Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0005392

Physical Location & Seq

Genomic Coordinates Forward (+)

26034828 .. 26038497

Gene Structure 3670 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G289900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGGCTCCAAGTTTGACTAAAGCTGCCAACGGCGACACTAACCTCGCCGACGGCTCTAAGCCCTCGTCATGTCCTTTCACGCTCGAGAAGTCCAACTTCAAGGCAAACGGCCATGTCATTCTCTCCGACGTGCCGGAAAACATAACACTCATCCCATCACCCTACAGCACCGCCGGCTGCTTCGTGGGCTTTGATGTCGCCGAGCCCAACAGCCGCCACGTGGTCCCCGTTGGCCAACTGAAGGACATCCGCTTCATGAGCATCTTCCGGTTCAAAGTCTGGTGGACTACCCACTGGGTCGGATCCAACGGCCGGGACCTAGAGAACGAGACCCAGATCGTCATCCTCGAAAGCTCCGACGCCGGTAGGCCCTACGTCGTCGTTCTCCCCCTTCTAGAAGGCTCCTTCCGCGCCTGCATCCAGCCCGGCAACTCCGACTTTCTCGACATCTGCGTCGAGAGTGGGTCCACCCGAGAAGTCTCCAATTCCTTCCAGAGCGTGCTTTATTTGCAAGCCGGTGATGATCCGTTTGCCCTAGTCAAAGAGGCGGTCAAAGTCGCGAGGGACCATTTGGGAACTTTCCAACTTTTGGAGGACAAGACCCCACCTGGGATCGTGGACAAGTTCGGTTGGTGCACCTGGGACGCATTCTATCTTACTGTACACCCTCACGGCGTCATAGACGGCGTGAGGAAGCTGGTGGAAGGTGGGTGTCCACCCGGGCTCGTGTTGCTCGACGATGGGTGGCAGTCCATTGGTCACGATTCTGATCCCATCACCAAAGAAGGCATGAACCAAGCGGTTGCCGGCGAGCAAATGCCGTGCAGGCTCCTGAAGTTTGAAGAAAATTACAAGTTCAGGGACTACGTGAGTCCCAATGGGGGTGCCTCTGGTAAAGGCATGGGTGCCTTTATCAAGGACCTCAAGGAGGAGTTCAAGAGCGTTGATTACGTGTACGTGTGGCATGCGCTGTGTGGGTACTGGGGCGGAGTCAGGCCCAATGTTCCCGGAATGCCCGACGCTGTGGTGGTGGAGCCCACATTGTCTCCGGGCCTACTGAAGACAATGGAAGATCTGGCCGTGGATAAGATCGTGGCCACTGGTGTGGGGCTGGTCCCACCCGAGGTCGTTGATCAGATGTACGAAGGGCTCCACTCGCACTTGAAGTCCGTCGGGATCGACGGCGTCAAGGTGGACGTAATCCACTTGCTGGAAATGCTTTGTGAGAATTATGGCGGGAGGGTGAAGCTGGCGAAGGCATATTTCGATGCTCTTACATCTTCAGTGAGGAAGCACTTCAATGGCAACGGGGTCATTGCCAGCATGGAGCACTGCAACGACTTCATGTTCCTTGGAACCGAAGCCATCACTCTTGGCCGTGTTGGTGATGATTTCTGGTGCACCGATCCATCTGGTGACCCCAACGGTACGTTTTGGCTTCAAGGGTGTCACATGGTGCACTGTGCTTACAACAGCTTGTGGATGGGCAATTTTATACACCCGGATTGGGATATGTTCCAATCGACCCATCCCTGCGCTGCCTTCCACGCCGCCTCTAGGGCCATCTCCGGTGGCCCTATTTATGTTAGCGATGCCGTTGGAAAGCACAACTTTGATGTGCTTAGGACCCTGGTGTTGCCCGATGGCTCAATTCTCCGGTGCGAGTACTATGCACTACCAACTCGTGATTGTCTCTTTGAGGACCCTCTCCATGATGGCAACACCATGCTCAAAATATGGAACCTCAATAAGTTCAGTGGAGTTCTTGGGGCATTCAACTGCCAAGGAGGAGGCTGGAGCCGCGAAACCCGGCGCAACCAATGTGCTGCTAAATTCTCCCACAGGCTGACCGCCAAGCTCAACCCGAAGGACATCCAGTGGAAGAGTGGCAAGAGCCCAATTTCCATTGAAGGAGTGCAAGAGTTTGCCTTGTACTATCACCAAGCCAAGAAGCTTGTCCTGTCCAAGCCCAACGAGGATGTTGAACTGTCACTGGACCCCTTCAACTTTGAGCTCATTTTTGTCTCTCCGGTGACTGTTTTGGGTGCTAAAAAGTCTGTCCAATTTGCCCCCATTGGCTTAGTGAACATGCTCAACACCGGCGGTGCCATCCAGTCCTTTGTTTTCAATGAGGACGAGAGCTCTGTTCAAGTTGGAGTTAAGGGCACTGGAGAGCTCAGGGTCTTTGCTTCTGAGAAACCAACAAGTTGCAGGATTGAGGGCAACGACGTTGCTTTTGAGTACGAGCAGAGCATGGTCATAATCCAAGTGCCATGGCCTGCTTCTTCCACCTTATCTACTGTGGAGTACAAATTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006979 GO:0008150 GO:0008378 GO:0009414 GO:0009415 GO:0009507 GO:0009536 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0016740 GO:0016757 GO:0016758 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0047274 GO:0050896 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00052 map00052

Pfam Domains

Protein Families

Raffinose_syn

Protein Analysis

773

Amino Acids

84.86

Weight (kDa)

5.39

Isoelectric Point (pI)

31.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40390
fragaria_vesca	FvH4_5g05860 FvH4_6g51380
malus_domestica	MD06G1169800.v1.1 MD14G1175300.v1.1 MD17G1030100.v1.1
prunus_persica	Prupe.3G289900_v2.0.a1
pyrus_communis	pycom06g15120 pycom14g14630 pycom17g02750
rosa_chinensis	RchiOBHm_Chr2g0173061 RchiOBHm_Chr7g0192961
rosa_laevigata	RLG00000004308 RLG00000022154
rosa_multiflora	Rmu_sc0002040.1_g000062 Rmu_sc0011236.1_g000005
rosa_roxburghii	Rroxscaffold_2G00079280 Rroxscaffold_3G00262500
rosa_rugosa	Rorug02G0564900 Rorug07G0006500
rosa_samantha	Rh2AG644700 Rh2BG655500 Rh2CG620600 Rh2DG668800 Rh7AG131800 Rh7BG132600 Rh7DG133700
rosa_wichuraiana	Rw2G052950 Rw7G011240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	452
AccB1I	GGYRCC	3 cut(s)	884, 905, 2105
AccB7I	CCANNNNNTGG	2 cut(s)	589, 1210
AccII	CGCG	3 cut(s)	411, 560, 1803
AclWI	GGATC	7 cut(s)	297, 310, 518, 620, 764, 1184, 1400
AcoI	YGGCCR	6 cut(s)	109, 232, 310, 1077, 1095, 1375
AcsI	RAATTY	2 cut(s)	1832, 2312
AcuI	CTGAAG	4 cut(s)	260, 854, 1079, 1266
AcvI	CACGTG	1 cut(s)	220
AcyI	GRCGYC	3 cut(s)	360, 675, 1185
AdeI	CACNNNGTG	1 cut(s)	1456
AfaI	GTAC	9 cut(s)	663, 956, 980, 1142, 1429, 1667, 1934, 2243, 2309
AflIII	ACRYGT	2 cut(s)	951, 957
AjiI	CACGTC	1 cut(s)	130
AjnI	CCWGG	3 cut(s)	607, 638, 1629
AleI	CACNNNNGTG	1 cut(s)	1103
Alw21I	GWGCWC	7 cut(s)	638, 1332, 1403, 1461, 2016, 2144, 2178
Alw26I	GTCTC	5 cut(s)	323, 484, 1050, 1697, 2029
Alw44I	GTGCAC	3 cut(s)	634, 1399, 1457
AlwI	GGATC	7 cut(s)	297, 310, 518, 620, 764, 1184, 1400
Ama87I	CYCGRG	4 cut(s)	83, 471, 719, 1121
ApaLI	GTGCAC	3 cut(s)	634, 1399, 1457
ApeKI	GCWGC	4 cut(s)	23, 177, 1538, 1826
ApoI	RAATTY	2 cut(s)	1832, 2312
ArsI	GACNNNNNNTTYG	4 cut(s)	534, 566, 2219, 2251
Asp700I	GAANNNNTTC	1 cut(s)	1295
AspLEI	GCGC	4 cut(s)	413, 970, 1538, 1815
AsuC2I	CCSGG	8 cut(s)	314, 426, 720, 721, 1008, 1050, 1502, 1810
AsuHPI	GGTGA	8 cut(s)	150, 530, 769, 1255, 1397, 1427, 1931, 2044
AvaI	CYCGRG	4 cut(s)	83, 471, 719, 1121
AvaII	GGWCC	9 cut(s)	223, 316, 465, 565, 919, 1114, 1626, 1702, 1996
BaeGI	GKGCMC	4 cut(s)	638, 1403, 1461, 2168
BalI	TGGCCA	2 cut(s)	234, 1097
BamHI	GGATCC	1 cut(s)	302
BanI	GGYRCC	3 cut(s)	884, 905, 2105
BanII	GRGCYC	8 cut(s)	207, 726, 1038, 1152, 1898, 2016, 2144, 2178
BauI	CACGAG	2 cut(s)	725, 1683
BbrPI	CACGTG	1 cut(s)	220
BbsI	GAAGAC	1 cut(s)	1067
Bbv12I	GWGCWC	7 cut(s)	638, 1332, 1403, 1461, 2016, 2144, 2178
BbvI	GCAGC	4 cut(s)	10, 164, 1525, 1813
BcgI	CGANNNNNNTGC	2 cut(s)	1652, 1686
BciT130I	CCWGG	3 cut(s)	609, 640, 1631
BclI	TGATCA	1 cut(s)	1132
BcnI	CCSGG	8 cut(s)	314, 426, 720, 721, 1008, 1050, 1502, 1810
BcoDI	GTCTC	5 cut(s)	323, 484, 1050, 1697, 2029
BfaI	CTAG	4 cut(s)	320, 395, 536, 1557
BfmI	CTRYAG	1 cut(s)	163
BglI	GCCNNNNNGGC	2 cut(s)	826, 1559
BglII	AGATCT	1 cut(s)	1072
BisI	GCNGC	7 cut(s)	24, 178, 214, 1539, 1551, 1801, 1827
BlsI	GCNGC	7 cut(s)	25, 179, 215, 1540, 1552, 1802, 1828
BmcAI	AGTACT	1 cut(s)	1667
Bme18I	GGWCC	9 cut(s)	223, 316, 465, 565, 919, 1114, 1626, 1702, 1996
BmeT110I	CYCGRG	4 cut(s)	83, 471, 719, 1121
BmgBI	CACGTC	1 cut(s)	130
BmrI	ACTGGG	2 cut(s)	304, 991
BmsI	GCATC	4 cut(s)	270, 426, 1258, 1582
BmuI	ACTGGG	2 cut(s)	304, 991
BpiI	GAAGAC	1 cut(s)	1067
BpmI	CTGGAG	2 cut(s)	1816, 2190
Bpu10I	CCTNAGC	2 cut(s)	1622, 2177
BpuEI	CTTGAG	1 cut(s)	908
BpuMI	CCSGG	8 cut(s)	314, 426, 720, 721, 1008, 1050, 1502, 1810
BsaAI	YACGTR	4 cut(s)	220, 868, 952, 958
BsaBI	GATNNNNATC	2 cut(s)	341, 768
BsaHI	GRCGYC	3 cut(s)	360, 675, 1185
BsaI	GGTCTC	1 cut(s)	323
BsaJI	CCNNGG	9 cut(s)	608, 639, 719, 1080, 1122, 1351, 1629, 1783, 2273
BsaWI	WCCGGW	4 cut(s)	267, 1568, 1656, 2029
BsaXI	ACNNNNNCTCC	2 cut(s)	1030, 1060
Bse118I	RCCGGY	5 cut(s)	173, 362, 515, 806, 2099
Bse1I	ACTGG	7 cut(s)	299, 986, 1105, 1876, 1998, 2113, 2173
Bse3DI	GCAATG	1 cut(s)	1314
Bse8I	GATNNNNATC	2 cut(s)	341, 768
BseBI	CCWGG	3 cut(s)	609, 640, 1631
BseDI	CCNNGG	9 cut(s)	608, 639, 719, 1080, 1122, 1351, 1629, 1783, 2273
BseGI	GGATG	9 cut(s)	150, 246, 342, 417, 1488, 1528, 1872, 1984, 2109
BseJI	GATNNNNATC	2 cut(s)	341, 768
BseMI	GCAATG	1 cut(s)	1314
BseMII	CTCAG	2 cut(s)	2184, 2191
BseNI	ACTGG	7 cut(s)	299, 986, 1105, 1876, 1998, 2113, 2173
BseRI	GAGGAG	2 cut(s)	944, 1803
BseSI	GKGCMC	4 cut(s)	638, 1403, 1461, 2168
BseX3I	CGGCCG	1 cut(s)	310
BseXI	GCAGC	4 cut(s)	10, 164, 1525, 1813
BsgI	GTGCAG	1 cut(s)	844
Bsh1236I	CGCG	3 cut(s)	411, 560, 1803
Bsh1285I	CGRYCG	1 cut(s)	313
BshNI	GGYRCC	3 cut(s)	884, 905, 2105
BsiEI	CGRYCG	1 cut(s)	313
BsiHKAI	GWGCWC	7 cut(s)	638, 1332, 1403, 1461, 2016, 2144, 2178
BsiHKCI	CYCGRG	4 cut(s)	83, 471, 719, 1121
BslFI	GGGAC	7 cut(s)	209, 329, 578, 656, 858, 875, 1100
BsmAI	GTCTC	5 cut(s)	323, 484, 1050, 1697, 2029
BsmFI	GGGAC	7 cut(s)	209, 329, 578, 656, 858, 875, 1100
BsmI	GAATGC	3 cut(s)	647, 1017, 1772
Bso31I	GGTCTC	1 cut(s)	323
BsoBI	CYCGRG	4 cut(s)	83, 471, 719, 1121
Bsp1407I	TGTACA	1 cut(s)	661
Bsp19I	CCATGG	1 cut(s)	2273
Bsp68I	TCGCGA	1 cut(s)	560
BspCNI	CTCAG	2 cut(s)	2185, 2190
BspFNI	CGCG	3 cut(s)	411, 560, 1803
BspHI	TCATGA	1 cut(s)	255
BspPI	GGATC	7 cut(s)	297, 310, 518, 620, 764, 1184, 1400
BspT107I	GGYRCC	3 cut(s)	884, 905, 2105
BspTNI	GGTCTC	1 cut(s)	323
BsrDI	GCAATG	1 cut(s)	1314
BsrFI	RCCGGY	5 cut(s)	173, 362, 515, 806, 2099
BsrGI	TGTACA	1 cut(s)	661
BsrI	ACTGG	7 cut(s)	299, 986, 1105, 1876, 1998, 2113, 2173
BssAI	RCCGGY	5 cut(s)	173, 362, 515, 806, 2099
BssECI	CCNNGG	9 cut(s)	608, 639, 719, 1080, 1122, 1351, 1629, 1783, 2273
BssNI	GRCGYC	3 cut(s)	360, 675, 1185
BssSI	CACGAG	2 cut(s)	725, 1683
BssT1I	CCWWGG	3 cut(s)	1351, 1783, 2273
Bst2BI	CACGAG	2 cut(s)	725, 1683
Bst2UI	CCWGG	3 cut(s)	609, 640, 1631
Bst4CI	ACNGT	6 cut(s)	661, 1427, 1463, 1989, 2038, 2302
Bst6I	CTCTTC	1 cut(s)	1877
BstACI	GRCGYC	3 cut(s)	360, 675, 1185
BstAUI	TGTACA	1 cut(s)	661
BstBAI	YACGTR	4 cut(s)	220, 868, 952, 958
BstDEI	CTNAG	5 cut(s)	57, 1622, 2080, 2177, 2193
BstDSI	CCRYGG	2 cut(s)	1080, 2273
BstEII	GGTNACC	1 cut(s)	1415
BstENI	CCTNNNNNAGG	1 cut(s)	926
BstF5I	GGATG	9 cut(s)	150, 246, 342, 417, 1488, 1528, 1872, 1984, 2109
BstFNI	CGCG	3 cut(s)	411, 560, 1803
BstHHI	GCGC	4 cut(s)	413, 970, 1538, 1815
BstMAI	GTCTC	5 cut(s)	323, 484, 1050, 1697, 2029
BstMCI	CGRYCG	1 cut(s)	313
BstNI	CCWGG	3 cut(s)	609, 640, 1631
BstNSI	RCATGY	2 cut(s)	968, 2092
BstPI	GGTNACC	1 cut(s)	1415
BstSFI	CTRYAG	1 cut(s)	163
BstSLI	GKGCMC	4 cut(s)	638, 1403, 1461, 2168
BstUI	CGCG	3 cut(s)	411, 560, 1803
BstV1I	GCAGC	4 cut(s)	10, 164, 1525, 1813
BstV2I	GAAGAC	1 cut(s)	1067
BstX2I	RGATCY	2 cut(s)	302, 1072
BstXI	CCANNNNNNTGG	1 cut(s)	1105
BstYI	RGATCY	2 cut(s)	302, 1072
BstZI	CGGCCG	1 cut(s)	310
BtgI	CCRYGG	2 cut(s)	1080, 2273
BtgZI	GCGATG	1 cut(s)	1605
BtrI	CACGTC	1 cut(s)	130
BtsCI	GGATG	9 cut(s)	150, 246, 342, 417, 1488, 1528, 1872, 1984, 2109
BtsI	GCAGTG	1 cut(s)	1330
BtsIMutI	CAGTG	9 cut(s)	292, 1098, 1290, 1330, 1459, 1762, 1883, 1991, 2166
BtuMI	TCGCGA	1 cut(s)	560
CciI	TCATGA	1 cut(s)	255
CfoI	GCGC	4 cut(s)	413, 970, 1538, 1815
Cfr10I	RCCGGY	5 cut(s)	173, 362, 515, 806, 2099
Cfr9I	CCCGGG	1 cut(s)	719
CseI	GACGC	6 cut(s)	368, 442, 653, 664, 1028, 1174
Csp6I	GTAC	9 cut(s)	662, 955, 979, 1141, 1428, 1666, 1933, 2242, 2308
CviQI	GTAC	9 cut(s)	662, 955, 979, 1141, 1428, 1666, 1933, 2242, 2308
DdeI	CTNAG	5 cut(s)	57, 1622, 2080, 2177, 2193
DraIII	CACNNNGTG	1 cut(s)	1456
DrdI	GACNNNNNNGTC	1 cut(s)	452
DseDI	GACNNNNNNGTC	1 cut(s)	452
EaeI	YGGCCR	6 cut(s)	109, 232, 310, 1077, 1095, 1375
EagI	CGGCCG	1 cut(s)	310
Eam1104I	CTCTTC	1 cut(s)	1877
EarI	CTCTTC	1 cut(s)	1877
EciI	GGCGGA	1 cut(s)	1002
Ecl136II	GAGCTC	3 cut(s)	2014, 2142, 2176
EclXI	CGGCCG	1 cut(s)	310
Eco130I	CCWWGG	3 cut(s)	1351, 1783, 2273
Eco24I	GRGCYC	8 cut(s)	207, 726, 1038, 1152, 1898, 2016, 2144, 2178
Eco31I	GGTCTC	1 cut(s)	323
Eco47I	GGWCC	9 cut(s)	223, 316, 465, 565, 919, 1114, 1626, 1702, 1996
Eco52I	CGGCCG	1 cut(s)	310
Eco53kI	GAGCTC	3 cut(s)	2014, 2142, 2176
Eco57I	CTGAAG	4 cut(s)	260, 854, 1079, 1266
Eco72I	CACGTG	1 cut(s)	220
Eco88I	CYCGRG	4 cut(s)	83, 471, 719, 1121
Eco91I	GGTNACC	1 cut(s)	1415
EcoICRI	GAGCTC	3 cut(s)	2014, 2142, 2176
EcoNI	CCTNNNNNAGG	1 cut(s)	926
EcoO109I	RGGNCCY	5 cut(s)	316, 369, 919, 1626, 1702
EcoO65I	GGTNACC	1 cut(s)	1415
EcoRII	CCWGG	3 cut(s)	607, 638, 1629
EcoT14I	CCWWGG	3 cut(s)	1351, 1783, 2273
EcoT38I	GRGCYC	8 cut(s)	207, 726, 1038, 1152, 1898, 2016, 2144, 2178
ErhI	CCWWGG	3 cut(s)	1351, 1783, 2273
FalI	AAGNNNNNCTT	4 cut(s)	80, 112, 1595, 1627
FaqI	GGGAC	7 cut(s)	209, 329, 578, 656, 858, 875, 1100
FauI	CCCGC	1 cut(s)	1229
FbaI	TGATCA	1 cut(s)	1132
Fnu4HI	GCNGC	7 cut(s)	24, 178, 214, 1539, 1551, 1801, 1827
FokI	GGATG	9 cut(s)	137, 233, 329, 404, 1495, 1515, 1859, 1991, 2096
FriOI	GRGCYC	8 cut(s)	207, 726, 1038, 1152, 1898, 2016, 2144, 2178
Fsp4HI	GCNGC	7 cut(s)	24, 178, 214, 1539, 1551, 1801, 1827
FspBI	CTAG	4 cut(s)	320, 395, 536, 1557
GlaI	GCGC	4 cut(s)	412, 969, 1537, 1814
GluI	GCNGC	7 cut(s)	24, 178, 214, 1539, 1551, 1801, 1827
GsuI	CTGGAG	2 cut(s)	1816, 2190
HgaI	GACGC	6 cut(s)	368, 442, 653, 664, 1028, 1174
HhaI	GCGC	4 cut(s)	413, 970, 1538, 1815
Hin1I	GRCGYC	3 cut(s)	360, 675, 1185
Hin6I	GCGC	4 cut(s)	411, 968, 1536, 1813
HinP1I	GCGC	4 cut(s)	411, 968, 1536, 1813
HindIII	AAGCTT	1 cut(s)	1952
HinfI	GANTC	3 cut(s)	764, 871, 990
HphI	GGTGA	8 cut(s)	150, 530, 769, 1255, 1397, 1427, 1931, 2044
Hpy188I	TCNGA	7 cut(s)	127, 302, 358, 436, 769, 1137, 2194
HpyCH4III	ACNGT	6 cut(s)	661, 1427, 1463, 1989, 2038, 2302
HpyCH4IV	ACGT	9 cut(s)	129, 219, 375, 867, 951, 957, 1197, 1430, 2229
HpyF3I	CTNAG	5 cut(s)	57, 1622, 2080, 2177, 2193
HpySE526I	ACGT	9 cut(s)	129, 219, 375, 867, 951, 957, 1197, 1430, 2229
Hsp92I	GRCGYC	3 cut(s)	360, 675, 1185
HspAI	GCGC	4 cut(s)	411, 968, 1536, 1813
KroI	GCCGGC	2 cut(s)	173, 806
KroNI	GCCGGC	2 cut(s)	175, 808
Ksp22I	TGATCA	1 cut(s)	1132
LmnI	GCTCC	8 cut(s)	10, 359, 407, 834, 1033, 1155, 1327, 1797
Lsp1109I	GCAGC	4 cut(s)	10, 164, 1525, 1813
LweI	GCATC	4 cut(s)	270, 426, 1258, 1582
MaeI	CTAG	4 cut(s)	320, 395, 536, 1557
MaeII	ACGT	9 cut(s)	129, 219, 375, 867, 951, 957, 1197, 1430, 2229
MaeIII	GTNAC	5 cut(s)	758, 1415, 1448, 1989, 2032
MboII	GAAGA	7 cut(s)	256, 854, 1072, 1082, 1272, 1894, 2277
MflI	RGATCY	2 cut(s)	302, 1072
MlsI	TGGCCA	2 cut(s)	234, 1097
MluCI	AATT	9 cut(s)	484, 847, 1228, 1489, 1650, 1832, 1899, 2063, 2312
MluNI	TGGCCA	2 cut(s)	234, 1097
MlyI	GAGTC	2 cut(s)	880, 999
MmeI	TCCRAC	9 cut(s)	117, 150, 280, 330, 381, 459, 607, 1579, 2134
Mox20I	TGGCCA	2 cut(s)	234, 1097
MroNI	GCCGGC	2 cut(s)	173, 806
MroXI	GAANNNNTTC	1 cut(s)	1295
MscI	TGGCCA	2 cut(s)	234, 1097
MseI	TTAA	1 cut(s)	2160
MslI	CAYNNNNRTG	2 cut(s)	1103, 1299
Msp20I	TGGCCA	2 cut(s)	234, 1097
Mva1269I	GAATGC	3 cut(s)	647, 1017, 1772
MvaI	CCWGG	3 cut(s)	609, 640, 1631
MvnI	CGCG	3 cut(s)	411, 560, 1803
NaeI	GCCGGC	2 cut(s)	175, 808
NciI	CCSGG	8 cut(s)	314, 426, 720, 721, 1008, 1050, 1502, 1810
NcoI	CCATGG	1 cut(s)	2273
NgoMIV	GCCGGC	2 cut(s)	173, 806
NmeAIII	GCCGAG	1 cut(s)	226
NmuCI	GTSAC	5 cut(s)	758, 1415, 1448, 1989, 2032
NruI	TCGCGA	1 cut(s)	560
NspI	RCATGY	2 cut(s)	968, 2092
OliI	CACNNNNGTG	1 cut(s)	1103
PaeI	GCATGC	1 cut(s)	968
PaeR7I	CTCGAG	1 cut(s)	83
PagI	TCATGA	1 cut(s)	255
PcsI	WCGNNNNNNNCGW	5 cut(s)	225, 345, 354, 450, 732
PctI	GAATGC	3 cut(s)	647, 1017, 1772
PdiI	GCCGGC	2 cut(s)	175, 808
PdmI	GAANNNNTTC	1 cut(s)	1295
PfeI	GAWTC	1 cut(s)	764
PflFI	GACNNNGTC	1 cut(s)	1184
PflMI	CCANNNNNTGG	2 cut(s)	589, 1210
PfoI	TCCNGGA	1 cut(s)	1006
PkrI	GCNGC	7 cut(s)	25, 179, 215, 1540, 1552, 1802, 1828
PleI	GAGTC	2 cut(s)	879, 998
PmaCI	CACGTG	1 cut(s)	220
PmlI	CACGTG	1 cut(s)	220
PpsI	GAGTC	2 cut(s)	879, 998
Ppu21I	YACGTR	4 cut(s)	220, 868, 952, 958
PpuMI	RGGWCCY	4 cut(s)	316, 919, 1626, 1702
Psp124BI	GAGCTC	3 cut(s)	2016, 2144, 2178
Psp5II	RGGWCCY	4 cut(s)	316, 919, 1626, 1702
Psp6I	CCWGG	3 cut(s)	607, 638, 1629
PspCI	CACGTG	1 cut(s)	220
PspEI	GGTNACC	1 cut(s)	1415
PspGI	CCWGG	3 cut(s)	607, 638, 1629
PspPPI	RGGWCCY	4 cut(s)	316, 919, 1626, 1702
PsuI	RGATCY	2 cut(s)	302, 1072
PsyI	GACNNNGTC	1 cut(s)	1184
RruI	TCGCGA	1 cut(s)	560
RsaI	GTAC	9 cut(s)	663, 956, 980, 1142, 1429, 1667, 1934, 2243, 2309
RsaNI	GTAC	9 cut(s)	662, 955, 979, 1141, 1428, 1666, 1933, 2242, 2308
RseI	CAYNNNNRTG	2 cut(s)	1103, 1299
SacI	GAGCTC	3 cut(s)	2016, 2144, 2178
SaqAI	TTAA	1 cut(s)	2160
SatI	GCNGC	7 cut(s)	24, 178, 214, 1539, 1551, 1801, 1827
ScaI	AGTACT	1 cut(s)	1667
SchI	GAGTC	2 cut(s)	880, 999
SfaNI	GCATC	4 cut(s)	270, 426, 1258, 1582
SfcI	CTRYAG	1 cut(s)	163
Sfr274I	CTCGAG	1 cut(s)	83
SgrAI	CRCCGGYG	1 cut(s)	2099
SinI	GGWCC	9 cut(s)	223, 316, 465, 565, 919, 1114, 1626, 1702, 1996
SlaI	CTCGAG	1 cut(s)	83
SmaI	CCCGGG	1 cut(s)	721
SmiMI	CAYNNNNRTG	2 cut(s)	1103, 1299
SmlI	CTYRAG	2 cut(s)	83, 923
SmoI	CTYRAG	2 cut(s)	83, 923
SphI	GCATGC	1 cut(s)	968
Sse9I	AATT	9 cut(s)	484, 847, 1228, 1489, 1650, 1832, 1899, 2063, 2312
SspMI	CTAG	4 cut(s)	320, 395, 536, 1557
SstI	GAGCTC	3 cut(s)	2016, 2144, 2178
StyI	CCWWGG	3 cut(s)	1351, 1783, 2273
TaaI	ACNGT	6 cut(s)	661, 1427, 1463, 1989, 2038, 2302
TaiI	ACGT	9 cut(s)	132, 222, 378, 870, 954, 960, 1200, 1433, 2232
TaqI	TCGA	8 cut(s)	84, 348, 444, 456, 735, 1179, 1266, 1523
TasI	AATT	9 cut(s)	484, 847, 1228, 1489, 1650, 1832, 1899, 2063, 2312
TatI	WGTACW	4 cut(s)	661, 1665, 1932, 2307
TauI	GCSGC	3 cut(s)	216, 1553, 1803
TfiI	GAWTC	1 cut(s)	764
Tru1I	TTAA	1 cut(s)	2160
Tru9I	TTAA	1 cut(s)	2160
TscAI	CASTG	9 cut(s)	299, 1105, 1290, 1337, 1466, 1762, 1883, 1998, 2173
TseFI	GTSAC	5 cut(s)	758, 1415, 1448, 1989, 2032
TseI	GCWGC	4 cut(s)	23, 177, 1538, 1826
Tsp45I	GTSAC	5 cut(s)	758, 1415, 1448, 1989, 2032
TspDTI	ATGAA	3 cut(s)	244, 806, 1333
TspGWI	ACGGA	2 cut(s)	516, 1159
TspMI	CCCGGG	1 cut(s)	719
TspRI	CASTG	9 cut(s)	299, 1105, 1290, 1337, 1466, 1762, 1883, 1998, 2173
Tth111I	GACNNNGTC	1 cut(s)	1184
Van91I	CCANNNNNTGG	2 cut(s)	589, 1210
VneI	GTGCAC	3 cut(s)	634, 1399, 1457
VpaK11BI	GGWCC	9 cut(s)	223, 316, 465, 565, 919, 1114, 1626, 1702, 1996
XagI	CCTNNNNNAGG	1 cut(s)	926
XapI	RAATTY	2 cut(s)	1832, 2312
XbaI	TCTAGA	1 cut(s)	394
XceI	RCATGY	2 cut(s)	968, 2092
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1883
XhoI	CTCGAG	1 cut(s)	83
XmaI	CCCGGG	1 cut(s)	719
XmnI	GAANNNNTTC	1 cut(s)	1295
XspI	CTAG	4 cut(s)	320, 395, 536, 1557
ZrmI	AGTACT	1 cut(s)	1667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.