Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005392

Physical Location & Seq

Genomic Coordinates Reverse (-)

38087171 .. 38090377

Gene Structure 3207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g51380.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGGCCCCAAATTTGAGCAATGGTTCTGCTGTTGTTAACGTCGACAATGGCGTAAACCCAAGTCCTTTTAGCCTTGAAGGTTCCAACTTGACGGCCAACGGCCATGTCATCCTCTCAGACGTCCCCAAAAACATAACACTCCGCCCATCACCCCATACCATCAGCAAGTCCACCGCCACCGGAGCTTTTGTTGGCTTCAACGCCGCCGAGGCTAGCAGTCGCCACGTGGTGCCCATCGGCCAGCTGAAGGATATTCGGTTCATGAGCATCTTCCGGTTTAAAGTCTGGTGGACCACTCACTGGGTCGGTTCCAAAGGCAGTGATCTCGAGCAGGAGACGCAAATCGTGATCCTTGAAAACTCTGACGCCGGCAGGCCCTACGTCGTCATCCTCCCTCTCCTTGAAGGTGGCTTCCGCGCATCCATCCAGCCCGGCGTCGAGAATTTCCTTGACGTCTGCTTGGAGAGCGGGTCAACTCAGGTCACAGACAAGGGATTCTCCAGCGTGCTTTATCTTCACGCCGGAGAAGACCCCTTCACGCTGGTGCAGGACGCCGTCAAGGTCGCCAAGGCCCACCTGGGAACGTTCAACTTGTTGGAGGAGAAGACACCACCTGGAATCGTGGACAAGTTTGGTTGGTGCACGTGGGATGCTTTTTACCTCACTGTTCACCCTCGCGGCGTCATTGAAGGCGTGAGGAACCTCGTGGAGGGCGGGTGCCCTCCAGGGCTAGTGTTGTTGGATGATGGATGGCAGTCTATCGGCCACGACTCTGATCCCATCACTAAAGAAGGGATGGGCCAGACCGCGGCCGGTGAGCAAATGCCGTGCAGGCTGCTCAAGTTTCAAGAGAATTACAAGTTCATAGACTATGAGAGTTCCAAGGACCCTAATATTAAAGGCATGGGCGCCTTTGTGAAGGACTTGAAGGACGAGTTCAAGAGCGTTGACTATGTGTACGTGTGGCATGCGCTGTGTGGGTACTGGGGTGGAATCCGGCCACATGTTCCTGGCCTGCCGGAGGCTGTGGTTATTGAGCCGAAACTGTCACCGGGGTTGAAGAACACGATGGAAGATCTGGCCGTGGATAAGATTGTCAACACTGGGGTTGGATTGGTCCCACCGGAAATGGTTAGCCAAATGTATGAAGGGCTCCACTCTCACCTGAAGTCAGTTGGGATCGACGGCGTCAAGGTCGACGTTATCCATTTGTTGGAAATGTTGTGTGAGAACTATGGTGGACGTGTGAACTTGGCTAAAGCATACTACGATGCCCTGACAGCTTCGGTGAGGAAGCATTTCGACGGCAATGGCGTCATTGCTAGCATGGAGCACTGCAACGACTTCATGTTCCTCGGAACCGAAGCCATCACTCTCGGCCGTGTTGGTGACGATTTCTGGTGCACCGATCCCTCCGGTGATCCCAACGGTACCTTTTGGTTGCAAGGGTGTCACATGGTTCATTGTGCTTACAATAGCTTGTGGATGGGCAACTTCATACAGCCGGATTGGGACATGTTCCAGTCCACTCATCCCTGTGCCGCTTTCCATGCTGCCTCTAGAGCAATCTCCGGCGGTCCAATTTATGTCAGTGACACTGTGGGGAAGCACAACTTTGAGTTGCTCAAAACCCTAGTGGTGCCGGACGGCTCTATCCTTCGCTGCGAGTACTATGCTCTCCCTACTCGTGATTGTCTCTTTGAGGATCCTCTCCATGATGGCCGCACCATGCTAAAAATTTGGAATCTCAACAAGTACAATGGAGTTCTTGGGGCATTTAACTGCCAAGGAGGAGGCTGGAGCCGTGAGACTAGGCGAAACCAATGTTTTTCCAAGTATGTAGGAAAGGTGACCTCCAAGGCCAACCCTAAGGACATCGAGTGGAACAGTGGCAAGAATCCAATTTCCATTGAGGGAGTGCAAGTGTTTGCCTTGTACTATCACCAGGCCAAGAAGCTAGTCCTGTCCAAGCCAACCGAGGATGTGGAGTTGTCACTGGAGCCCTTCAACTTTGAACTAATTATCGTTTCTCCGGTGACTACTTTGCCTAGCAAGTCTGTGCAATTTGCTCCAATTGGCCTAGTGAACATGCTCAACACTGGAGGCGCTGTGAAGTCGTTGGTTTACGGTGAGGAGGGGAACTCTGTTCAAATCGGGGTGAAGGGCACCGGAGAGATGAGGGTGTTTGCGTCTGAGAAGCCACTAGGTTGCAGGATTGGTGGAAGCCCTGTCGCTTTTGAGTATGAAGAGAACATGGTGAGAGTTCATGTGCCATGGACCGGTAACTCCAGCTTGTCTATTGTGGAGTACATATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006979 GO:0008150 GO:0008378 GO:0009414 GO:0009415 GO:0009507 GO:0009536 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0016740 GO:0016757 GO:0016758 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0047274 GO:0050896 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00052 map00052

Pfam Domains

Protein Families

Raffinose_syn

Protein Analysis

773

Amino Acids

84.67

Weight (kDa)

5.56

Isoelectric Point (pI)

29.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Raffinose_syn	PF05691	25 - 755	0.0	Raffinose synthase or seed imbibition protein Sip1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40390
fragaria_vesca	FvH4_5g05860 FvH4_6g51380
malus_domestica	MD06G1169800.v1.1 MD14G1175300.v1.1 MD17G1030100.v1.1
prunus_persica	Prupe.3G289900_v2.0.a1
pyrus_communis	pycom06g15120 pycom14g14630 pycom17g02750
rosa_chinensis	RchiOBHm_Chr2g0173061 RchiOBHm_Chr7g0192961
rosa_laevigata	RLG00000004308 RLG00000022154
rosa_multiflora	Rmu_sc0002040.1_g000062 Rmu_sc0011236.1_g000005
rosa_roxburghii	Rroxscaffold_2G00079280 Rroxscaffold_3G00262500
rosa_rugosa	Rorug02G0564900 Rorug07G0006500
rosa_samantha	Rh2AG644700 Rh2BG655500 Rh2CG620600 Rh2DG668800 Rh7AG131800 Rh7BG132600 Rh7DG133700
rosa_wichuraiana	Rw2G052950 Rw7G011240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	123, 456
Acc65I	GGTACC	1 cut(s)	1430
AccB1I	GGYRCC	6 cut(s)	229, 717, 908, 1430, 1639, 2165
AccB7I	CCANNNNNTGG	2 cut(s)	300, 1213
AccBSI	CCGCTC	1 cut(s)	468
AccI	GTMKAC	2 cut(s)	42, 1197
AccII	CGCG	3 cut(s)	417, 678, 809
AclI	AACGTT	1 cut(s)	584
AclWI	GGATC	7 cut(s)	343, 770, 1187, 1403, 1415, 1700, 1713
AcoI	YGGCCR	9 cut(s)	93, 100, 238, 763, 810, 998, 1080, 1378, 1720
AcsI	RAATTY	3 cut(s)	10, 442, 1737
AcuI	CTGAAG	2 cut(s)	266, 1187
AcvI	CACGTG	2 cut(s)	226, 645
AcyI	GRCGYC	9 cut(s)	120, 366, 435, 453, 552, 681, 909, 1188, 1314
AdeI	CACNNNGTG	1 cut(s)	229
AfaI	GTAC	7 cut(s)	959, 983, 1432, 1670, 1757, 1937, 2309
AfiI	CCNNNNNNNGG	7 cut(s)	247, 300, 709, 808, 1021, 1213, 2279
AflIII	ACRYGT	4 cut(s)	960, 1003, 1243, 1515
AgeI	ACCGGT	1 cut(s)	2279
AjiI	CACGTC	1 cut(s)	1244
AjnI	CCWGG	5 cut(s)	576, 613, 724, 1009, 1944
AleI	CACNNNNGTG	1 cut(s)	542
AloI	GAACNNNNNNTCC	2 cut(s)	242, 274
AluBI	AGCT	6 cut(s)	185, 244, 1283, 1479, 1957, 2292
AluI	AGCT	6 cut(s)	185, 244, 1283, 1479, 1957, 2292
Alw21I	GWGCWC	3 cut(s)	644, 1335, 1406
Alw26I	GTCTC	3 cut(s)	329, 1700, 1802
Alw44I	GTGCAC	2 cut(s)	640, 1402
AlwI	GGATC	7 cut(s)	343, 770, 1187, 1403, 1415, 1700, 1713
Ama87I	CYCGRG	1 cut(s)	326
ApaLI	GTGCAC	2 cut(s)	640, 1402
ApeKI	GCWGC	3 cut(s)	835, 1553, 1662
ApoI	RAATTY	3 cut(s)	10, 442, 1737
AsiGI	ACCGGT	1 cut(s)	2279
Asp700I	GAANNNNTTC	1 cut(s)	1298
Asp718I	GGTACC	1 cut(s)	1430
AspLEI	GCGC	4 cut(s)	419, 911, 973, 2108
AspS9I	GGNCC	9 cut(s)	4, 291, 375, 571, 799, 886, 1117, 1577, 2277
AsuC2I	CCSGG	2 cut(s)	432, 1053
AsuNHI	GCTAGC	2 cut(s)	212, 1322
AvaI	CYCGRG	1 cut(s)	326
AvaII	GGWCC	5 cut(s)	291, 886, 1117, 1577, 2277
AxyI	CCTNAGG	1 cut(s)	1869
BaeGI	GKGCMC	5 cut(s)	234, 644, 722, 1406, 2168
BaeI	ACNNNNGTAYC	2 cut(s)	973, 1006
BamHI	GGATCC	1 cut(s)	1705
BanI	GGYRCC	6 cut(s)	229, 717, 908, 1430, 1639, 2165
BanII	GRGCYC	2 cut(s)	1155, 2004
BauI	CACGAG	2 cut(s)	704, 1686
BbrPI	CACGTG	2 cut(s)	226, 645
BbsI	GAAGAC	2 cut(s)	534, 611
Bbv12I	GWGCWC	3 cut(s)	644, 1335, 1406
BbvI	GCAGC	3 cut(s)	822, 1540, 1649
BcgI	CGANNNNNNTGC	4 cut(s)	307, 341, 1655, 1689
BciT130I	CCWGG	5 cut(s)	578, 615, 726, 1011, 1946
BcnI	CCSGG	2 cut(s)	432, 1053
BcoDI	GTCTC	3 cut(s)	329, 1700, 1802
BfoI	RGCGCY	2 cut(s)	912, 2109
BglI	GCCNNNNNGGC	2 cut(s)	209, 832
BglII	AGATCT	1 cut(s)	1075
BisI	GCNGC	8 cut(s)	204, 679, 810, 836, 1542, 1554, 1663, 1723
BlsI	GCNGC	8 cut(s)	205, 680, 811, 837, 1543, 1555, 1664, 1724
BmcAI	AGTACT	1 cut(s)	1670
Bme1390I	CCNGG	7 cut(s)	432, 578, 615, 726, 1011, 1053, 1946
Bme18I	GGWCC	5 cut(s)	291, 886, 1117, 1577, 2277
BmeT110I	CYCGRG	1 cut(s)	326
BmgBI	CACGTC	1 cut(s)	1244
BmgT120I	GGNCC	9 cut(s)	4, 291, 375, 571, 799, 886, 1117, 1577, 2277
BmrFI	CCNGG	7 cut(s)	432, 578, 615, 726, 1011, 1053, 1946
BmrI	ACTGGG	3 cut(s)	310, 994, 1113
BmsI	GCATC	4 cut(s)	276, 428, 640, 1261
BmtI	GCTAGC	2 cut(s)	216, 1326
BmuI	ACTGGG	3 cut(s)	310, 994, 1113
BpiI	GAAGAC	2 cut(s)	534, 611
BplI	GAGNNNNNCTC	2 cut(s)	2126, 2158
BpmI	CTGGAG	6 cut(s)	484, 708, 1819, 2018, 2121, 2272
BpuEI	CTTGAG	1 cut(s)	824
BpuMI	CCSGG	2 cut(s)	432, 1053
BsaAI	YACGTR	3 cut(s)	226, 645, 961
BsaHI	GRCGYC	9 cut(s)	120, 366, 435, 453, 552, 681, 909, 1188, 1314
BsaWI	WCCGGW	7 cut(s)	179, 273, 1123, 1415, 2032, 2168, 2279
Bsc4I	CCNNNNNNNGG	7 cut(s)	247, 300, 709, 808, 1021, 1213, 2279
Bse118I	RCCGGY	3 cut(s)	368, 812, 2279
Bse1I	ACTGG	6 cut(s)	305, 989, 1108, 1522, 2001, 2104
Bse21I	CCTNAGG	1 cut(s)	1869
Bse3DI	GCAATG	3 cut(s)	25, 1315, 1317
BseBI	CCWGG	5 cut(s)	578, 615, 726, 1011, 1946
BseLI	CCNNNNNNNGG	7 cut(s)	247, 300, 709, 808, 1021, 1213, 2279
BseMI	GCAATG	3 cut(s)	25, 1315, 1317
BseMII	CTCAG	3 cut(s)	129, 491, 2184
BseNI	ACTGG	6 cut(s)	305, 989, 1108, 1522, 2001, 2104
BseRI	GAGGAG	3 cut(s)	614, 1806, 2147
BseSI	GKGCMC	5 cut(s)	234, 644, 722, 1406, 2168
BseX3I	CGGCCG	2 cut(s)	810, 1378
BseXI	GCAGC	3 cut(s)	822, 1540, 1649
BsgI	GTGCAG	2 cut(s)	566, 850
Bsh1236I	CGCG	3 cut(s)	417, 678, 809
Bsh1285I	CGRYCG	2 cut(s)	813, 1381
BshNI	GGYRCC	6 cut(s)	229, 717, 908, 1430, 1639, 2165
BshTI	ACCGGT	1 cut(s)	2279
BsiEI	CGRYCG	2 cut(s)	813, 1381
BsiHKAI	GWGCWC	3 cut(s)	644, 1335, 1406
BsiHKCI	CYCGRG	1 cut(s)	326
BslFI	GGGAC	3 cut(s)	107, 1103, 1526
BslI	CCNNNNNNNGG	7 cut(s)	247, 300, 709, 808, 1021, 1213, 2279
BsmAI	GTCTC	3 cut(s)	329, 1700, 1802
BsmBI	CGTCTC	1 cut(s)	329
BsmFI	GGGAC	3 cut(s)	107, 1103, 1526
BsoBI	CYCGRG	1 cut(s)	326
Bsp1286I	GDGCHC	8 cut(s)	234, 644, 722, 1155, 1335, 1406, 2004, 2168
Bsp143I	GATC	8 cut(s)	322, 348, 775, 1075, 1179, 1408, 1420, 1705
Bsp19I	CCATGG	1 cut(s)	2273
BspCNI	CTCAG	3 cut(s)	128, 490, 2185
BspFNI	CGCG	3 cut(s)	417, 678, 809
BspHI	TCATGA	1 cut(s)	261
BspOI	GCTAGC	2 cut(s)	216, 1326
BspPI	GGATC	7 cut(s)	343, 770, 1187, 1403, 1415, 1700, 1713
BspT107I	GGYRCC	6 cut(s)	229, 717, 908, 1430, 1639, 2165
BsrBI	CCGCTC	1 cut(s)	468
BsrDI	GCAATG	3 cut(s)	25, 1315, 1317
BsrFI	RCCGGY	3 cut(s)	368, 812, 2279
BsrI	ACTGG	6 cut(s)	305, 989, 1108, 1522, 2001, 2104
BssAI	RCCGGY	3 cut(s)	368, 812, 2279
BssMI	GATC	8 cut(s)	322, 348, 775, 1075, 1179, 1408, 1420, 1705
BssNI	GRCGYC	9 cut(s)	120, 366, 435, 453, 552, 681, 909, 1188, 1314
BssSI	CACGAG	2 cut(s)	704, 1686
BssT1I	CCWWGG	5 cut(s)	567, 882, 1786, 1857, 2273
Bst2BI	CACGAG	2 cut(s)	704, 1686
Bst2UI	CCWGG	5 cut(s)	578, 615, 726, 1011, 1946
Bst4CI	ACNGT	6 cut(s)	667, 1047, 1430, 1600, 1889, 2129
Bst6I	CTCTTC	1 cut(s)	2241
BstACI	GRCGYC	9 cut(s)	120, 366, 435, 453, 552, 681, 909, 1188, 1314
BstBAI	YACGTR	3 cut(s)	226, 645, 961
BstC8I	GCNNGC	9 cut(s)	214, 242, 370, 374, 506, 833, 969, 1016, 1324
BstDEI	CTNAG	4 cut(s)	115, 477, 1869, 2193
BstDSI	CCRYGG	3 cut(s)	807, 1083, 2273
BstEII	GGTNACC	1 cut(s)	1849
BstENI	CCTNNNNNAGG	2 cut(s)	707, 1019
BstFNI	CGCG	3 cut(s)	417, 678, 809
BstH2I	RGCGCY	2 cut(s)	912, 2109
BstHHI	GCGC	4 cut(s)	419, 911, 973, 2108
BstKTI	GATC	8 cut(s)	325, 351, 778, 1078, 1182, 1411, 1423, 1708
BstMAI	GTCTC	3 cut(s)	329, 1700, 1802
BstMBI	GATC	8 cut(s)	322, 348, 775, 1075, 1179, 1408, 1420, 1705
BstMCI	CGRYCG	2 cut(s)	813, 1381
BstMWI	GCNNNNNNNGC	8 cut(s)	182, 209, 337, 465, 832, 1280, 1550, 1562
BstNI	CCWGG	5 cut(s)	578, 615, 726, 1011, 1946
BstNSI	RCATGY	4 cut(s)	971, 1007, 1519, 2092
BstPI	GGTNACC	1 cut(s)	1849
BstSCI	CCNGG	7 cut(s)	430, 576, 613, 724, 1009, 1051, 1944
BstSLI	GKGCMC	5 cut(s)	234, 644, 722, 1406, 2168
BstUI	CGCG	3 cut(s)	417, 678, 809
BstV1I	GCAGC	3 cut(s)	822, 1540, 1649
BstV2I	GAAGAC	2 cut(s)	534, 611
BstX2I	RGATCY	2 cut(s)	1075, 1705
BstYI	RGATCY	2 cut(s)	1075, 1705
BstZI	CGGCCG	2 cut(s)	810, 1378
Bsu36I	CCTNAGG	1 cut(s)	1869
BtgI	CCRYGG	3 cut(s)	807, 1083, 2273
BtrI	CACGTC	1 cut(s)	1244
BtsI	GCAGTG	2 cut(s)	325, 1333
Cac8I	GCNNGC	9 cut(s)	214, 242, 370, 374, 506, 833, 969, 1016, 1324
CciI	TCATGA	1 cut(s)	261
CfoI	GCGC	4 cut(s)	419, 911, 973, 2108
Cfr10I	RCCGGY	3 cut(s)	368, 812, 2279
Cfr13I	GGNCC	9 cut(s)	4, 291, 375, 571, 799, 886, 1117, 1577, 2277
Cfr42I	CCGCGG	1 cut(s)	810
CseI	GACGC	8 cut(s)	346, 374, 424, 560, 670, 1177, 1303, 2178
Csp6I	GTAC	7 cut(s)	958, 982, 1431, 1669, 1756, 1936, 2308
CspAI	ACCGGT	1 cut(s)	2279
CviQI	GTAC	7 cut(s)	958, 982, 1431, 1669, 1756, 1936, 2308
DdeI	CTNAG	4 cut(s)	115, 477, 1869, 2193
DinI	GGCGCC	1 cut(s)	910
DpnI	GATC	8 cut(s)	324, 350, 777, 1077, 1181, 1410, 1422, 1707
DpnII	GATC	8 cut(s)	322, 348, 775, 1075, 1179, 1408, 1420, 1705
DraI	TTTAAA	1 cut(s)	280
DraIII	CACNNNGTG	1 cut(s)	229
EaeI	YGGCCR	9 cut(s)	93, 100, 238, 763, 810, 998, 1080, 1378, 1720
EagI	CGGCCG	2 cut(s)	810, 1378
Eam1104I	CTCTTC	1 cut(s)	2241
EarI	CTCTTC	1 cut(s)	2241
EciI	GGCGGA	1 cut(s)	131
EclXI	CGGCCG	2 cut(s)	810, 1378
Eco130I	CCWWGG	5 cut(s)	567, 882, 1786, 1857, 2273
Eco24I	GRGCYC	2 cut(s)	1155, 2004
Eco47I	GGWCC	5 cut(s)	291, 886, 1117, 1577, 2277
Eco52I	CGGCCG	2 cut(s)	810, 1378
Eco57I	CTGAAG	2 cut(s)	266, 1187
Eco72I	CACGTG	2 cut(s)	226, 645
Eco81I	CCTNAGG	1 cut(s)	1869
Eco88I	CYCGRG	1 cut(s)	326
Eco91I	GGTNACC	1 cut(s)	1849
EcoNI	CCTNNNNNAGG	2 cut(s)	707, 1019
EcoO109I	RGGNCCY	2 cut(s)	375, 886
EcoO65I	GGTNACC	1 cut(s)	1849
EcoRII	CCWGG	5 cut(s)	576, 613, 724, 1009, 1944
EcoT14I	CCWWGG	5 cut(s)	567, 882, 1786, 1857, 2273
EcoT38I	GRGCYC	2 cut(s)	1155, 2004
EgeI	GGCGCC	1 cut(s)	910
EheI	GGCGCC	1 cut(s)	910
ErhI	CCWWGG	5 cut(s)	567, 882, 1786, 1857, 2273
Esp3I	CGTCTC	1 cut(s)	329
FalI	AAGNNNNNCTT	2 cut(s)	1598, 1630
FaqI	GGGAC	3 cut(s)	107, 1103, 1526
FauI	CCCGC	2 cut(s)	461, 707
FblI	GTMKAC	2 cut(s)	42, 1197
Fnu4HI	GCNGC	8 cut(s)	204, 679, 810, 836, 1542, 1554, 1663, 1723
FriOI	GRGCYC	2 cut(s)	1155, 2004
Fsp4HI	GCNGC	8 cut(s)	204, 679, 810, 836, 1542, 1554, 1663, 1723
GlaI	GCGC	4 cut(s)	418, 910, 972, 2107
GluI	GCNGC	8 cut(s)	204, 679, 810, 836, 1542, 1554, 1663, 1723
GsuI	CTGGAG	6 cut(s)	484, 708, 1819, 2018, 2121, 2272
HaeII	RGCGCY	2 cut(s)	912, 2109
HgaI	GACGC	8 cut(s)	346, 374, 424, 560, 670, 1177, 1303, 2178
HhaI	GCGC	4 cut(s)	419, 911, 973, 2108
Hin1I	GRCGYC	9 cut(s)	120, 366, 435, 453, 552, 681, 909, 1188, 1314
Hin6I	GCGC	4 cut(s)	417, 909, 971, 2106
HinP1I	GCGC	4 cut(s)	417, 909, 971, 2106
HincII	GTYRAC	6 cut(s)	37, 43, 474, 949, 1099, 1198
HindII	GTYRAC	6 cut(s)	37, 43, 474, 949, 1099, 1198
HinfI	GANTC	6 cut(s)	495, 618, 770, 993, 1744, 1897
HpaI	GTTAAC	1 cut(s)	37
Hpy188I	TCNGA	5 cut(s)	118, 364, 775, 1358, 2194
Hpy188III	TCNNGA	8 cut(s)	262, 326, 346, 439, 848, 940, 1560, 1688
Hpy99I	CGWCG	6 cut(s)	44, 386, 440, 1187, 1202, 1307
HpyCH4III	ACNGT	6 cut(s)	667, 1047, 1430, 1600, 1889, 2129
HpyCH4V	TGCA	9 cut(s)	547, 642, 831, 1338, 1404, 1444, 1921, 2062, 2211
HpyF10VI	GCNNNNNNNGC	8 cut(s)	182, 209, 337, 465, 832, 1280, 1550, 1562
HpyF3I	CTNAG	4 cut(s)	115, 477, 1869, 2193
Hsp92I	GRCGYC	9 cut(s)	120, 366, 435, 453, 552, 681, 909, 1188, 1314
HspAI	GCGC	4 cut(s)	417, 909, 971, 2106
KasI	GGCGCC	1 cut(s)	908
KpnI	GGTACC	1 cut(s)	1434
KroI	GCCGGC	1 cut(s)	368
KroNI	GCCGGC	1 cut(s)	370
KspAI	GTTAAC	1 cut(s)	37
KspI	CCGCGG	1 cut(s)	810
Kzo9I	GATC	8 cut(s)	322, 348, 775, 1075, 1179, 1408, 1420, 1705
LmnI	GCTCC	6 cut(s)	182, 1158, 1330, 1800, 1999, 2074
Lsp1109I	GCAGC	3 cut(s)	822, 1540, 1649
LweI	GCATC	4 cut(s)	276, 428, 640, 1261
MaeIII	GTNAC	9 cut(s)	481, 1047, 1388, 1451, 1592, 1849, 1992, 2035, 2282
MalI	GATC	8 cut(s)	324, 350, 777, 1077, 1181, 1410, 1422, 1707
MbiI	CCGCTC	1 cut(s)	468
MboI	GATC	8 cut(s)	322, 348, 775, 1075, 1179, 1408, 1420, 1705
MboII	GAAGA	7 cut(s)	262, 506, 539, 616, 1072, 1085, 2258
MfeI	CAATTG	1 cut(s)	2073
MflI	RGATCY	2 cut(s)	1075, 1705
MhlI	GDGCHC	8 cut(s)	234, 644, 722, 1155, 1335, 1406, 2004, 2168
MluCI	AATT	9 cut(s)	10, 442, 853, 1581, 1737, 1902, 2019, 2063, 2073
Mly113I	GGCGCC	1 cut(s)	909
MlyI	GAGTC	1 cut(s)	764
MmeI	TCCRAC	5 cut(s)	108, 576, 720, 1090, 1194
MroNI	GCCGGC	1 cut(s)	368
MroXI	GAANNNNTTC	1 cut(s)	1298
MseI	TTAA	4 cut(s)	36, 279, 897, 1779
MslI	CAYNNNNRTG	2 cut(s)	542, 1536
MspA1I	CMGCKG	2 cut(s)	244, 809
MspR9I	CCNGG	7 cut(s)	432, 578, 615, 726, 1011, 1053, 1946
MunI	CAATTG	1 cut(s)	2073
MvaI	CCWGG	5 cut(s)	578, 615, 726, 1011, 1946
MvnI	CGCG	3 cut(s)	417, 678, 809
MwoI	GCNNNNNNNGC	8 cut(s)	182, 209, 337, 465, 832, 1280, 1550, 1562
NaeI	GCCGGC	1 cut(s)	370
NarI	GGCGCC	1 cut(s)	909
NciI	CCSGG	2 cut(s)	432, 1053
NcoI	CCATGG	1 cut(s)	2273
NdeII	GATC	8 cut(s)	322, 348, 775, 1075, 1179, 1408, 1420, 1705
NgoMIV	GCCGGC	1 cut(s)	368
NheI	GCTAGC	2 cut(s)	212, 1322
NmeAIII	GCCGAG	2 cut(s)	232, 1356
NmuCI	GTSAC	8 cut(s)	481, 1047, 1388, 1451, 1592, 1849, 1992, 2035
NspI	RCATGY	4 cut(s)	971, 1007, 1519, 2092
OliI	CACNNNNGTG	1 cut(s)	542
PaeI	GCATGC	1 cut(s)	971
PaeR7I	CTCGAG	1 cut(s)	326
PagI	TCATGA	1 cut(s)	261
PciI	ACATGT	2 cut(s)	1003, 1515
PcsI	WCGNNNNNNNCGW	2 cut(s)	48, 1311
PdiI	GCCGGC	1 cut(s)	370
PdmI	GAANNNNTTC	1 cut(s)	1298
PfeI	GAWTC	5 cut(s)	495, 618, 993, 1744, 1897
PflFI	GACNNNGTC	2 cut(s)	554, 1187
PflMI	CCANNNNNTGG	2 cut(s)	300, 1213
PinAI	ACCGGT	1 cut(s)	2279
PkrI	GCNGC	8 cut(s)	205, 680, 811, 837, 1543, 1555, 1664, 1724
PleI	GAGTC	1 cut(s)	764
PluTI	GGCGCC	1 cut(s)	912
PmaCI	CACGTG	2 cut(s)	226, 645
PmlI	CACGTG	2 cut(s)	226, 645
PpsI	GAGTC	1 cut(s)	764
Ppu21I	YACGTR	3 cut(s)	226, 645, 961
PpuMI	RGGWCCY	1 cut(s)	886
PscI	ACATGT	2 cut(s)	1003, 1515
Psp1406I	AACGTT	1 cut(s)	584
Psp5II	RGGWCCY	1 cut(s)	886
Psp6I	CCWGG	5 cut(s)	576, 613, 724, 1009, 1944
PspCI	CACGTG	2 cut(s)	226, 645
PspEI	GGTNACC	1 cut(s)	1849
PspGI	CCWGG	5 cut(s)	576, 613, 724, 1009, 1944
PspPI	GGNCC	9 cut(s)	4, 291, 375, 571, 799, 886, 1117, 1577, 2277
PspPPI	RGGWCCY	1 cut(s)	886
PsuI	RGATCY	2 cut(s)	1075, 1705
PsyI	GACNNNGTC	2 cut(s)	554, 1187
PvuII	CAGCTG	1 cut(s)	244
RsaI	GTAC	7 cut(s)	959, 983, 1432, 1670, 1757, 1937, 2309
RsaNI	GTAC	7 cut(s)	958, 982, 1431, 1669, 1756, 1936, 2308
RseI	CAYNNNNRTG	2 cut(s)	542, 1536
SacII	CCGCGG	1 cut(s)	810
SalI	GTCGAC	2 cut(s)	41, 1196
SaqAI	TTAA	4 cut(s)	36, 279, 897, 1779
SatI	GCNGC	8 cut(s)	204, 679, 810, 836, 1542, 1554, 1663, 1723
Sau3AI	GATC	8 cut(s)	322, 348, 775, 1075, 1179, 1408, 1420, 1705
Sau96I	GGNCC	9 cut(s)	4, 291, 375, 571, 799, 886, 1117, 1577, 2277
ScaI	AGTACT	1 cut(s)	1670
SchI	GAGTC	1 cut(s)	764
ScrFI	CCNGG	7 cut(s)	432, 578, 615, 726, 1011, 1053, 1946
SduI	GDGCHC	8 cut(s)	234, 644, 722, 1155, 1335, 1406, 2004, 2168
SfaNI	GCATC	4 cut(s)	276, 428, 640, 1261
SfoI	GGCGCC	1 cut(s)	910
Sfr274I	CTCGAG	1 cut(s)	326
Sfr303I	CCGCGG	1 cut(s)	810
SgrBI	CCGCGG	1 cut(s)	810
SinI	GGWCC	5 cut(s)	291, 886, 1117, 1577, 2277
SlaI	CTCGAG	1 cut(s)	326
SmiMI	CAYNNNNRTG	2 cut(s)	542, 1536
SmlI	CTYRAG	2 cut(s)	326, 839
SmoI	CTYRAG	2 cut(s)	326, 839
SphI	GCATGC	1 cut(s)	971
Sse9I	AATT	9 cut(s)	10, 442, 853, 1581, 1737, 1902, 2019, 2063, 2073
SspDI	GGCGCC	1 cut(s)	908
SspI	AATATT	1 cut(s)	895
StyD4I	CCNGG	7 cut(s)	430, 576, 613, 724, 1009, 1051, 1944
StyI	CCWWGG	5 cut(s)	567, 882, 1786, 1857, 2273
TaaI	ACNGT	6 cut(s)	667, 1047, 1430, 1600, 1889, 2129
TaqI	TCGA	7 cut(s)	42, 327, 438, 1182, 1197, 1302, 1878
TasI	AATT	9 cut(s)	10, 442, 853, 1581, 1737, 1902, 2019, 2063, 2073
TatI	WGTACW	4 cut(s)	1668, 1755, 1935, 2307
TauI	GCSGC	5 cut(s)	206, 681, 812, 1544, 1725
TfiI	GAWTC	5 cut(s)	495, 618, 993, 1744, 1897
Tru1I	TTAA	4 cut(s)	36, 279, 897, 1779
Tru9I	TTAA	4 cut(s)	36, 279, 897, 1779
TseFI	GTSAC	8 cut(s)	481, 1047, 1388, 1451, 1592, 1849, 1992, 2035
TseI	GCWGC	3 cut(s)	835, 1553, 1662
Tsp45I	GTSAC	8 cut(s)	481, 1047, 1388, 1451, 1592, 1849, 1992, 2035
TspDTI	ATGAA	8 cut(s)	250, 853, 1161, 1336, 1451, 1486, 2255, 2259
Tth111I	GACNNNGTC	2 cut(s)	554, 1187
Van91I	CCANNNNNTGG	2 cut(s)	300, 1213
VneI	GTGCAC	2 cut(s)	640, 1402
VpaK11BI	GGWCC	5 cut(s)	291, 886, 1117, 1577, 2277
XagI	CCTNNNNNAGG	2 cut(s)	707, 1019
XapI	RAATTY	3 cut(s)	10, 442, 1737
XbaI	TCTAGA	1 cut(s)	1559
XceI	RCATGY	4 cut(s)	971, 1007, 1519, 2092
XcmI	CCANNNNNNNNNTGG	1 cut(s)	574
XhoI	CTCGAG	1 cut(s)	326
XmiI	GTMKAC	2 cut(s)	42, 1197
XmnI	GAANNNNTTC	1 cut(s)	1298
ZraI	GACGTC	2 cut(s)	121, 454
ZrmI	AGTACT	1 cut(s)	1670

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.