanI	GGYRCC	1 cut(s)	1685
BauI	CACGAG	1 cut(s)	2146
BbsI	GAAGAC	3 cut(s)	1525, 2083, 2106
BbvI	GCAGC	5 cut(s)	271, 1004, 1307, 1385, 2119
BccI	CCATC	7 cut(s)	98, 296, 849, 1262, 2101, 2284, 2425
BceAI	ACGGC	1 cut(s)	2119
BciT130I	CCWGG	4 cut(s)	838, 893, 1922, 1980
BclI	TGATCA	1 cut(s)	2142
BcnI	CCSGG	1 cut(s)	567
BcoDI	GTCTC	4 cut(s)	111, 271, 718, 876
BcuI	ACTAGT	1 cut(s)	647
BfaI	CTAG	5 cut(s)	492, 633, 648, 780, 1883
BfrI	CTTAAG	2 cut(s)	46, 1165
BfuAI	ACCTGC	1 cut(s)	161
BglI	GCCNNNNNGGC	1 cut(s)	448
BglII	AGATCT	2 cut(s)	1228, 2406
BisI	GCNGC	5 cut(s)	260, 1018, 1296, 1374, 2133
BlpI	GCTNAGC	2 cut(s)	1357, 2171
BlsI	GCNGC	5 cut(s)	261, 1019, 1297, 1375, 2134
Bme1390I	CCNGG	5 cut(s)	567, 838, 893, 1922, 1980
Bme18I	GGWCC	4 cut(s)	345, 858, 1029, 2182
BmeT110I	CYCGRG	2 cut(s)	2127, 2303
BmgT120I	GGNCC	4 cut(s)	345, 858, 1029, 2182
BmiI	GGNNCC	6 cut(s)	558, 601, 690, 1314, 1687, 2184
BmrFI	CCNGG	5 cut(s)	567, 838, 893, 1922, 1980
BmsI	GCATC	5 cut(s)	595, 652, 766, 1723, 2043
BpiI	GAAGAC	3 cut(s)	1525, 2083, 2106
BpmI	CTGGAG	1 cut(s)	2157
Bpu1102I	GCTNAGC	2 cut(s)	1357, 2171
Bpu14I	TTCGAA	1 cut(s)	2061
BpuEI	CTTGAG	2 cut(s)	44, 602
BpuMI	CCSGG	1 cut(s)	567
Bsa29I	ATCGAT	1 cut(s)	2447
BsaAI	YACGTR	1 cut(s)	383
BsaBI	GATNNNNATC	1 cut(s)	306
BsaI	GGTCTC	1 cut(s)	876
BsaJI	CCNNGG	2 cut(s)	878, 1594
BsaWI	WCCGGW	2 cut(s)	484, 1077
Bse118I	RCCGGY	1 cut(s)	1077
Bse1I	ACTGG	2 cut(s)	103, 263
Bse21I	CCTNAGG	1 cut(s)	849
Bse3DI	GCAATG	2 cut(s)	1154, 1210
Bse8I	GATNNNNATC	1 cut(s)	306
BseBI	CCWGG	4 cut(s)	838, 893, 1922, 1980
BseCI	ATCGAT	1 cut(s)	2447
BseDI	CCNNGG	2 cut(s)	878, 1594
BseGI	GGATG	7 cut(s)	667, 811, 860, 1214, 1738, 1750, 2413
BseJI	GATNNNNATC	1 cut(s)	306
BseMI	GCAATG	2 cut(s)	1154, 1210
BseMII	CTCAG	9 cut(s)	543, 684, 863, 887, 1300, 1371, 2079, 2162, 2346
BseNI	ACTGG	2 cut(s)	103, 263
BseRI	GAGGAG	2 cut(s)	759, 1530
BseSI	GKGCMC	1 cut(s)	1544
BseXI	GCAGC	5 cut(s)	271, 1004, 1307, 1385, 2119
BseYI	CCCAGC	3 cut(s)	154, 422, 1133
BsgI	GTGCAG	3 cut(s)	278, 546, 2315
Bsh1236I	CGCG	1 cut(s)	1034
BshFI	GGCC	3 cut(s)	248, 1386, 1920
BshNI	GGYRCC	1 cut(s)	1685
BshTI	ACCGGT	1 cut(s)	1077
BshVI	ATCGAT	1 cut(s)	2447
BsiHKCI	CYCGRG	2 cut(s)	2127, 2303
BsiSI	CCGG	3 cut(s)	485, 566, 1078
BslFI	GGGAC	3 cut(s)	49, 1648, 1884
BsmAI	GTCTC	4 cut(s)	111, 271, 718, 876
BsmBI	CGTCTC	1 cut(s)	718
BsmFI	GGGAC	3 cut(s)	49, 1648, 1884
BsnI	GGCC	3 cut(s)	248, 1386, 1920
Bso31I	GGTCTC	1 cut(s)	876
BsoBI	CYCGRG	2 cut(s)	2127, 2303
Bsp119I	TTCGAA	1 cut(s)	2061
Bsp1286I	GDGCHC	1 cut(s)	1544
Bsp143I	GATC	9 cut(s)	556, 1228, 1312, 1724, 2142, 2217, 2342, 2406, 2448
Bsp1720I	GCTNAGC	2 cut(s)	1357, 2171
BspACI	CCGC	1 cut(s)	1032
BspANI	GGCC	3 cut(s)	248, 1386, 1920
BspCNI	CTCAG	9 cut(s)	544, 685, 862, 886, 1299, 1370, 2080, 2163, 2345
BspDI	ATCGAT	1 cut(s)	2447
BspFNI	CGCG	1 cut(s)	1034
BspHI	TCATGA	3 cut(s)	772, 1825, 2220
BspLI	GGNNCC	6 cut(s)	558, 601, 690, 1314, 1687, 2184
BspMI	ACCTGC	1 cut(s)	161
BspPI	GGATC	5 cut(s)	551, 564, 1307, 1320, 1732
BspT104I	TTCGAA	1 cut(s)	2061
BspT107I	GGYRCC	1 cut(s)	1685
BspTI	CTTAAG	2 cut(s)	46, 1165
BspTNI	GGTCTC	1 cut(s)	876
BsrDI	GCAATG	2 cut(s)	1154, 1210
BsrFI	RCCGGY	1 cut(s)	1077
BsrI	ACTGG	2 cut(s)	103, 263
BssAI	RCCGGY	1 cut(s)	1077
BssECI	CCNNGG	2 cut(s)	878, 1594
BssMI	GATC	9 cut(s)	556, 1228, 1312, 1724, 2142, 2217, 2342, 2406, 2448
BssSI	CACGAG	1 cut(s)	2146
BssT1I	CCWWGG	1 cut(s)	1594
Bst2BI	CACGAG	1 cut(s)	2146
Bst2UI	CCWGG	4 cut(s)	838, 893, 1922, 1980
Bst4CI	ACNGT	2 cut(s)	621, 1265
Bst6I	CTCTTC	3 cut(s)	1238, 1933, 2208
BstAFI	CTTAAG	2 cut(s)	46, 1165
BstBAI	YACGTR	1 cut(s)	383
BstBI	TTCGAA	1 cut(s)	2061
BstC8I	GCNNGC	3 cut(s)	1976, 2242, 2369
BstEII	GGTNACC	1 cut(s)	116
BstF5I	GGATG	7 cut(s)	667, 811, 860, 1214, 1738, 1750, 2413
BstFNI	CGCG	1 cut(s)	1034
BstHHI	GCGC	2 cut(s)	1036, 1147
BstKTI	GATC	9 cut(s)	559, 1231, 1315, 1727, 2145, 2220, 2345, 2409, 2451
BstMAI	GTCTC	4 cut(s)	111, 271, 718, 876
BstMBI	GATC	9 cut(s)	556, 1228, 1312, 1724, 2142, 2217, 2342, 2406, 2448
BstMWI	GCNNNNNNNGC	4 cut(s)	37, 448, 1980, 2021
BstNI	CCWGG	4 cut(s)	838, 893, 1922, 1980
BstNSI	RCATGY	4 cut(s)	202, 1102, 1649, 1717
BstPI	GGTNACC	1 cut(s)	116
BstSCI	CCNGG	5 cut(s)	565, 836, 891, 1920, 1978
BstSLI	GKGCMC	1 cut(s)	1544
BstUI	CGCG	1 cut(s)	1034
BstV1I	GCAGC	5 cut(s)	271, 1004, 1307, 1385, 2119
BstV2I	GAAGAC	3 cut(s)	1525, 2083, 2106
BstX2I	RGATCY	5 cut(s)	556, 1228, 1312, 1724, 2406
BstXI	CCANNNNNNTGG	1 cut(s)	2357
BstYI	RGATCY	5 cut(s)	556, 1228, 1312, 1724, 2406
Bsu15I	ATCGAT	1 cut(s)	2447
Bsu36I	CCTNAGG	1 cut(s)	849
BsuRI	GGCC	3 cut(s)	248, 1386, 1920
BsuTUI	ATCGAT	1 cut(s)	2447
BtgZI	GCGATG	2 cut(s)	942, 2178
BtsCI	GGATG	7 cut(s)	667, 811, 860, 1214, 1738, 1750, 2413
BtsI	GCAGTG	2 cut(s)	1182, 1575
BtsIMutI	CAGTG	3 cut(s)	1182, 1443, 1575
BveI	ACCTGC	1 cut(s)	161
Cac8I	GCNNGC	3 cut(s)	1976, 2242, 2369
CaiI	CAGNNNCTG	1 cut(s)	269
CciI	TCATGA	3 cut(s)	772, 1825, 2220
CfoI	GCGC	2 cut(s)	1036, 1147
Cfr10I	RCCGGY	1 cut(s)	1077
Cfr13I	GGNCC	4 cut(s)	345, 858, 1029, 2182
ClaI	ATCGAT	1 cut(s)	2447
CpoI	CGGWCCG	1 cut(s)	1029
Csp6I	GTAC	3 cut(s)	205, 1282, 1800
CspAI	ACCGGT	1 cut(s)	1077
CspI	CGGWCCG	1 cut(s)	1029
CviAII	CATG	8 cut(s)	199, 540, 773, 1099, 1646, 1714, 1826, 2221
CviQI	GTAC	3 cut(s)	205, 1282, 1800
DpnI	GATC	9 cut(s)	558, 1230, 1314, 1726, 2144, 2219, 2344, 2408, 2450
DpnII	GATC	9 cut(s)	556, 1228, 1312, 1724, 2142, 2217, 2342, 2406, 2448
EaeI	YGGCCR	1 cut(s)	246
Eam1104I	CTCTTC	3 cut(s)	1238, 1933, 2208
EarI	CTCTTC	3 cut(s)	1238, 1933, 2208
Eco130I	CCWWGG	1 cut(s)	1594
Eco147I	AGGCCT	1 cut(s)	1386
Eco31I	GGTCTC	1 cut(s)	876
Eco47I	GGWCC	4 cut(s)	345, 858, 1029, 2182
Eco57I	CTGAAG	3 cut(s)	267, 1701, 2118
Eco81I	CCTNAGG	1 cut(s)	849
Eco88I	CYCGRG	2 cut(s)	2127, 2303
Eco91I	GGTNACC	1 cut(s)	116
EcoO65I	GGTNACC	1 cut(s)	116
EcoRI	GAATTC	2 cut(s)	547, 1943
EcoRII	CCWGG	4 cut(s)	836, 891, 1920, 1978
EcoT14I	CCWWGG	1 cut(s)	1594
EcoT22I	ATGCAT	1 cut(s)	610
ErhI	CCWWGG	1 cut(s)	1594
Esp3I	CGTCTC	1 cut(s)	718
FaeI	CATG	8 cut(s)	202, 543, 776, 1102, 1649, 1717, 1829, 2224
FaqI	GGGAC	3 cut(s)	49, 1648, 1884
FatI	CATG	8 cut(s)	198, 539, 772, 1098, 1645, 1713, 1825, 2220
FbaI	TGATCA	1 cut(s)	2142
Fnu4HI	GCNGC	5 cut(s)	260, 1018, 1296, 1374, 2133
FokI	GGATG	7 cut(s)	674, 818, 867, 1221, 1737, 1745, 2400
Fsp4HI	GCNGC	5 cut(s)	260, 1018, 1296, 1374, 2133
FspBI	CTAG	5 cut(s)	492, 633, 648, 780, 1883
FspI	TGCGCA	1 cut(s)	1146
GlaI	GCGC	2 cut(s)	1035, 1146
GluI	GCNGC	5 cut(s)	260, 1018, 1296, 1374, 2133
GsaI	CCCAGC	3 cut(s)	158, 426, 1137
GsuI	CTGGAG	1 cut(s)	2157
HaeIII	GGCC	3 cut(s)	248, 1386, 1920
HapII	CCGG	3 cut(s)	485, 566, 1078
HhaI	GCGC	2 cut(s)	1036, 1147
Hin1II	CATG	8 cut(s)	202, 543, 776, 1102, 1649, 1717, 1829, 2224
Hin6I	GCGC	2 cut(s)	1034, 1145
HinP1I	GCGC	2 cut(s)	1034, 1145
HpaII	CCGG	3 cut(s)	485, 566, 1078
HphI	GGTGA	5 cut(s)	128, 1277, 1730, 2216, 2377
Hpy166II	GTNNAC	3 cut(s)	348, 2038, 2323
Hpy8I	GTNNAC	3 cut(s)	348, 2038, 2323
HpyAV	CCTTC	5 cut(s)	727, 955, 976, 1676, 2153
HpyCH4III	ACNGT	2 cut(s)	621, 1265
HpyCH4IV	ACGT	2 cut(s)	382, 711
HpyF10VI	GCNNNNNNNGC	4 cut(s)	37, 448, 1980, 2021
HpySE526I	ACGT	2 cut(s)	382, 711
Hsp92II	CATG	8 cut(s)	202, 543, 776, 1102, 1649, 1717, 1829, 2224
HspAI	GCGC	2 cut(s)	1034, 1145
Ksp22I	TGATCA	1 cut(s)	2142
Kzo9I	GATC	9 cut(s)	556, 1228, 1312, 1724, 2142, 2217, 2342, 2406, 2448
LmnI	GCTCC	1 cut(s)	80
Lsp1109I	GCAGC	5 cut(s)	271, 1004, 1307, 1385, 2119
LweI	GCATC	5 cut(s)	595, 652, 766, 1723, 2043
MaeI	CTAG	5 cut(s)	492, 633, 648, 780, 1883
MaeII	ACGT	2 cut(s)	382, 711
MaeIII	GTNAC	7 cut(s)	116, 511, 704, 1169, 1483, 1856, 2017
MalI	GATC	9 cut(s)	558, 1230, 1314, 1726, 2144, 2219, 2344, 2408, 2450
MboI	GATC	9 cut(s)	556, 1228, 1312, 1724, 2142, 2217, 2342, 2406, 2448
MfeI	CAATTG	1 cut(s)	1629
MflI	RGATCY	5 cut(s)	556, 1228, 1312, 1724, 2406
MhlI	GDGCHC	1 cut(s)	1544
MlsI	TGGCCA	1 cut(s)	248
MluNI	TGGCCA	1 cut(s)	248
MlyI	GAGTC	6 cut(s)	14, 335, 679, 1284, 1962, 2399
MmeI	TCCRAC	3 cut(s)	1666, 1915, 2374
Mox20I	TGGCCA	1 cut(s)	248
Mph1103I	ATGCAT	1 cut(s)	610
MroXI	GAANNNNTTC	1 cut(s)	1607
MscI	TGGCCA	1 cut(s)	248
MseI	TTAA	7 cut(s)	47, 321, 735, 822, 1166, 1398, 2435
MslI	CAYNNNNRTG	4 cut(s)	197, 1568, 1755, 1996
Msp20I	TGGCCA	1 cut(s)	248
MspA1I	CMGCKG	2 cut(s)	137, 1361
MspCI	CTTAAG	2 cut(s)	46, 1165
MspI	CCGG	3 cut(s)	485, 566, 1078
MspR9I	CCNGG	5 cut(s)	567, 838, 893, 1922, 1980
MunI	CAATTG	1 cut(s)	1629
MvaI	CCWGG	4 cut(s)	838, 893, 1922, 1980
MvnI	CGCG	1 cut(s)	1034
MwoI	GCNNNNNNNGC	4 cut(s)	37, 448, 1980, 2021
NciI	CCSGG	1 cut(s)	567
NdeII	GATC	9 cut(s)	556, 1228, 1312, 1724, 2142, 2217, 2342, 2406, 2448
NlaIII	CATG	8 cut(s)	202, 543, 776, 1102, 1649, 1717, 1829, 2224
NlaIV	GGNNCC	6 cut(s)	558, 601, 690, 1314, 1687, 2184
NmeAIII	GCCGAG	3 cut(s)	903, 1119, 1976
NmuCI	GTSAC	3 cut(s)	116, 1856, 2017
NsbI	TGCGCA	1 cut(s)	1146
NsiI	ATGCAT	1 cut(s)	610
NspI	RCATGY	4 cut(s)	202, 1102, 1649, 1717
NspV	TTCGAA	1 cut(s)	2061
OliI	CACNNNNGTG	1 cut(s)	1996
PaeR7I	CTCGAG	1 cut(s)	2303
PagI	TCATGA	3 cut(s)	772, 1825, 2220
PceI	AGGCCT	1 cut(s)	1386
PciI	ACATGT	1 cut(s)	1645
PcsI	WCGNNNNNNNCGW	1 cut(s)	1299
PdmI	GAANNNNTTC	1 cut(s)	1607
PfeI	GAWTC	6 cut(s)	795, 995, 1154, 1553, 2115, 2299
PflMI	CCANNNNNTGG	1 cut(s)	240
PinAI	ACCGGT	1 cut(s)	1077
PkrI	GCNGC	5 cut(s)	261, 1019, 1297, 1375, 2134
PleI	GAGTC	6 cut(s)	13, 334, 678, 1284, 1961, 2398
PpsI	GAGTC	6 cut(s)	13, 334, 678, 1284, 1961, 2398
Ppu21I	YACGTR	1 cut(s)	383
PscI	ACATGT	1 cut(s)	1645
Psp6I	CCWGG	4 cut(s)	836, 891, 1920, 1978
PspEI	GGTNACC	1 cut(s)	116
PspFI	CCCAGC	3 cut(s)	154, 422, 1133
PspGI	CCWGG	4 cut(s)	836, 891, 1920, 1978
PspN4I	GGNNCC	6 cut(s)	558, 601, 690, 1314, 1687, 2184
PspPI	GGNCC	4 cut(s)	345, 858, 1029, 2182
PstNI	CAGNNNCTG	1 cut(s)	269
PsuI	RGATCY	5 cut(s)	556, 1228, 1312, 1724, 2406
PvuII	CAGCTG	2 cut(s)	137, 1361
RsaI	GTAC	3 cut(s)	206, 1283, 1801
RsaNI	GTAC	3 cut(s)	205, 1282, 1800
RseI	CAYNNNNRTG	4 cut(s)	197, 1568, 1755, 1996
Rsr2I	CGGWCCG	1 cut(s)	1029
RsrII	CGGWCCG	1 cut(s)	1029
SaqAI	TTAA	7 cut(s)	47, 321, 735, 822, 1166, 1398, 2435
SatI	GCNGC	5 cut(s)	260, 1018, 1296, 1374, 2133
Sau3AI	GATC	9 cut(s)	556, 1228, 1312, 1724, 2142, 2217, 2342, 2406, 2448
Sau96I	GGNCC	4 cut(s)	345, 858, 1029, 2182
SchI	GAGTC	6 cut(s)	14, 335, 679, 1284, 1962, 2399
ScrFI	CCNGG	5 cut(s)	567, 838, 893, 1922, 1980
SduI	GDGCHC	1 cut(s)	1544
SfaNI	GCATC	5 cut(s)	595, 652, 766, 1723, 2043
Sfr274I	CTCGAG	1 cut(s)	2303
SfuI	TTCGAA	1 cut(s)	2061
SinI	GGWCC	4 cut(s)	345, 858, 1029, 2182
SlaI	CTCGAG	1 cut(s)	2303
SmiMI	CAYNNNNRTG	4 cut(s)	197, 1568, 1755, 1996
SmlI	CTYRAG	5 cut(s)	46, 59, 581, 1165, 2303
SmoI	CTYRAG	5 cut(s)	46, 59, 581, 1165, 2303
SpeI	ACTAGT	1 cut(s)	647
SseBI	AGGCCT	1 cut(s)	1386
SsiI	CCGC	1 cut(s)	1032
SspMI	CTAG	5 cut(s)	492, 633, 648, 780, 1883
StuI	AGGCCT	1 cut(s)	1386
StyD4I	CCNGG	5 cut(s)	565, 836, 891, 1920, 1978
StyI	CCWWGG	1 cut(s)	1594
TaaI	ACNGT	2 cut(s)	621, 1265
TaiI	ACGT	2 cut(s)	385, 714
TaqI	TCGA	5 cut(s)	793, 1581, 2061, 2304, 2447
TfiI	GAWTC	6 cut(s)	795, 995, 1154, 1553, 2115, 2299
Tru1I	TTAA	7 cut(s)	47, 321, 735, 822, 1166, 1398, 2435
Tru9I	TTAA	7 cut(s)	47, 321, 735, 822, 1166, 1398, 2435
TscAI	CASTG	3 cut(s)	1189, 1443, 1575
TseFI	GTSAC	3 cut(s)	116, 1856, 2017
TseI	GCWGC	5 cut(s)	259, 1017, 1295, 1373, 2132
Tsp45I	GTSAC	3 cut(s)	116, 1856, 2017
TspGWI	ACGGA	1 cut(s)	1042
TspRI	CASTG	3 cut(s)	1189, 1443, 1575
Van91I	CCANNNNNTGG	1 cut(s)	240
Vha464I	CTTAAG	2 cut(s)	46, 1165
VpaK11BI	GGWCC	4 cut(s)	345, 858, 1029, 2182
XapI	RAATTY	7 cut(s)	23, 146, 294, 547, 1039, 1788, 1943
XceI	RCATGY	4 cut(s)	202, 1102, 1649, 1717
XcmI	CCANNNNNNNNNTGG	4 cut(s)	74, 110, 241, 1696
XhoI	CTCGAG	1 cut(s)	2303
XmnI	GAANNNNTTC	1 cut(s)	1607
XspI	CTAG	5 cut(s)	492, 633, 648, 780, 1883
Zsp2I	ATGCAT	1 cut(s)	610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.